Tan0004716 (gene) Snake gourd v1

Overview


Name	Tan0004716
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Maternal effect embryo arrest
Location	LG11: 1858606 .. 1859454 (-)
RNA-Seq Expression	Tan0004716
Synteny	Tan0004716

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTTCCGACAGGAACAAGTGCGCAATTTTTTCTTCCAATCGTTTCTCACCTTTTTCAATTCCTTTACCCACTTTACCAATCGCCTCCACTACGAGCTTCAATCAATCCCCATCTCCACTCCACTCCCGCCGGAATCCGCCATTCCTCCGCCGTCTGAAGAATGCCGACCGGCACCAGCATTCACATGTCAGCCCTAGACGGGATCGTAAACGTCAATTCCATGTTCACTCTCGCCGTCTTCTTAGGCTTAGCCTGGAACCCCAACGATCCAACGAACAATCTCGTCGAAAGCCCTAATTGCTTGGCCGGACCTTCCGTCGCGGAGAATCTCGTCGCCTTCCATGTCTATTCCTTCAGCTCCTTCCTCTTCTCCAGCTTAATCGCCCTGGGCCTCAAGCAGGCCATTCGGATCTCGAAAAGCCCTTTTTATCACCCGACCGAGTTCTTCGTTCGAGTGAACAAAACGGCGGTCCGAATCGGGATGCTGGTTTCGGGAATCGGCTCGGTTTGCGGGTGTGGATTCCTTATGATGGCGCTCATCAATGTTGTTCAGATCAAACTTGGTACTCTGAGCTGCGGCAGCTCTCAGACTTACGCGGCGGTAGTTCCGCTCGTGATTTTGGTTCCATTTGCCCTTGTGATTTACATCTGCCTTGTTTCTTACGCTTTCATCAATTAGATCGTTGTGTGTTTCCTGAATATACGGCGATTCTTGATTTCCATTTGACGTTGATTTGTGTTGCGTGAAGTCTTACGAATGAGTACCCATTACCATTACCATTATCAGAGGAATTCTAATCCTTATTTTAGTGTTTCAGTATTCTTATCATATCAATCTTCTCGTGGG

mRNA sequence

TTTCTTCCGACAGGAACAAGTGCGCAATTTTTTCTTCCAATCGTTTCTCACCTTTTTCAATTCCTTTACCCACTTTACCAATCGCCTCCACTACGAGCTTCAATCAATCCCCATCTCCACTCCACTCCCGCCGGAATCCGCCATTCCTCCGCCGTCTGAAGAATGCCGACCGGCACCAGCATTCACATGTCAGCCCTAGACGGGATCGTAAACGTCAATTCCATGTTCACTCTCGCCGTCTTCTTAGGCTTAGCCTGGAACCCCAACGATCCAACGAACAATCTCGTCGAAAGCCCTAATTGCTTGGCCGGACCTTCCGTCGCGGAGAATCTCGTCGCCTTCCATGTCTATTCCTTCAGCTCCTTCCTCTTCTCCAGCTTAATCGCCCTGGGCCTCAAGCAGGCCATTCGGATCTCGAAAAGCCCTTTTTATCACCCGACCGAGTTCTTCGTTCGAGTGAACAAAACGGCGGTCCGAATCGGGATGCTGGTTTCGGGAATCGGCTCGGTTTGCGGGTGTGGATTCCTTATGATGGCGCTCATCAATGTTGTTCAGATCAAACTTGGTACTCTGAGCTGCGGCAGCTCTCAGACTTACGCGGCGGTAGTTCCGCTCGTGATTTTGGTTCCATTTGCCCTTGTGATTTACATCTGCCTTGTTTCTTACGCTTTCATCAATTAGATCGTTGTGTGTTTCCTGAATATACGGCGATTCTTGATTTCCATTTGACGTTGATTTGTGTTGCGTGAAGTCTTACGAATGAGTACCCATTACCATTACCATTATCAGAGGAATTCTAATCCTTATTTTAGTGTTTCAGTATTCTTATCATATCAATCTTCTCGTGGG

Coding sequence (CDS)

