
Tan0004103 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTAGATCAAGAACAAAGTTAAAGTGTTTGAGCCCAATGACAATAAAAAACAAACTAATGCATATGCCTCTTGAGCCACATAGGAGATTCATCAAACTTCACTTTTTTGCATGAGCACCCTCTTACCGTTTCCTATATAAGGACATCAATGAAGACATTTTAAAGCATCCCTTTTCAATGGCTATTCCTAAAGCTTTGTCACTTAGTTTTCTTCTATTGGTGGGTTTAGGCTTAGCTTCGGCTGCCAGAACCCTTCTCTCTTATGATCCTCCACATCACTCGGATGTAGGATATGGATATGAACGTCCGGTACATGATCCAAAAATGGGGTATGATAATCATGATCGTCATGATGGACCTTATGGTGGTGGTTCCGGCGGAGGATATGGTGGTGGAGCTGGGTCTGCCCTTGGAGGCTCTGGATATGGAAGTGGCGGAGGTGGAGGAGGTGGTTCTGGATATGGAGGTGTAGGAGATCATGGAGTTGGTTATGGCAATGGTGGAGATCGTGGATATGGAGCAGGAGATCTTGGAGGTAGTGGTGTAGGATATGGAGATCAAGGACATGGAAAAGGTTATGGCAGCGACAATGGTAGAGGAAGTGGATATGGAGGAAGAGGAGATCATGGAGTTGGATATGGTAGTGGTGGAGGTGGAGGATATGGAAGTGCTTCTGGAGGAGAGCATGGTGTTGGCTATGGGAGTGGAGGAGGGGGTGGGTCTGGTAGTGGTTACGGTGGTGGAGCTAAAGGATATGGAGGAGGAAACGGTGGCGGTGGTGGAGCAGGTTATGGTGGTGGAGCCAAAGGAAGCGGATATGGGAGTGGTGGTGGCGCCGGAAGTGGCTATGGCAGTGGTGAAGAAGGAGGATATGATGGGGGATATGCACCTTAAATAAATACTCATCTCAAAGCTTGTCTTTCATGATCCGTAAAATGAAAATTCTTACCTAGTATTCAGCGTGTGTTAGCAAAGATAATAAGAATTTGGGTAAGAATGTTATGCTTCTATATGAATTTCAATACTTTTAATGAACATGACTTTTAAACTAGCTATTTCATACCTTTTGGAGTGAAGATGCATGAATTATATTCTCCTTTATAATTTCCTTAAACATATAATCATTATGTGTTTAGTGTTCCAAGTATAACGTTGTTTACATAAAGTAATTTTTTCTTTTTGACAACATACATGAACAATCTATATAAGATAACCAACTTAGGATTGGTTCATGAGACTATTTTCAATCTCATTTCATTTTTTTTTCGAGTTTAATAATATGTGAG TTTTAGATCAAGAACAAAGTTAAAGTGTTTGAGCCCAATGACAATAAAAAACAAACTAATGCATATGCCTCTTGAGCCACATAGGAGATTCATCAAACTTCACTTTTTTGCATGAGCACCCTCTTACCGTTTCCTATATAAGGACATCAATGAAGACATTTTAAAGCATCCCTTTTCAATGGCTATTCCTAAAGCTTTGTCACTTAGTTTTCTTCTATTGGTGGGTTTAGGCTTAGCTTCGGCTGCCAGAACCCTTCTCTCTTATGATCCTCCACATCACTCGGATGTAGGATATGGATATGAACGTCCGGTACATGATCCAAAAATGGGGTATGATAATCATGATCGTCATGATGGACCTTATGGTGGTGGTTCCGGCGGAGGATATGGTGGTGGAGCTGGGTCTGCCCTTGGAGGCTCTGGATATGGAAGTGGCGGAGGTGGAGGAGGTGGTTCTGGATATGGAGGTGTAGGAGATCATGGAGTTGGTTATGGCAATGGTGGAGATCGTGGATATGGAGCAGGAGATCTTGGAGGTAGTGGTGTAGGATATGGAGATCAAGGACATGGAAAAGGTTATGGCAGCGACAATGGTAGAGGAAGTGGATATGGAGGAAGAGGAGATCATGGAGTTGGATATGGTAGTGGTGGAGGTGGAGGATATGGAAGTGCTTCTGGAGGAGAGCATGGTGTTGGCTATGGGAGTGGAGGAGGGGGTGGGTCTGGTAGTGGTTACGGTGGTGGAGCTAAAGGATATGGAGGAGGAAACGGTGGCGGTGGTGGAGCAGGTTATGGTGGTGGAGCCAAAGGAAGCGGATATGGGAGTGGTGGTGGCGCCGGAAGTGGCTATGGCAGTGGTGAAGAAGGAGGATATGATGGGGGATATGCACCTTAAATAAATACTCATCTCAAAGCTTGTCTTTCATGATCCGTAAAATGAAAATTCTTACCTAGTATTCAGCGTGTGTTAGCAAAGATAATAAGAATTTGGGTAAGAATGTTATGCTTCTATATGAATTTCAATACTTTTAATGAACATGACTTTTAAACTAGCTATTTCATACCTTTTGGAGTGAAGATGCATGAATTATATTCTCCTTTATAATTTCCTTAAACATATAATCATTATGTGTTTAGTGTTCCAAGTATAACGTTGTTTACATAAAGTAATTTTTTCTTTTTGACAACATACATGAACAATCTATATAAGATAACCAACTTAGGATTGGTTCATGAGACTATTTTCAATCTCATTTCATTTTTTTTTCGAGTTTAATAATATGTGAG