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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAATCATGTTAAAAATTCGAGCCACAAAAAGGTGAGAAAGGGGATCTTGAGAGGGGAAAAGTGGGAAAGGGAAAAAACCCAGATTTATGGGAGTGAATTTGGGCTTCACATGATGAAGAAGAGGCAAATGTGGACGAGAGAAGCCCAAAGAAGAAGACAATTCTGA mRNA sequence ATGAATCATGTTAAAAATTCGAGCCACAAAAAGGTGAGAAAGGGGATCTTGAGAGGGGAAAAGTGGGAAAGGGAAAAAACCCAGATTTATGGGAGTGAATTTGGGCTTCACATGATGAAGAAGAGGCAAATGTGGACGAGAGAAGCCCAAAGAAGAAGACAATTCTGA Coding sequence (CDS) ATGAATCATGTTAAAAATTCGAGCCACAAAAAGGTGAGAAAGGGGATCTTGAGAGGGGAAAAGTGGGAAAGGGAAAAAACCCAGATTTATGGGAGTGAATTTGGGCTTCACATGATGAAGAAGAGGCAAATGTGGACGAGAGAAGCCCAAAGAAGAAGACAATTCTGA Protein sequence MNHVKNSSHKKVRKGILRGEKWEREKTQIYGSEFGLHMMKKRQMWTREAQRRRQF
Homology
BLAST of Tan0004220 vs. NCBI nr
Match: KGN55766.1 (hypothetical protein Csa_009776 [Cucumis sativus]) HSP 1 Score: 68.6 bits (166), Expect = 2.0e-08 Identity = 41/57 (71.93%), Postives = 43/57 (75.44%), Query Frame = 0
Query: 1 MNHVKNSSHKKV--RKGILRGEKWEREKTQIYGSEFGLHMMKKRQMWTREAQRRRQF 56
MNHVKN SHKK +KG L+ R KTQI GSE GLHMMKKRQMW REAQRRRQF
Sbjct: 14 MNHVKNWSHKKKVGKKGDLK-----RGKTQINGSESGLHMMKKRQMWMREAQRRRQF 65
BLAST of Tan0004220 vs. ExPASy TrEMBL
Match: A0A0A0L6J1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011680 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 9.6e-09 Identity = 41/57 (71.93%), Postives = 43/57 (75.44%), Query Frame = 0
Query: 1 MNHVKNSSHKKV--RKGILRGEKWEREKTQIYGSEFGLHMMKKRQMWTREAQRRRQF 56
MNHVKN SHKK +KG L+ R KTQI GSE GLHMMKKRQMW REAQRRRQF
Sbjct: 14 MNHVKNWSHKKKVGKKGDLK-----RGKTQINGSESGLHMMKKRQMWMREAQRRRQF 65
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| KGN55766.1 | 2.0e-08 | 71.93 | hypothetical protein Csa_009776 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
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| A0A0A0L6J1 | 9.6e-09 | 71.93 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011680 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
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Relationships
The following mRNA feature(s) are a part of this gene:
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