Tan0003969 (gene) Snake gourd v1

Overview


Name	Tan0003969
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Wound-induced protein 1
Location	LG11: 2423620 .. 2424248 (-)
RNA-Seq Expression	Tan0003969
Synteny	Tan0003969

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCACCAGTTCTCTTCTGGTTTTCCATTGCAATCCTCTTTCTTCCTCTCAAAATCTCTATCCCGTTTCTTGTTCATTTAAAAAGGAAATTTGGAGTCCGAGGCTTAGGCTAAGGCAAACTTCTGCAAGAACTGGCTAACTCTCAGGGAATTCTGGAGGAAAAAGATTCGAGTAATCAAAGGGTGGTTCTCGCCCTATATGAGGCCTTAAGCTCTCGAAACGTGAACACTGTTCACCAAATCCTCGCCCCCGATCTCGAGTGGTGGTTCCATGGTCCGCCCTCTCACCAATTTCTGATGCGCCTTCTCACTGGAGCCTCATCCAACGGCCAATCTTTTCAATTCGTTCCTCAATCAATCACTTCCTTTGGCCCCACCGTCCTCGTCGAAGGCTGCGATCCTACCCGTTCCATCTCCTGGATCCACGCCTGGACCATCACTGATGGGATAATCACTCAGGTTCGTGAATATTTCAATACCTCCCTTACTGTTACCCGTCTCGGAAACTCAACCGCCGCGTCGGAGATTTCCTCTGCCTCCTCGCTGCACCATTGCCCTTCTGTTTGGGAAAGTACTCTCTCCAATCACGTCGGAAAATCGGTGCCTGGACTCGTCTTGGCCATTTAA

mRNA sequence

ATGTCTCACCAGTTCTCTTCTGGTTTTCCATTGCAATCCTCTTTCTTCCTCTCAAAATCTCTATCCCAACTGGCTAACTCTCAGGGAATTCTGGAGGAAAAAGATTCGAGTAATCAAAGGGTGGTTCTCGCCCTATATGAGGCCTTAAGCTCTCGAAACGTGAACACTGTTCACCAAATCCTCGCCCCCGATCTCGAGTGGTGGTTCCATGGTCCGCCCTCTCACCAATTTCTGATGCGCCTTCTCACTGGAGCCTCATCCAACGGCCAATCTTTTCAATTCGTTCCTCAATCAATCACTTCCTTTGGCCCCACCGTCCTCGTCGAAGGCTGCGATCCTACCCGTTCCATCTCCTGGATCCACGCCTGGACCATCACTGATGGGATAATCACTCAGGTTCGTGAATATTTCAATACCTCCCTTACTGTTACCCGTCTCGGAAACTCAACCGCCGCGTCGGAGATTTCCTCTGCCTCCTCGCTGCACCATTGCCCTTCTGTTTGGGAAAGTACTCTCTCCAATCACGTCGGAAAATCGGTGCCTGGACTCGTCTTGGCCATTTAA

Coding sequence (CDS)

ATGTCTCACCAGTTCTCTTCTGGTTTTCCATTGCAATCCTCTTTCTTCCTCTCAAAATCTCTATCCCAACTGGCTAACTCTCAGGGAATTCTGGAGGAAAAAGATTCGAGTAATCAAAGGGTGGTTCTCGCCCTATATGAGGCCTTAAGCTCTCGAAACGTGAACACTGTTCACCAAATCCTCGCCCCCGATCTCGAGTGGTGGTTCCATGGTCCGCCCTCTCACCAATTTCTGATGCGCCTTCTCACTGGAGCCTCATCCAACGGCCAATCTTTTCAATTCGTTCCTCAATCAATCACTTCCTTTGGCCCCACCGTCCTCGTCGAAGGCTGCGATCCTACCCGTTCCATCTCCTGGATCCACGCCTGGACCATCACTGATGGGATAATCACTCAGGTTCGTGAATATTTCAATACCTCCCTTACTGTTACCCGTCTCGGAAACTCAACCGCCGCGTCGGAGATTTCCTCTGCCTCCTCGCTGCACCATTGCCCTTCTGTTTGGGAAAGTACTCTCTCCAATCACGTCGGAAAATCGGTGCCTGGACTCGTCTTGGCCATTTAA

