Tan0004044 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTGGTATCTTCCAAATTCATTGGAGATTAAAAACTTACCCTCTCTTTTCTTCTTAGGTTTAATTTGTAGAGTAAAAGCAAAAAAAAAAAAAAAAAGGGAAGAGAGGGGAAAAAAGAAAAAAGGAAAAAACCCAAAAAAAAAAAAGGGAAAATTGGAAGTGTTCTTTGGAGGAGAAAGAGTGTGGTGGACAGATTGCAGTTCCTTCCGATTGAGTCTTTTATCGATTAAAATTGTGTAATATGTAAAGCTGATTTATGGGTCGAAGCCATGGTGCGTTCATCTCTTCACTCAATTCTCGATTTGGGTGCTTCTTTTTCTGCAATTCTTCCTCATAATTAGGTATCTAACCTAACTTCATGTTTCTTCAACCTGGGGTTCTTTCTTTTTTTCCTTTTCTTTTCTTGAAATCTTGCGTTTGCTGCTCCTTATGGCGTATGGTTCGTCTCTTCTTTTCGCTTGGTGATTTTTTTTTTTTTTATAATTGTATCGACTGATTTTGGTTCTGGCGATTGGAACTTCAACTGGGTTTTGCTCTGTTCTTGTTTTGAAGTGATAGTGAATGCTAGGGAAAGGGATTGAGAAGATGGGGAAGACCCTTCTGCTGAATTGAATTATGAGAACACGAAGAAGTGTAGAGAAGCAATTTTTTTGGTATCCTGCTCATAGGTTTTCTGAGCCCATACTTGAGTTTTCCTGTGCGTTTTGTTGGAATTCATCTTGCGGCTTTCGTCTCCCTTGTAGAGGTATGCCTTAATTTCCCTTGCTGGGTTTTGGTTTTCCGTCTTTCATTGATTTTATGAACAAAACGAAAAATCTGTATACACATGCATATGACTTTGATATTTGGCTTGCTTGTCTGGTGTCTGCTATTGTAGTTCCGAGTTTTGGATTTTAAAGGGTCGTTAGAGGTTTGTTTCTTTTGTTCTTCACTGATTTTTCTCTGCCACTTAATGTGAATTCTGTTTTAACACTAACAACTAGTGCAAAAGTATTTGTGGTAGAAGTACTTTCTGCTCTTGTTTGGAACTTCTAAAAGTTCCACTGAATTCAAGGATTAAGTACAATTGTTCCATCTAGTTTCTGAGGACAAGATGATTTCCTCTCCAGTGTTTTTTTCTCTAGAGTTTTAGCAATATTTGGCCTGTATTTGATGACATTATGTGATATCTTGGTTTGTTTATTTCTTTGCTATTAGGAGATGTTAATTACTTTTTTGAGGTTGGGCAGGCGTTTGAAACTTAAAGGTCATAATACAATGAATAACGAGGAAGTGTCTAACACACCAAAGACATCTGTGAAGATCTCTTGGAACCATGGTGGCAAGCAAGTGGCTATTATTGGGTCATGGGATAACTGGGAGACAAGGTACTACTTTGCTGTTAAGGTGTTTGATTCTGAACTTCTTTGTCTAATATAGAACATTTCATCTTCTTCTGTTAGAGAGATCTTGCAGAGCATAGGAAAAGAATTTATTATTATCAAGACGCTTCCCTCGGGGATCTATCATTACCGCTTCATGGTTGATGGATGGTTGACAAGTGCTCCTGATTTGCCATGGGTTTGTGATGATTCAGGAAATTCTTACAATATTCTTGACTTGATGGTAAGTCATGACTTCTATTTCATCTGTGAAAATAATTGACACCTCATATGCCTTATAGCTTAAATATATACTAACTTGAGATTACATGGACTGTCTCCATGTTATTTTTTCCTTCTTTCTTTCATAAAAAAAAATGATTTGATAGATTTATATTATCTTTCAACCAAATTTTACGGAAATGAAAAAGGTTATATTGAGTTGTCTTTGTTAATTTTTCTATTAACATATACAGCGATTAAGATTTATACCGAGTACACGAGCTTTACAAATGAGAAAATATAGTTATAGTTTCTTCTGTTCTTTTTGACTTGGATGCACAACATTTGCTTGATGATTCGTTTCTATAGATCTTAAGAAGATGATAAAGGAAACATATCACTGCAAAGATTATCCAAAAGAACACTTTTTTTTTTCCAGATGAGATCAATTGTCTTTGCATGATTCTCTGACCATGTCCTTGAAAAGATATTTGATTTGGCCTGACCTTTCCCCTAAAATAACCAACTTTTCACTGAGTTTTAGAGTTCCCAATTCTAAGAGATATCTGATTGCTCTGTAAAGCTTGAAACACCAGAGCATCTATCAGAATGACAAATGTATATTCTGGGAGGTTACCATACTTAATGTTTTCCCAGCATTCAACTGATAGGAAAAGGAAATGGGATTGAAAAGTTAAGTTTGCAACTTATTCTTATTTTATTTCTTATCAAACCCACTTTATAGACTATTCAGTTAAGATTTTTTTTGAGATATCAAAACCACTTTTGGACTGTGTATTTTGGAATTGAGGAGCTTAAAAAGGGGAGGCAAGGTGTAGTGATCTATATGTTGTGATACATGAGCATTAAAAGCTCAGGTGTTTTAAAGGGTTACTAATTACTATGTCCATGGTGAAGTGGAAGAAAACTATAGATTTGGATGCTTGAGTATGTAATATTGAAAGAGAGAATTAAATCTAGGTACCTAGTTCTCCCGTCCATTGCCATGCAGCAAGATCTGCTGAATGAACAGGCCCTGATGCGTTTTTCATTAGCTTTGCCTCTTCTTTATTGGTATTCTTTGTTGATTGTGGTTAAATCTTAATAAAAGAGCTCTTTGTCTGCCCATTACTAATTTGAATTCATATTGAATTGTCTCACAGACACCTGTCTCGGAATTGCCTGAAAGTCTTTCTGAGTTTGAATTTCCTCCATCCCCACCATCTAGTTACGATAACCAATACTTCAACGACGACGATTTCAGTAGGCCTCCACCGGATCTACCGCCACAACTGCGAGAGACTATTTTGAATGAACCATCTTGCTGCACAAGTGGTCAGCAGTCTGGTGTGCAGCCTCAACAAACTGAATTAAATCATTTATACCAAAATAATGTTGGAGGTGAATTCATGGCACTTGGTTCAACATTCAGGTTTTGTGAAAAATATGTCACAATGTTACTTTTCAAGCCCTTGCTGAAAAGAAATTGATAGAGTTTGGTCAACTGTTTTTTTCCCCTTCTAAATTTGTGGCCTGCCCTTTTGTATTTTGATCTCGTAGCTGGGATTAACTGAGCAATGATTATTTATGTGAAGATTGTCATACTAATAGATTGAAGAGAGCTTGAAATAGGATTCATTACCATATGTTTTAATCTGTTCATTATGGATCTATTTCTCCATTCCCCATTTTTATTTTTATTTTTTTGTATTTTGAAGTTCTTTACATGTATTGGTTTCTTGAAAAAAGTCATGGAAATTGCTAGTGACCATGCCCTCAAAAGTACTTGTTTCTATGCAGTGAGGGATCTGCTAGATCAAAAGGGGTTTTGGATCAAATCAGCTACTAGGATGTGTAAACTCCATTTCTTTTACTTATGCAATATGTTTCACTTTCAAGCCATTGTAATTGAAATGCTGAATCCATTAAATTGTTCTCAG CTGGTATCTTCCAAATTCATTGGAGATTAAAAACTTACCCTCTCTTTTCTTCTTAGGTTTAATTTGTAGAGTAAAAGCAAAAAAAAAAAAAAAAAGGGAAGAGAGGGGAAAAAAGAAAAAAGGAAAAAACCCAAAAAAAAAAAAGGGAAAATTGGAAGTGTTCTTTGGAGGAGAAAGAGTGTGGTGGACAGATTGCAGTTCCTTCCGATTGAGTCTTTTATCGATTAAAATTGTGTAATATGTAAAGCTGATTTATGGGTCGAAGCCATGGTGCGTTCATCTCTTCACTCAATTCTCGATTTGGGTGCTTCTTTTTCTGCAATTCTTCCTCATAATTAGTGATAGTGAATGCTAGGGAAAGGGATTGAGAAGATGGGGAAGACCCTTCTGCTGAATTGAATTATGAGAACACGAAGAAGTGTAGAGAAGCAATTTTTTTGGTATCCTGCTCATAGGTTTTCTGAGCCCATACTTGAGTTTTCCTGTGCGTTTTGTTGGAATTCATCTTGCGGCTTTCGTCTCCCTTGTAGAGGCGTTTGAAACTTAAAGGTCATAATACAATGAATAACGAGGAAGTGTCTAACACACCAAAGACATCTGTGAAGATCTCTTGGAACCATGGTGGCAAGCAAGTGGCTATTATTGGGTCATGGGATAACTGGGAGACAAGAGAGATCTTGCAGAGCATAGGAAAAGAATTTATTATTATCAAGACGCTTCCCTCGGGGATCTATCATTACCGCTTCATGGTTGATGGATGGTTGACAAGTGCTCCTGATTTGCCATGGGTTTGTGATGATTCAGGAAATTCTTACAATATTCTTGACTTGATGACACCTGTCTCGGAATTGCCTGAAAGTCTTTCTGAGTTTGAATTTCCTCCATCCCCACCATCTAGTTACGATAACCAATACTTCAACGACGACGATTTCAGTAGGCCTCCACCGGATCTACCGCCACAACTGCGAGAGACTATTTTGAATGAACCATCTTGCTGCACAAGTGGTCAGCAGTCTGGTGTGCAGCCTCAACAAACTGAATTAAATCATTTATACCAAAATAATGTTGGAGGTGAATTCATGGCACTTGGTTCAACATTCAGGTTTTGTGAAAAATATGTCACAATGTTACTTTTCAAGCCCTTGCTGAAAAGAAATTGATAGAGTTTGGTCAACTGTTTTTTTCCCCTTCTAAATTTGTGGCCTGCCCTTTTGTATTTTGATCTCGTAGCTGGGATTAACTGAGCAATGATTATTTATGTGAAGATTGTCATACTAATAGATTGAAGAGAGCTTGAAATAGGATTCATTACCATATGTTTTAATCTGTTCATTATGGATCTATTTCTCCATTCCCCATTTTTATTTTTATTTTTTTGTATTTTGAAGTTCTTTACATGTATTGGTTTCTTGAAAAAAGTCATGGAAATTGCTAGTGACCATGCCCTCAAAAGTACTTGTTTCTATGCAGTGAGGGATCTGCTAGATCAAAAGGGGTTTTGGATCAAATCAGCTACTAGGATGTGTAAACTCCATTTCTTTTACTTATGCAATATGTTTCACTTTCAAGCCATTGTAATTGAAATGCTGAATCCATTAAATTGTTCTCAG