Tan0004247 (gene) Snake gourd v1

Overview


Name	Tan0004247
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	RING-H2 finger protein ATL80-like
Location	LG01: 116655370 .. 116656675 (+)
RNA-Seq Expression	Tan0004247
Synteny	Tan0004247

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAACGAAAGCCGATTCCCGTGTCCAGTATAAAACCCCCCAAAATCCCCTCGAAACGACAGACGTTACGGCCACGGTTGATGCAAAAAGACTGCTCTTCTCAGTTCTTATCTTATACGTTATACCCCCTACCCTTGTCTCGCCGCTTCAGATGCGTCCCTTTAGGTACCTCGCCGGTGTGAACTCCTCCGCCATCTCCGACACGGTGGAGCCCGATAGGTATGATTCCGATTTCGTCATAATCCTCGCCGCTCTTCTCTGCGCCTTGATATGCGTTCTCGGTCTCGTTGCTGTTGCCCGATGCGCCTGGCTACGCCACCTCGCCGGCGATAATGGTGGCTCTGCTTCCACTCGTCCTCCTCCGCCTCCTGTCTCCAACAAAGGTCTCAAGAAGAAGATCCTGAGGTCTCTTCCGAAGTACACCTTCACTGCCGAGTTTGCTGCTCAGTTCTCAGATTGCGCGATCTGCCTCGCGGAGTTCGCTGTCGGTGATGAAATTCGCGTGCTGCCTCAGTGCGGCCATGGATTTCACGTGTCCTGCATCGACACATGGTTCCGATCTCACTCCTCCTGTCCTTCGTGCCGTCAGATTCTTGTGGTAAGTCAGTGCCAAAAGTGCGGCGGTTTTCCGGCGAGCTCGAGTTCGAGCGGTGGGACCGAATCCAGAGTAAAAGAGGAAGGAGAAGATAAGACGAATAGGTTCTTACCTTAGCCCTAAGTTTTTCGTTGTTCCTTCCTTCCTTCCTTCGTCCGTGTTGTAAATAACTTTCTTAATCAAAATTCATGTAATTAGTATAAATTGTGGATGTATTCAAGTTGTAAGCGAAGGCGATTTTCCCTGAATTTGAAATCGGCCGCTCCGGTAAGTTGTGTTGTGAAAATTGACTTAAAATCAATCTGTAAGTCGATTTTCAGGCTGGGAATGTAACGGAGATGGCATAACTTTAAGAGTAGTACAGGCGATGAAATCAAAAGGGGGAACAGTATCAGTATCATGTGGATGGATGGTGGACATTGTTTTATGTCGACAACAGCCAATGTGATGATTTGTTTATTTGCATCTTTGGATCGCATTTTTCGGCTTCCTCTGCATCTCTCTTCACAATGCCAATTTTTCTCTTTCCTCTGCCAGGAAAAATATTACATGTGAAAAGTTTTGAAAATGGAATAATTCTGCAACTGCAAATGCAACTGCTCCGTTTCTGATTAAAAAAATTGTAAATCAAGAATCCATTTTTTTACCTTCCATTGCCATGCCTGCTGCATTCTGCCCTTTTCGCTTTCAGTTCTCTTCTCACCA