ATGCCGACCGGCACCAGCATTCACATGTCAGCCCTAGACGGGATCGTAAACGTCAATTCCATGTTCACTCTCGCCGTCTTCTTAGGCTTAGCCTGGAACCCCAACGATCCAACGAACAATCTCGTCGAAAGCCCTAATTGCTTGGCCGGACCTTCCGTCGCGGAGAATCTCGTCGCCTTCCATGTCTATTCCTTCAGCTCCTTCCTCTTCTCCAGCTTAATCGCCCTGGGCCTCAAGCAGGCCATTCGGATCTCGAAAAGCCCTTTTTATCACCCGACCGAGTTCTTCGTTCGAGTGAACAAAACGGCGGTCCGAATCGGGATGCTGGTTTCGGGAATCGGCTCGGTTTGCGGGTGTGGATTCCTTATGATGGCGCTCATCAATGTTGTTCAGATCAAACTTGGTACTCTGAGCTGCGGCAGCTCTCAGACTTACGCGGCGGTAGTTCCGCTCGTGATTTTGGTTCCATTTGCCCTTGTGATTTACATCTGCCTTGTTTCTTACGCTTTCATCAATTAG

Protein sequence

MPTGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAGPSVAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN

Homology

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BLAST of Tan0004716 vs. NCBI nr
Match: XP_022990564.1 (uncharacterized protein LOC111487406 [Cucurbita maxima] >XP_023515774.1 uncharacterized protein LOC111779812 [Cucurbita pepo subsp. pepo] >KAG6602640.1 hypothetical protein SDJN03_07873, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033327.1 hypothetical protein SDJN02_07382, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 326.6 bits (836), Expect = 1.3e-85
Identity = 168/172 (97.67%), Postives = 171/172 (99.42%), Query Frame = 0


Query: 1   MPTGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAGPSVAENLVAF 60
           MPTGT+IHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLA P+VAENLVAF
Sbjct: 1   MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAF 60

Query: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRISK+PFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG
Sbjct: 61  HVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG 120

Query: 121 FLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN 173
           FLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN
Sbjct: 121 FLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN 172

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BLAST of Tan0004716 vs. NCBI nr
Match: XP_022962637.1 (uncharacterized protein LOC111463051 [Cucurbita moschata])

HSP 1 Score: 325.9 bits (834), Expect = 2.1e-85
Identity = 168/172 (97.67%), Postives = 171/172 (99.42%), Query Frame = 0


Query: 1   MPTGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAGPSVAENLVAF 60
           MPTGT+IHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLA P+VAENLVAF
Sbjct: 1   MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLATPNVAENLVAF 60

Query: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRISK+PFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG
Sbjct: 61  HVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG 120

Query: 121 FLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN 173
           FLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN
Sbjct: 121 FLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN 172

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BLAST of Tan0004716 vs. NCBI nr
Match: XP_038885575.1 (uncharacterized protein LOC120075905 [Benincasa hispida])

HSP 1 Score: 321.2 bits (822), Expect = 5.3e-84
Identity = 164/172 (95.35%), Postives = 169/172 (98.26%), Query Frame = 0


Query: 1   MPTGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAGPSVAENLVAF 60
           MP GTSIH+SALDGIVNVNSMFTLAVFLGLAWNPNDPTNNL++SPNCLAGPSVA NLVAF
Sbjct: 1   MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLIQSPNCLAGPSVAANLVAF 60

Query: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKTAVR+GMLVSGIGSVCGCG
Sbjct: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKTAVRVGMLVSGIGSVCGCG 120

Query: 121 FLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN 173
           FLMMALINVVQIKLG LSCGSSQT+AAVVPLVILVPFALVIYICLVSYAFIN
Sbjct: 121 FLMMALINVVQIKLGVLSCGSSQTFAAVVPLVILVPFALVIYICLVSYAFIN 172

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BLAST of Tan0004716 vs. NCBI nr
Match: XP_022134461.1 (uncharacterized protein LOC111006700 [Momordica charantia])

HSP 1 Score: 316.6 bits (810), Expect = 1.3e-82
Identity = 160/172 (93.02%), Postives = 169/172 (98.26%), Query Frame = 0


Query: 1   MPTGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAGPSVAENLVAF 60
           MP GTSIH+SALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLV++PNCLA PS+AENLVAF
Sbjct: 54  MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAF 113

Query: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNK+A+RIGML+SGIGSVCGCG
Sbjct: 114 HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKSALRIGMLISGIGSVCGCG 173

Query: 121 FLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN 173
           FLMMALINVVQIKLGTLSCGSSQT+AAVVPLVILVP AL+IYICLVSYAFIN
Sbjct: 174 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIIYICLVSYAFIN 225

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BLAST of Tan0004716 vs. NCBI nr
Match: XP_004138443.1 (uncharacterized protein LOC101208865 [Cucumis sativus])

HSP 1 Score: 316.6 bits (810), Expect = 1.3e-82
Identity = 160/172 (93.02%), Postives = 169/172 (98.26%), Query Frame = 0


