Tan0004031 (gene) Snake gourd v1

Overview
NameTan0004031
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
LocationLG04: 72773249 .. 72775929 (-)
RNA-Seq ExpressionTan0004031
SyntenyTan0004031
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTGCAGCGGCGCTGATGATACCAGCGGCCGTGGCGATCATGATTCTGCTCCTCAATCCCACCGGTTGTGATGCTCTTGCATCTTTCAAACCACTCCTTAACAACGACACTTTTAGTAAGTTTGGAAATATGTTTTGAAATAATATACCTCTTTATGAATGTTTATTGAAGAGTTTTTTTTTTCAAAAGTTTGTGAATGAAAAATTAGTGAAGTTTTTTCTTGTGCTATTGGGAAAAATACTTTTTTGATCCCTAAAATTTTAAGTTTGTGTCTATGTAGTCATGTATTTCGAAATCGAACAATCAATTCTCTAAATTTAGTTAAAGAAGTTGATGGAGGGTTGACGTCGATGTGTTTTAATATTAAACTAATAATTTTTTAAAAAAATAATAACTAAAATAATATAATATTAATAATATAAACAACTAACAATAAAAAAAACTCTTTTTTTTTCTTTTCTTCTTCTTCTTCATATTCTGCTTCTTCTTCCTCTCCCTCGCTGGTCTTCTTCGTATTCTGCTTCTTCTTCCTCTCCATCGCTGGTCTTCTTCTTCTCCATCACCGACCATTTCTTCTTTATCTTTTTTTTTTTCTCTTTTTATTCAAACCATTTCTTCCTCCTTCCTCCTTATTTTCTTCTTTTTTATCTTTCAGTTCTCGTTTAGTTCTAGATATATTTTTTGTTCCTTCAAATTTTGGAGAAAGACGACACCGGGTAGAGATCTCGAGTTTTTCTCTTTTCTTCCAACTCTTTCTTCCTCCTTCCTCCTTTTCTTCTTCTTTTTTTTTTATTTTTTTATTTTTCAGATATAGATTAGACCTAGATCTAATTTTTTTTCGTTCAAATTTTAGAGACGACGACACAGGACAGAGTCTCGAATTCAAATTTTGGAGTCCTTTTCTTCTTTCTTCTTCTCAATCGTGATGTGTGATGTCTTTTATCGTTAGATGTGAAAAATTGCATATGGGTTTAAGAGATCTCAAAAATTAAGTAGAAGAAAAGAAAACAAAATAGAAGACAAGGAAAAATGAAATGAGATATGAGGGAAGAAGGAGAGATGGTGTTTTTTTTTAATTTTTTTATATAAAAAAAAAGAAGATAAAGAAGAAGAAGAAGGTCAGCTAGAGAGGAAGAAGAAGCAGAATAGAAAGGTCGGCTCGAGAGGAAGAAGAAGCAGAATAGGAAGAAGAAAAGAAAAAAGAGTTTTTTTTATTGTTATTTGTTTATAATATTAATATTATATTGTTTTAGTTATTATTTTTTTAAAAAAATTATTATTTTAATATTAAAACACATCCACGTCAGCCCTCCGTTAACTTCTGTTAAATAATTAATGACCTAAGGACTTAATAGAACTATTTAACTAAATTTAGGGACTTGATTGTTTGATTTTGAAATACATGGACTAAATAAACACAAACTTGAAATATCAAGGACCAAAAAGGTATTTTTCCCGAAAATATTCTTATTCTTTCAAAAGTTACAATATTACTTTCGATGTTTTATAAATGTTTCAAAACTACCATTGGAGTAAAAATACATTAGTATGTTGAACTGAGAATCAACTTGACAGTAACTTGGAACGACGTGGTGATGACTAGAATGTTTGTCTGGATTAAGTCTAAAAGAACGACATTAAGATACGTCGACTTGTCGTCTAACATTCTAACGACTTTTATTTACTCTCATAGGTAGTAATTTTAAAAGTCGAAGGTAATATTGAAACTTTTGAAAGAATAAATGTATTTTTGAAATAGATGACAAAGTTCAAAGGTATTTTTTATAAGTTGAATATCAAAAAAAGGTTTATTTTAGTTTAGGTACTTTTAGTTTTAGCTTTTGGTATTTTTAGCTTTTAGGTTTTACCTTTGTATTTTTAGAACGTCGGATTATGTCTAATATTCATTAAAAAAAAGTTTGTACCTAATAGGTCCTTCAACTTTAAAAAACATTTAATAAACTTTCAATTTTATATCTAATATAATTCTCTGAAATCTAAAAGTATCTAATACTAATTCTTTAACTTTCAATTTTGGGTCCAATAATGCTATTAATATTTAAAATGTTTAAAAATTAGTCGATCAATTAAAATAAAATTATATTTTTGTGGTTAATTAAAATTATAAATTTTTAATTTTGTGCCGAATAGATTAATAAATTTTTAAAATGTCGAATAGGTATTTTTTGAATTTAAAAAAATATTGAATGGGTCACAAAATTACGTATTAGCCCAAAAACAAAAACTTTAAAGTTCATAAAACTATTAAATACAAAAAGGTTAATAAAAAATCATAAACCACTAGACAGATATAAAATAAACAATTTTCAAAAATAAAAAATTAAAAACCGTTATCAAACGAAGCGTTGTACTAATATTTTCCACATATAGTATAACTCTATATTTTAAATAATATTATATAAATTTTCTGTAACACAGATGCGGGTAAATACCTGGTCGGAGACCAAGATATAGAATCGGAGTTTCTCATGGAGTCGCACATCAGCCGGATTCTGGCAGAGTTTGAACAATTCGAAACTACCGCCACTGGCGATGCTAACGAAGCTGCTGGTGGCGGTTGCGGCCGGCCACCGCGCTACGACAGTTGCCTTGGCGATGGAGGAAATAATCCGCCACCGGAAAACTGTAGCCCCTTCAATCGCGAAAATCCCTGTTAG

