Tan0004412 (gene) Snake gourd v1

Overview


Name	Tan0004412
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	t-SNARE coiled-coil homology domain-containing protein
Location	LG07: 2413634 .. 2415525 (-)
RNA-Seq Expression	Tan0004412
Synteny	Tan0004412

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCAGGTAAATTATATGTATCCAGTGTAGTCTCTTTATTCAACAATGAAGACTACTTACTGGTCAATGGTTGTGGTTTAGAACCCTTTGTTTTCTCGCATATGCAGGATCAAGGATTGGACATGATATCATAAGGGTTGGATACTCTGAAGAACATGGCTCATGATATGAACGAGGTTCTATATCTTCTGTGCCTCAGTCTTTTCTTTTTTTCCTCATCAACATATTAGTTGATTGTGATTGTGGCATGTTATTTACAGGAAATAGACAAGCAAGTTCCTTTGATGGACGAGATCAACACTAAGGTAACGATATCTTTCTCATTATATATATATATAATATATTTTTATGCATACATACATATATGTATATTATATACTTGCAGTTTCAGTGTTCATATTTATAATCATCACCAAATGTGTCTTTTGAATCATGTCAGGTGGACAAGGTTGCATCTGACCTTAAGAACACCAACGCCAGATTAAAGGACACAGTTAACCAGGTTTTGCTTTGTTCCTTTAATTTCTTTTTTTTAATCTTTATTGTCAGTTCCTGAAGTGTATATTCATGTGCACATATGTGCTAATCCTCGTGCATGCACAATTCCTAGATTTATATGTATATATGTAAGACGTTTGTGGGTTTATCTAATGTGAGTTTTATTTTTCTACAGCTAAGGTCCAACAGAAATTTCTGTATTGATATCATTTTGTTGCGTATAATCTTGGGTATTGCTCCCTATCTATATACAAGTAAGTTCTTACATTCAGATTTTTGTTTTTTGGATTCTGATGTGTGGAGTTAGTCTTAGTTTAGTTTGTCCTAGGTTGGACGTGTTTGATGCATAGAGTGTTAGTATTCAGTTTGTTTGATAATTTTGAATTGGATCTAGGATGCATAACTTTATTTTACATGAATGACAATTTTTGCTTTTATAATTTTTTTCAGCTCTTGAGCGAGGAGGCCTTTGATTTCTCAAGGGTAGAGATGACACAACAAAACAAATCCAAAGAGCTTAAACAATATTTGAGCATGTAAATAAATAGCTTGTATTTTCCTAATATGTTGAATCTTTTGTAAGTGTTGTTTTGTCGCTCATTGTAGTTTTCTTCGAATTTTGTTCTAAATCATCATGCACGATATATTTGTTGTATAAAAATGTAATAACTATTGAGATTTTATTTTGTATGTAAAGAAAAAGAAATATTGCTAGCAACAAATTTTTTTATTCAATTATTGACAAAAGATGACGAACATTGCCAACCATTAAAAGTTGGTTTTCCATGACGGACAAAATCCATCATTAAAAGTGGATGCCAACCCAAAATATGTCACCTTTTAATGACGGTCGAAGACCTTTAATGACGAGCATTGTAAGATACAATGACAATCGCTTTGATGACGGACGCACGCCCATCATTAAAACCCTCTTTTCTACTAGTGCAAAACCCTCAAGACAAGTCTGCACTCGAGAACAAGCTTTAAAACCCTAAAGATAAATCTACATTCGAGAACAAGTTGCGAAGCCCTCGAGACAAGACCACATTTGAGAACAAGTTGCAAAGCCCTCGAACAATTGTACATGAGAGAAAAAAATCAAAAGAGAAACATTAGAGACTGTAACTCGCAACATTCAAATTAATAAAAATACAACGTTCAATTACACGTGTCTCATTTCTATTGTTTTACTAAAATCACGTGTGAACAGTGATTATCGGAAATGGAAACATCAAATGGAAGAGGAAAACATAAACTCCATGGGGTTGTGTTTCAAAACTAGGAGTTTTGAACCCCTTGTACCAAACATGGTTTTGGGTTGGGACCATCCCAACCTAAAACCATGGGCAACACACCCTCTAAGAGTATTAATGAAACTTTTGAAAGTTTAG

mRNA sequence

ATGAAGCAGGAAATAGACAAGCAAGTTCCTTTGATGGACGAGATCAACACTAAGGTGGACAAGGTTGCATCTGACCTTAAGAACACCAACGCCAGATTAAAGGACACAGTTAACCAGCTAAGGTCCAACAGAAATTTCTGTATTGATATCATTTTGTTGCGTATAATCTTGGGTATTGCTCCCTATCTATATACAAGTAAAGTATTAATGAAACTTTTGAAAGTTTAG