Query: 1   MPTGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAGPSVAENLVAF 60
           MPTGTSIH+SALDGIVNVNSMFTLAVFLGLAWNPNDP NNL++SPNCLAGPSVA NLV+F
Sbjct: 1   MPTGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPNCLAGPSVAANLVSF 60

Query: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRI+KSPFYHPTEFF+RVNKTA+RIGMLVSGIGSVCGCG
Sbjct: 61  HVYSFSSFLFSSLIALGLKQAIRIAKSPFYHPTEFFIRVNKTALRIGMLVSGIGSVCGCG 120

Query: 121 FLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN 173
           FLMMALINVVQIKLGTLSCGSSQT+AAVVPLVILVP ALV+YICLVSYAFIN
Sbjct: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALVVYICLVSYAFIN 172

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BLAST of Tan0004716 vs. ExPASy TrEMBL
Match: A0A6J1JSD7 (uncharacterized protein LOC111487406 OS=Cucurbita maxima OX=3661 GN=LOC111487406 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 6.1e-86
Identity = 168/172 (97.67%), Postives = 171/172 (99.42%), Query Frame = 0


Query: 1   MPTGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAGPSVAENLVAF 60
           MPTGT+IHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLA P+VAENLVAF
Sbjct: 1   MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAF 60

Query: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRISK+PFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG
Sbjct: 61  HVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG 120

Query: 121 FLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN 173
           FLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN
Sbjct: 121 FLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN 172

[Close]

BLAST of Tan0004716 vs. ExPASy TrEMBL
Match: A0A6J1HD70 (uncharacterized protein LOC111463051 OS=Cucurbita moschata OX=3662 GN=LOC111463051 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 1.0e-85
Identity = 168/172 (97.67%), Postives = 171/172 (99.42%), Query Frame = 0


Query: 1   MPTGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAGPSVAENLVAF 60
           MPTGT+IHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLA P+VAENLVAF
Sbjct: 1   MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLATPNVAENLVAF 60

Query: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRISK+PFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG
Sbjct: 61  HVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG 120

Query: 121 FLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN 173
           FLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN
Sbjct: 121 FLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN 172

[Close]

BLAST of Tan0004716 vs. ExPASy TrEMBL
Match: A0A0A0KA88 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G008850 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 6.3e-83
Identity = 160/172 (93.02%), Postives = 169/172 (98.26%), Query Frame = 0


Query: 1   MPTGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAGPSVAENLVAF 60
           MPTGTSIH+SALDGIVNVNSMFTLAVFLGLAWNPNDP NNL++SPNCLAGPSVA NLV+F
Sbjct: 1   MPTGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPNCLAGPSVAANLVSF 60

Query: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRI+KSPFYHPTEFF+RVNKTA+RIGMLVSGIGSVCGCG
Sbjct: 61  HVYSFSSFLFSSLIALGLKQAIRIAKSPFYHPTEFFIRVNKTALRIGMLVSGIGSVCGCG 120

Query: 121 FLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN 173
           FLMMALINVVQIKLGTLSCGSSQT+AAVVPLVILVP ALV+YICLVSYAFIN
Sbjct: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALVVYICLVSYAFIN 172

[Close]

BLAST of Tan0004716 vs. ExPASy TrEMBL
Match: A0A6J1BXU9 (uncharacterized protein LOC111006700 OS=Momordica charantia OX=3673 GN=LOC111006700 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 6.3e-83
Identity = 160/172 (93.02%), Postives = 169/172 (98.26%), Query Frame = 0


Query: 1   MPTGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAGPSVAENLVAF 60
           MP GTSIH+SALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLV++PNCLA PS+AENLVAF
Sbjct: 54  MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAF 113

Query: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNK+A+RIGML+SGIGSVCGCG
Sbjct: 114 HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKSALRIGMLISGIGSVCGCG 173

Query: 121 FLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN 173
           FLMMALINVVQIKLGTLSCGSSQT+AAVVPLVILVP AL+IYICLVSYAFIN
Sbjct: 174 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIIYICLVSYAFIN 225

[Close]

BLAST of Tan0004716 vs. ExPASy TrEMBL
Match: A0A5D3DL39 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001250 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.4e-82
Identity = 160/172 (93.02%), Postives = 168/172 (97.67%), Query Frame = 0


Query: 1   MPTGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAGPSVAENLVAF 60
           MPTGTSIH+SALDGIVNVNSMFTLAVFLGLAWNPNDP NNL++SP+CLAGPSVA NLVAF
Sbjct: 1   MPTGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPSCLAGPSVAANLVAF 60

Query: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEF +RVNKTA+RIGMLVSGIGSVCGCG
Sbjct: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFLIRVNKTALRIGMLVSGIGSVCGCG 120

