Tan0004525 (gene) Snake gourd v1

Overview


Name	Tan0004525
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Remorin_C domain-containing protein
Location	LG01: 2191532 .. 2192009 (+)
RNA-Seq Expression	Tan0004525
Synteny	Tan0004525

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCACTGAGGTATGGAAGAGCACAAAGAAAGCTGCTTTGGAAGCTGAAGTAAAGAAGATGGAGGTAATTAAATTAAATTATATTCCATATTTTTTTAATTTTTCAAATAGTTTGATTATATATAAGGTGGTTTTAATTAAAATCATAATTAATAAATTAATTTGATATGGAAAAGGCTGATTTGGAGAAGTTGAGGCTGAAGGAGATGGAGAAGGTGAAAAACAAAGAGGCTGAGACAAACAAGGTAGTTGAATTAAAGAAGGTCTCCATTGAAGCAAAAAGAGAACATCAAAAGCTCAAGGTTGAAGAGAAAGCTGCCAAGCATAGGTCTAACAATACAATTCCAACCAAGTGCTTTGGCATGTGCCAAGACTTGCTCTACCCTTTTTCTAGTTTCATTATATTATATTATATTATAATATATATATATATATATATATATATATATATATATATATATATGTTGTTCTAG

mRNA sequence

ATGGCTTCCACTGAGGTATGGAAGAGCACAAAGAAAGCTGCTTTGGAAGCTGAAGTAAAGAAGATGGAGGCTGATTTGGAGAAGTTGAGGCTGAAGGAGATGGAGAAGGTGAAAAACAAAGAGGCTGAGACAAACAAGGTAGTTGAATTAAAGAAGGTCTCCATTGAAGCAAAAAGAGAACATCAAAAGCTCAAGGTTGAAGAGAAAGCTGCCAAGCATAGGTCTAACAATACAATTCCAACCAAGTGCTTTGGCATGTGCCAAGACTTGCTCTACCCTTTTTCTAGTTTCATTATATTATATTATATTATAATATATATATATATATATATATATATATATATATATATATATATGTTGTTCTAG

Coding sequence (CDS)

ATGGCTTCCACTGAGGTATGGAAGAGCACAAAGAAAGCTGCTTTGGAAGCTGAAGTAAAGAAGATGGAGGCTGATTTGGAGAAGTTGAGGCTGAAGGAGATGGAGAAGGTGAAAAACAAAGAGGCTGAGACAAACAAGGTAGTTGAATTAAAGAAGGTCTCCATTGAAGCAAAAAGAGAACATCAAAAGCTCAAGGTTGAAGAGAAAGCTGCCAAGCATAGGTCTAACAATACAATTCCAACCAAGTGCTTTGGCATGTGCCAAGACTTGCTCTACCCTTTTTCTAGTTTCATTATATTATATTATATTATAATATATATATATATATATATATATATATATATATATATATATATGTTGTTCTAG

Protein sequence

MASTEVWKSTKKAALEAEVKKMEADLEKLRLKEMEKVKNKEAETNKVVELKKVSIEAKREHQKLKVEEKAAKHRSNNTIPTKCFGMCQDLLYPFSSFIILYYIIIYIYIYIYIYIYIYMLF

Homology

[Close]

BLAST of Tan0004525 vs. ExPASy Swiss-Prot
Match: Q9FFA5 (Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 9.7e-11
Identity = 42/85 (49.41%), Postives = 59/85 (69.41%), Query Frame = 0


Query: 1   MASTEVWKSTKKAALEAEVKKMEADLEKLRLKEMEKVKNKEAETNKVVELKKVSIEAKRE 60
           ++S   W++ KKAA+EAE+KKME  LEK + + +E++KNK A+ +K  E K+  IEAKR 
Sbjct: 116 LSSIGSWENNKKAAVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRG 175

Query: 61  HQKLKVEEKAAKHRSNNTIPTKCFG 86
            + LK EE AAK+R+  T P K FG
Sbjct: 176 EEILKAEELAAKYRATGTAPKKLFG 200

[Close]

BLAST of Tan0004525 vs. ExPASy Swiss-Prot
Match: P93788 (Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.8e-09
Identity = 41/80 (51.25%), Postives = 53/80 (66.25%), Query Frame = 0


Query: 7   WKSTKKAALEAEVKKMEADLEKLRLKEMEKVKNKEAETNKVVELKKVSIEAKREHQKLKV 66
           W+++KKA LEAE+KKME  LEK + +  EK+KNK A  +K  E K+  IEAKR    LK 
Sbjct: 118 WENSKKANLEAELKKMEEQLEKKKAEYTEKMKNKIALLHKEAEEKRAMIEAKRGEDLLKA 177

Query: 67  EEKAAKHRSNNTIPTKCFGM 87
           EE AAK+R+  T P K  G+
Sbjct: 178 EELAAKYRATGTAPKKILGI 197

[Close]

BLAST of Tan0004525 vs. ExPASy Swiss-Prot
Match: Q9M2D8 (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 7.7e-08
Identity = 36/85 (42.35%), Postives = 54/85 (63.53%), Query Frame = 0


Query: 1   MASTEVWKSTKKAALEAEVKKMEADLEKLRLKEMEKVKNKEAETNKVVELKKVSIEAKRE 60
           +A    W+++KKAA+EA++KK+E  LEK + +  E++KNK A  +K  E ++  IEAKR 
Sbjct: 126 IADVHAWENSKKAAVEAQLKKIEEQLEKKKAEYAERMKNKVAAIHKEAEERRAMIEAKRG 185

Query: 61  HQKLKVEEKAAKHRSNNTIPTKCFG 86
              LK EE AAK+R+   +P    G
Sbjct: 186 EDVLKAEETAAKYRATGIVPKATCG 210

[Close]

BLAST of Tan0004525 vs. ExPASy Swiss-Prot
Match: O80837 (Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.9e-07
Identity = 33/85 (38.82%), Postives = 55/85 (64.71%), Query Frame = 0


Query: 1   MASTEVWKSTKKAALEAEVKKMEADLEKLRLKEMEKVKNKEAETNKVVELKKVSIEAKRE 60
           ++    W+++KKAA+EA+++K+E  LEK + +  EK+KNK A  +K+ E K+  +EAK+ 
Sbjct: 104 ISDVHAWENSKKAAVEAQLRKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKG 163

Query: 61  HQKLKVEEKAAKHRSNNTIPTKCFG 86
            + LK EE  AK+R+   +P    G
Sbjct: 164 EELLKAEEMGAKYRATGVVPKATCG 188

[Close]

BLAST of Tan0004525 vs. NCBI nr
Match: KGN57373.1 (hypothetical protein Csa_010046 [Cucumis sativus])

HSP 1 Score: 117.5 bits (293), Expect = 8.2e-23
Identity = 65/89 (73.03%), Postives = 75/89 (84.27%), Query Frame = 0


Query: 1   MASTEVWKSTKKAALEAEVKKMEADLEKLRLKEMEKVKNKEAETNKVVELKKVSIEAKRE 60
           +ASTE WK++KKAALEAEVKK++ADL KLRL+ MEKVKNKEAET+K VE KK SIEAKRE
Sbjct: 38  LASTEAWKNSKKAALEAEVKKIDADLVKLRLRGMEKVKNKEAETHKAVESKKASIEAKRE 97

Query: 61  HQKLKVEEKAAKHRSNNTIPTKCFGMCQD 90
            +KLKVE KA  HR  NT+P KCFG+C D
Sbjct: 98  LKKLKVEGKAKVHRCTNTVPKKCFGICND 126

[Close]

BLAST of Tan0004525 vs. NCBI nr
Match: KAA0033641.1 (remorin-like [Cucumis melo var. makuwa] >TYK22940.1 remorin-like [Cucumis melo var. makuwa])

HSP 1 Score: 91.3 bits (225), Expect = 6.3e-15
Identity = 49/67 (73.13%), Postives = 56/67 (83.58%), Query Frame = 0


Query: 23 EADLEKLRLKEMEKVKNKEAETNKVVELKKVSIEAKREHQKLKVEEKAAKHRSNNTIPTK 82
          +ADL KLRLKEMEKVKNKEAET+K VE KK SIEAKRE +KLKVE++A  HR  NT+P K
Sbjct: 6  KADLAKLRLKEMEKVKNKEAETHKAVESKKASIEAKRELRKLKVEDRAKMHRCTNTVPKK 65

Query: 83 CFGMCQD 90
          CFG+C D
Sbjct: 66 CFGICND 72

[Close]

BLAST of Tan0004525 vs. NCBI nr
Match: XP_004140777.2 (remorin [Cucumis sativus])

HSP 1 Score: 89.4 bits (220), Expect = 2.4e-14
Identity = 54/70 (77.14%), Postives = 62/70 (88.57%), Query Frame = 0


Query: 1   MASTEVWKSTKKAALEAEVKKMEADLEKLRLKEMEKVKNKEAETNKVVELKKVSIEAKRE 60
           +ASTE WK++KKAALEAEVKK++ADL KLRL+ MEKVKNKEAET+K VE KK SIEAKRE
Sbjct: 38  LASTEAWKNSKKAALEAEVKKIDADLVKLRLRGMEKVKNKEAETHKAVESKKASIEAKRE 97

Query: 61  HQKLKVEEKA 71
            +KLKVE KA
Sbjct: 98  LKKLKVEGKA 107

[Close]

BLAST of Tan0004525 vs. NCBI nr
Match: XP_018506228.1 (PREDICTED: remorin-like [Pyrus x bretschneideri] >KAB2596666.1 remorin-like [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 80.5 bits (197), Expect = 1.1e-11
Identity = 48/89 (53.93%), Postives = 63/89 (70.79%), Query Frame = 0


Query: 1   MASTEVWKSTKKAALEAEVKKMEADLEKLRLKEMEKVKNKEAETNKVVELKKVSIEAKRE 60
           +A  E  K+  +  LEAE KK+E  +EK R +E+EK+KNKEA + K++E  KV IEAKR 
Sbjct: 36  LAINEERKNADQIDLEAEEKKIETKVEKHRHRELEKLKNKEAHSAKIIEDSKVRIEAKRN 95

Query: 61  HQKLKVEEKAAKHRSNNTIPTKCFGMCQD 90
            + L VE+KA K R+ NT+PTKCFGMC D
Sbjct: 96  KEHLSVEKKADKFRNANTLPTKCFGMCVD 124

[Close]

BLAST of Tan0004525 vs. NCBI nr
Match: XP_009349346.2 (PREDICTED: remorin-like [Pyrus x bretschneideri])

HSP 1 Score: 80.5 bits (197), Expect = 1.1e-11
Identity = 48/89 (53.93%), Postives = 63/89 (70.79%), Query Frame = 0


Query: 1   MASTEVWKSTKKAALEAEVKKMEADLEKLRLKEMEKVKNKEAETNKVVELKKVSIEAKRE 60
           +A  E  K+  +  LEAE KK+E  +EK R +E+EK+KNKEA + K++E  KV IEAKR 
Sbjct: 91  LAINEERKNADQIDLEAEEKKIETKVEKHRHRELEKLKNKEAHSAKIIEDSKVRIEAKRN 150

Query: 61  HQKLKVEEKAAKHRSNNTIPTKCFGMCQD 90
            + L VE+KA K R+ NT+PTKCFGMC D
Sbjct: 151 KEHLSVEKKADKFRNANTLPTKCFGMCVD 179

[Close]

BLAST of Tan0004525 vs. ExPASy TrEMBL
Match: A0A0A0L6I9 (Remorin_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G182090 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 4.0e-23
Identity = 65/89 (73.03%), Postives = 75/89 (84.27%), Query Frame = 0


Query: 1   MASTEVWKSTKKAALEAEVKKMEADLEKLRLKEMEKVKNKEAETNKVVELKKVSIEAKRE 60
           +ASTE WK++KKAALEAEVKK++ADL KLRL+ MEKVKNKEAET+K VE KK SIEAKRE
Sbjct: 38  LASTEAWKNSKKAALEAEVKKIDADLVKLRLRGMEKVKNKEAETHKAVESKKASIEAKRE 97

Query: 61  HQKLKVEEKAAKHRSNNTIPTKCFGMCQD 90
            +KLKVE KA  HR  NT+P KCFG+C D
Sbjct: 98  LKKLKVEGKAKVHRCTNTVPKKCFGICND 126

[Close]

BLAST of Tan0004525 vs. ExPASy TrEMBL
Match: A0A5D3DHT0 (Remorin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00180 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 3.0e-15
Identity = 49/67 (73.13%), Postives = 56/67 (83.58%), Query Frame = 0


Query: 23 EADLEKLRLKEMEKVKNKEAETNKVVELKKVSIEAKREHQKLKVEEKAAKHRSNNTIPTK 82
          +ADL KLRLKEMEKVKNKEAET+K VE KK SIEAKRE +KLKVE++A  HR  NT+P K
Sbjct: 6  KADLAKLRLKEMEKVKNKEAETHKAVESKKASIEAKRELRKLKVEDRAKMHRCTNTVPKK 65

Query: 83 CFGMCQD 90
          CFG+C D
Sbjct: 66 CFGICND 72

[Close]

BLAST of Tan0004525 vs. ExPASy TrEMBL
Match: A0A5N5F0X1 (Remorin-like OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_032116 PE=3 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 5.4e-12
Identity = 48/89 (53.93%), Postives = 63/89 (70.79%), Query Frame = 0


Query: 1   MASTEVWKSTKKAALEAEVKKMEADLEKLRLKEMEKVKNKEAETNKVVELKKVSIEAKRE 60
           +A  E  K+  +  LEAE KK+E  +EK R +E+EK+KNKEA + K++E  KV IEAKR 
Sbjct: 36  LAINEERKNADQIDLEAEEKKIETKVEKHRHRELEKLKNKEAHSAKIIEDSKVRIEAKRN 95

Query: 61  HQKLKVEEKAAKHRSNNTIPTKCFGMCQD 90
            + L VE+KA K R+ NT+PTKCFGMC D
Sbjct: 96  KEHLSVEKKADKFRNANTLPTKCFGMCVD 124

[Close]

BLAST of Tan0004525 vs. ExPASy TrEMBL
Match: A0A5E4E5K9 (PREDICTED: remorin OS=Prunus dulcis OX=3755 GN=ALMOND_2B011497 PE=3 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.2e-11
Identity = 49/88 (55.68%), Postives = 62/88 (70.45%), Query Frame = 0


Query: 2   ASTEVWKSTKKAALEAEVKKMEADLEKLRLKEMEKVKNKEAETNKVVELKKVSIEAKREH 61
           A  E  K+  +  LEA  KK+E  +EKLR KE+EK+KNKEA + KV+E  KV IEAKR H
Sbjct: 42  AINEEKKNASEIDLEALGKKIETKVEKLRHKELEKMKNKEAHSIKVIEDTKVKIEAKRTH 101

Query: 62  QKLKVEEKAAKHRSNNTIPTKCFGMCQD 90
              KVE+KA K R +N++PTKCFG+C D
Sbjct: 102 GLQKVEKKAEKFRGSNSLPTKCFGVCAD 129

[Close]

BLAST of Tan0004525 vs. ExPASy TrEMBL
Match: A0A540MYQ2 (Remorin_C domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_010452 PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.6e-11
Identity = 48/89 (53.93%), Postives = 62/89 (69.66%), Query Frame = 0


Query: 1   MASTEVWKSTKKAALEAEVKKMEADLEKLRLKEMEKVKNKEAETNKVVELKKVSIEAKRE 60
           +A  E  K+  +  LEAE KK+E  +EK R +E+EK+KNKEA + K++E  KV IEAKR 
Sbjct: 60  LAINEERKNADQIDLEAEEKKIETKVEKHRHRELEKLKNKEAHSAKIIEDSKVRIEAKRN 119

Query: 61  HQKLKVEEKAAKHRSNNTIPTKCFGMCQD 90
              L VE+KA K R+ NT+PTKCFGMC D
Sbjct: 120 KGHLNVEKKADKFRNANTLPTKCFGMCVD 148

[Close]

BLAST of Tan0004525 vs. TAIR 10
Match: AT5G23750.1 (Remorin family protein )

HSP 1 Score: 67.8 bits (164), Expect = 6.9e-12
Identity = 42/85 (49.41%), Postives = 59/85 (69.41%), Query Frame = 0


Query: 1   MASTEVWKSTKKAALEAEVKKMEADLEKLRLKEMEKVKNKEAETNKVVELKKVSIEAKRE 60
           ++S   W++ KKAA+EAE+KKME  LEK + + +E++KNK A+ +K  E K+  IEAKR 
Sbjct: 116 LSSIGSWENNKKAAVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRG 175

Query: 61  HQKLKVEEKAAKHRSNNTIPTKCFG 86
            + LK EE AAK+R+  T P K FG
Sbjct: 176 EEILKAEELAAKYRATGTAPKKLFG 200

[Close]

BLAST of Tan0004525 vs. TAIR 10
Match: AT5G23750.2 (Remorin family protein )

HSP 1 Score: 67.8 bits (164), Expect = 6.9e-12
Identity = 42/85 (49.41%), Postives = 59/85 (69.41%), Query Frame = 0


Query: 1   MASTEVWKSTKKAALEAEVKKMEADLEKLRLKEMEKVKNKEAETNKVVELKKVSIEAKRE 60
           ++S   W++ KKAA+EAE+KKME  LEK + + +E++KNK A+ +K  E K+  IEAKR 
Sbjct: 115 LSSIGSWENNKKAAVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRG 174

Query: 61  HQKLKVEEKAAKHRSNNTIPTKCFG 86
            + LK EE AAK+R+  T P K FG
Sbjct: 175 EEILKAEELAAKYRATGTAPKKLFG 199

[Close]

BLAST of Tan0004525 vs. TAIR 10
Match: AT3G48940.1 (Remorin family protein )

HSP 1 Score: 63.2 bits (152), Expect = 1.7e-10
Identity = 39/85 (45.88%), Postives = 56/85 (65.88%), Query Frame = 0


Query: 1   MASTEVWKSTKKAALEAEVKKMEADLEKLRLKEMEKVKNKEAETNKVVELKKVSIEAKRE 60
           ++S   W+++KKA++EAE+KK+E  L K +    E++KNK A+ +K  E K+   EAKR 
Sbjct: 89  ISSVGAWENSKKASVEAELKKIEEQLNKKKAHYTEQMKNKIAQIHKEAEEKRAMTEAKRG 148

Query: 61  HQKLKVEEKAAKHRSNNTIPTKCFG 86
              LK EE AAK+R+  T PTK FG
Sbjct: 149 EDVLKAEEMAAKYRATGTAPTKLFG 173

[Close]

BLAST of Tan0004525 vs. TAIR 10
Match: AT3G61260.1 (Remorin family protein )

HSP 1 Score: 58.2 bits (139), Expect = 5.5e-09
Identity = 36/85 (42.35%), Postives = 54/85 (63.53%), Query Frame = 0


Query: 1   MASTEVWKSTKKAALEAEVKKMEADLEKLRLKEMEKVKNKEAETNKVVELKKVSIEAKRE 60
           +A    W+++KKAA+EA++KK+E  LEK + +  E++KNK A  +K  E ++  IEAKR 
Sbjct: 126 IADVHAWENSKKAAVEAQLKKIEEQLEKKKAEYAERMKNKVAAIHKEAEERRAMIEAKRG 185

Query: 61  HQKLKVEEKAAKHRSNNTIPTKCFG 86
              LK EE AAK+R+   +P    G
Sbjct: 186 EDVLKAEETAAKYRATGIVPKATCG 210

[Close]

BLAST of Tan0004525 vs. TAIR 10
Match: AT2G45820.1 (Remorin family protein )

HSP 1 Score: 56.2 bits (134), Expect = 2.1e-08
Identity = 33/85 (38.82%), Postives = 55/85 (64.71%), Query Frame = 0


Query: 1   MASTEVWKSTKKAALEAEVKKMEADLEKLRLKEMEKVKNKEAETNKVVELKKVSIEAKRE 60
           ++    W+++KKAA+EA+++K+E  LEK + +  EK+KNK A  +K+ E K+  +EAK+ 
Sbjct: 104 ISDVHAWENSKKAAVEAQLRKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKG 163

Query: 61  HQKLKVEEKAAKHRSNNTIPTKCFG 86
            + LK EE  AK+R+   +P    G
Sbjct: 164 EELLKAEEMGAKYRATGVVPKATCG 188

The following BLAST results are available for this feature:

BLAST of Tan0004525 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFA5	9.7e-11	49.41	Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1	[more]
P93788	1.8e-09	51.25	Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1	[more]
Q9M2D8	7.7e-08	42.35	Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 P...	[more]
O80837	2.9e-07	38.82	Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1	[more]

BLAST of Tan0004525 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN57373.1	8.2e-23	73.03	hypothetical protein Csa_010046 [Cucumis sativus]	[more]
KAA0033641.1	6.3e-15	73.13	remorin-like [Cucumis melo var. makuwa] >TYK22940.1 remorin-like [Cucumis melo v...	[more]
XP_004140777.2	2.4e-14	77.14	remorin [Cucumis sativus]	[more]
XP_018506228.1	1.1e-11	53.93	PREDICTED: remorin-like [Pyrus x bretschneideri] >KAB2596666.1 remorin-like [Pyr...	[more]
XP_009349346.2	1.1e-11	53.93	PREDICTED: remorin-like [Pyrus x bretschneideri]	[more]

BLAST of Tan0004525 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6I9	4.0e-23	73.03	Remorin_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G182090 P...	[more]
A0A5D3DHT0	3.0e-15	73.13	Remorin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00180 P...	[more]
A0A5N5F0X1	5.4e-12	53.93	Remorin-like OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_032116 PE...	[more]
A0A5E4E5K9	1.2e-11	55.68	PREDICTED: remorin OS=Prunus dulcis OX=3755 GN=ALMOND_2B011497 PE=3 SV=1	[more]
A0A540MYQ2	1.6e-11	53.93	Remorin_C domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_010452 P...	[more]

BLAST of Tan0004525 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23750.1	6.9e-12	49.41	Remorin family protein	[more]
AT5G23750.2	6.9e-12	49.41	Remorin family protein	[more]
AT3G48940.1	1.7e-10	45.88	Remorin family protein	[more]
AT3G61260.1	5.5e-09	42.35	Remorin family protein	[more]
AT2G45820.1	2.1e-08	38.82	Remorin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 12..39
None	No IPR available	PANTHER	PTHR31775	OS02G0117200 PROTEIN	coord: 2..85
None	No IPR available	PANTHER	PTHR31775:SF31	CARBOXY-TERMINAL REGION REMORIN	coord: 2..85
IPR005516	Remorin, C-terminal	PFAM	PF03763	Remorin_C	coord: 4..82 e-value: 6.0E-13 score: 48.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0004525.1	Tan0004525.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010033	response to organic substance
biological_process	GO:1901700	response to oxygen-containing compound
biological_process	GO:0006950	response to stress