Tan0004685 (gene) Snake gourd v1

Overview


Name	Tan0004685
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	UPF0603 protein At1g54780, chloroplastic-like
Location	LG08: 5030521 .. 5034337 (+)
RNA-Seq Expression	Tan0004685
Synteny	Tan0004685

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCATGTTCATCCTTGACAAACTAAAAAACAAAGAAAAAGAATTAAAGACAGTTTATCCATAATGTAACTGGCTAACAGGATTGCTCTTCCTCATACTTTTTCATGGCTCTCATGAACTCTATCCATCATCAAAGACTATTTGTCCCTACCAAAAAAAAATCCAAACCACTCAATTTCTGATGGAAGAACTAACAGAGCTTCATCTCCATTTTTCCTCTCTGTTCCATGTCTCACCATATCTGAAACTCTTCATTTTCCTATGGAAACCATTCTCTCTCCCCACTCTCTCTCTCCTCTCCTCAGCCCCAAACCTTCCTCTTCCAAGAATCTCTTCCCCTATTCCTTCCAACCCAGAACAAATTTTCTCTCTCTCTCTAAGCCCATTTCTCTCTCCCTCAAAACCCCCTCTCCTAAGTCTCTCCCAGTTCCTTCGAATTGGTTCTCCCATCTCCACCATGGACTGGCAGCGCTAGCCATTTCTCTGGCTCTCAATTTCTCCCCTTTATTGGCCGGCGGGAATGCCCTAGCGTCTGAATTTGACGTGCTCAATGACGGGCCGCCGAAGGAGTCGCATCTGGTGGACGATGCCGGAGTTCTCAGTAGGGTTACGAAGTCGGATTTGAAGAGGCTGTTGACGGATTTGGAGTCGAGAAAGAATTTCCACATCGATTTCGTCACTGTTAGAAAGCTCACTGTGAGTTCTCTGTTTTTTTTTTTTTTTTTCTTTCTCTGCTTCTAATTCTAGAGAGAGAGAAGCCAAATTCGTGTAGTTCGGAGAGAAGCTGTGGATTTTTATTGGCTTGAAGGTCTCTTTTACTCTGCTTTGAGCAGTAATTTGAACTATGGTTTAGTATGAGAAGAGAAAGGTACTTTTTACAGTGGAATGATTTTAATTTGGAGGAATGTGTTAATGAACTGGTGTATGTTTATGAAAATTTGAAAATCTTTGTGAGATTCATTATCAGAAAGTGGGTACCATTTTGTTATGGGTTGTTTTAAAACTTCAACCATGGTACCCACTGTCCGGACCCGAAAAGGATCCCCGGTCAAACCGGGGATTCTCCGCTCTGTTTGGAATGAGGATCCGACCTCGTGGATATTTTTGCCATCTCTAGGTAGAAAACTAAGTGCATTTGAGTGGTGATCTGAAAATATAAATTTGAAAACAAAGGATTCAAGAAAAATGTTGTATTTTATGTTTTTGAGATATGTGTTTGGCAGCCGTTTTAGAAATTGAGAATGTGTTTGAGTATAACAAATGTAAGGTATGAAGATTTGAACCTCTCACCCTATGAAAAAGAATGAATACATGCCAATTACCAGCTCGACATAAAACTAGTTGGAGATTATTAATTAATTTATGAACCTATTTTATGTTATAAAATTTGTATGATTATTATTTTACACTATTATATAATATATTATATTATAGCTATTTTAATTTAACAAAAATGAATTGAGTTTATATCATGAAATAGTTTTTAGAAACTCGTCTGTCAAATACATATTCGTTCAACTCAATGAATCCAAAAACATAAAACATAATCTAGATTAGATGTGAAGTATGTCCTTAAAAATCCTTAGCCTCTCGAGAGAATGGTCTTGTAAAGATTAGTAAGGTGGGGTAAGAGCGTAATGCAAGAAGTTGTAAGATATCAAATCAAATGAAAAGGGAGATTCATGTATGAACTCTGAAATGAATTCATCAACTACTGATTGCAGAGCAAAGCTGATGCATTTGAGTATGCTGATCAAGTTTTGGAGCGTTGGTATCCCACTGTGGAAGATGGCAACAACAAAGGCATAGTTGTACTTGTCACCAGTCAGAAGGAAGGAGCCATTACTGGTGGCCCTGCCTTTATCCAAGCTGTTGGAGAAAATATTCTTGATGCCACTGTAACAGAGAACCTCCCAGGTAAACTAAACTAAACTAAACTAAACTAACTACCACTTCTTTCACTTCTTTCACTCTTCACTTTCCAAGTTATGGATGTTATGTATGTCAAATCTGTCATCAACAATTGAACAAAACTCTCACCTAAAGCTGCCAATGCAATTTTGCATCAGCCTCCTCAGCTAACAATTTCTACTGCCTCTTGCTAGACTTAAATTGTGACACATTACAACTAGCACATGCCTTTAAGTGCACTCGTGTTCTTGTCGTGGTGCTTAAAATTGAGCGTCTCTGTGTTTGATGCTAGTCGCGTTTGCGTTGCGTATAAGTTTCTCGATATCGGAGGAAAAGAAAACCGCAAACAAACTTGTATCTTAGTGAGTGTTGTTAACCTTTCCAACTGGTGTTGTTTTCTAGTGTTACTACCTTCATCTATGGAGTGCTTTCTTGAAACTATTTGTGCCCTTTTCTAATCCTATGTGGTGTTAAGGAGCTATGTTTACAGTACTAGTTTACTCATTAGGCTCTATGAATCAAATTTGTATTCACTCGCAAAAGCATCAGAGGAAGTAGGAGTAGAGAATATAATAAATTATTAAATTTAGGTTAAATTACAAGAAAAGTCTTGAACTTTCTGGTTTGTGTATTTGGTCCAAAATTTTTAAAAATGTCTTAGGTTCTTGAGCTTTCAATTTTGTACCCAATAGGCCCCTAAACTCTAAGGGTCTCTTTGGAGCACAAGTTATAATAACCTGTGTTATTATAACCTGTAGAATACTCTACACCCCAAACACAAACTATTATAAACCCAGACTATGCTACTCTGCATTTTAAATAATATTATATGATTCCACAGACAATAATAACCTACATACTATTATAACCCATGTTATTATAATCCTCTCAGTGCCCTAAACAACCCCTAAAAAATGTTTGAACTTTCAATTTTGCATCTACTAGGTTCCTGAATTTTCAATTTTGTATCTAATAGGTCCTTGACTTATTTGGCATTTTTAAAAATTCATGGACCTACTAAATACAAAATTTAAGTTTAGGGTCTCATTACAAACAAATCAGTTTCTTTTCCCAAAAGATCAGTTCATATGTCATTAGACACAAAATTGAAAGGTCAAAGACCTATTAGACACAAGGGTGTGGGATTCGAACATTTGACCTCTTGGTCGAGTATACATGTCAATTACTGTTAAGTTATACTCATTTTGGCAGACTAAACTGCTAATTTAACCTTAAATTTACTCTACCCGTTCATCATGGCTCATTTCCTCTTTAACTTAATGTTGTTCTTACTTCTTAGTTTCTTTTATTCTAAGATCTGATACTAAAACACAATGATGAATGAAGCAAAGCAGTGAATAATGCTTGTAGTTGTTACTTCAATTTCAAACTACAGACTGACTAAGATTGTCTGTTATGTAACTGCAGTCTTAGCAACTGATGAAAAATATAATGAAGCCATATATAGCAGTGCAAAGCGACTGGTTGCTGCCATTGATGGGCTTCCAGATCCTGGTGGACCTTCAATTAAGGAAAATAAGAGGGAATCTAACTTCAAAACAAGAGAAGAGACAGAGGAGAAACGAGGGCAGTTTTCTCTTGTAGTTGGAGGTTTGTTAGTGATAGCTTTTGTTGTTCCTATGGCTCAGTATTATGCTTATGTATCTAAGAAGTAAAAGAACCATGGAAGAGAGATCTTTCTCATCTATTTTCTTCACATTCAAATGTATAACCTTGATGTTGTACAAAGAGGATCACTACAAGATGATTTTCAAGAAACCTGTTATAAAACAGAGTTGAGTTTTCCCCCCTCTGTCTCTCTTTTCTCTAGGTCTGTTTTTTTTTTTTTAAATAAAATATTTAGGATATTGGAGGTTCCCCTCTCTGTATTATGTTCACTGCGAAG