Query: 121 FLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN 173
           FLMMALINVVQIKLGTLSCGSSQT+AAVVPLVILVP ALV+YICLVSYAFIN
Sbjct: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALVVYICLVSYAFIN 172

[Close]

BLAST of Tan0004716 vs. TAIR 10
Match: AT5G05950.1 (maternal effect embryo arrest 60 )

HSP 1 Score: 225.3 bits (573), Expect = 3.7e-59
Identity = 121/173 (69.94%), Postives = 143/173 (82.66%), Query Frame = 0


Query: 5   TSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAGPSVAENLVAFHVYS 64
           TSIH++ALDGIVNVNS+FTLAVF+GLAWNP DP N+LV  PNC+    +AENLVAFHVYS
Sbjct: 3   TSIHITALDGIVNVNSLFTLAVFIGLAWNPTDPDNSLVTDPNCVPTARMAENLVAFHVYS 62

Query: 65  FSSFLFSSLIALGLKQAIRISKSPFYH------PTEFFVRVNKTAVRIGMLVSGIGSVCG 124
           F+SFLFSSLIALGLKQA+R++ +  +H      P  ++  VNKTA+R GM+ SG+GSVCG
Sbjct: 63  FASFLFSSLIALGLKQAMRLNIASSFHISTRIDPVVYY--VNKTALRFGMVTSGLGSVCG 122

Query: 125 CGFLMMALINVVQIKLGTLSCGSS-QTYAAVVPLVILVPFALVIYICLVSYAF 171
           CGFLM+ALINVVQIKLGTL CG+S  TYAAVVPLVILVP AL IY+ L+ YAF
Sbjct: 123 CGFLMLALINVVQIKLGTLGCGASGHTYAAVVPLVILVPSALFIYVSLMLYAF 173

[Close]

BLAST of Tan0004716 vs. TAIR 10
Match: AT3G46890.1 (BEST Arabidopsis thaliana protein match is: maternal effect embryo arrest 60 (TAIR:AT5G05950.1); Has 124 Blast hits to 124 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 144.1 bits (362), Expect = 1.1e-34
Identity = 97/189 (51.32%), Postives = 128/189 (67.72%), Query Frame = 0


Query: 1   MPTGTSIHMSALDGIVNVNSMFTLAVFLGLAWNPN--DPTNNLVESPN----CLA--GPS 60
           +PT T IH++A+DGIVNVNS+F+LA+FLGL  + N   P ++     +    C++  GP+
Sbjct: 16  LPT-TLIHVTAIDGIVNVNSLFSLALFLGLTTSGNITFPVSSSASENHHLRRCISAKGPA 75

Query: 61  VAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYH---PTEFFV------RVNKTA 120
           +AE LV+ HVYSFS FLFSSLIA+ LKQAIR + +         E  V      RVN  A
Sbjct: 76  LAERLVSSHVYSFSLFLFSSLIAMSLKQAIRTTTTTTNGNCLEEEARVLNAGEGRVNLAA 135

Query: 121 VRIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSS-QTYAAVVPLVILVPFALVIY 172
           +R+G++ S + SV GCGFL MAL+++VQIKLG L C  S    AA+VPLV+LVP AL+IY
Sbjct: 136 LRVGIVASCVASVLGCGFLTMALVDLVQIKLGPLECKRSFHALAAIVPLVVLVPSALIIY 195

[Close]

BLAST of Tan0004716 vs. TAIR 10
Match: AT3G07510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01580.1); Has 133 Blast hits to 133 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 137.9 bits (346), Expect = 7.7e-33
Identity = 82/166 (49.40%), Postives = 110/166 (66.27%), Query Frame = 0


Query: 5   TSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAGPSVAENLVAFHVYS 64
           TS+H+SALDG+VNVNS+FT+AVF+GL+       ++L +  +C A   VA+ L+ F V S
Sbjct: 24  TSVHVSALDGLVNVNSLFTIAVFVGLSL-ATPGQHSLEQRSSCDASADVAKKLLVFEVVS 83

Query: 65  FSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCGFLMM 124
           FS FLFSSL+A GLK A+ +  S   +   F   +N   +R GM+ S +GSV GC FLM+
Sbjct: 84  FSFFLFSSLVAQGLKLALNLLNSKDVNEI-FRAHINIKVLRWGMMASAVGSVMGCLFLML 143

Query: 125 ALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAF 171
           +++NV+QI+LG LSCGS     AV  LV LV  AL+IYI    YAF
Sbjct: 144 SMVNVIQIRLGLLSCGSKSAAQAVATLVTLVSSALLIYISTAIYAF 187

[Close]