mRNA sequence

ATGCCTGCAGCGGCGCTGATGATACCAGCGGCCGTGGCGATCATGATTCTGCTCCTCAATCCCACCGGTTGTGATGCTCTTGCATCTTTCAAACCACTCCTTAACAACGACACTTTTAATGCGGGTAAATACCTGGTCGGAGACCAAGATATAGAATCGGAGTTTCTCATGGAGTCGCACATCAGCCGGATTCTGGCAGAGTTTGAACAATTCGAAACTACCGCCACTGGCGATGCTAACGAAGCTGCTGGTGGCGGTTGCGGCCGGCCACCGCGCTACGACAGTTGCCTTGGCGATGGAGGAAATAATCCGCCACCGGAAAACTGTAGCCCCTTCAATCGCGAAAATCCCTGTTAG

Coding sequence (CDS)

ATGCCTGCAGCGGCGCTGATGATACCAGCGGCCGTGGCGATCATGATTCTGCTCCTCAATCCCACCGGTTGTGATGCTCTTGCATCTTTCAAACCACTCCTTAACAACGACACTTTTAATGCGGGTAAATACCTGGTCGGAGACCAAGATATAGAATCGGAGTTTCTCATGGAGTCGCACATCAGCCGGATTCTGGCAGAGTTTGAACAATTCGAAACTACCGCCACTGGCGATGCTAACGAAGCTGCTGGTGGCGGTTGCGGCCGGCCACCGCGCTACGACAGTTGCCTTGGCGATGGAGGAAATAATCCGCCACCGGAAAACTGTAGCCCCTTCAATCGCGAAAATCCCTGTTAG

Protein sequence

MPAAALMIPAAVAIMILLLNPTGCDALASFKPLLNNDTFNAGKYLVGDQDIESEFLMESHISRILAEFEQFETTATGDANEAAGGGCGRPPRYDSCLGDGGNNPPPENCSPFNRENPC
Homology
BLAST of Tan0004031 vs. NCBI nr
Match: KAG6607029.1 (hypothetical protein SDJN03_00371, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036725.1 hypothetical protein SDJN02_00345, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 177.6 bits (449), Expect = 6.5e-41
Identity = 90/118 (76.27%), Postives = 100/118 (84.75%), Query Frame = 0