ATGAATAACGAGGAAGTGTCTAACACACCAAAGACATCTGTGAAGATCTCTTGGAACCATGGTGGCAAGCAAGTGGCTATTATTGGGTCATGGGATAACTGGGAGACAAGAGAGATCTTGCAGAGCATAGGAAAAGAATTTATTATTATCAAGACGCTTCCCTCGGGGATCTATCATTACCGCTTCATGGTTGATGGATGGTTGACAAGTGCTCCTGATTTGCCATGGGTTTGTGATGATTCAGGAAATTCTTACAATATTCTTGACTTGATGACACCTGTCTCGGAATTGCCTGAAAGTCTTTCTGAGTTTGAATTTCCTCCATCCCCACCATCTAGTTACGATAACCAATACTTCAACGACGACGATTTCAGTAGGCCTCCACCGGATCTACCGCCACAACTGCGAGAGACTATTTTGAATGAACCATCTTGCTGCACAAGTGGTCAGCAGTCTGGTGTGCAGCCTCAACAAACTGAATTAAATCATTTATACCAAAATAATGTTGGAGGTGAATTCATGGCACTTGGTTCAACATTCAGGTTTTGTGAAAAATATGTCACAATGTTACTTTTCAAGCCCTTGCTGAAAAGAAATTGA MNNEEVSNTPKTSVKISWNHGGKQVAIIGSWDNWETREILQSIGKEFIIIKTLPSGIYHYRFMVDGWLTSAPDLPWVCDDSGNSYNILDLMTPVSELPESLSEFEFPPSPPSSYDNQYFNDDDFSRPPPDLPPQLRETILNEPSCCTSGQQSGVQPQQTELNHLYQNNVGGEFMALGSTFRFCEKYVTMLLFKPLLKRN Homology
BLAST of Tan0004044 vs. ExPASy Swiss-Prot
Match: Q9SCY5 (SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX=3702 GN=KINB2 PE=1 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 1.2e-45 Identity = 95/194 (48.97%), Postives = 124/194 (63.92%), Query Frame = 0
BLAST of Tan0004044 vs. ExPASy Swiss-Prot
Match: Q84VQ1 (SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX=3702 GN=KINB1 PE=1 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 1.2e-37 Identity = 86/194 (44.33%), Postives = 115/194 (59.28%), Query Frame = 0
BLAST of Tan0004044 vs. ExPASy Swiss-Prot
Match: O43741 (5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens OX=9606 GN=PRKAB2 PE=1 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.5e-21 Identity = 63/192 (32.81%), Postives = 95/192 (49.48%), Query Frame = 0
BLAST of Tan0004044 vs. ExPASy Swiss-Prot
Match: Q6PAM0 (5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus OX=10090 GN=Prkab2 PE=1 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.5e-21 Identity = 63/192 (32.81%), Postives = 95/192 (49.48%), Query Frame = 0
BLAST of Tan0004044 vs. ExPASy Swiss-Prot
Match: Q9QZH4 (5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Prkab2 PE=1 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 3.4e-21 Identity = 63/192 (32.81%), Postives = 94/192 (48.96%), Query Frame = 0