ATGGCTATTCCTAAAGCTTTGTCACTTAGTTTTCTTCTATTGGTGGGTTTAGGCTTAGCTTCGGCTGCCAGAACCCTTCTCTCTTATGATCCTCCACATCACTCGGATGTAGGATATGGATATGAACGTCCGGTACATGATCCAAAAATGGGGTATGATAATCATGATCGTCATGATGGACCTTATGGTGGTGGTTCCGGCGGAGGATATGGTGGTGGAGCTGGGTCTGCCCTTGGAGGCTCTGGATATGGAAGTGGCGGAGGTGGAGGAGGTGGTTCTGGATATGGAGGTGTAGGAGATCATGGAGTTGGTTATGGCAATGGTGGAGATCGTGGATATGGAGCAGGAGATCTTGGAGGTAGTGGTGTAGGATATGGAGATCAAGGACATGGAAAAGGTTATGGCAGCGACAATGGTAGAGGAAGTGGATATGGAGGAAGAGGAGATCATGGAGTTGGATATGGTAGTGGTGGAGGTGGAGGATATGGAAGTGCTTCTGGAGGAGAGCATGGTGTTGGCTATGGGAGTGGAGGAGGGGGTGGGTCTGGTAGTGGTTACGGTGGTGGAGCTAAAGGATATGGAGGAGGAAACGGTGGCGGTGGTGGAGCAGGTTATGGTGGTGGAGCCAAAGGAAGCGGATATGGGAGTGGTGGTGGCGCCGGAAGTGGCTATGGCAGTGGTGAAGAAGGAGGATATGATGGGGGATATGCACCTTAA MAIPKALSLSFLLLVGLGLASAARTLLSYDPPHHSDVGYGYERPVHDPKMGYDNHDRHDGPYGGGSGGGYGGGAGSALGGSGYGSGGGGGGGSGYGGVGDHGVGYGNGGDRGYGAGDLGGSGVGYGDQGHGKGYGSDNGRGSGYGGRGDHGVGYGSGGGGGYGSASGGEHGVGYGSGGGGGSGSGYGGGAKGYGGGNGGGGGAGYGGGAKGSGYGSGGGAGSGYGSGEEGGYDGGYAP Homology
BLAST of Tan0004103 vs. ExPASy Swiss-Prot
Match: Q9SIH2 (Glycine-rich protein DOT1 OS=Arabidopsis thaliana OX=3702 GN=DOT1 PE=2 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 3.5e-04 Identity = 123/261 (47.13%), Postives = 136/261 (52.11%), Query Frame = 0
BLAST of Tan0004103 vs. ExPASy Swiss-Prot
Match: P0C5C7 (Glycine-rich cell wall structural protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=GRP0.9 PE=2 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 6.0e-04 Identity = 108/224 (48.21%), Postives = 121/224 (54.02%), Query Frame = 0
BLAST of Tan0004103 vs. ExPASy Swiss-Prot
Match: A3C5A7 (Glycine-rich cell wall structural protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=GRP0.9 PE=2 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 6.0e-04 Identity = 108/224 (48.21%), Postives = 121/224 (54.02%), Query Frame = 0
BLAST of Tan0004103 vs. NCBI nr
Match: XP_038905926.1 (glycine-rich cell wall structural protein 1.8-like [Benincasa hispida]) HSP 1 Score: 222.2 bits (565), Expect = 4.6e-54 Identity = 194/261 (74.33%), Postives = 205/261 (78.54%), Query Frame = 0
BLAST of Tan0004103 vs. NCBI nr
Match: XP_023539508.1 (glycine-rich cell wall structural protein 1.8-like [Cucurbita pepo subsp. pepo] >XP_023539510.1 glycine-rich cell wall structural protein 1.8-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 221.1 bits (562), Expect = 1.0e-53 Identity = 187/262 (71.37%), Postives = 199/262 (75.95%), Query Frame = 0