Query: 1   MPAAALMIPAAVAIMILLLNPTGCDALASFKPLLNNDTFNAGKYLVGDQDIESEFLMESH 60
           M AAA++IPAA+AIMILLLNPT  DAL SFKP LNNDT  AGKYL+GDQDI+SEFLMESH
Sbjct: 1   MAAAAVIIPAAMAIMILLLNPTTSDALTSFKP-LNNDTSAAGKYLIGDQDIDSEFLMESH 60

Query: 61  ISRILAEFEQFETTATGDANEAAGGGCGRPPRYDSCLGDGGNNPPPENCSPFNRENPC 119
           ISRILA  + F+T+ T DAN+A+GGGCGRPPRYDSCLG   NNPPPENC  FNR NPC
Sbjct: 61  ISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

BLAST of Tan0004031 vs. NCBI nr
Match: XP_022948338.1 (uncharacterized protein LOC111452044 [Cucurbita moschata])

HSP 1 Score: 176.8 bits (447), Expect = 1.1e-40
Identity = 89/118 (75.42%), Postives = 100/118 (84.75%), Query Frame = 0

Query: 1   MPAAALMIPAAVAIMILLLNPTGCDALASFKPLLNNDTFNAGKYLVGDQDIESEFLMESH 60
           M AAA++IPAA+AIMILLLNPT  DAL SFKP LNNDT  AGKYL+GDQD++SEFLMESH
Sbjct: 1   MAAAAVIIPAAMAIMILLLNPTTSDALTSFKP-LNNDTSAAGKYLIGDQDLDSEFLMESH 60

Query: 61  ISRILAEFEQFETTATGDANEAAGGGCGRPPRYDSCLGDGGNNPPPENCSPFNRENPC 119
           ISRILA  + F+T+ T DAN+A+GGGCGRPPRYDSCLG   NNPPPENC  FNR NPC
Sbjct: 61  ISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

BLAST of Tan0004031 vs. NCBI nr
Match: XP_022998105.1 (uncharacterized protein LOC111492854 [Cucurbita maxima])

HSP 1 Score: 175.6 bits (444), Expect = 2.5e-40
Identity = 89/118 (75.42%), Postives = 99/118 (83.90%), Query Frame = 0

Query: 1   MPAAALMIPAAVAIMILLLNPTGCDALASFKPLLNNDTFNAGKYLVGDQDIESEFLMESH 60
           M AAA+MIPAA+AIMILLLNPT  DAL +FKP LNNDT  AGKYL+GDQDI+SEFLMESH
Sbjct: 1   MAAAAVMIPAAMAIMILLLNPTSSDALTTFKP-LNNDTSAAGKYLIGDQDIDSEFLMESH 60

Query: 61  ISRILAEFEQFETTATGDANEAAGGGCGRPPRYDSCLGDGGNNPPPENCSPFNRENPC 119
           ISRILA  + F+T+ T DAN+A+GGGC RPPRYDSCLG   NNPPPENC  FNR NPC
Sbjct: 61  ISRILAGSQDFQTSKTNDANKASGGGCERPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

BLAST of Tan0004031 vs. NCBI nr
Match: XP_023523220.1 (uncharacterized protein LOC111787479 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 174.9 bits (442), Expect = 4.2e-40
Identity = 89/118 (75.42%), Postives = 97/118 (82.20%), Query Frame = 0

Query: 1   MPAAALMIPAAVAIMILLLNPTGCDALASFKPLLNNDTFNAGKYLVGDQDIESEFLMESH 60
           M  AA MIPAA+AIMILLLNP   DAL SFKP LNNDT  AGKYL+GDQDI+SEFLMESH
Sbjct: 1   MATAAAMIPAAMAIMILLLNPINSDALTSFKP-LNNDTSAAGKYLIGDQDIDSEFLMESH 60