mRNA sequence

GTTCATGTTCATCCTTGACAAACTAAAAAACAAAGAAAAAGAATTAAAGACAGTTTATCCATAATGTAACTGGCTAACAGGATTGCTCTTCCTCATACTTTTTCATGGCTCTCATGAACTCTATCCATCATCAAAGACTATTTGTCCCTACCAAAAAAAAATCCAAACCACTCAATTTCTGATGGAAGAACTAACAGAGCTTCATCTCCATTTTTCCTCTCTGTTCCATGTCTCACCATATCTGAAACTCTTCATTTTCCTATGGAAACCATTCTCTCTCCCCACTCTCTCTCTCCTCTCCTCAGCCCCAAACCTTCCTCTTCCAAGAATCTCTTCCCCTATTCCTTCCAACCCAGAACAAATTTTCTCTCTCTCTCTAAGCCCATTTCTCTCTCCCTCAAAACCCCCTCTCCTAAGTCTCTCCCAGTTCCTTCGAATTGGTTCTCCCATCTCCACCATGGACTGGCAGCGCTAGCCATTTCTCTGGCTCTCAATTTCTCCCCTTTATTGGCCGGCGGGAATGCCCTAGCGTCTGAATTTGACGTGCTCAATGACGGGCCGCCGAAGGAGTCGCATCTGGTGGACGATGCCGGAGTTCTCAGTAGGGTTACGAAGTCGGATTTGAAGAGGCTGTTGACGGATTTGGAGTCGAGAAAGAATTTCCACATCGATTTCGTCACTGTTAGAAAGCTCACTAGCAAAGCTGATGCATTTGAGTATGCTGATCAAGTTTTGGAGCGTTGGTATCCCACTGTGGAAGATGGCAACAACAAAGGCATAGTTGTACTTGTCACCAGTCAGAAGGAAGGAGCCATTACTGGTGGCCCTGCCTTTATCCAAGCTGTTGGAGAAAATATTCTTGATGCCACTGTAACAGAGAACCTCCCAGTCTTAGCAACTGATGAAAAATATAATGAAGCCATATATAGCAGTGCAAAGCGACTGGTTGCTGCCATTGATGGGCTTCCAGATCCTGGTGGACCTTCAATTAAGGAAAATAAGAGGGAATCTAACTTCAAAACAAGAGAAGAGACAGAGGAGAAACGAGGGCAGTTTTCTCTTGTAGTTGGAGGTTTGTTAGTGATAGCTTTTGTTGTTCCTATGGCTCAGTATTATGCTTATGTATCTAAGAAGTAAAAGAACCATGGAAGAGAGATCTTTCTCATCTATTTTCTTCACATTCAAATGTATAACCTTGATGTTGTACAAAGAGGATCACTACAAGATGATTTTCAAGAAACCTGTTATAAAACAGAGTTGAGTTTTCCCCCCTCTGTCTCTCTTTTCTCTAGGTCTGTTTTTTTTTTTTTAAATAAAATATTTAGGATATTGGAGGTTCCCCTCTCTGTATTATGTTCACTGCGAAG