mRNA sequence

AAAAAAAAAAACGAAAGCCGATTCCCGTGTCCAGTATAAAACCCCCCAAAATCCCCTCGAAACGACAGACGTTACGGCCACGGTTGATGCAAAAAGACTGCTCTTCTCAGTTCTTATCTTATACGTTATACCCCCTACCCTTGTCTCGCCGCTTCAGATGCGTCCCTTTAGGTACCTCGCCGGTGTGAACTCCTCCGCCATCTCCGACACGGTGGAGCCCGATAGGTATGATTCCGATTTCGTCATAATCCTCGCCGCTCTTCTCTGCGCCTTGATATGCGTTCTCGGTCTCGTTGCTGTTGCCCGATGCGCCTGGCTACGCCACCTCGCCGGCGATAATGGTGGCTCTGCTTCCACTCGTCCTCCTCCGCCTCCTGTCTCCAACAAAGGTCTCAAGAAGAAGATCCTGAGGTCTCTTCCGAAGTACACCTTCACTGCCGAGTTTGCTGCTCAGTTCTCAGATTGCGCGATCTGCCTCGCGGAGTTCGCTGTCGGTGATGAAATTCGCGTGCTGCCTCAGTGCGGCCATGGATTTCACGTGTCCTGCATCGACACATGGTTCCGATCTCACTCCTCCTGTCCTTCGTGCCGTCAGATTCTTGTGGTAAGTCAGTGCCAAAAGTGCGGCGGTTTTCCGGCGAGCTCGAGTTCGAGCGGTGGGACCGAATCCAGAGTAAAAGAGGAAGGAGAAGATAAGACGAATAGGTTCTTACCTTAGCCCTAAGTTTTTCGTTGTTCCTTCCTTCCTTCCTTCGTCCGTGTTGTAAATAACTTTCTTAATCAAAATTCATGTAATTAGTATAAATTGTGGATGTATTCAAGTTGTAAGCGAAGGCGATTTTCCCTGAATTTGAAATCGGCCGCTCCGGTAAGTTGTGTTGTGAAAATTGACTTAAAATCAATCTGTAAGTCGATTTTCAGGCTGGGAATGTAACGGAGATGGCATAACTTTAAGAGTAGTACAGGCGATGAAATCAAAAGGGGGAACAGTATCAGTATCATGTGGATGGATGGTGGACATTGTTTTATGTCGACAACAGCCAATGTGATGATTTGTTTATTTGCATCTTTGGATCGCATTTTTCGGCTTCCTCTGCATCTCTCTTCACAATGCCAATTTTTCTCTTTCCTCTGCCAGGAAAAATATTACATGTGAAAAGTTTTGAAAATGGAATAATTCTGCAACTGCAAATGCAACTGCTCCGTTTCTGATTAAAAAAATTGTAAATCAAGAATCCATTTTTTTACCTTCCATTGCCATGCCTGCTGCATTCTGCCCTTTTCGCTTTCAGTTCTCTTCTCACCA

Coding sequence (CDS)

ATGCGTCCCTTTAGGTACCTCGCCGGTGTGAACTCCTCCGCCATCTCCGACACGGTGGAGCCCGATAGGTATGATTCCGATTTCGTCATAATCCTCGCCGCTCTTCTCTGCGCCTTGATATGCGTTCTCGGTCTCGTTGCTGTTGCCCGATGCGCCTGGCTACGCCACCTCGCCGGCGATAATGGTGGCTCTGCTTCCACTCGTCCTCCTCCGCCTCCTGTCTCCAACAAAGGTCTCAAGAAGAAGATCCTGAGGTCTCTTCCGAAGTACACCTTCACTGCCGAGTTTGCTGCTCAGTTCTCAGATTGCGCGATCTGCCTCGCGGAGTTCGCTGTCGGTGATGAAATTCGCGTGCTGCCTCAGTGCGGCCATGGATTTCACGTGTCCTGCATCGACACATGGTTCCGATCTCACTCCTCCTGTCCTTCGTGCCGTCAGATTCTTGTGGTAAGTCAGTGCCAAAAGTGCGGCGGTTTTCCGGCGAGCTCGAGTTCGAGCGGTGGGACCGAATCCAGAGTAAAAGAGGAAGGAGAAGATAAGACGAATAGGTTCTTACCTTAG

Protein sequence

MRPFRYLAGVNSSAISDTVEPDRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDNGGSASTRPPPPPVSNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSSGGTESRVKEEGEDKTNRFLP

Homology

[Close]

BLAST of Tan0004247 vs. ExPASy Swiss-Prot
Match: Q9LM69 (RING-H2 finger protein ATL80 OS=Arabidopsis thaliana OX=3702 GN=ATL80 PE=2 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.0e-55
Identity = 113/192 (58.85%), Postives = 140/192 (72.92%), Query Frame = 0


Query: 4   FRYLAGVNSSAISDTVEPDRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDNG- 63
           FR L   N+ + +        +SD V+ILAALLCALICVLGL+AV+RC WLR LA  N  
Sbjct: 6   FRLLVESNTPSPAIDNSTAALNSDLVVILAALLCALICVLGLIAVSRCVWLRRLAAGNRT 65

Query: 64  -GSASTRPPPPPV--SNKGLKKKILRSLPKYTFTAEF--AAQFSDCAICLAEFAVGDEIR 123
              + T+ P PPV  +NKGLKKK+L+SLPK TF+ E   + +F++CAICLAEF+ GDE+R
Sbjct: 66  VSGSQTQSPQPPVAAANKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELR 125

Query: 124 VLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSSGGTESRVK--- 183
           VLPQCGHGFHV+CIDTW  SHSSCPSCRQILVV++C KCGG P SSSS   +E  ++   
Sbjct: 126 VLPQCGHGFHVACIDTWLGSHSSCPSCRQILVVARCHKCGGLPGSSSSGLESEPEIEIRI 185