Query: 61  ISRILAEFEQFETTATGDANEAAGGGCGRPPRYDSCLGDGGNNPPPENCSPFNRENPC 119
           ISRILA  + F+T+ T DAN+A+GGGCGRPPRYDSCLG   NNPPPENC  FNR NPC
Sbjct: 61  ISRILAGSQNFQTSNTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

BLAST of Tan0004031 vs. NCBI nr
Match: KGN57781.1 (hypothetical protein Csa_009565 [Cucumis sativus])

HSP 1 Score: 152.9 bits (385), Expect = 1.7e-33
Identity = 76/119 (63.87%), Postives = 96/119 (80.67%), Query Frame = 0

Query: 1   MPAAALMIPAAVAIMILLLN-PTGCDALASFKPLLNNDTFNAGKYLVGDQDIESEFLMES 60
           M A+ALMIPAAV  MILLL+ P+ CDAL +F+PLL+N +   GK ++G++D+E EFLMES
Sbjct: 1   MGASALMIPAAVVTMILLLHIPSSCDALTTFQPLLSNHSSYGGKLMMGEEDMELEFLMES 60

Query: 61  HISRILAEFEQFETTATGDANEAAGGGCGRPPRYDSCLGDGGNNPPPENCSPFNRENPC 119
           HISRILA  + ++T +T +AN+A+GGGC RPPRYDSCLG   NNPPP NCSP+NR NPC
Sbjct: 61  HISRILASSKNYQTASTTNANKASGGGCDRPPRYDSCLGKKRNNPPPPNCSPYNRANPC 119

BLAST of Tan0004031 vs. ExPASy TrEMBL
Match: A0A6J1G927 (uncharacterized protein LOC111452044 OS=Cucurbita moschata OX=3662 GN=LOC111452044 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 5.4e-41
Identity = 89/118 (75.42%), Postives = 100/118 (84.75%), Query Frame = 0

Query: 1   MPAAALMIPAAVAIMILLLNPTGCDALASFKPLLNNDTFNAGKYLVGDQDIESEFLMESH 60
           M AAA++IPAA+AIMILLLNPT  DAL SFKP LNNDT  AGKYL+GDQD++SEFLMESH
Sbjct: 1   MAAAAVIIPAAMAIMILLLNPTTSDALTSFKP-LNNDTSAAGKYLIGDQDLDSEFLMESH 60

Query: 61  ISRILAEFEQFETTATGDANEAAGGGCGRPPRYDSCLGDGGNNPPPENCSPFNRENPC 119
           ISRILA  + F+T+ T DAN+A+GGGCGRPPRYDSCLG   NNPPPENC  FNR NPC
Sbjct: 61  ISRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

BLAST of Tan0004031 vs. ExPASy TrEMBL
Match: A0A6J1KBP5 (uncharacterized protein LOC111492854 OS=Cucurbita maxima OX=3661 GN=LOC111492854 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.2e-40
Identity = 89/118 (75.42%), Postives = 99/118 (83.90%), Query Frame = 0

Query: 1   MPAAALMIPAAVAIMILLLNPTGCDALASFKPLLNNDTFNAGKYLVGDQDIESEFLMESH 60
           M AAA+MIPAA+AIMILLLNPT  DAL +FKP LNNDT  AGKYL+GDQDI+SEFLMESH
Sbjct: 1   MAAAAVMIPAAMAIMILLLNPTSSDALTTFKP-LNNDTSAAGKYLIGDQDIDSEFLMESH 60

Query: 61  ISRILAEFEQFETTATGDANEAAGGGCGRPPRYDSCLGDGGNNPPPENCSPFNRENPC 119
           ISRILA  + F+T+ T DAN+A+GGGC RPPRYDSCLG   NNPPPENC  FNR NPC
Sbjct: 61  ISRILAGSQDFQTSKTNDANKASGGGCERPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

BLAST of Tan0004031 vs. ExPASy TrEMBL
Match: A0A0A0LCJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298580 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 8.3e-34
Identity = 76/119 (63.87%), Postives = 96/119 (80.67%), Query Frame = 0