Coding sequence (CDS)

ATGAAGCAGGAAATAGACAAGCAAGTTCCTTTGATGGACGAGATCAACACTAAGGTGGACAAGGTTGCATCTGACCTTAAGAACACCAACGCCAGATTAAAGGACACAGTTAACCAGCTAAGGTCCAACAGAAATTTCTGTATTGATATCATTTTGTTGCGTATAATCTTGGGTATTGCTCCCTATCTATATACAAGTAAAGTATTAATGAAACTTTTGAAAGTTTAG

Protein sequence

MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIAPYLYTSKVLMKLLKV

Homology

[Close]

BLAST of Tan0004412 vs. ExPASy Swiss-Prot
Match: Q9SF29 (Syntaxin-71 OS=Arabidopsis thaliana OX=3702 GN=SYP71 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 4.9e-21
Identity = 50/64 (78.12%), Postives = 58/64 (90.62%), Query Frame = 0


Query: 1   MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIA 60
           M +E+D+QVPLMDEI+TKVD+  SDLKNTN RLKDTVNQLRS+RNFCIDI+LL I+LGIA
Sbjct: 199 MNEELDRQVPLMDEIDTKVDRATSDLKNTNVRLKDTVNQLRSSRNFCIDIVLLCIVLGIA 258

Query: 61  PYLY 65
            YLY
Sbjct: 259 AYLY 262

[Close]

BLAST of Tan0004412 vs. ExPASy Swiss-Prot
Match: Q94KK5 (Syntaxin-73 OS=Arabidopsis thaliana OX=3702 GN=SYP73 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.3e-18
Identity = 45/66 (68.18%), Postives = 58/66 (87.88%), Query Frame = 0


Query: 1   MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIA 60
           + +E+D+Q PLMDEI+TK+DK A+DLK+TN RLKDTV +LRS+RNFCIDIILL I+LGIA
Sbjct: 196 INEELDRQEPLMDEIDTKIDKAATDLKSTNVRLKDTVTKLRSSRNFCIDIILLCILLGIA 255

Query: 61  PYLYTS 67
            ++Y S
Sbjct: 256 AFIYNS 261

[Close]

BLAST of Tan0004412 vs. ExPASy Swiss-Prot
Match: Q94KK6 (Syntaxin-72 OS=Arabidopsis thaliana OX=3702 GN=SYP72 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.6e-16
Identity = 43/66 (65.15%), Postives = 53/66 (80.30%), Query Frame = 0


Query: 1   MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIA 60
           M +E+DKQVPLM+E+ TKVD   SDLKNTN RLK  + Q+RS+RNFCIDIILL +ILGI 
Sbjct: 200 MNEELDKQVPLMEEMETKVDGATSDLKNTNVRLKKQLVQMRSSRNFCIDIILLCVILGIV 259

Query: 61  PYLYTS 67
            Y+Y +
Sbjct: 260 SYIYNA 265

[Close]

BLAST of Tan0004412 vs. NCBI nr
Match: XP_038904060.1 (syntaxin-71 [Benincasa hispida])

HSP 1 Score: 105.5 bits (262), Expect = 2.0e-19
Identity = 55/64 (85.94%), Postives = 59/64 (92.19%), Query Frame = 0


Query: 1   MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIA 60
           M +EID+QVPLMDEI+TKVDK ASDLKNTN RLKDTVNQLRS+RNFCIDIILL IILGIA
Sbjct: 197 MNEEIDRQVPLMDEIDTKVDKAASDLKNTNVRLKDTVNQLRSSRNFCIDIILLCIILGIA 256

Query: 61  PYLY 65
            YLY
Sbjct: 257 AYLY 260

[Close]

BLAST of Tan0004412 vs. NCBI nr
Match: KAA0044019.1 (syntaxin-71 [Cucumis melo var. makuwa] >TYK25121.1 syntaxin-71 [Cucumis melo var. makuwa])

HSP 1 Score: 105.5 bits (262), Expect = 2.0e-19
Identity = 55/64 (85.94%), Postives = 59/64 (92.19%), Query Frame = 0


Query: 1   MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIA 60
           M +EID+QVPLMDEI+TKVDK ASDLKNTN RLKDTVNQLRS+RNFCIDIILL IILGIA
Sbjct: 197 MNEEIDRQVPLMDEIDTKVDKAASDLKNTNVRLKDTVNQLRSSRNFCIDIILLCIILGIA 256

Query: 61  PYLY 65
            YLY
Sbjct: 257 AYLY 260

[Close]

BLAST of Tan0004412 vs. NCBI nr
Match: XP_004144411.1 (syntaxin-71 [Cucumis sativus] >KGN58406.1 hypothetical protein Csa_001271 [Cucumis sativus])

HSP 1 Score: 105.5 bits (262), Expect = 2.0e-19
Identity = 55/64 (85.94%), Postives = 59/64 (92.19%), Query Frame = 0


Query: 1   MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIA 60
           M +EID+QVPLMDEI+TKVDK ASDLKNTN RLKDTVNQLRS+RNFCIDIILL IILGIA
Sbjct: 197 MNEEIDRQVPLMDEIDTKVDKAASDLKNTNVRLKDTVNQLRSSRNFCIDIILLCIILGIA 256

Query: 61  PYLY 65
            YLY
Sbjct: 257 AYLY 260

[Close]

BLAST of Tan0004412 vs. NCBI nr
Match: XP_008442667.1 (PREDICTED: syntaxin-71 [Cucumis melo] >XP_011651951.2 syntaxin-71 [Cucumis sativus] >KAE8651039.1 hypothetical protein Csa_001728 [Cucumis sativus])

HSP 1 Score: 105.5 bits (262), Expect = 2.0e-19
Identity = 55/64 (85.94%), Postives = 59/64 (92.19%), Query Frame = 0


Query: 1   MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIA 60
           M +EID+QVPLMDEI+TKVDK ASDLKNTN RLKDTVNQLRS+RNFCIDIILL IILGIA
Sbjct: 197 MNEEIDRQVPLMDEIDTKVDKAASDLKNTNVRLKDTVNQLRSSRNFCIDIILLCIILGIA 256

Query: 61  PYLY 65
            YLY
Sbjct: 257 AYLY 260

[Close]

BLAST of Tan0004412 vs. NCBI nr
Match: GFZ11422.1 (syntaxin of plants 71 [Actinidia rufa])

HSP 1 Score: 104.8 bits (260), Expect = 3.4e-19
Identity = 54/64 (84.38%), Postives = 58/64 (90.62%), Query Frame = 0


Query: 1   MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIA 60
           M +E+D+QVPLMDEINTKVDK  SDLKNTN RLKDTVNQLRS+RNFCIDIILL IILGIA
Sbjct: 132 MNEEMDRQVPLMDEINTKVDKATSDLKNTNVRLKDTVNQLRSSRNFCIDIILLCIILGIA 191

Query: 61  PYLY 65
            YLY
Sbjct: 192 AYLY 195

[Close]

BLAST of Tan0004412 vs. ExPASy TrEMBL
Match: A0A5A7TS26 (Syntaxin-71 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002460 PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 9.6e-20
Identity = 55/64 (85.94%), Postives = 59/64 (92.19%), Query Frame = 0


Query: 1   MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIA 60
           M +EID+QVPLMDEI+TKVDK ASDLKNTN RLKDTVNQLRS+RNFCIDIILL IILGIA
Sbjct: 197 MNEEIDRQVPLMDEIDTKVDKAASDLKNTNVRLKDTVNQLRSSRNFCIDIILLCIILGIA 256

Query: 61  PYLY 65
            YLY
Sbjct: 257 AYLY 260

[Close]

BLAST of Tan0004412 vs. ExPASy TrEMBL
Match: A0A0A0LE82 (t-SNARE coiled-coil homology domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G638520 PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 9.6e-20
Identity = 55/64 (85.94%), Postives = 59/64 (92.19%), Query Frame = 0


Query: 1   MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIA 60
           M +EID+QVPLMDEI+TKVDK ASDLKNTN RLKDTVNQLRS+RNFCIDIILL IILGIA
Sbjct: 197 MNEEIDRQVPLMDEIDTKVDKAASDLKNTNVRLKDTVNQLRSSRNFCIDIILLCIILGIA 256

Query: 61  PYLY 65
            YLY
Sbjct: 257 AYLY 260

[Close]

BLAST of Tan0004412 vs. ExPASy TrEMBL
Match: A0A1S3B689 (syntaxin-71 OS=Cucumis melo OX=3656 GN=LOC103486468 PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 9.6e-20
Identity = 55/64 (85.94%), Postives = 59/64 (92.19%), Query Frame = 0


Query: 1   MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIA 60
           M +EID+QVPLMDEI+TKVDK ASDLKNTN RLKDTVNQLRS+RNFCIDIILL IILGIA
Sbjct: 197 MNEEIDRQVPLMDEIDTKVDKAASDLKNTNVRLKDTVNQLRSSRNFCIDIILLCIILGIA 256

Query: 61  PYLY 65
            YLY
Sbjct: 257 AYLY 260

[Close]

BLAST of Tan0004412 vs. ExPASy TrEMBL
Match: A0A7J0GKX9 (Syntaxin of plants 71 OS=Actinidia rufa OX=165716 GN=Acr_22g0008200 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.6e-19
Identity = 54/64 (84.38%), Postives = 58/64 (90.62%), Query Frame = 0


Query: 1   MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIA 60
           M +E+D+QVPLMDEINTKVDK  SDLKNTN RLKDTVNQLRS+RNFCIDIILL IILGIA
Sbjct: 132 MNEEMDRQVPLMDEINTKVDKATSDLKNTNVRLKDTVNQLRSSRNFCIDIILLCIILGIA 191

Query: 61  PYLY 65
            YLY
Sbjct: 192 AYLY 195

[Close]

BLAST of Tan0004412 vs. ExPASy TrEMBL
Match: A0A3Q0ELE2 (syntaxin-71 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106780492 PE=3 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.1e-19
Identity = 52/67 (77.61%), Postives = 60/67 (89.55%), Query Frame = 0


Query: 1   MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIA 60
           M +E+D+QVPLMDEI+TKVDK +SDLKNTN RLKDTVNQLRS+RNFCIDI+LL IILGIA
Sbjct: 197 MNEELDRQVPLMDEIDTKVDKASSDLKNTNVRLKDTVNQLRSSRNFCIDIVLLIIILGIA 256

Query: 61  PYLYTSK 68
            YLY  +
Sbjct: 257 AYLYNCR 263

[Close]

BLAST of Tan0004412 vs. TAIR 10
Match: AT3G09740.1 (syntaxin of plants 71 )

HSP 1 Score: 101.3 bits (251), Expect = 3.5e-22
Identity = 50/64 (78.12%), Postives = 58/64 (90.62%), Query Frame = 0


Query: 1   MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIA 60
           M +E+D+QVPLMDEI+TKVD+  SDLKNTN RLKDTVNQLRS+RNFCIDI+LL I+LGIA
Sbjct: 199 MNEELDRQVPLMDEIDTKVDRATSDLKNTNVRLKDTVNQLRSSRNFCIDIVLLCIVLGIA 258

Query: 61  PYLY 65
            YLY
Sbjct: 259 AYLY 262

[Close]

BLAST of Tan0004412 vs. TAIR 10
Match: AT3G61450.1 (syntaxin of plants 73 )

HSP 1 Score: 92.4 bits (228), Expect = 1.6e-19
Identity = 45/66 (68.18%), Postives = 58/66 (87.88%), Query Frame = 0


Query: 1   MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIA 60
           + +E+D+Q PLMDEI+TK+DK A+DLK+TN RLKDTV +LRS+RNFCIDIILL I+LGIA
Sbjct: 196 INEELDRQEPLMDEIDTKIDKAATDLKSTNVRLKDTVTKLRSSRNFCIDIILLCILLGIA 255

Query: 61  PYLYTS 67
            ++Y S
Sbjct: 256 AFIYNS 261

[Close]

BLAST of Tan0004412 vs. TAIR 10
Match: AT3G61450.2 (syntaxin of plants 73 )

HSP 1 Score: 92.4 bits (228), Expect = 1.6e-19
Identity = 45/66 (68.18%), Postives = 58/66 (87.88%), Query Frame = 0


Query: 1   MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIA 60
           + +E+D+Q PLMDEI+TK+DK A+DLK+TN RLKDTV +LRS+RNFCIDIILL I+LGIA
Sbjct: 197 INEELDRQEPLMDEIDTKIDKAATDLKSTNVRLKDTVTKLRSSRNFCIDIILLCILLGIA 256

Query: 61  PYLYTS 67
            ++Y S
Sbjct: 257 AFIYNS 262

[Close]

BLAST of Tan0004412 vs. TAIR 10
Match: AT3G45280.1 (syntaxin of plants 72 )

