Tan0004772 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGCGGATCAAACAGCCAAAACCCTAACCAGAAATCACGGGGAAATTTTAATTACAAAAATCTGTTCAATCTGGAGGGAAAAAAAGGAAAAGAGGAAGAAATAGAAATTAAAAACTCTGGCAGAGCATTGCTTTTCGACTCAGAGCATCTTCTTTCGCGATTGGCAGTTTATTCATGGAAAGCGGCGGCAAAGGGAGAGAGGAAGAACAAGACGGCATGTCTGTACACTCTCCATGCAAAGCTCCACCGTCCTCCGCTTCCTCTCTTCCCAAGGTCTCTCTCTCTCTCTATCTCTTCAGACATTGCCTTATAACCGCCGGAATTTGATTTTGTTCTTGTTGTTGGTATGTTGTGGTTAGGAGCAACCACAGATTGAATTGGAACTCAAACTCTTGCAAGCTCTTGAAATTTATCCACTAGTTAAACTACAAGGCAAGTTTCCTTAACAATATTCTATCTGATTTGTAATTGTTTCTAATATCAAAACGCGAGTACTTTATCAGTTTTTGAGTCGTTCATCCTCAGCACAATCGTCGCTGAATTTTTTTATTATTTCGGTTAATAAGTGAGACTTTAACCTATTTCCTATTTGCGGATTCAGTGATAAATTTGTCTTCCGGAATACCATTCTGTTTTTCACTTAAGGCTTTTACCGATTAAGAATAGGGAGGAAATGTTGTGAACTGAATATGCTATAATAAATTAAATCACATAATCTCGTACCACTATCGAGAACTTAAAGCAGTCAATTCTCGTCATCTTAGGGTGCTCATTCTTAGACTCGCAATGAAAGGAAATAAACTTTGATGTATTTGCTCATGATCCAAATGATGTCTTTTTTTTCCTCTTCTGTATACGAGCTTGCTGTCAAAGAATTATCATTATTTTTCATACAGGCATTCATCGCCATTTTGTCCTCTATGGGTTGATGGAATTTCTGCGAAGAAGGTTTTCTCTGCTCCATGTACCACCTTCTTTCATATATTTTATTGAGCTTTGACGATAAAATTTAGTGGCTTCTACGGTTTCTTTTTGTGTAATATTGGTTTACCATCTTCATGTCACAGCTTTGATCGTCAGTTCTCTTCTGATGAGGTTCTACAGTTGTTGGATCGGTTCTATAACCTGGAAATGCTGGTAAAAAAAAAAAATCACCAATGCTTATTTTTGTTTTTCCTTGTTTCTTTTTTTGGTTGCTGGCTTCATTTGATTTGAAAAGGAGGATAATCTAAATAGCACAAATATATATAAGCTAGAAAATTCACTTTTCTTGCATTCACTCTTTTTGGAAGAAAAATTTACTAATTCCTAATAATCATATTTATTCTGGAAGGCCTTGAATTTGTGAATGTTTAGGTACATACTTAGTAAGGATCTGATTTCACATCTGACCTGATAGACATCATATTCACTTTCTTTCTAAAGAAGATATCATTTCCAGCTTGATTAGAAAATATGTCTAAAGCTTTGTCGACATATTGATTTTTTCTCTTTTGAAGAGTTAGAACCAAAGAACGTGGGGGCAAGTCTTATTTCTTTTACCACTCCTAAGTCATCCTTTCTTTGTCCTCCTTTTGATAACTGATGAGATATATGTGCTAATATTGCTTTCCTCTCCATCACACTGTATTTCAGAAGCCAGATGATGAGGAAATGGAAATTCTGAATCACGAGGAAGATTTTTGCTTACCACAAACCTTCTTTGTCAAAGAAGAGTCTTAAGGGAAATTGTTCATATGGATTAGTAACTTAGCACTTCCTGGTATATGATAGTTTTATTAATTTTATCTACCATCGTTCCCTTTTTGTTTTGTAAATGTCAATATAGAATCTTTTGCTGGTTAGTATAATTCAAAATTTTCAAGGATGAATTCTTTAGTGCCTATACACGAGGGGATCTACTTAATTGAGCTGAG CGCGGATCAAACAGCCAAAACCCTAACCAGAAATCACGGGGAAATTTTAATTACAAAAATCTGTTCAATCTGGAGGGAAAAAAAGGAAAAGAGGAAGAAATAGAAATTAAAAACTCTGGCAGAGCATTGCTTTTCGACTCAGAGCATCTTCTTTCGCGATTGGCAGTTTATTCATGGAAAGCGGCGGCAAAGGGAGAGAGGAAGAACAAGACGGCATGTCTGTACACTCTCCATGCAAAGCTCCACCGTCCTCCGCTTCCTCTCTTCCCAAGGAGCAACCACAGATTGAATTGGAACTCAAACTCTTGCAAGCTCTTGAAATTTATCCACTAGTTAAACTACAAGGCATTCATCGCCATTTTGTCCTCTATGGGTTGATGGAATTTCTGCGAAGAAGCTTTGATCGTCAGTTCTCTTCTGATGAGGTTCTACAGTTGTTGGATCGGTTCTATAACCTGGAAATGCTGAAGCCAGATGATGAGGAAATGGAAATTCTGAATCACGAGGAAGATTTTTGCTTACCACAAACCTTCTTTGTCAAAGAAGAGTCTTAAGGGAAATTGTTCATATGGATTAGTAACTTAGCACTTCCTGGTATATGATAGTTTTATTAATTTTATCTACCATCGTTCCCTTTTTGTTTTGTAAATGTCAATATAGAATCTTTTGCTGGTTAGTATAATTCAAAATTTTCAAGGATGAATTCTTTAGTGCCTATACACGAGGGGATCTACTTAATTGAGCTGAG ATGGAAAGCGGCGGCAAAGGGAGAGAGGAAGAACAAGACGGCATGTCTGTACACTCTCCATGCAAAGCTCCACCGTCCTCCGCTTCCTCTCTTCCCAAGGAGCAACCACAGATTGAATTGGAACTCAAACTCTTGCAAGCTCTTGAAATTTATCCACTAGTTAAACTACAAGGCATTCATCGCCATTTTGTCCTCTATGGGTTGATGGAATTTCTGCGAAGAAGCTTTGATCGTCAGTTCTCTTCTGATGAGGTTCTACAGTTGTTGGATCGGTTCTATAACCTGGAAATGCTGAAGCCAGATGATGAGGAAATGGAAATTCTGAATCACGAGGAAGATTTTTGCTTACCACAAACCTTCTTTGTCAAAGAAGAGTCTTAA MESGGKGREEEQDGMSVHSPCKAPPSSASSLPKEQPQIELELKLLQALEIYPLVKLQGIHRHFVLYGLMEFLRRSFDRQFSSDEVLQLLDRFYNLEMLKPDDEEMEILNHEEDFCLPQTFFVKEES Homology