Query: 184 EEGEDKTNRFLP 187
           ++GED  N FLP
Sbjct: 186 KQGEDDPNSFLP 197

[Close]

BLAST of Tan0004247 vs. ExPASy Swiss-Prot
Match: Q8LC69 (RING-H2 finger protein ATL8 OS=Arabidopsis thaliana OX=3702 GN=ATL8 PE=2 SV=2)

HSP 1 Score: 213.0 bits (541), Expect = 2.9e-54
Identity = 108/180 (60.00%), Postives = 134/180 (74.44%), Query Frame = 0


Query: 4   FRYLAGVNSSAISDTVEPDRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDNGG 63
           FR L   NS++ ++   P  ++SD V+ILA LLCAL C++GL+AV+RCAWLR +A  N  
Sbjct: 6   FRLLQEANSTSPAEASPP--FNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASRN-R 65

Query: 64  SASTRPPPPPVSNKGLKKKILRSLPKYTFTAEF--AAQFSDCAICLAEFAVGDEIRVLPQ 123
           S  T PPP   +NKGLKKK+LRSLPK T++ +   A +  +CAICL EFA GDE+RVLPQ
Sbjct: 66  SDQTHPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQ 125

Query: 124 CGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSSGGTESRVK--EEGED 180
           CGHGFHVSCIDTW  SHSSCPSCRQILVV++C KCGG P SSSS    ++R+K  E+G D
Sbjct: 126 CGHGFHVSCIDTWLGSHSSCPSCRQILVVTRCHKCGGLPGSSSSGPEPDTRIKQREDGPD 182

[Close]

BLAST of Tan0004247 vs. ExPASy Swiss-Prot
Match: Q9ZT49 (Probable E3 ubiquitin-protein ligase ATL45 OS=Arabidopsis thaliana OX=3702 GN=ATL45 PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.4e-37
Identity = 81/168 (48.21%), Postives = 108/168 (64.29%), Query Frame = 0


Query: 25  DSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDNGGSASTRPPPPPVSNKGLKKKIL 84
           ++D V+IL+ALLCAL+CV GL AVARCAWLR L G N  +    PPP    NKGLKKK L
Sbjct: 23  ETDMVVILSALLCALVCVAGLAAVARCAWLRRLTGVNPAAVGEAPPP----NKGLKKKAL 82

Query: 85  RSLPKYTFTAEFAA----------------QFSDCAICLAEFAVGDEIRVLPQCGHGFHV 144
           ++LPK T+TA  +                   ++CAIC+ EF+ G+EIR+LP C H FHV
Sbjct: 83  QALPKSTYTASASTAAAADDLPCSSVGDGDSSTECAICITEFSEGEEIRILPLCSHAFHV 142

Query: 145 SCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSSGGTESRVKEE 177
           +CID W  S SSCPSCR+ILV  +C +CG   +++      E++VK++
Sbjct: 143 ACIDKWLTSRSSCPSCRRILVPVKCDRCGHHASTA------ETQVKDQ 180

[Close]

BLAST of Tan0004247 vs. ExPASy Swiss-Prot
Match: O22755 (Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=ATL44 PE=1 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.3e-35
Identity = 82/141 (58.16%), Postives = 94/141 (66.67%), Query Frame = 0


Query: 25  DSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDNGGSASTRPPPPPVSNKGLKKKIL 84
           +SD V+IL+ALLCALICV GL AV RCAWLR      GG +       P  NKGLKKK L
Sbjct: 25  ESDMVVILSALLCALICVAGLAAVVRCAWLRRFTA--GGDS-------PSPNKGLKKKAL 84

Query: 85  RSLPKYTFTAE-----FAAQFSD---CAICLAEFAVGDEIRVLPQCGHGFHVSCIDTWFR 144
           +SLP+ TFTA       AA+  D   CAICL +FA G+EIRVLP CGH FHV CID W  
Sbjct: 85  QSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLV 144

Query: 145 SHSSCPSCRQILVVSQCQKCG 158
           S SSCPSCR+IL   +C +CG
Sbjct: 145 SRSSCPSCRRILTPVRCDRCG 156

[Close]

BLAST of Tan0004247 vs. ExPASy Swiss-Prot
Match: Q9FLC6 (RING-H2 finger protein ATL73 OS=Arabidopsis thaliana OX=3702 GN=ATL73 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 9.6e-26
Identity = 70/166 (42.17%), Postives = 95/166 (57.23%), Query Frame = 0