Coding sequence (CDS)

ATGGAAACCATTCTCTCTCCCCACTCTCTCTCTCCTCTCCTCAGCCCCAAACCTTCCTCTTCCAAGAATCTCTTCCCCTATTCCTTCCAACCCAGAACAAATTTTCTCTCTCTCTCTAAGCCCATTTCTCTCTCCCTCAAAACCCCCTCTCCTAAGTCTCTCCCAGTTCCTTCGAATTGGTTCTCCCATCTCCACCATGGACTGGCAGCGCTAGCCATTTCTCTGGCTCTCAATTTCTCCCCTTTATTGGCCGGCGGGAATGCCCTAGCGTCTGAATTTGACGTGCTCAATGACGGGCCGCCGAAGGAGTCGCATCTGGTGGACGATGCCGGAGTTCTCAGTAGGGTTACGAAGTCGGATTTGAAGAGGCTGTTGACGGATTTGGAGTCGAGAAAGAATTTCCACATCGATTTCGTCACTGTTAGAAAGCTCACTAGCAAAGCTGATGCATTTGAGTATGCTGATCAAGTTTTGGAGCGTTGGTATCCCACTGTGGAAGATGGCAACAACAAAGGCATAGTTGTACTTGTCACCAGTCAGAAGGAAGGAGCCATTACTGGTGGCCCTGCCTTTATCCAAGCTGTTGGAGAAAATATTCTTGATGCCACTGTAACAGAGAACCTCCCAGTCTTAGCAACTGATGAAAAATATAATGAAGCCATATATAGCAGTGCAAAGCGACTGGTTGCTGCCATTGATGGGCTTCCAGATCCTGGTGGACCTTCAATTAAGGAAAATAAGAGGGAATCTAACTTCAAAACAAGAGAAGAGACAGAGGAGAAACGAGGGCAGTTTTCTCTTGTAGTTGGAGGTTTGTTAGTGATAGCTTTTGTTGTTCCTATGGCTCAGTATTATGCTTATGTATCTAAGAAGTAA

Protein sequence

METILSPHSLSPLLSPKPSSSKNLFPYSFQPRTNFLSLSKPISLSLKTPSPKSLPVPSNWFSHLHHGLAALAISLALNFSPLLAGGNALASEFDVLNDGPPKESHLVDDAGVLSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLPDPGGPSIKENKRESNFKTREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK

Homology

[Close]

BLAST of Tan0004685 vs. ExPASy Swiss-Prot
Match: Q9ZVL6 (UPF0603 protein At1g54780, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g54780 PE=1 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 1.1e-111
Identity = 214/297 (72.05%), Postives = 250/297 (84.18%), Query Frame = 0


Query: 1   METILSPHSLSPLLSPKPSSSKNLFPYSFQPRTNFLSLSKPISLSLKTPSPKSL------ 60
           MET+LSP +LSP L+PKP S      +  +P ++ LSLSKP + S     PK L      
Sbjct: 1   METLLSPRALSPPLNPKPLSL-----HQTKPTSHSLSLSKPTTFS----GPKHLSTRFTK 60

Query: 61  PVPSNWFSHLHHGLAALAISLALNFSPLLAGGNALASEFDVLNDGPPKESHLVDDAGVLS 120
           P   NW      GLAALA+SL L FSP+   G ALASEF++LNDGPPKE+++VDDAGVLS
Sbjct: 61  PESRNWLIDAKQGLAALALSLTLTFSPV---GTALASEFNILNDGPPKETYVVDDAGVLS 120

Query: 121 RVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIV 180
           RVTKSDLK+LL+DLE RK   ++F+TVRKLTSKADAFEYADQVLE+WYP++E+GNNKGIV
Sbjct: 121 RVTKSDLKKLLSDLEYRKKLRLNFITVRKLTSKADAFEYADQVLEKWYPSIEEGNNKGIV 180

Query: 181 VLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDG 240
           VL+TSQKEGAITGGPAFI+AVGENILDATV+ENLPVLATDEKYNEA+YSSAKRLVAAIDG
Sbjct: 181 VLITSQKEGAITGGPAFIEAVGENILDATVSENLPVLATDEKYNEAVYSSAKRLVAAIDG 240