Query: 1   MPAAALMIPAAVAIMILLLN-PTGCDALASFKPLLNNDTFNAGKYLVGDQDIESEFLMES 60
           M A+ALMIPAAV  MILLL+ P+ CDAL +F+PLL+N +   GK ++G++D+E EFLMES
Sbjct: 1   MGASALMIPAAVVTMILLLHIPSSCDALTTFQPLLSNHSSYGGKLMMGEEDMELEFLMES 60

Query: 61  HISRILAEFEQFETTATGDANEAAGGGCGRPPRYDSCLGDGGNNPPPENCSPFNRENPC 119
           HISRILA  + ++T +T +AN+A+GGGC RPPRYDSCLG   NNPPP NCSP+NR NPC
Sbjct: 61  HISRILASSKNYQTASTTNANKASGGGCDRPPRYDSCLGKKRNNPPPPNCSPYNRANPC 119

BLAST of Tan0004031 vs. ExPASy TrEMBL
Match: A0A5D3BS53 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002320 PE=4 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.4e-33
Identity = 75/119 (63.03%), Postives = 94/119 (78.99%), Query Frame = 0

Query: 1   MPAAALMIPAAVAIMILLLN-PTGCDALASFKPLLNNDTFNAGKYLVGDQDIESEFLMES 60
           M A+A MIPAAV  MILLLN P+ C+AL +F+PLL+N T    + +VG++D++ EF+MES
Sbjct: 1   MGASATMIPAAVVTMILLLNIPSSCEALTTFEPLLSNHTSYGEQLMVGEEDMDMEFIMES 60

Query: 61  HISRILAEFEQFETTATGDANEAAGGGCGRPPRYDSCLGDGGNNPPPENCSPFNRENPC 119
           HISRILA  + F+TT+T DAN+A+GGGCGRPPRYDSCLG   NNPPP NC  +NR NPC
Sbjct: 61  HISRILASSQNFQTTSTVDANKASGGGCGRPPRYDSCLGQKRNNPPPPNCGTYNRANPC 119

BLAST of Tan0004031 vs. ExPASy TrEMBL
Match: A0A0A0L711 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298570 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.4e-28
Identity = 68/117 (58.12%), Postives = 90/117 (76.92%), Query Frame = 0

Query: 3   AAALMIPAAVAIMILLLNPTGC-DALASFKPLLNNDTFNAGKYLVGDQDIESEFLMESHI 62
           A ALMIPAA+A+M+++L PT C  AL SFKPL N+ +    KY+V ++DI+S F+MESHI
Sbjct: 4   APALMIPAAMAMMLMMLIPTACGGALTSFKPLNNHTSGGLVKYMVEEEDIKSNFVMESHI 63

Query: 63  SRILAEFEQFETTATGDANEAAGGGCGRPPRYDSCLGDGGNNPPPENCSPFNRENPC 119
           SR+LA+ + FET++T +A + + G C RPPRYDSCLG   N PPP+NCS FNRE+PC
Sbjct: 64  SRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 120

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6607029.16.5e-4176.27hypothetical protein SDJN03_00371, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022948338.11.1e-4075.42uncharacterized protein LOC111452044 [Cucurbita moschata][more]
XP_022998105.12.5e-4075.42uncharacterized protein LOC111492854 [Cucurbita maxima][more]
XP_023523220.14.2e-4075.42uncharacterized protein LOC111787479 [Cucurbita pepo subsp. pepo][more]
KGN57781.11.7e-3363.87hypothetical protein Csa_009565 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A6J1G9275.4e-4175.42uncharacterized protein LOC111452044 OS=Cucurbita moschata OX=3662 GN=LOC1114520... [more]
A0A6J1KBP51.2e-4075.42uncharacterized protein LOC111492854 OS=Cucurbita maxima OX=3661 GN=LOC111492854... [more]
A0A0A0LCJ48.3e-3463.87Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298580 PE=4 SV=1[more]
A0A5D3BS532.4e-3363.03Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0L7111.4e-2858.12Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298570 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..118

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0004031.1Tan0004031.1mRNA