Query: 11  NSSAISDTVEPDR----YDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDNGGSAS 70
           N   + D+V  ++     D+  VIILAALLCALIC LG+ +V RC  LR        +  
Sbjct: 20  NPRTLGDSVSNNKNIASMDTHMVIILAALLCALICALGINSVLRCV-LR-------CTRR 79

Query: 71  TRPPPPPVSN-----KGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFAVGDEIRVLPQ 130
             P   PV       KG+KK+ L+ +P  +++ E   + ++C ICL +F  G+ +RVLP+
Sbjct: 80  FTPNEDPVDTNANVAKGIKKRALKVIPVDSYSPELKMKATECLICLGDFVEGETVRVLPK 139

Query: 131 CGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSSG 168
           C HGFHV CIDTW  SHSSCP+CRQ L+  Q       PA+ S  G
Sbjct: 140 CNHGFHVKCIDTWLLSHSSCPTCRQSLLEHQT------PANGSRRG 171

[Close]

BLAST of Tan0004247 vs. NCBI nr
Match: XP_023523429.1 (RING-H2 finger protein ATL8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 362.8 bits (930), Expect = 1.7e-96
Identity = 175/186 (94.09%), Postives = 180/186 (96.77%), Query Frame = 0


Query: 1   MRPFRYLAGVNSSAISDTVEPDRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60
           MRPFRYLA  NSS+ISDTVEP+RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD
Sbjct: 1   MRPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60

Query: 61  NGGSASTRPPPPPVSNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFAVGDEIRVLP 120
            GG+ASTRPPPPP SNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEF VGDEIRVLP
Sbjct: 61  RGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFVVGDEIRVLP 120

Query: 121 QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSSGGTESRVKEEGEDK 180
           QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSS+GGTESRVK+EGEDK
Sbjct: 121 QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKDEGEDK 180

Query: 181 TNRFLP 187
            NRFLP
Sbjct: 181 RNRFLP 186

[Close]

BLAST of Tan0004247 vs. NCBI nr
Match: KAG6608649.1 (RING-H2 finger protein ATL80, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037966.1 RING-H2 finger protein ATL80, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 360.1 bits (923), Expect = 1.1e-95
Identity = 174/186 (93.55%), Postives = 179/186 (96.24%), Query Frame = 0


Query: 1   MRPFRYLAGVNSSAISDTVEPDRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60
           MRPFRYLA  NSS+ISDTVEP+RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD
Sbjct: 1   MRPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60

Query: 61  NGGSASTRPPPPPVSNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFAVGDEIRVLP 120
            GG+ASTRPPPPP SNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEF VGDEIRVLP
Sbjct: 61  GGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFVVGDEIRVLP 120

Query: 121 QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSSGGTESRVKEEGEDK 180
           QCGHGFHVSCIDTWFRSHSSCPSCRQILV SQCQKCGGFPASSSS+GGTESRVK+EGEDK
Sbjct: 121 QCGHGFHVSCIDTWFRSHSSCPSCRQILVGSQCQKCGGFPASSSSNGGTESRVKDEGEDK 180

Query: 181 TNRFLP 187
            NRFLP
Sbjct: 181 RNRFLP 186

[Close]

BLAST of Tan0004247 vs. NCBI nr
Match: XP_022941514.1 (RING-H2 finger protein ATL80-like [Cucurbita moschata])

HSP 1 Score: 359.8 bits (922), Expect = 1.5e-95
Identity = 174/186 (93.55%), Postives = 179/186 (96.24%), Query Frame = 0


Query: 1   MRPFRYLAGVNSSAISDTVEPDRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60
           MR FRYLA  NSS+ISDTVEP+RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD
Sbjct: 1   MRSFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60

Query: 61  NGGSASTRPPPPPVSNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFAVGDEIRVLP 120
            GG+ASTRPPPPP SNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEF VGDEIRVLP
Sbjct: 61  GGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFVVGDEIRVLP 120

Query: 121 QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSSGGTESRVKEEGEDK 180
           QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSS+GGTESRVK+EGEDK
Sbjct: 121 QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKDEGEDK 180

Query: 181 TNRFLP 187
            NRFLP
Sbjct: 181 RNRFLP 186

[Close]

BLAST of Tan0004247 vs. NCBI nr
Match: XP_004145558.1 (RING-H2 finger protein ATL8 [Cucumis sativus] >KGN55526.1 hypothetical protein Csa_012171 [Cucumis sativus])

HSP 1 Score: 358.6 bits (919), Expect = 3.2e-95
Identity = 175/186 (94.09%), Postives = 180/186 (96.77%), Query Frame = 0