Query: 241 LPDPGGPSIKENKRESNFKTREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 292
            PDPGGP++K++KRESNFKT+EET+EKRGQFSLVVGGLLVIAFVVPMAQY+AYVS+K
Sbjct: 241 QPDPGGPTVKDSKRESNFKTKEETDEKRGQFSLVVGGLLVIAFVVPMAQYFAYVSRK 285

[Close]

BLAST of Tan0004685 vs. ExPASy Swiss-Prot
Match: A2Y4G9 (UPF0603 protein OsI_019212, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_19898 PE=3 SV=2)

HSP 1 Score: 378.3 bits (970), Expect = 8.1e-104
Identity = 205/304 (67.43%), Postives = 243/304 (79.93%), Query Frame = 0


Query: 1   METILSPHSLSPLLSP-KPSSSKNLFPYSFQPRTNFLSLSKPISLSLKTPSPKSLPVPS- 60
           MET+LSP   S LLSP + S  K   P +    ++       +S +L+   P    V + 
Sbjct: 1   METLLSP---STLLSPLRGSKKKPASPAASASSSSSSPARSVVSCALRRQQPPPQAVAAW 60

Query: 61  -----------NWFSHLHHGLAALAISLALNFSPLLAGGNALASEFDVLNDGPPKESHLV 120
                      +W + L HGLAA A+SLA++ +P  A   A+ASEFDVLN GPP+++++V
Sbjct: 61  RGDGGRGGGVGSWATFLQHGLAAAALSLAISMAP--APAPAVASEFDVLNGGPPEDTYVV 120

Query: 121 DDAGVLSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVED 180
           DDAGVLSRVTKSD+KRL+ DLESRKN  I+F+TVRKLTSKADAFEYADQVLE+WYPTVE+
Sbjct: 121 DDAGVLSRVTKSDVKRLVRDLESRKNIRINFITVRKLTSKADAFEYADQVLEKWYPTVEE 180

Query: 181 GNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKR 240
           GNNKGIVVLVTSQKEGAITGGPAF+QAVG+ ILD+TV+ENLPVLATDEKYNEAIY++AKR
Sbjct: 181 GNNKGIVVLVTSQKEGAITGGPAFVQAVGDEILDSTVSENLPVLATDEKYNEAIYTTAKR 240

Query: 241 LVAAIDGLPDPGGPSIKENKRESNFKTREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAY 292
           L AAIDGLPDPGGP+ K+NKRESNFKT+EETEEKRGQF+LVVGGLLVIAFVVPMAQYYAY
Sbjct: 241 LAAAIDGLPDPGGPTFKDNKRESNFKTKEETEEKRGQFTLVVGGLLVIAFVVPMAQYYAY 299

[Close]

BLAST of Tan0004685 vs. ExPASy Swiss-Prot
Match: Q6ATY4 (UPF0603 protein Os05g0401100, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0401100 PE=3 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 8.1e-104
Identity = 205/304 (67.43%), Postives = 243/304 (79.93%), Query Frame = 0


Query: 1   METILSPHSLSPLLSP-KPSSSKNLFPYSFQPRTNFLSLSKPISLSLKTPSPKSLPVPS- 60
           MET+LSP   S LLSP + S  K   P +    ++       +S +L+   P    V + 
Sbjct: 1   METLLSP---STLLSPLRGSKKKPASPAASASSSSSSPARSVVSCALRRQQPPPQAVAAW 60

Query: 61  -----------NWFSHLHHGLAALAISLALNFSPLLAGGNALASEFDVLNDGPPKESHLV 120
                      +W + L HGLAA A+SLA++ +P  A   A+ASEFDVLN GPP+++++V
Sbjct: 61  RGDGGRGGGVGSWATFLQHGLAAAALSLAISMAP--APAPAVASEFDVLNGGPPEDTYVV 120

Query: 121 DDAGVLSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVED 180
           DDAGVLSRVTKSD+KRL+ DLESRKN  I+F+TVRKLTSKADAFEYADQVLE+WYPTVE+
Sbjct: 121 DDAGVLSRVTKSDVKRLVRDLESRKNIRINFITVRKLTSKADAFEYADQVLEKWYPTVEE 180

Query: 181 GNNKGIVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKR 240
           GNNKGIVVLVTSQKEGAITGGPAF+QAVG+ ILD+TV+ENLPVLATDEKYNEAIY++AKR
Sbjct: 181 GNNKGIVVLVTSQKEGAITGGPAFVQAVGDEILDSTVSENLPVLATDEKYNEAIYTTAKR 240

Query: 241 LVAAIDGLPDPGGPSIKENKRESNFKTREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAY 292
           L AAIDGLPDPGGP+ K+NKRESNFKT+EETEEKRGQF+LVVGGLLVIAFVVPMAQYYAY
Sbjct: 241 LAAAIDGLPDPGGPTFKDNKRESNFKTKEETEEKRGQFTLVVGGLLVIAFVVPMAQYYAY 299

[Close]

BLAST of Tan0004685 vs. NCBI nr
Match: XP_022946287.1 (UPF0603 protein At1g54780, chloroplastic-like [Cucurbita moschata] >KAG6599269.1 UPF0603 protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 530.4 bits (1365), Expect = 9.7e-147
Identity = 276/295 (93.56%), Postives = 281/295 (95.25%), Query Frame = 0