BLAST of Tan0004103 vs. NCBI nr
Match: XP_023005512.1 (glycine-rich cell wall structural protein 1.8-like [Cucurbita maxima]) HSP 1 Score: 221.1 bits (562), Expect = 1.0e-53 Identity = 192/265 (72.45%), Postives = 204/265 (76.98%), Query Frame = 0
BLAST of Tan0004103 vs. NCBI nr
Match: XP_038903617.1 (glycine-rich cell wall structural protein 1.8-like [Benincasa hispida]) HSP 1 Score: 217.6 bits (553), Expect = 1.1e-52 Identity = 193/261 (73.95%), Postives = 204/261 (78.16%), Query Frame = 0
BLAST of Tan0004103 vs. NCBI nr
Match: XP_022924241.1 (glycine-rich cell wall structural protein 1.8-like [Cucurbita moschata]) HSP 1 Score: 213.4 bits (542), Expect = 2.2e-51 Identity = 187/283 (66.08%), Postives = 201/283 (71.02%), Query Frame = 0
BLAST of Tan0004103 vs. ExPASy TrEMBL
Match: A0A6J1KTC0 (glycine-rich cell wall structural protein 1.8-like OS=Cucurbita maxima OX=3661 GN=LOC111498476 PE=4 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 5.0e-54 Identity = 192/265 (72.45%), Postives = 204/265 (76.98%), Query Frame = 0
BLAST of Tan0004103 vs. ExPASy TrEMBL
Match: A0A6J1E911 (glycine-rich cell wall structural protein 1.8-like OS=Cucurbita moschata OX=3662 GN=LOC111431731 PE=4 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 1.0e-51 Identity = 187/283 (66.08%), Postives = 201/283 (71.02%), Query Frame = 0
BLAST of Tan0004103 vs. ExPASy TrEMBL
Match: A0A1S3BJM7 (glycine-rich cell wall structural protein 2-like OS=Cucumis melo OX=3656 GN=LOC103490774 PE=4 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 1.5e-50 Identity = 191/268 (71.27%), Postives = 206/268 (76.87%), Query Frame = 0
BLAST of Tan0004103 vs. ExPASy TrEMBL
Match: A0A0A0L1U7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009540 PE=4 SV=1) HSP 1 Score: 206.1 bits (523), Expect = 1.7e-49 Identity = 192/270 (71.11%), Postives = 206/270 (76.30%), Query Frame = 0
BLAST of Tan0004103 vs. ExPASy TrEMBL
Match: Q9ZWM2 (Glycine-rich protein-2 (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1) HSP 1 Score: 206.1 bits (523), Expect = 1.7e-49 Identity = 192/270 (71.11%), Postives = 206/270 (76.30%), Query Frame = 0
BLAST of Tan0004103 vs. TAIR 10
Match: AT2G36120.1 (Glycine-rich protein family ) HSP 1 Score: 47.0 bits (110), Expect = 2.5e-05 Identity = 123/261 (47.13%), Postives = 136/261 (52.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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