Query: 1   MRPFRYLAGVNSSAISDTVEPDRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60
           MRPFRYLAGVNSSA SDT EP RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD
Sbjct: 1   MRPFRYLAGVNSSATSDTFEP-RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60

Query: 61  NGGSASTRPPPPPVSNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFAVGDEIRVLP 120
            GG+ STRPPPPP SNKGLKKKILRSLPKYTFTAEF+AQFSDCAICLAEFAVGDEIRVLP
Sbjct: 61  GGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFSDCAICLAEFAVGDEIRVLP 120

Query: 121 QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSSGGTESRVKEEGEDK 180
           QCGHGFH+SCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSS+GGTESRVKEEG+DK
Sbjct: 121 QCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDK 180

Query: 181 TNRFLP 187
           TNRFLP
Sbjct: 181 TNRFLP 185

[Close]

BLAST of Tan0004247 vs. NCBI nr
Match: XP_008453009.1 (PREDICTED: RING-H2 finger protein ATL80 [Cucumis melo] >KAA0064659.1 RING-H2 finger protein ATL80 [Cucumis melo var. makuwa] >TYK19932.1 RING-H2 finger protein ATL80 [Cucumis melo var. makuwa])

HSP 1 Score: 357.5 bits (916), Expect = 7.2e-95
Identity = 175/186 (94.09%), Postives = 179/186 (96.24%), Query Frame = 0


Query: 1   MRPFRYLAGVNSSAISDTVEPDRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60
           MRPFRYLAGVNSSA SDT EP RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD
Sbjct: 1   MRPFRYLAGVNSSATSDTFEP-RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60

Query: 61  NGGSASTRPPPPPVSNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFAVGDEIRVLP 120
             G+ STRPPPPP SNKGLKKKILRSLPKYTFTAEF+AQFSDCAICLAEFAVGDEIRVLP
Sbjct: 61  GAGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFSDCAICLAEFAVGDEIRVLP 120

Query: 121 QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSSGGTESRVKEEGEDK 180
           QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSS+GGTESRVKEEG+DK
Sbjct: 121 QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDK 180

Query: 181 TNRFLP 187
           TNRFLP
Sbjct: 181 TNRFLP 185

[Close]

BLAST of Tan0004247 vs. ExPASy TrEMBL
Match: A0A6J1FNK0 (RING-H2 finger protein ATL80-like OS=Cucurbita moschata OX=3662 GN=LOC111446793 PE=4 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 7.0e-96
Identity = 174/186 (93.55%), Postives = 179/186 (96.24%), Query Frame = 0


Query: 1   MRPFRYLAGVNSSAISDTVEPDRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60
           MR FRYLA  NSS+ISDTVEP+RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD
Sbjct: 1   MRSFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60

Query: 61  NGGSASTRPPPPPVSNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFAVGDEIRVLP 120
            GG+ASTRPPPPP SNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEF VGDEIRVLP
Sbjct: 61  GGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFVVGDEIRVLP 120

Query: 121 QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSSGGTESRVKEEGEDK 180
           QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSS+GGTESRVK+EGEDK
Sbjct: 121 QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKDEGEDK 180

Query: 181 TNRFLP 187
            NRFLP
Sbjct: 181 RNRFLP 186

[Close]

BLAST of Tan0004247 vs. ExPASy TrEMBL
Match: A0A0A0L5Y2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G664340 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 1.6e-95
Identity = 175/186 (94.09%), Postives = 180/186 (96.77%), Query Frame = 0


Query: 1   MRPFRYLAGVNSSAISDTVEPDRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60
           MRPFRYLAGVNSSA SDT EP RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD
Sbjct: 1   MRPFRYLAGVNSSATSDTFEP-RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60

Query: 61  NGGSASTRPPPPPVSNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFAVGDEIRVLP 120
            GG+ STRPPPPP SNKGLKKKILRSLPKYTFTAEF+AQFSDCAICLAEFAVGDEIRVLP
Sbjct: 61  GGGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFSDCAICLAEFAVGDEIRVLP 120

Query: 121 QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSSGGTESRVKEEGEDK 180
           QCGHGFH+SCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSS+GGTESRVKEEG+DK
Sbjct: 121 QCGHGFHMSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDK 180

Query: 181 TNRFLP 187
           TNRFLP
Sbjct: 181 TNRFLP 185

[Close]