Query: 1   METILSPHSLSPLLSPKPSSSKNLFPYSFQPRTNFLSLSKPISLSLKTPSPK----SLPV 60
           METILSPH+LSPLL+PKPSS KNLFPYSFQPR +F+S S PIS SLK PSPK    SLPV
Sbjct: 1   METILSPHTLSPLLNPKPSSPKNLFPYSFQPRRHFVSFSNPISFSLKNPSPKSLRSSLPV 60

Query: 61  PSNWFSHLHHGLAALAISLALNFSPLLAGGNALASEFDVLNDGPPKESHLVDDAGVLSRV 120
           PSNWFSHL HGLAALAISLALNFSPLLA  NALASEFDVLNDGPPKESHLVDDAGVLSRV
Sbjct: 61  PSNWFSHLQHGLAALAISLALNFSPLLATHNALASEFDVLNDGPPKESHLVDDAGVLSRV 120

Query: 121 TKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVVL 180
           TKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVVL
Sbjct: 121 TKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVVL 180

Query: 181 VTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLP 240
           VTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLP
Sbjct: 181 VTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLP 240

Query: 241 DPGGPSIKENKRESNFKTREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 292
           DPGGPS KENKRESNFK+REETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 DPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 295

[Close]

BLAST of Tan0004685 vs. NCBI nr
Match: XP_022999120.1 (UPF0603 protein At1g54780, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 528.5 bits (1360), Expect = 3.7e-146
Identity = 276/299 (92.31%), Postives = 281/299 (93.98%), Query Frame = 0


Query: 1   METILSPHSLSPLLSPKPSSSKNLFPYSFQPRTNFLSLSKPISLSLKTPSPK-------- 60
           METILSPH+LSPLL+PKPSS KNLFPYSFQPR +F+S S PIS SLKTPSPK        
Sbjct: 49  METILSPHTLSPLLNPKPSSPKNLFPYSFQPRRHFVSFSNPISFSLKTPSPKSLRSSLRS 108

Query: 61  SLPVPSNWFSHLHHGLAALAISLALNFSPLLAGGNALASEFDVLNDGPPKESHLVDDAGV 120
           SLPVPSNWFSHL HGLAALAISLALNFSPLLA  NALASEFDVLNDGPPKESHLVDDAGV
Sbjct: 109 SLPVPSNWFSHLQHGLAALAISLALNFSPLLATHNALASEFDVLNDGPPKESHLVDDAGV 168

Query: 121 LSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG 180
           LSRVTKSDLKRLLTDLE RKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG
Sbjct: 169 LSRVTKSDLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG 228

Query: 181 IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAI 240
           IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAI
Sbjct: 229 IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAI 288

Query: 241 DGLPDPGGPSIKENKRESNFKTREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 292
           DGLPDPGGPS KENKRESNFK+REETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 289 DGLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 347

[Close]

BLAST of Tan0004685 vs. NCBI nr
Match: XP_023547269.1 (UPF0603 protein At1g54780, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 525.4 bits (1352), Expect = 3.1e-145
Identity = 275/299 (91.97%), Postives = 280/299 (93.65%), Query Frame = 0


Query: 1   METILSPHSLSPLLSPKPSSSKNLFPYSFQPRTNFLSLSKPISLSLKTPSPK-------- 60
           METILSPH+LSPLL+PKPSS KNLFPYSFQPR +F+S S PIS SLK  SPK        
Sbjct: 1   METILSPHTLSPLLNPKPSSPKNLFPYSFQPRRHFVSFSNPISFSLKNHSPKSLRSSLRS 60

Query: 61  SLPVPSNWFSHLHHGLAALAISLALNFSPLLAGGNALASEFDVLNDGPPKESHLVDDAGV 120
           SLPVPSNWFSHL HGLAALAISLALNFSPLLA  NALASEFDVLNDGPPKESHLVDDAGV
Sbjct: 61  SLPVPSNWFSHLQHGLAALAISLALNFSPLLATHNALASEFDVLNDGPPKESHLVDDAGV 120

Query: 121 LSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG 180
           LSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG
Sbjct: 121 LSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG 180

Query: 181 IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAI 240
           IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAI
Sbjct: 181 IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAI 240

Query: 241 DGLPDPGGPSIKENKRESNFKTREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 292
           DGLPDPGGPS KENKRESNFK+REETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 DGLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 299

[Close]

BLAST of Tan0004685 vs. NCBI nr
Match: XP_008455096.1 (PREDICTED: UPF0603 protein At1g54780, chloroplastic [Cucumis melo] >KAA0063677.1 UPF0603 protein [Cucumis melo var. makuwa] >TYK18350.1 UPF0603 protein [Cucumis melo var. makuwa])

HSP 1 Score: 525.0 bits (1351), Expect = 4.1e-145
Identity = 274/296 (92.57%), Postives = 282/296 (95.27%), Query Frame = 0


Query: 1   METILSPHSLSPLLSPKPSSSKNLFPYSFQPRTNFLSLSKPISLSLKTPSP-----KSLP 60
           METILSPHSLSPLL+PKPSSSKNL  YS QPR+N +SLSKPISLSLKTPSP      SLP
Sbjct: 1   METILSPHSLSPLLNPKPSSSKNLSLYSTQPRSNLVSLSKPISLSLKTPSPPKSLRSSLP 60