BLAST of Tan0004044 vs. NCBI nr
Match: XP_038902665.1 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X2 [Benincasa hispida]) HSP 1 Score: 398.7 bits (1023), Expect = 3.0e-107 Identity = 186/199 (93.47%), Postives = 192/199 (96.48%), Query Frame = 0
BLAST of Tan0004044 vs. NCBI nr
Match: XP_038902663.1 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X1 [Benincasa hispida] >XP_038902664.1 SNF1-related protein kinase regulatory subunit beta-2-like isoform X1 [Benincasa hispida]) HSP 1 Score: 398.7 bits (1023), Expect = 3.0e-107 Identity = 186/199 (93.47%), Postives = 192/199 (96.48%), Query Frame = 0
BLAST of Tan0004044 vs. NCBI nr
Match: XP_022985726.1 (SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita maxima] >XP_022985727.1 SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita maxima] >XP_022985728.1 SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita maxima] >XP_022985729.1 SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita maxima] >XP_022985730.1 SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita maxima]) HSP 1 Score: 397.1 bits (1019), Expect = 8.8e-107 Identity = 185/199 (92.96%), Postives = 191/199 (95.98%), Query Frame = 0
BLAST of Tan0004044 vs. NCBI nr
Match: XP_023513070.1 (SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita pepo subsp. pepo] >XP_023513071.1 SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita pepo subsp. pepo] >XP_023513072.1 SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita pepo subsp. pepo] >XP_023513073.1 SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita pepo subsp. pepo] >XP_023513074.1 SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 396.7 bits (1018), Expect = 1.1e-106 Identity = 185/199 (92.96%), Postives = 191/199 (95.98%), Query Frame = 0
BLAST of Tan0004044 vs. NCBI nr
Match: XP_022943899.1 (SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita moschata] >XP_022943900.1 SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita moschata] >XP_022943901.1 SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita moschata] >XP_022943902.1 SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita moschata] >XP_022943903.1 SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita moschata]) HSP 1 Score: 394.8 bits (1013), Expect = 4.4e-106 Identity = 184/199 (92.46%), Postives = 191/199 (95.98%), Query Frame = 0
BLAST of Tan0004044 vs. ExPASy TrEMBL