BLAST of Tan0004247 vs. ExPASy TrEMBL
Match: A0A5A7VGL3 (RING-H2 finger protein ATL80 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G00440 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 3.5e-95
Identity = 175/186 (94.09%), Postives = 179/186 (96.24%), Query Frame = 0


Query: 1   MRPFRYLAGVNSSAISDTVEPDRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60
           MRPFRYLAGVNSSA SDT EP RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD
Sbjct: 1   MRPFRYLAGVNSSATSDTFEP-RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60

Query: 61  NGGSASTRPPPPPVSNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFAVGDEIRVLP 120
             G+ STRPPPPP SNKGLKKKILRSLPKYTFTAEF+AQFSDCAICLAEFAVGDEIRVLP
Sbjct: 61  GAGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFSDCAICLAEFAVGDEIRVLP 120

Query: 121 QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSSGGTESRVKEEGEDK 180
           QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSS+GGTESRVKEEG+DK
Sbjct: 121 QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDK 180

Query: 181 TNRFLP 187
           TNRFLP
Sbjct: 181 TNRFLP 185

[Close]

BLAST of Tan0004247 vs. ExPASy TrEMBL
Match: A0A1S3BWC1 (RING-H2 finger protein ATL80 OS=Cucumis melo OX=3656 GN=LOC103493842 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 3.5e-95
Identity = 175/186 (94.09%), Postives = 179/186 (96.24%), Query Frame = 0


Query: 1   MRPFRYLAGVNSSAISDTVEPDRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60
           MRPFRYLAGVNSSA SDT EP RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD
Sbjct: 1   MRPFRYLAGVNSSATSDTFEP-RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60

Query: 61  NGGSASTRPPPPPVSNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFAVGDEIRVLP 120
             G+ STRPPPPP SNKGLKKKILRSLPKYTFTAEF+AQFSDCAICLAEFAVGDEIRVLP
Sbjct: 61  GAGAGSTRPPPPPASNKGLKKKILRSLPKYTFTAEFSAQFSDCAICLAEFAVGDEIRVLP 120

Query: 121 QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSSGGTESRVKEEGEDK 180
           QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSS+GGTESRVKEEG+DK
Sbjct: 121 QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDK 180

Query: 181 TNRFLP 187
           TNRFLP
Sbjct: 181 TNRFLP 185

[Close]

BLAST of Tan0004247 vs. ExPASy TrEMBL
Match: A0A6J1IVW2 (RING-H2 finger protein ATL80 OS=Cucurbita maxima OX=3661 GN=LOC111481072 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 7.8e-95
Identity = 174/186 (93.55%), Postives = 179/186 (96.24%), Query Frame = 0


Query: 1   MRPFRYLAGVNSSAISDTVEPDRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60
           MRPFRYLA  NSS+ISDTVEP+RYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD
Sbjct: 1   MRPFRYLADANSSSISDTVEPERYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGD 60

Query: 61  NGGSASTRPPPPPVSNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFAVGDEIRVLP 120
            GG+ASTRPPPPP SNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEF VGDEIRVLP
Sbjct: 61  GGGAASTRPPPPPASNKGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFVVGDEIRVLP 120

Query: 121 QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSSGGTESRVKEEGEDK 180
           QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSS+GGTESRVK +GEDK
Sbjct: 121 QCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVK-DGEDK 180

Query: 181 TNRFLP 187
            NRFLP
Sbjct: 181 RNRFLP 185

[Close]

BLAST of Tan0004247 vs. TAIR 10
Match: AT1G20823.1 (RING/U-box superfamily protein )

HSP 1 Score: 216.9 bits (551), Expect = 1.4e-56
Identity = 113/192 (58.85%), Postives = 140/192 (72.92%), Query Frame = 0


Query: 4   FRYLAGVNSSAISDTVEPDRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDNG- 63
           FR L   N+ + +        +SD V+ILAALLCALICVLGL+AV+RC WLR LA  N  
Sbjct: 6   FRLLVESNTPSPAIDNSTAALNSDLVVILAALLCALICVLGLIAVSRCVWLRRLAAGNRT 65

Query: 64  -GSASTRPPPPPV--SNKGLKKKILRSLPKYTFTAEF--AAQFSDCAICLAEFAVGDEIR 123
              + T+ P PPV  +NKGLKKK+L+SLPK TF+ E   + +F++CAICLAEF+ GDE+R
Sbjct: 66  VSGSQTQSPQPPVAAANKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELR 125