Query: 61  VPSNWFSHLHHGLAALAISLALNFSPLLAGGNALASEFDVLNDGPPKESHLVDDAGVLSR 120
           VPS WFSHL HGLAA+AISLALNFSPLLAG NALASEFDVLNDGPPKE+H+VDDAGVLSR
Sbjct: 61  VPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLNDGPPKETHVVDDAGVLSR 120

Query: 121 VTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVV 180
           VTKSDLKRLLTDLE+RKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVV
Sbjct: 121 VTKSDLKRLLTDLETRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVV 180

Query: 181 LVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGL 240
           LVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGL
Sbjct: 181 LVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGL 240

Query: 241 PDPGGPSIKENKRESNFKTREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 292
           PDPGGPS K+NKRESNFKTREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 PDPGGPSFKDNKRESNFKTREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 296

[Close]

BLAST of Tan0004685 vs. NCBI nr
Match: XP_023547268.1 (UPF0603 protein At1g54780, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 522.3 bits (1344), Expect = 2.6e-144
Identity = 274/299 (91.64%), Postives = 279/299 (93.31%), Query Frame = 0


Query: 1   METILSPHSLSPLLSPKPSSSKNLFPYSFQPRTNFLSLSKPISLSLKTPSPK-------- 60
           METILS H+LSPLL+PKPSS KNLFPYSFQPR +F+S S PIS SLK  SPK        
Sbjct: 1   METILSSHTLSPLLNPKPSSPKNLFPYSFQPRRHFVSFSNPISFSLKNHSPKSLRSSLRS 60

Query: 61  SLPVPSNWFSHLHHGLAALAISLALNFSPLLAGGNALASEFDVLNDGPPKESHLVDDAGV 120
           SLPVPSNWFSHL HGLAALAISLALNFSPLLA  NALASEFDVLNDGPPKESHLVDDAGV
Sbjct: 61  SLPVPSNWFSHLQHGLAALAISLALNFSPLLATHNALASEFDVLNDGPPKESHLVDDAGV 120

Query: 121 LSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG 180
           LSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG
Sbjct: 121 LSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG 180

Query: 181 IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAI 240
           IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAI
Sbjct: 181 IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAI 240

Query: 241 DGLPDPGGPSIKENKRESNFKTREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 292
           DGLPDPGGPS KENKRESNFK+REETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 DGLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 299

[Close]

BLAST of Tan0004685 vs. ExPASy TrEMBL
Match: A0A6J1G3B4 (UPF0603 protein At1g54780, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111450415 PE=4 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 4.7e-147
Identity = 276/295 (93.56%), Postives = 281/295 (95.25%), Query Frame = 0


Query: 1   METILSPHSLSPLLSPKPSSSKNLFPYSFQPRTNFLSLSKPISLSLKTPSPK----SLPV 60
           METILSPH+LSPLL+PKPSS KNLFPYSFQPR +F+S S PIS SLK PSPK    SLPV
Sbjct: 1   METILSPHTLSPLLNPKPSSPKNLFPYSFQPRRHFVSFSNPISFSLKNPSPKSLRSSLPV 60

Query: 61  PSNWFSHLHHGLAALAISLALNFSPLLAGGNALASEFDVLNDGPPKESHLVDDAGVLSRV 120
           PSNWFSHL HGLAALAISLALNFSPLLA  NALASEFDVLNDGPPKESHLVDDAGVLSRV
Sbjct: 61  PSNWFSHLQHGLAALAISLALNFSPLLATHNALASEFDVLNDGPPKESHLVDDAGVLSRV 120

Query: 121 TKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVVL 180
           TKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVVL
Sbjct: 121 TKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVVL 180

Query: 181 VTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLP 240
           VTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLP
Sbjct: 181 VTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGLP 240

Query: 241 DPGGPSIKENKRESNFKTREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 292
           DPGGPS KENKRESNFK+REETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 DPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 295

[Close]

BLAST of Tan0004685 vs. ExPASy TrEMBL
Match: A0A6J1KEE9 (UPF0603 protein At1g54780, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111493599 PE=4 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 1.8e-146
Identity = 276/299 (92.31%), Postives = 281/299 (93.98%), Query Frame = 0


Query: 1   METILSPHSLSPLLSPKPSSSKNLFPYSFQPRTNFLSLSKPISLSLKTPSPK-------- 60
           METILSPH+LSPLL+PKPSS KNLFPYSFQPR +F+S S PIS SLKTPSPK        
Sbjct: 49  METILSPHTLSPLLNPKPSSPKNLFPYSFQPRRHFVSFSNPISFSLKTPSPKSLRSSLRS 108

Query: 61  SLPVPSNWFSHLHHGLAALAISLALNFSPLLAGGNALASEFDVLNDGPPKESHLVDDAGV 120
           SLPVPSNWFSHL HGLAALAISLALNFSPLLA  NALASEFDVLNDGPPKESHLVDDAGV
Sbjct: 109 SLPVPSNWFSHLQHGLAALAISLALNFSPLLATHNALASEFDVLNDGPPKESHLVDDAGV 168

Query: 121 LSRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG 180
           LSRVTKSDLKRLLTDLE RKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG
Sbjct: 169 LSRVTKSDLKRLLTDLELRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKG 228