Match: A0A6J1J923 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucurbita maxima OX=3661 GN=LOC111483696 PE=3 SV=1) HSP 1 Score: 397.1 bits (1019), Expect = 4.3e-107 Identity = 185/199 (92.96%), Postives = 191/199 (95.98%), Query Frame = 0
BLAST of Tan0004044 vs. ExPASy TrEMBL
Match: A0A6J1FXH3 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucurbita moschata OX=3662 GN=LOC111448487 PE=3 SV=1) HSP 1 Score: 394.8 bits (1013), Expect = 2.1e-106 Identity = 184/199 (92.46%), Postives = 191/199 (95.98%), Query Frame = 0
BLAST of Tan0004044 vs. ExPASy TrEMBL
Match: A0A1S4E4K9 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucumis melo OX=3656 GN=LOC103502112 PE=3 SV=1) HSP 1 Score: 392.9 bits (1008), Expect = 8.0e-106 Identity = 183/199 (91.96%), Postives = 190/199 (95.48%), Query Frame = 0
BLAST of Tan0004044 vs. ExPASy TrEMBL
Match: A0A5D3CKW7 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G001460 PE=3 SV=1) HSP 1 Score: 390.6 bits (1002), Expect = 4.0e-105 Identity = 182/199 (91.46%), Postives = 189/199 (94.97%), Query Frame = 0
BLAST of Tan0004044 vs. ExPASy TrEMBL
Match: A0A5A7V520 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00180 PE=3 SV=1) HSP 1 Score: 390.6 bits (1002), Expect = 4.0e-105 Identity = 182/199 (91.46%), Postives = 189/199 (94.97%), Query Frame = 0
BLAST of Tan0004044 vs. TAIR 10
Match: AT4G16360.1 (5'-AMP-activated protein kinase beta-2 subunit protein ) HSP 1 Score: 184.5 bits (467), Expect = 8.3e-47 Identity = 95/194 (48.97%), Postives = 124/194 (63.92%), Query Frame = 0
BLAST of Tan0004044 vs. TAIR 10
Match: AT4G16360.3 (5'-AMP-activated protein kinase beta-2 subunit protein ) HSP 1 Score: 184.5 bits (467), Expect = 8.3e-47 Identity = 95/194 (48.97%), Postives = 124/194 (63.92%), Query Frame = 0
BLAST of Tan0004044 vs. TAIR 10
Match: AT4G16360.2 (5'-AMP-activated protein kinase beta-2 subunit protein ) HSP 1 Score: 178.7 bits (452), Expect = 4.6e-45 Identity = 94/194 (48.45%), Postives = 123/194 (63.40%), Query Frame = 0
BLAST of Tan0004044 vs. TAIR 10
Match: AT5G21170.1 (5'-AMP-activated protein kinase beta-2 subunit protein ) HSP 1 Score: 157.9 bits (398), Expect = 8.4e-39 Identity = 86/194 (44.33%), Postives = 115/194 (59.28%), Query Frame = 0
BLAST of Tan0004044 vs. TAIR 10
Match: AT5G21170.2 (5'-AMP-activated protein kinase beta-2 subunit protein ) HSP 1 Score: 157.9 bits (398), Expect = 8.4e-39 Identity = 86/194 (44.33%), Postives = 115/194 (59.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|