HSP 1 Score: 86.3 bits (212), Expect = 1.2e-17
Identity = 43/66 (65.15%), Postives = 53/66 (80.30%), Query Frame = 0


Query: 1   MKQEIDKQVPLMDEINTKVDKVASDLKNTNARLKDTVNQLRSNRNFCIDIILLRIILGIA 60
           M +E+DKQVPLM+E+ TKVD   SDLKNTN RLK  + Q+RS+RNFCIDIILL +ILGI 
Sbjct: 200 MNEELDKQVPLMEEMETKVDGATSDLKNTNVRLKKQLVQMRSSRNFCIDIILLCVILGIV 259

Query: 61  PYLYTS 67
            Y+Y +
Sbjct: 260 SYIYNA 265

The following BLAST results are available for this feature:

BLAST of Tan0004412 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SF29	4.9e-21	78.13	Syntaxin-71 OS=Arabidopsis thaliana OX=3702 GN=SYP71 PE=1 SV=1	[more]
Q94KK5	2.3e-18	68.18	Syntaxin-73 OS=Arabidopsis thaliana OX=3702 GN=SYP73 PE=2 SV=1	[more]
Q94KK6	1.6e-16	65.15	Syntaxin-72 OS=Arabidopsis thaliana OX=3702 GN=SYP72 PE=2 SV=1	[more]

BLAST of Tan0004412 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904060.1	2.0e-19	85.94	syntaxin-71 [Benincasa hispida]	[more]
KAA0044019.1	2.0e-19	85.94	syntaxin-71 [Cucumis melo var. makuwa] >TYK25121.1 syntaxin-71 [Cucumis melo var...	[more]
XP_004144411.1	2.0e-19	85.94	syntaxin-71 [Cucumis sativus] >KGN58406.1 hypothetical protein Csa_001271 [Cucum...	[more]
XP_008442667.1	2.0e-19	85.94	PREDICTED: syntaxin-71 [Cucumis melo] >XP_011651951.2 syntaxin-71 [Cucumis sativ...	[more]
GFZ11422.1	3.4e-19	84.38	syntaxin of plants 71 [Actinidia rufa]	[more]

BLAST of Tan0004412 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TS26	9.6e-20	85.94	Syntaxin-71 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002460 P...	[more]
A0A0A0LE82	9.6e-20	85.94	t-SNARE coiled-coil homology domain-containing protein OS=Cucumis sativus OX=365...	[more]
A0A1S3B689	9.6e-20	85.94	syntaxin-71 OS=Cucumis melo OX=3656 GN=LOC103486468 PE=3 SV=1	[more]
A0A7J0GKX9	1.6e-19	84.38	Syntaxin of plants 71 OS=Actinidia rufa OX=165716 GN=Acr_22g0008200 PE=4 SV=1	[more]
A0A3Q0ELE2	2.1e-19	77.61	syntaxin-71 isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106780492 PE=...	[more]

BLAST of Tan0004412 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09740.1	3.5e-22	78.13	syntaxin of plants 71	[more]
AT3G61450.1	1.6e-19	68.18	syntaxin of plants 73	[more]
AT3G61450.2	1.6e-19	68.18	syntaxin of plants 73	[more]
AT3G45280.1	1.2e-17	65.15	syntaxin of plants 72	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 12..43
None	No IPR available	GENE3D	1.20.5.110		coord: 1..45 e-value: 1.4E-7 score: 33.4
None	No IPR available	PANTHER	PTHR19957	SYNTAXIN	coord: 1..65
None	No IPR available	PANTHER	PTHR19957:SF264	SYNTAXIN-73	coord: 1..65
None	No IPR available	CDD	cd15841	SNARE_Qc	coord: 1..34 e-value: 1.58138E-5 score: 36.3824
None	No IPR available	SUPERFAMILY	58038	SNARE fusion complex	coord: 1..34
IPR000727	Target SNARE coiled-coil homology domain	PFAM	PF05739	SNARE	coord: 11..59 e-value: 3.4E-10 score: 39.8
IPR000727	Target SNARE coiled-coil homology domain	PROSITE	PS50192	T_SNARE	coord: 1..36 score: 10.16977

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0004412.1	Tan0004412.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0048278	vesicle docking
biological_process	GO:0006906	vesicle fusion
cellular_component	GO:0012505	endomembrane system
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031201	SNARE complex
molecular_function	GO:0005484	SNAP receptor activity
molecular_function	GO:0000149	SNARE binding