Query: 181 IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAI 240
           IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAI
Sbjct: 229 IVVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAI 288

Query: 241 DGLPDPGGPSIKENKRESNFKTREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 292
           DGLPDPGGPS KENKRESNFK+REETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 289 DGLPDPGGPSFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 347

[Close]

BLAST of Tan0004685 vs. ExPASy TrEMBL
Match: A0A5D3D492 (UPF0603 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00650 PE=4 SV=1)

HSP 1 Score: 525.0 bits (1351), Expect = 2.0e-145
Identity = 274/296 (92.57%), Postives = 282/296 (95.27%), Query Frame = 0


Query: 1   METILSPHSLSPLLSPKPSSSKNLFPYSFQPRTNFLSLSKPISLSLKTPSP-----KSLP 60
           METILSPHSLSPLL+PKPSSSKNL  YS QPR+N +SLSKPISLSLKTPSP      SLP
Sbjct: 1   METILSPHSLSPLLNPKPSSSKNLSLYSTQPRSNLVSLSKPISLSLKTPSPPKSLRSSLP 60

Query: 61  VPSNWFSHLHHGLAALAISLALNFSPLLAGGNALASEFDVLNDGPPKESHLVDDAGVLSR 120
           VPS WFSHL HGLAA+AISLALNFSPLLAG NALASEFDVLNDGPPKE+H+VDDAGVLSR
Sbjct: 61  VPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLNDGPPKETHVVDDAGVLSR 120

Query: 121 VTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVV 180
           VTKSDLKRLLTDLE+RKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVV
Sbjct: 121 VTKSDLKRLLTDLETRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVV 180

Query: 181 LVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGL 240
           LVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGL
Sbjct: 181 LVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGL 240

Query: 241 PDPGGPSIKENKRESNFKTREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 292
           PDPGGPS K+NKRESNFKTREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 PDPGGPSFKDNKRESNFKTREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 296

[Close]

BLAST of Tan0004685 vs. ExPASy TrEMBL
Match: A0A1S3C0U8 (UPF0603 protein At1g54780, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495349 PE=4 SV=1)

HSP 1 Score: 525.0 bits (1351), Expect = 2.0e-145
Identity = 274/296 (92.57%), Postives = 282/296 (95.27%), Query Frame = 0


Query: 1   METILSPHSLSPLLSPKPSSSKNLFPYSFQPRTNFLSLSKPISLSLKTPSP-----KSLP 60
           METILSPHSLSPLL+PKPSSSKNL  YS QPR+N +SLSKPISLSLKTPSP      SLP
Sbjct: 1   METILSPHSLSPLLNPKPSSSKNLSLYSTQPRSNLVSLSKPISLSLKTPSPPKSLRSSLP 60

Query: 61  VPSNWFSHLHHGLAALAISLALNFSPLLAGGNALASEFDVLNDGPPKESHLVDDAGVLSR 120
           VPS WFSHL HGLAA+AISLALNFSPLLAG NALASEFDVLNDGPPKE+H+VDDAGVLSR
Sbjct: 61  VPSTWFSHLQHGLAAVAISLALNFSPLLAGHNALASEFDVLNDGPPKETHVVDDAGVLSR 120

Query: 121 VTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVV 180
           VTKSDLKRLLTDLE+RKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVV
Sbjct: 121 VTKSDLKRLLTDLETRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIVV 180

Query: 181 LVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGL 240
           LVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGL
Sbjct: 181 LVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDGL 240

Query: 241 PDPGGPSIKENKRESNFKTREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 292
           PDPGGPS K+NKRESNFKTREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 PDPGGPSFKDNKRESNFKTREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 296

[Close]

BLAST of Tan0004685 vs. ExPASy TrEMBL
Match: A0A6J1DAY7 (UPF0603 protein At1g54780, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111018793 PE=4 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 1.2e-142
Identity = 273/298 (91.61%), Postives = 282/298 (94.63%), Query Frame = 0


Query: 1   METILSPH--SLSPLLSPKPSSSKNLFPYSFQPRTNFLSLSKPISLSLKTPSPK----SL 60
           METILSPH  SLSPLLSPK SSSKNL P+S QPR+ F+S SKPISL+LK PSP+    SL
Sbjct: 1   METILSPHSLSLSPLLSPKASSSKNLLPHSLQPRSKFVSFSKPISLTLKKPSPQSLRSSL 60

Query: 61  PVPSNWFSHLHHGLAALAISLALNFSPLLA-GGNALASEFDVLNDGPPKESHLVDDAGVL 120
           P+PSNWFSHL HGLAALAISLALNFSPLLA GGNALASEFDVL+DGPPKESHLVDDAGVL
Sbjct: 61  PIPSNWFSHLQHGLAALAISLALNFSPLLAGGGNALASEFDVLSDGPPKESHLVDDAGVL 120

Query: 121 SRVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGI 180
           SRVTKSDLKRLL+DLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGI
Sbjct: 121 SRVTKSDLKRLLSDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGI 180

Query: 181 VVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAID 240
           VVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAID
Sbjct: 181 VVLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAID 240

