Tan0004748 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCAGACCTCCTGTCCACCGCAACGCCCTCGCCTTCGAAACTACTCCGACCATCAAGTTCCTCTGCAGCTACGGCGGCAAGATCCTCCCTCGTTATCCCGACGGCAAACTCCGCTATCACGGTGGCGAAACCCGTCTTCTTGCTGTCAACCGCTCCATTTCCTTCTCTGGTAACCGCTTTCTCTCTCTCACTCCCCACTAATTTCTAATTCTAGTTCTCGATTGATTAGATTAGGGTTTTAAATCTGAAATTTCTGTCTGCTTCAACAGAGCTCTTGTTGAAGTTCGGGGAGCTCTGCGGAACGCCAATTTCTGTGAGCTTTCGTTGCCAATTTCCTAGAGAAGACCTCGATGCTCTCGTCTCCATCACCTCCGATGAAGATCTGGCGAATCTCATCGAGGAATACGATCGAGCGGCTTCACCTTCCTCATCGTTGAAGATCAGAGCATTCCTTTCCCCTCCGAAATATGCCAAAAGAATCTCTCCTCCTTCTTCAATGCCTTCATTCGCCTCCTCCACGTCATCGATGTCGGTGGCTCATCGCTGCTTTCGTCGGATGTCACCGCCTAATCCTTTCTACTTGGAGAGATCTGCGTTGGCCGTTCCTCTCAGTGTCTATAATGTTCAGGGAAGCTCTAGCCACATGTTCATCCACAATGGTAACAGCTGGGAATAACACCAATTCTTCCAACAGGGGAGCCGAATAGCCAAACGAAAGCTACATCAATTGAACTCTATATATTTTTCACAGAAAGGAAACTAAAATTAAAAGTACTCAAAGAGAGGCCAATACAATGTAATTGTCCTGTAAATTGCTGCCATTAATGAATTTTCACTCCAATTTCGCTATGGATCCCAACTTTATGCTGTGGTGAGTTTGAGTTGGTTCTTCTTCAATCTTCTTAGCGTGTTTGCTTTACCACTTCCCCCGCCGTCGTTTAACCTCCACCGTGATAAGCAAAAGTGTCACACCAATAACTAGTCCCCTCCCCTGCTTGTTTATCTGTTTTGTGTGACTGAAGAAGAAACAGATGTTATTAGGCAACTTCAGCATCTTTTCCCCTGCTGTTCTTTCTGTCATTAAATATGTCCAAAGCTTATTATTCCCTGTTTTGAAATCTTTTGCAGGAGTTGGCCTAGAGATTCTCGTGGTTGGACTCGGAGAGGAAGCTGCCGGGATGAATGAGTAA ATGGGCAGACCTCCTGTCCACCGCAACGCCCTCGCCTTCGAAACTACTCCGACCATCAAGTTCCTCTGCAGCTACGGCGGCAAGATCCTCCCTCGTTATCCCGACGGCAAACTCCGCTATCACGGTGGCGAAACCCGTCTTCTTGCTGTCAACCGCTCCATTTCCTTCTCTGAGCTCTTGTTGAAGTTCGGGGAGCTCTGCGGAACGCCAATTTCTGTGAGCTTTCGTTGCCAATTTCCTAGAGAAGACCTCGATGCTCTCGTCTCCATCACCTCCGATGAAGATCTGGCGAATCTCATCGAGGAATACGATCGAGCGGCTTCACCTTCCTCATCGTTGAAGATCAGAGCATTCCTTTCCCCTCCGAAATATGCCAAAAGAATCTCTCCTCCTTCTTCAATGCCTTCATTCGCCTCCTCCACGTCATCGATGTCGGTGGCTCATCGCTGCTTTCGTCGGATGTCACCGCCTAATCCTTTCTACTTGGAGAGATCTGCGTTGGCCGTTCCTCTCAGTATTCTCGTGGTTGGACTCGGAGAGGAAGCTGCCGGGATGAATGAGTAA ATGGGCAGACCTCCTGTCCACCGCAACGCCCTCGCCTTCGAAACTACTCCGACCATCAAGTTCCTCTGCAGCTACGGCGGCAAGATCCTCCCTCGTTATCCCGACGGCAAACTCCGCTATCACGGTGGCGAAACCCGTCTTCTTGCTGTCAACCGCTCCATTTCCTTCTCTGAGCTCTTGTTGAAGTTCGGGGAGCTCTGCGGAACGCCAATTTCTGTGAGCTTTCGTTGCCAATTTCCTAGAGAAGACCTCGATGCTCTCGTCTCCATCACCTCCGATGAAGATCTGGCGAATCTCATCGAGGAATACGATCGAGCGGCTTCACCTTCCTCATCGTTGAAGATCAGAGCATTCCTTTCCCCTCCGAAATATGCCAAAAGAATCTCTCCTCCTTCTTCAATGCCTTCATTCGCCTCCTCCACGTCATCGATGTCGGTGGCTCATCGCTGCTTTCGTCGGATGTCACCGCCTAATCCTTTCTACTTGGAGAGATCTGCGTTGGCCGTTCCTCTCAGTATTCTCGTGGTTGGACTCGGAGAGGAAGCTGCCGGGATGAATGAGTAA MGRPPVHRNALAFETTPTIKFLCSYGGKILPRYPDGKLRYHGGETRLLAVNRSISFSELLLKFGELCGTPISVSFRCQFPREDLDALVSITSDEDLANLIEEYDRAASPSSSLKIRAFLSPPKYAKRISPPSSMPSFASSTSSMSVAHRCFRRMSPPNPFYLERSALAVPLSILVVGLGEEAAGMNE Homology
BLAST of Tan0004748 vs. NCBI nr
Match: XP_004142964.1 (uncharacterized protein LOC101207008 [Cucumis sativus] >XP_031736384.1 uncharacterized protein LOC101207008 [Cucumis sativus] >KGN62323.1 hypothetical protein Csa_018615 [Cucumis sativus]) HSP 1 Score: 302.4 bits (773), Expect = 2.8e-78 Identity = 149/173 (86.13%), Postives = 158/173 (91.33%), Query Frame = 0
BLAST of Tan0004748 vs. NCBI nr
Match: KAG6598239.1 (hypothetical protein SDJN03_08017, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 300.4 bits (768), Expect = 1.1e-77 Identity = 149/173 (86.13%), Postives = 158/173 (91.33%), Query Frame = 0