Query: 124 VLPQCGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSSGGTESRVK--- 183
           VLPQCGHGFHV+CIDTW  SHSSCPSCRQILVV++C KCGG P SSSS   +E  ++   
Sbjct: 126 VLPQCGHGFHVACIDTWLGSHSSCPSCRQILVVARCHKCGGLPGSSSSGLESEPEIEIRI 185

Query: 184 EEGEDKTNRFLP 187
           ++GED  N FLP
Sbjct: 186 KQGEDDPNSFLP 197

[Close]

BLAST of Tan0004247 vs. TAIR 10
Match: AT1G76410.1 (RING/U-box superfamily protein )

HSP 1 Score: 213.0 bits (541), Expect = 2.0e-55
Identity = 108/180 (60.00%), Postives = 134/180 (74.44%), Query Frame = 0


Query: 4   FRYLAGVNSSAISDTVEPDRYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDNGG 63
           FR L   NS++ ++   P  ++SD V+ILA LLCAL C++GL+AV+RCAWLR +A  N  
Sbjct: 6   FRLLQEANSTSPAEASPP--FNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASRN-R 65

Query: 64  SASTRPPPPPVSNKGLKKKILRSLPKYTFTAEF--AAQFSDCAICLAEFAVGDEIRVLPQ 123
           S  T PPP   +NKGLKKK+LRSLPK T++ +   A +  +CAICL EFA GDE+RVLPQ
Sbjct: 66  SDQTHPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQ 125

Query: 124 CGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSSGGTESRVK--EEGED 180
           CGHGFHVSCIDTW  SHSSCPSCRQILVV++C KCGG P SSSS    ++R+K  E+G D
Sbjct: 126 CGHGFHVSCIDTWLGSHSSCPSCRQILVVTRCHKCGGLPGSSSSGPEPDTRIKQREDGPD 182

[Close]

BLAST of Tan0004247 vs. TAIR 10
Match: AT4G35480.1 (RING-H2 finger A3B )

HSP 1 Score: 157.5 bits (397), Expect = 1.0e-38
Identity = 81/168 (48.21%), Postives = 108/168 (64.29%), Query Frame = 0


Query: 25  DSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDNGGSASTRPPPPPVSNKGLKKKIL 84
           ++D V+IL+ALLCAL+CV GL AVARCAWLR L G N  +    PPP    NKGLKKK L
Sbjct: 23  ETDMVVILSALLCALVCVAGLAAVARCAWLRRLTGVNPAAVGEAPPP----NKGLKKKAL 82

Query: 85  RSLPKYTFTAEFAA----------------QFSDCAICLAEFAVGDEIRVLPQCGHGFHV 144
           ++LPK T+TA  +                   ++CAIC+ EF+ G+EIR+LP C H FHV
Sbjct: 83  QALPKSTYTASASTAAAADDLPCSSVGDGDSSTECAICITEFSEGEEIRILPLCSHAFHV 142

Query: 145 SCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSSGGTESRVKEE 177
           +CID W  S SSCPSCR+ILV  +C +CG   +++      E++VK++
Sbjct: 143 ACIDKWLTSRSSCPSCRRILVPVKCDRCGHHASTA------ETQVKDQ 180

[Close]

BLAST of Tan0004247 vs. TAIR 10
Match: AT2G17450.1 (RING-H2 finger A3A )

HSP 1 Score: 150.2 bits (378), Expect = 1.6e-36
Identity = 82/141 (58.16%), Postives = 94/141 (66.67%), Query Frame = 0


Query: 25  DSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDNGGSASTRPPPPPVSNKGLKKKIL 84
           +SD V+IL+ALLCALICV GL AV RCAWLR      GG +       P  NKGLKKK L
Sbjct: 25  ESDMVVILSALLCALICVAGLAAVVRCAWLRRFTA--GGDS-------PSPNKGLKKKAL 84

Query: 85  RSLPKYTFTAE-----FAAQFSD---CAICLAEFAVGDEIRVLPQCGHGFHVSCIDTWFR 144
           +SLP+ TFTA       AA+  D   CAICL +FA G+EIRVLP CGH FHV CID W  
Sbjct: 85  QSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLV 144

Query: 145 SHSSCPSCRQILVVSQCQKCG 158
           S SSCPSCR+IL   +C +CG
Sbjct: 145 SRSSCPSCRRILTPVRCDRCG 156

[Close]

BLAST of Tan0004247 vs. TAIR 10
Match: AT5G05280.1 (RING/U-box superfamily protein )

HSP 1 Score: 118.2 bits (295), Expect = 6.9e-27
Identity = 70/166 (42.17%), Postives = 95/166 (57.23%), Query Frame = 0