BLAST of Tan0004772 vs. NCBI nr
Match: XP_038893367.1 (uncharacterized protein LOC120082183 [Benincasa hispida]) HSP 1 Score: 246.9 bits (629), Expect = 9.3e-62 Identity = 125/126 (99.21%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of Tan0004772 vs. NCBI nr
Match: XP_008446430.1 (PREDICTED: uncharacterized protein LOC103489178 [Cucumis melo]) HSP 1 Score: 245.4 bits (625), Expect = 2.7e-61 Identity = 124/126 (98.41%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of Tan0004772 vs. NCBI nr
Match: XP_004135149.1 (uncharacterized protein LOC101212766 isoform X2 [Cucumis sativus] >KGN51973.1 hypothetical protein Csa_008415 [Cucumis sativus]) HSP 1 Score: 243.4 bits (620), Expect = 1.0e-60 Identity = 123/126 (97.62%), Postives = 125/126 (99.21%), Query Frame = 0
BLAST of Tan0004772 vs. NCBI nr
Match: XP_022945110.1 (uncharacterized protein LOC111449449 [Cucurbita moschata] >XP_023541772.1 uncharacterized protein LOC111801826 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 242.7 bits (618), Expect = 1.8e-60 Identity = 123/126 (97.62%), Postives = 125/126 (99.21%), Query Frame = 0
BLAST of Tan0004772 vs. NCBI nr
Match: XP_022968533.1 (uncharacterized protein LOC111467738 [Cucurbita maxima]) HSP 1 Score: 241.9 bits (616), Expect = 3.0e-60 Identity = 122/126 (96.83%), Postives = 125/126 (99.21%), Query Frame = 0
BLAST of Tan0004772 vs. ExPASy TrEMBL
Match: A0A1S3BFV8 (uncharacterized protein LOC103489178 OS=Cucumis melo OX=3656 GN=LOC103489178 PE=3 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 1.3e-61 Identity = 124/126 (98.41%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of Tan0004772 vs. ExPASy TrEMBL
Match: A0A0A0KQU2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606640 PE=3 SV=1) HSP 1 Score: 243.4 bits (620), Expect = 5.0e-61 Identity = 123/126 (97.62%), Postives = 125/126 (99.21%), Query Frame = 0
BLAST of Tan0004772 vs. ExPASy TrEMBL
Match: A0A6J1FZZ7 (uncharacterized protein LOC111449449 OS=Cucurbita moschata OX=3662 GN=LOC111449449 PE=3 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 8.5e-61 Identity = 123/126 (97.62%), Postives = 125/126 (99.21%), Query Frame = 0
BLAST of Tan0004772 vs. ExPASy TrEMBL
Match: A0A6J1HYA5 (uncharacterized protein LOC111467738 OS=Cucurbita maxima OX=3661 GN=LOC111467738 PE=3 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 1.4e-60 Identity = 122/126 (96.83%), Postives = 125/126 (99.21%), Query Frame = 0
BLAST of Tan0004772 vs. ExPASy TrEMBL
Match: A0A6J1J1E0 (uncharacterized protein LOC111482526 OS=Cucurbita maxima OX=3661 GN=LOC111482526 PE=3 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 5.5e-60 Identity = 122/126 (96.83%), Postives = 124/126 (98.41%), Query Frame = 0
BLAST of Tan0004772 vs. TAIR 10
Match: AT1G26470.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, H4/H2A histone acetyltransferase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CT20 (InterPro:IPR012423); Has 60 Blast hits to 60 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 2; Plants - 30; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 194.9 bits (494), Expect = 3.9e-50 Identity = 98/122 (80.33%), Postives = 112/122 (91.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|