BLAST of Tan0004748 vs. NCBI nr
Match: XP_022961752.1 (uncharacterized protein LOC111462427 [Cucurbita moschata]) HSP 1 Score: 297.4 bits (760), Expect = 8.9e-77 Identity = 150/176 (85.23%), Postives = 159/176 (90.34%), Query Frame = 0
BLAST of Tan0004748 vs. NCBI nr
Match: XP_023545452.1 (uncharacterized protein LOC111804876 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 292.7 bits (748), Expect = 2.2e-75 Identity = 150/177 (84.75%), Postives = 159/177 (89.83%), Query Frame = 0
BLAST of Tan0004748 vs. NCBI nr
Match: XP_022996772.1 (uncharacterized protein LOC111491906 [Cucurbita maxima]) HSP 1 Score: 291.6 bits (745), Expect = 4.9e-75 Identity = 148/175 (84.57%), Postives = 156/175 (89.14%), Query Frame = 0
BLAST of Tan0004748 vs. ExPASy TrEMBL
Match: A0A0A0LKJ2 (PB1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G349080 PE=4 SV=1) HSP 1 Score: 302.4 bits (773), Expect = 1.3e-78 Identity = 149/173 (86.13%), Postives = 158/173 (91.33%), Query Frame = 0
BLAST of Tan0004748 vs. ExPASy TrEMBL
Match: A0A6J1HAZ2 (uncharacterized protein LOC111462427 OS=Cucurbita moschata OX=3662 GN=LOC111462427 PE=4 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 4.3e-77 Identity = 150/176 (85.23%), Postives = 159/176 (90.34%), Query Frame = 0
BLAST of Tan0004748 vs. ExPASy TrEMBL
Match: A0A6J1K2Y4 (uncharacterized protein LOC111491906 OS=Cucurbita maxima OX=3661 GN=LOC111491906 PE=4 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 2.4e-75 Identity = 148/175 (84.57%), Postives = 156/175 (89.14%), Query Frame = 0
BLAST of Tan0004748 vs. ExPASy TrEMBL
Match: A0A6J1BRT0 (uncharacterized protein LOC111005121 OS=Momordica charantia OX=3673 GN=LOC111005121 PE=4 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 2.1e-60 Identity = 133/175 (76.00%), Postives = 144/175 (82.29%), Query Frame = 0
BLAST of Tan0004748 vs. ExPASy TrEMBL
Match: A0A5J5AHC4 (PB1 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_034266 PE=4 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 5.7e-53 Identity = 118/162 (72.84%), Postives = 133/162 (82.10%), Query Frame = 0
BLAST of Tan0004748 vs. TAIR 10
Match: AT3G26510.3 (Octicosapeptide/Phox/Bem1p family protein ) HSP 1 Score: 168.3 bits (425), Expect = 5.8e-42 Identity = 96/156 (61.54%), Postives = 111/156 (71.15%), Query Frame = 0
BLAST of Tan0004748 vs. TAIR 10
Match: AT3G26510.1 (Octicosapeptide/Phox/Bem1p family protein ) HSP 1 Score: 168.3 bits (425), Expect = 5.8e-42 Identity = 96/156 (61.54%), Postives = 111/156 (71.15%), Query Frame = 0
BLAST of Tan0004748 vs. TAIR 10
Match: AT3G26510.2 (Octicosapeptide/Phox/Bem1p family protein ) HSP 1 Score: 168.3 bits (425), Expect = 5.8e-42 Identity = 96/156 (61.54%), Postives = 111/156 (71.15%), Query Frame = 0
BLAST of Tan0004748 vs. TAIR 10
Match: AT3G26510.4 (Octicosapeptide/Phox/Bem1p family protein ) HSP 1 Score: 168.3 bits (425), Expect = 5.8e-42 Identity = 96/156 (61.54%), Postives = 111/156 (71.15%), Query Frame = 0
BLAST of Tan0004748 vs. TAIR 10
Match: AT1G70640.1 (octicosapeptide/Phox/Bem1p (PB1) domain-containing protein ) HSP 1 Score: 153.3 bits (386), Expect = 1.9e-37 Identity = 85/158 (53.80%), Postives = 106/158 (67.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|