Query: 11  NSSAISDTVEPDR----YDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGDNGGSAS 70
           N   + D+V  ++     D+  VIILAALLCALIC LG+ +V RC  LR        +  
Sbjct: 20  NPRTLGDSVSNNKNIASMDTHMVIILAALLCALICALGINSVLRCV-LR-------CTRR 79

Query: 71  TRPPPPPVSN-----KGLKKKILRSLPKYTFTAEFAAQFSDCAICLAEFAVGDEIRVLPQ 130
             P   PV       KG+KK+ L+ +P  +++ E   + ++C ICL +F  G+ +RVLP+
Sbjct: 80  FTPNEDPVDTNANVAKGIKKRALKVIPVDSYSPELKMKATECLICLGDFVEGETVRVLPK 139

Query: 131 CGHGFHVSCIDTWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSSG 168
           C HGFHV CIDTW  SHSSCP+CRQ L+  Q       PA+ S  G
Sbjct: 140 CNHGFHVKCIDTWLLSHSSCPTCRQSLLEHQT------PANGSRRG 171

The following BLAST results are available for this feature:

BLAST of Tan0004247 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LM69	2.0e-55	58.85	RING-H2 finger protein ATL80 OS=Arabidopsis thaliana OX=3702 GN=ATL80 PE=2 SV=1	[more]
Q8LC69	2.9e-54	60.00	RING-H2 finger protein ATL8 OS=Arabidopsis thaliana OX=3702 GN=ATL8 PE=2 SV=2	[more]
Q9ZT49	1.4e-37	48.21	Probable E3 ubiquitin-protein ligase ATL45 OS=Arabidopsis thaliana OX=3702 GN=AT...	[more]
O22755	2.3e-35	58.16	Probable E3 ubiquitin-protein ligase ATL44 OS=Arabidopsis thaliana OX=3702 GN=AT...	[more]
Q9FLC6	9.6e-26	42.17	RING-H2 finger protein ATL73 OS=Arabidopsis thaliana OX=3702 GN=ATL73 PE=2 SV=1	[more]

BLAST of Tan0004247 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023523429.1	1.7e-96	94.09	RING-H2 finger protein ATL8-like [Cucurbita pepo subsp. pepo]	[more]
KAG6608649.1	1.1e-95	93.55	RING-H2 finger protein ATL80, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_022941514.1	1.5e-95	93.55	RING-H2 finger protein ATL80-like [Cucurbita moschata]	[more]
XP_004145558.1	3.2e-95	94.09	RING-H2 finger protein ATL8 [Cucumis sativus] >KGN55526.1 hypothetical protein C...	[more]
XP_008453009.1	7.2e-95	94.09	PREDICTED: RING-H2 finger protein ATL80 [Cucumis melo] >KAA0064659.1 RING-H2 fin...	[more]

BLAST of Tan0004247 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FNK0	7.0e-96	93.55	RING-H2 finger protein ATL80-like OS=Cucurbita moschata OX=3662 GN=LOC111446793 ...	[more]
A0A0A0L5Y2	1.6e-95	94.09	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G664340 P...	[more]
A0A5A7VGL3	3.5e-95	94.09	RING-H2 finger protein ATL80 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3BWC1	3.5e-95	94.09	RING-H2 finger protein ATL80 OS=Cucumis melo OX=3656 GN=LOC103493842 PE=4 SV=1	[more]
A0A6J1IVW2	7.8e-95	93.55	RING-H2 finger protein ATL80 OS=Cucurbita maxima OX=3661 GN=LOC111481072 PE=4 SV...	[more]

BLAST of Tan0004247 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G20823.1	1.4e-56	58.85	RING/U-box superfamily protein	[more]
AT1G76410.1	2.0e-55	60.00	RING/U-box superfamily protein	[more]
AT4G35480.1	1.0e-38	48.21	RING-H2 finger A3B	[more]
AT2G17450.1	1.6e-36	58.16	RING-H2 finger A3A	[more]
AT5G05280.1	6.9e-27	42.17	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 103..144 e-value: 7.6E-8 score: 42.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 102..145 e-value: 2.1E-14 score: 53.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 103..145 score: 12.489278
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 72..149 e-value: 7.4E-22 score: 78.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..186
None	No IPR available	PANTHER	PTHR45798	RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED	coord: 2..179
None	No IPR available	PANTHER	PTHR45798:SF59	RING-H2 FINGER PROTEIN ATL8	coord: 2..179
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 102..145 e-value: 4.0752E-17 score: 69.2529
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 83..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0004247.1	Tan0004247.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane