
Tan0004422 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAACGAAAGCCCTAACTGCTCTTCTCCACGCTGCTGCTTCTTCTTCTTCTTCTTCTTCATCACGCAGGTCGGTGTCGCCGCCCCCTCTCTCTAGTTCGCTGCTGCCGCCGCCGTGGTTTCTTCCGCTCGTACCGCCTCCACCATCGTACGCGCCTCTCCTCTCGCAGTTCTGACCTCCTCTGTCCTCTCTCCCCCATTGCACGACGCACAACGCCTCCTCTCTCATTTTGAGCTTCAACTCGTTCTTGTCACCCACGCTCGTCGCCGTCACCGTTGGTTGCTTCCTCTGATTATCGTCATCATCGCCCAGATCAAGTATGTTATGCGCTGTTTTTTTTTTAAAAAAATAAAACTTAGCTTTTGGGAATAAAATAATCTAGATTTGTTAGCTTTGATTTATTCTCAAGTGTTGTTCTTCTTCCATCTTTGATTTGATTTTTTTCGTTTTTCTAGTTTGCAATTGCAGCGCTTGTGTGATTGAATTGTATATGTTGATTCGGTTGAGGACTAAAAATTTTGGCTTTTTTTTCATATTGCTTGTGTGGTATGGATCTGGTGTTTGATTTCTAAAATTTTTATAACTTTTTTGTGTTTAGATATAATTTAACTATAATCTGAACTCGATGGTCCACTGGGATTTTTCAGGAATGAAATTTTCAGATTAATTTTCTGAGGATTTCTAGGTATTGGCGATTATCGGATTGTGATTTTGATTCTTGAAATTTTCAATTGTATAGATTTTTATTTTGTTTTTTCTCCATTTTAGTTTAAAAAAGGAATTTGAACAACCCCACGATGCAACCCAACCCAACTCGAAAAAAGAAGGGTTGGGTTGGGCTGGGTTGCCCACCGTTTTCGGATGTTTCGGACCCTTCGGGTTGGTCCAAAAAAATCCCCCAACTCAACCCGTGTACACCTCTATAGATAGCTGCCTTATTTTTATGTCTCGAACTGTGATATGATAAATTATAACCTCAAATGTAGAAGGTATGTAAAATCAATATACTTCTTGTTTGAAGTTGAATGACACCAATTTTCCTTTTGTTAGATAATGCGTCAATTTTAGATGATTTCAGTGTGTTTTTCTTCTTCTACTTGAGGGTTTCTCCCCTTGAAAATTTAGGATTTGGACTTTCTGTTCAAGATGCTCTTTTGCAGTAATTTTTGAATAACTCTTCCCAATTCTTGAAACTATTGGCACCAAGTTGAGTGATTTCAGCTCCATTTTGCCTTCAGGTTTTGGTTTTTAAGGGATACATAGTTGTTGTGGCACTTTCAGAGAGGGGTATAGTTTGACCATGCAAAACCTGCATCATTTAATTTGTCGTCTCAGTTCCACGTCTATTGGGAAGAGCACAAATACTTCGAGACTTCTAAAAGAAAATGTGGGATCTAATTTAATTATTGATTCAGTTTCAACATTGAAGCATGCTCAAGGAGCTTGGTTAACCACTTTGAGAGAGTTCTCTGCAAAATCTGGTGGATTTGATGAAGGTGATGCTAAGAATGAATGGGATAAGAGTGTAAGTGATGCTGGCACCATGTCAGATGATTTAGGTTGGGATTCTGTTTCCTCCTGGTCGACTGGATTGACCAAAGAGCATTTTGATGGAGAGGCTGTTGGCCGCAGGACTAGTGGGGGAGGAGATTCCCCAAAATCACCACAGTCTTCATTAGTTTCTGGGTTGCAAGAGATTGAGGACAGAATAAGGGAATTAGAGGCAGAAAACCGAAAAAGCAAGGACTTTGTGGACATGTGGGGTGAAAGGATGAGGGAGATGAGCGTGCTTTTGAAACAAGTAAGAGAGCCTGGTGCTAGAGGGTCTTATCTCAAGGACTCAGAGAAGGCAGAGATGTATCGCTTGCACAAGGAAAACCCTGAGATATATACTGTTGAGAAGCTTGCTGAAGATTACAGGATCATGAGGCAAAGGGTTCACGCCATTCTTTGGCTGAAAGAACTTGAAGAGGAAGAAGAGAAAAAGCTGGGCCACCCCTTGGATGATTCTGTTGAGCTTTTACTCGATACTTGCCCTGAGTATGTTACAAATCCCTATATTGTCTTGTATCCTGGTGCTTAATAGGTAGTCTTATATTCACTTGTTATAAAATTTGAGATGAATATTAGCATAGCATCTTATGAATGATTTACTCCTGTATCTTTCTGTCTTTGCAAAATCAATTTCACCGTGGAAAAAGAAAATGTAAATTGTAAACATAGTCCTTATTACTCTTTTTCTATAATATCTTAATTTAAGTTTCTTTTTGGGGGGAAAATGCCATGGACAGCACATTTTGGTACCAGTACATCTGTTTTGTTATTTTGTAGTTTTTGTTTACAAACTTTTTTTATCTTCATTGTTATGAAGATACATGTTTCCTTGTCTACCTTTCGATTGGGCTTTTGAGATTTTTGGTTGAATAAATTATAAAGGATGTGAAATTTGCAGTCATATAATAAAACTTTCCTCCAACTAATTACCTTTTTTGTTGGGGGATAAGAAACTAGATACTTTCCATTAAGATTTTGAAGAGAGCATTCAAGGGATCTACAAGACCAAGGAGCATACCTTATGTTTTAATTGCAACTTTTGGTCCTTTTCTTCCTAAAACCATTTGAGCTATTGAACATATTAGTTTTGACTTGTATTTTAACTTTTAAGTTTGATTATCTATGAGCTAGACAGTAATAATGTTTTATTTACTGACTTTCAATTTCAACTTTTTACCTTTTTCTTTCTTGACCCATTTGAGTGATTGAATTCAATCTAGCTTTTCTTGACACATAATTTTATGGATTCCTCGAAGTTCCATGTTTCAAAGGTTTTTTGTTTTCGTATTTTTAGCAGATGATTTGCTATCTAAGATTTTTTTCATTGTCTTAATGCTCCCAATGTTTGATTGGTTTCGAAGGCAAATAATTTCCATGTCCCCGTGTAAAAGATTTCTAAGTTTGACATGTATAAACTCAATTTACCATCGATCTTTTCTTCCTTATGGTCAATTTGGCATTACTTCTTGCAGATTCTTCAAGTCCCATGACCGGGAATTCCATGTGGCATCCCTTCCGTACAAACCTGATTTCAAGGTTATGCCGGAGGGTTGGGATGGTACAACCAGAGATTTGGATGAAGTCCATTACGAGATCTCCCAAAAAGAAGACGATATGCTATATAAAGAATTTGTCGAGAAGATGAATTTCAACAAAAAGAAAGTAAGTTCTGTTGTACTCTTGTTACACTATTTGGATGTGAAATGGTCAAGTGAGTAATGAGAGAGAATCTTCTTGAAGCCATTTACCATATGATTCTTACTTGACTGGACTTGGATTTGGATGGTTCTGAAATGTGAAACTGTTATTAATGATGAAAATGGATTCGATCAGGGGAATGTTAGAATGGCTTTCTTTTCTATGTTACCCCCTCTCCTCTCCCTAGTCTCAACAAATGATGTCGAATGATATAATGGTGTACGAATGTAAACGAACTCGATTTTCCATTTTCCCAGAATAATATGTTTCTTTGAAATGCAGATTGCAGGAGAGGTCTTTCGCCACAAATATAGTAGGCGTCGGGCAGCAGATGGGTGGAAATTCACAATAGAGAAAATGGGACCCCGAGGGAAACGGGGAAGTGGCGGTGGATGGAAGTTTGTTAGCTTGCCTGATGGTTCTAGTAGGCCATTGAACGAAATGGAGAAGATGTATGTGAGGCGAGAGACACCTCGCCATCGACGTAAAATCCTTCCATGATAAGTTTCGAGAACACACATCTCGTTTTGTTTGTGTATTTGATGAAATAGTTAGTTTAAAAGAAACTGGTAGATCCCCCAGGATGATTTCAAAATTTTCCTCTGTGACATCATCTGAAGTAGGGTTCCCTTTTTTCACTGACCTGTTTTTGGTTGAACTCTTTGCAAATGTTGTAGGTTTCCCTGATAGTTCAATATCTGCAATAACAGGTTTTTTTTTTGCCCTTCCTCTCAATGATGGGATGATATTTTGGTATCTTATTTCCAATGCCATCTTCCAAATAATGTAGCTCAAGGATGAAAGAGTTGGAGGAACATATTGATTATGTAGTTGAAATATTTTATTTTTCTTGTTCATTACTTTATTAGAGGCTTTATTGCATCACTTGTACAAATGGTGCTTTATGTCAAATAATTTTGAAACTCAATGATCATTTCTAAGAAGTAAGAACTGATAACATATTGATCTTTCTTTTGAAC AAAAAAACGAAAGCCCTAACTGCTCTTCTCCACGCTGCTGCTTCTTCTTCTTCTTCTTCTTCATCACGCAGGTCGGTGTCGCCGCCCCCTCTCTCTAGTTCGCTGCTGCCGCCGCCGTGGTTTCTTCCGCTCGTACCGCCTCCACCATCGTACGCGCCTCTCCTCTCGCAGTTCTGACCTCCTCTGTCCTCTCTCCCCCATTGCACGACGCACAACGCCTCCTCTCTCATTTTGAGCTTCAACTCGTTCTTGTCACCCACGCTCGTCGCCGTCACCGTTGGTTGCTTCCTCTGATTATCGTCATCATCGCCCAGATCAACTCCATTTTGCCTTCAGGTTTTGGTTTTTAAGGGATACATAGTTGTTGTGGCACTTTCAGAGAGGGGTATAGTTTGACCATGCAAAACCTGCATCATTTAATTTGTCGTCTCAGTTCCACGTCTATTGGGAAGAGCACAAATACTTCGAGACTTCTAAAAGAAAATGTGGGATCTAATTTAATTATTGATTCAGTTTCAACATTGAAGCATGCTCAAGGAGCTTGGTTAACCACTTTGAGAGAGTTCTCTGCAAAATCTGGTGGATTTGATGAAGGTGATGCTAAGAATGAATGGGATAAGAGTGTAAGTGATGCTGGCACCATGTCAGATGATTTAGGTTGGGATTCTGTTTCCTCCTGGTCGACTGGATTGACCAAAGAGCATTTTGATGGAGAGGCTGTTGGCCGCAGGACTAGTGGGGGAGGAGATTCCCCAAAATCACCACAGTCTTCATTAGTTTCTGGGTTGCAAGAGATTGAGGACAGAATAAGGGAATTAGAGGCAGAAAACCGAAAAAGCAAGGACTTTGTGGACATGTGGGGTGAAAGGATGAGGGAGATGAGCGTGCTTTTGAAACAAGTAAGAGAGCCTGGTGCTAGAGGGTCTTATCTCAAGGACTCAGAGAAGGCAGAGATGTATCGCTTGCACAAGGAAAACCCTGAGATATATACTGTTGAGAAGCTTGCTGAAGATTACAGGATCATGAGGCAAAGGGTTCACGCCATTCTTTGGCTGAAAGAACTTGAAGAGGAAGAAGAGAAAAAGCTGGGCCACCCCTTGGATGATTCTGTTGAGCTTTTACTCGATACTTGCCCTGAATTCTTCAAGTCCCATGACCGGGAATTCCATGTGGCATCCCTTCCGTACAAACCTGATTTCAAGGTTATGCCGGAGGGTTGGGATGGTACAACCAGAGATTTGGATGAAGTCCATTACGAGATCTCCCAAAAAGAAGACGATATGCTATATAAAGAATTTGTCGAGAAGATGAATTTCAACAAAAAGAAAATTGCAGGAGAGGTCTTTCGCCACAAATATAGTAGGCGTCGGGCAGCAGATGGGTGGAAATTCACAATAGAGAAAATGGGACCCCGAGGGAAACGGGGAAGTGGCGGTGGATGGAAGTTTGTTAGCTTGCCTGATGGTTCTAGTAGGCCATTGAACGAAATGGAGAAGATGTATGTGAGGCGAGAGACACCTCGCCATCGACGTAAAATCCTTCCATGATAAGTTTCGAGAACACACATCTCGTTTTGTTTGTGTATTTGATGAAATAGTTAGTTTAAAAGAAACTGGTAGATCCCCCAGGATGATTTCAAAATTTTCCTCTGTGACATCATCTGAAGTAGGGTTCCCTTTTTTCACTGACCTGTTTTTGGTTGAACTCTTTGCAAATGTTGTAGGTTTCCCTGATAGTTCAATATCTGCAATAACAGGTTTTTTTTTTGCCCTTCCTCTCAATGATGGGATGATATTTTGGTATCTTATTTCCAATGCCATCTTCCAAATAATGTAGCTCAAGGATGAAAGAGTTGGAGGAACATATTGATTATGTAGTTGAAATATTTTATTTTTCTTGTTCATTACTTTATTAGAGGCTTTATTGCATCACTTGTACAAATGGTGCTTTATGTCAAATAATTTTGAAACTCAATGATCATTTCTAAGAAGTAAGAACTGATAACATATTGATCTTTCTTTTGAAC ATGCAAAACCTGCATCATTTAATTTGTCGTCTCAGTTCCACGTCTATTGGGAAGAGCACAAATACTTCGAGACTTCTAAAAGAAAATGTGGGATCTAATTTAATTATTGATTCAGTTTCAACATTGAAGCATGCTCAAGGAGCTTGGTTAACCACTTTGAGAGAGTTCTCTGCAAAATCTGGTGGATTTGATGAAGGTGATGCTAAGAATGAATGGGATAAGAGTGTAAGTGATGCTGGCACCATGTCAGATGATTTAGGTTGGGATTCTGTTTCCTCCTGGTCGACTGGATTGACCAAAGAGCATTTTGATGGAGAGGCTGTTGGCCGCAGGACTAGTGGGGGAGGAGATTCCCCAAAATCACCACAGTCTTCATTAGTTTCTGGGTTGCAAGAGATTGAGGACAGAATAAGGGAATTAGAGGCAGAAAACCGAAAAAGCAAGGACTTTGTGGACATGTGGGGTGAAAGGATGAGGGAGATGAGCGTGCTTTTGAAACAAGTAAGAGAGCCTGGTGCTAGAGGGTCTTATCTCAAGGACTCAGAGAAGGCAGAGATGTATCGCTTGCACAAGGAAAACCCTGAGATATATACTGTTGAGAAGCTTGCTGAAGATTACAGGATCATGAGGCAAAGGGTTCACGCCATTCTTTGGCTGAAAGAACTTGAAGAGGAAGAAGAGAAAAAGCTGGGCCACCCCTTGGATGATTCTGTTGAGCTTTTACTCGATACTTGCCCTGAATTCTTCAAGTCCCATGACCGGGAATTCCATGTGGCATCCCTTCCGTACAAACCTGATTTCAAGGTTATGCCGGAGGGTTGGGATGGTACAACCAGAGATTTGGATGAAGTCCATTACGAGATCTCCCAAAAAGAAGACGATATGCTATATAAAGAATTTGTCGAGAAGATGAATTTCAACAAAAAGAAAATTGCAGGAGAGGTCTTTCGCCACAAATATAGTAGGCGTCGGGCAGCAGATGGGTGGAAATTCACAATAGAGAAAATGGGACCCCGAGGGAAACGGGGAAGTGGCGGTGGATGGAAGTTTGTTAGCTTGCCTGATGGTTCTAGTAGGCCATTGAACGAAATGGAGAAGATGTATGTGAGGCGAGAGACACCTCGCCATCGACGTAAAATCCTTCCATGA MQNLHHLICRLSSTSIGKSTNTSRLLKENVGSNLIIDSVSTLKHAQGAWLTTLREFSAKSGGFDEGDAKNEWDKSVSDAGTMSDDLGWDSVSSWSTGLTKEHFDGEAVGRRTSGGGDSPKSPQSSLVSGLQEIEDRIRELEAENRKSKDFVDMWGERMREMSVLLKQVREPGARGSYLKDSEKAEMYRLHKENPEIYTVEKLAEDYRIMRQRVHAILWLKELEEEEEKKLGHPLDDSVELLLDTCPEFFKSHDREFHVASLPYKPDFKVMPEGWDGTTRDLDEVHYEISQKEDDMLYKEFVEKMNFNKKKIAGEVFRHKYSRRRAADGWKFTIEKMGPRGKRGSGGGWKFVSLPDGSSRPLNEMEKMYVRRETPRHRRKILP Homology
BLAST of Tan0004422 vs. ExPASy Swiss-Prot
Match: Q9LVA9 (Protein GAMETE CELL DEFECTIVE 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GCD1 PE=1 SV=1) HSP 1 Score: 449.1 bits (1154), Expect = 4.9e-125 Identity = 243/397 (61.21%), Postives = 289/397 (72.80%), Query Frame = 0
BLAST of Tan0004422 vs. ExPASy Swiss-Prot
Match: Q8S2G4 (Protein GAMETE CELL DEFECTIVE 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=GCD1 PE=2 SV=1) HSP 1 Score: 429.5 bits (1103), Expect = 4.0e-119 Identity = 210/292 (71.92%), Postives = 247/292 (84.59%), Query Frame = 0
BLAST of Tan0004422 vs. ExPASy Swiss-Prot
Match: A2WW22 (Protein GAMETE CELL DEFECTIVE 1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=GCD1 PE=3 SV=1) HSP 1 Score: 429.1 bits (1102), Expect = 5.2e-119 Identity = 210/292 (71.92%), Postives = 247/292 (84.59%), Query Frame = 0
BLAST of Tan0004422 vs. NCBI nr
Match: XP_022154030.1 (uncharacterized protein LOC111021386 [Momordica charantia]) HSP 1 Score: 714.5 bits (1843), Expect = 4.8e-202 Identity = 357/384 (92.97%), Postives = 370/384 (96.35%), Query Frame = 0
BLAST of Tan0004422 vs. NCBI nr
Match: XP_038906006.1 (protein GAMETE CELL DEFECTIVE 1, mitochondrial [Benincasa hispida]) HSP 1 Score: 710.3 bits (1832), Expect = 9.0e-201 Identity = 356/384 (92.71%), Postives = 370/384 (96.35%), Query Frame = 0
BLAST of Tan0004422 vs. NCBI nr
Match: XP_022965080.1 (uncharacterized protein LOC111465050 [Cucurbita maxima]) HSP 1 Score: 694.5 bits (1791), Expect = 5.1e-196 Identity = 350/384 (91.15%), Postives = 361/384 (94.01%), Query Frame = 0
BLAST of Tan0004422 vs. NCBI nr
Match: XP_023553278.1 (uncharacterized protein LOC111810742 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 694.1 bits (1790), Expect = 6.7e-196 Identity = 349/384 (90.89%), Postives = 361/384 (94.01%), Query Frame = 0
BLAST of Tan0004422 vs. NCBI nr
Match: TYK12013.1 (uncharacterized protein E5676_scaffold1017G00220 [Cucumis melo var. makuwa]) HSP 1 Score: 681.0 bits (1756), Expect = 5.8e-192 Identity = 340/384 (88.54%), Postives = 363/384 (94.53%), Query Frame = 0
BLAST of Tan0004422 vs. ExPASy TrEMBL
Match: A0A6J1DIH3 (uncharacterized protein LOC111021386 OS=Momordica charantia OX=3673 GN=LOC111021386 PE=4 SV=1) HSP 1 Score: 714.5 bits (1843), Expect = 2.3e-202 Identity = 357/384 (92.97%), Postives = 370/384 (96.35%), Query Frame = 0
BLAST of Tan0004422 vs. ExPASy TrEMBL
Match: A0A6J1HMP6 (uncharacterized protein LOC111465050 OS=Cucurbita maxima OX=3661 GN=LOC111465050 PE=4 SV=1) HSP 1 Score: 694.5 bits (1791), Expect = 2.5e-196 Identity = 350/384 (91.15%), Postives = 361/384 (94.01%), Query Frame = 0
BLAST of Tan0004422 vs. ExPASy TrEMBL
Match: A0A5D3CJ95 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00220 PE=4 SV=1) HSP 1 Score: 681.0 bits (1756), Expect = 2.8e-192 Identity = 340/384 (88.54%), Postives = 363/384 (94.53%), Query Frame = 0
BLAST of Tan0004422 vs. ExPASy TrEMBL
Match: A0A1S4DXD4 (uncharacterized protein LOC103490896 OS=Cucumis melo OX=3656 GN=LOC103490896 PE=4 SV=1) HSP 1 Score: 681.0 bits (1756), Expect = 2.8e-192 Identity = 340/384 (88.54%), Postives = 363/384 (94.53%), Query Frame = 0
BLAST of Tan0004422 vs. ExPASy TrEMBL
Match: A0A6J1E998 (uncharacterized protein LOC111431066 OS=Cucurbita moschata OX=3662 GN=LOC111431066 PE=4 SV=1) HSP 1 Score: 680.6 bits (1755), Expect = 3.7e-192 Identity = 345/384 (89.84%), Postives = 357/384 (92.97%), Query Frame = 0
BLAST of Tan0004422 vs. TAIR 10
Match: AT5G62270.1 (BEST Arabidopsis thaliana protein match is: mucin-related (TAIR:AT2G02880.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 450.3 bits (1157), Expect = 1.6e-126 Identity = 244/396 (61.62%), Postives = 289/396 (72.98%), Query Frame = 0
BLAST of Tan0004422 vs. TAIR 10
Match: AT5G62270.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: mucin-related (TAIR:AT2G02880.1). ) HSP 1 Score: 449.1 bits (1154), Expect = 3.5e-126 Identity = 243/397 (61.21%), Postives = 289/397 (72.80%), Query Frame = 0
BLAST of Tan0004422 vs. TAIR 10
Match: AT2G02880.1 (mucin-related ) HSP 1 Score: 129.0 bits (323), Expect = 8.0e-30 Identity = 80/232 (34.48%), Postives = 129/232 (55.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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