BLAST of Tan0004716 vs. TAIR 10
Match: AT3G07510.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01580.1); Has 133 Blast hits to 133 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 137.9 bits (346), Expect = 7.7e-33
Identity = 82/166 (49.40%), Postives = 110/166 (66.27%), Query Frame = 0


Query: 5   TSIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAGPSVAENLVAFHVYS 64
           TS+H+SALDG+VNVNS+FT+AVF+GL+       ++L +  +C A   VA+ L+ F V S
Sbjct: 24  TSVHVSALDGLVNVNSLFTIAVFVGLSL-ATPGQHSLEQRSSCDASADVAKKLLVFEVVS 83

Query: 65  FSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCGFLMM 124
           FS FLFSSL+A GLK A+ +  S   +   F   +N   +R GM+ S +GSV GC FLM+
Sbjct: 84  FSFFLFSSLVAQGLKLALNLLNSKDVNEI-FRAHINIKVLRWGMMASAVGSVMGCLFLML 143

Query: 125 ALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAF 171
           +++NV+QI+LG LSCGS     AV  LV LV  AL+IYI    YAF
Sbjct: 144 SMVNVIQIRLGLLSCGSKSAAQAVATLVTLVSSALLIYISTAIYAF 187

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BLAST of Tan0004716 vs. TAIR 10
Match: AT2G01580.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G07510.2); Has 129 Blast hits to 129 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 126.3 bits (316), Expect = 2.3e-29
Identity = 73/167 (43.71%), Postives = 113/167 (67.66%), Query Frame = 0


Query: 5   TSIHMSALDGIVNVNSMFTLAVFLGLAWN-PNDPTNNLVESPNCLAGPSVAENLVAFHVY 64
           TS+H++ALDGIV+ NS+FT+AVF+G++++ P+D T  L +   C AG  V  +LV F V 
Sbjct: 26  TSVHVTALDGIVSANSLFTVAVFVGISFDQPSDLT--LTDRTECSAGRDVERDLVVFEVI 85

Query: 65  SFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCGFLM 124
           SF+ FLFSSL+A G+K AI +  S       F   +N+  +R G++ +  GS+ GC FL+
Sbjct: 86  SFAFFLFSSLVAQGMKLAINLLNSKETDEV-FKANINRDVLRFGVVGAAGGSILGCVFLL 145

Query: 125 MALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAF 171
           +++++V+Q++LG LSCG++     V+ LV+LV  AL +YI  V Y+F
Sbjct: 146 LSIVDVIQLRLGLLSCGNALAIHTVLVLVVLVSSALSVYIFTVFYSF 189

The following BLAST results are available for this feature:

BLAST of Tan0004716 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0004716 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022990564.1	1.3e-85	97.67	uncharacterized protein LOC111487406 [Cucurbita maxima] >XP_023515774.1 uncharac...	[more]
XP_022962637.1	2.1e-85	97.67	uncharacterized protein LOC111463051 [Cucurbita moschata]	[more]
XP_038885575.1	5.3e-84	95.35	uncharacterized protein LOC120075905 [Benincasa hispida]	[more]
XP_022134461.1	1.3e-82	93.02	uncharacterized protein LOC111006700 [Momordica charantia]	[more]
XP_004138443.1	1.3e-82	93.02	uncharacterized protein LOC101208865 [Cucumis sativus]	[more]

BLAST of Tan0004716 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JSD7	6.1e-86	97.67	uncharacterized protein LOC111487406 OS=Cucurbita maxima OX=3661 GN=LOC111487406...	[more]
A0A6J1HD70	1.0e-85	97.67	uncharacterized protein LOC111463051 OS=Cucurbita moschata OX=3662 GN=LOC1114630...	[more]
A0A0A0KA88	6.3e-83	93.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G008850 PE=4 SV=1	[more]
A0A6J1BXU9	6.3e-83	93.02	uncharacterized protein LOC111006700 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A5D3DL39	2.4e-82	93.02	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Tan0004716 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05950.1	3.7e-59	69.94	maternal effect embryo arrest 60	[more]
AT3G46890.1	1.1e-34	51.32	BEST Arabidopsis thaliana protein match is: maternal effect embryo arrest 60 (TA...	[more]
AT3G07510.1	7.7e-33	49.40	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G07510.2	7.7e-33	49.40	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G01580.1	2.3e-29	43.71	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33430:SF7	OS07G0240400 PROTEIN	coord: 3..171
None	No IPR available	PANTHER	PTHR33430	MATERNAL EFFECT EMBRYO ARREST PROTEIN	coord: 3..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0004716.1	Tan0004716.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008289	lipid binding