Query: 241 GLPDPGGPSIKENKRESNFKTREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 292
           GLPD GGPS K+NKRESNFKTREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK
Sbjct: 241 GLPDAGGPSFKDNKRESNFKTREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 298

[Close]

BLAST of Tan0004685 vs. TAIR 10
Match: AT1G54780.1 (thylakoid lumen 18.3 kDa protein )

HSP 1 Score: 404.4 bits (1038), Expect = 7.5e-113
Identity = 214/297 (72.05%), Postives = 250/297 (84.18%), Query Frame = 0


Query: 1   METILSPHSLSPLLSPKPSSSKNLFPYSFQPRTNFLSLSKPISLSLKTPSPKSL------ 60
           MET+LSP +LSP L+PKP S      +  +P ++ LSLSKP + S     PK L      
Sbjct: 1   METLLSPRALSPPLNPKPLSL-----HQTKPTSHSLSLSKPTTFS----GPKHLSTRFTK 60

Query: 61  PVPSNWFSHLHHGLAALAISLALNFSPLLAGGNALASEFDVLNDGPPKESHLVDDAGVLS 120
           P   NW      GLAALA+SL L FSP+   G ALASEF++LNDGPPKE+++VDDAGVLS
Sbjct: 61  PESRNWLIDAKQGLAALALSLTLTFSPV---GTALASEFNILNDGPPKETYVVDDAGVLS 120

Query: 121 RVTKSDLKRLLTDLESRKNFHIDFVTVRKLTSKADAFEYADQVLERWYPTVEDGNNKGIV 180
           RVTKSDLK+LL+DLE RK   ++F+TVRKLTSKADAFEYADQVLE+WYP++E+GNNKGIV
Sbjct: 121 RVTKSDLKKLLSDLEYRKKLRLNFITVRKLTSKADAFEYADQVLEKWYPSIEEGNNKGIV 180

Query: 181 VLVTSQKEGAITGGPAFIQAVGENILDATVTENLPVLATDEKYNEAIYSSAKRLVAAIDG 240
           VL+TSQKEGAITGGPAFI+AVGENILDATV+ENLPVLATDEKYNEA+YSSAKRLVAAIDG
Sbjct: 181 VLITSQKEGAITGGPAFIEAVGENILDATVSENLPVLATDEKYNEAVYSSAKRLVAAIDG 240

Query: 241 LPDPGGPSIKENKRESNFKTREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 292
            PDPGGP++K++KRESNFKT+EET+EKRGQFSLVVGGLLVIAFVVPMAQY+AYVS+K
Sbjct: 241 QPDPGGPTVKDSKRESNFKTKEETDEKRGQFSLVVGGLLVIAFVVPMAQYFAYVSRK 285

The following BLAST results are available for this feature:

BLAST of Tan0004685 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVL6	1.1e-111	72.05	UPF0603 protein At1g54780, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g...	[more]
A2Y4G9	8.1e-104	67.43	UPF0603 protein OsI_019212, chloroplastic OS=Oryza sativa subsp. indica OX=39946...	[more]
Q6ATY4	8.1e-104	67.43	UPF0603 protein Os05g0401100, chloroplastic OS=Oryza sativa subsp. japonica OX=3...	[more]

BLAST of Tan0004685 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946287.1	9.7e-147	93.56	UPF0603 protein At1g54780, chloroplastic-like [Cucurbita moschata] >KAG6599269.1...	[more]
XP_022999120.1	3.7e-146	92.31	UPF0603 protein At1g54780, chloroplastic-like [Cucurbita maxima]	[more]
XP_023547269.1	3.1e-145	91.97	UPF0603 protein At1g54780, chloroplastic-like isoform X2 [Cucurbita pepo subsp. ...	[more]
XP_008455096.1	4.1e-145	92.57	PREDICTED: UPF0603 protein At1g54780, chloroplastic [Cucumis melo] >KAA0063677.1...	[more]
XP_023547268.1	2.6e-144	91.64	UPF0603 protein At1g54780, chloroplastic-like isoform X1 [Cucurbita pepo subsp. ...	[more]

BLAST of Tan0004685 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G3B4	4.7e-147	93.56	UPF0603 protein At1g54780, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1KEE9	1.8e-146	92.31	UPF0603 protein At1g54780, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A5D3D492	2.0e-145	92.57	UPF0603 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G0065...	[more]
A0A1S3C0U8	2.0e-145	92.57	UPF0603 protein At1g54780, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495349...	[more]
A0A6J1DAY7	1.2e-142	91.61	UPF0603 protein At1g54780, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11...	[more]

BLAST of Tan0004685 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G54780.1	7.5e-113	72.05	thylakoid lumen 18.3 kDa protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.310.50		coord: 89..241 e-value: 1.2E-28 score: 101.3
None	No IPR available	PANTHER	PTHR30373	UNCHARACTERIZED	coord: 1..291
None	No IPR available	PANTHER	PTHR30373:SF2	UPF0603 PROTEIN OS05G0401100, CHLOROPLASTIC	coord: 1..291
IPR007621	TPM domain	PFAM	PF04536	TPM_phosphatase	coord: 107..230 e-value: 3.2E-18 score: 66.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0004685.1	Tan0004685.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016311	dephosphorylation
biological_process	GO:0010206	photosystem II repair
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003993	acid phosphatase activity
molecular_function	GO:0003729	mRNA binding