Protein sequence

MSHQFSSGFPLQSSFFLSKSLSQLANSQGILEEKDSSNQRVVLALYEALSSRNVNTVHQILAPDLEWWFHGPPSHQFLMRLLTGASSNGQSFQFVPQSITSFGPTVLVEGCDPTRSISWIHAWTITDGIITQVREYFNTSLTVTRLGNSTAASEISSASSLHHCPSVWESTLSNHVGKSVPGLVLAI

Homology

[Close]

BLAST of Tan0003969 vs. ExPASy Swiss-Prot
Match: P20144 (Wound-induced protein 1 OS=Solanum tuberosum OX=4113 GN=WUN1 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.5e-34
Identity = 75/110 (68.18%), Postives = 90/110 (81.82%), Query Frame = 0


Query: 79  MRLLTG-ASSNGQSFQFVPQSITSFGPTVLVEGCDPTRSISWIHAWTITDGIITQVREYF 138
           M++LTG A  +  SFQF+ ++I  FG  VLVEGCDPTRSI+W+HAWT+TDG+ITQVREYF
Sbjct: 1   MQILTGTAKFDNASFQFLHKTIDVFGSVVLVEGCDPTRSITWVHAWTVTDGVITQVREYF 60

Query: 139 NTSLTVTRLGNSTAASEISSASSLHHCPSVWESTLSNHVGKSVPGLVLAI 188
           NTSLTVTR G     S+ISS ++L HCPSVWES+L N VGKSVPGLVLA+
Sbjct: 61  NTSLTVTRFGK----SDISSITTL-HCPSVWESSLPNRVGKSVPGLVLAL 105

[Close]

BLAST of Tan0003969 vs. ExPASy Swiss-Prot
Match: Q94AK6 (Senescence associated gene 20 OS=Arabidopsis thaliana OX=3702 GN=SAG20 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 4.5e-31
Identity = 68/110 (61.82%), Postives = 78/110 (70.91%), Query Frame = 0


Query: 79  MRLLT-GASSNGQSFQFVPQSITSFGPTVLVEGCDPTRSISWIHAWTITDGIITQVREYF 138
           MR+LT G S +  SF+FVP S+ SFG TV+ EGCD   SISWIHAWT+ +GIITQVREY 
Sbjct: 1   MRVLTGGVSPSSSSFEFVPLSVVSFGSTVIAEGCDAATSISWIHAWTVANGIITQVREYS 60

Query: 139 NTSLTVTRLGNSTAASEISSASSLHHCPSVWESTLSNHVGKSVPGLVLAI 188
           NTSLTVTR+GN  A    +  +   HC SVWES  S   GK VPGLVLAI
Sbjct: 61  NTSLTVTRIGNVVAGRRSAEIAPPSHCSSVWESQFSGRAGKPVPGLVLAI 110

[Close]

BLAST of Tan0003969 vs. NCBI nr
Match: KAE8646573.1 (hypothetical protein Csa_005623 [Cucumis sativus])

HSP 1 Score: 305.8 bits (782), Expect = 2.5e-79
Identity = 153/178 (85.96%), Postives = 165/178 (92.70%), Query Frame = 0


Query: 19  KSLSQLANSQGILEEKDSSNQRVVLALYEALSSRNVNTVHQILAPDLEWWFHGPPSHQFL 78
           K L +LANSQGILEE+DSSNQRVVLALYEALSSRNVNTVHQILAPDLEWWFHGPPSHQFL
Sbjct: 40  KLLQELANSQGILEEEDSSNQRVVLALYEALSSRNVNTVHQILAPDLEWWFHGPPSHQFL 99

Query: 79  MRLLTGASSNGQSFQFVPQSITSFGPTVLVEGCDPTRSISWIHAWTITDGIITQVREYFN 138
           MRLLTGASSNGQSFQFVPQSITSFG TVLVEGCDP+RSISWIHAWT+TDGIITQ+REYFN
Sbjct: 100 MRLLTGASSNGQSFQFVPQSITSFGSTVLVEGCDPSRSISWIHAWTVTDGIITQLREYFN 159

Query: 139 TSLTVTRLG---------NSTAASEISSASSLHHCPSVWESTLSNHVGKSVPGLVLAI 188
           TSLTVTR+G         +S+A+SEISSA+SLHHCPSVWES++SN VGKSVPGLVLAI
Sbjct: 160 TSLTVTRVGDPSEYPSTSSSSASSEISSAASLHHCPSVWESSVSNQVGKSVPGLVLAI 217

[Close]

BLAST of Tan0003969 vs. NCBI nr
Match: KAA0052041.1 (wound-induced protein 1 [Cucumis melo var. makuwa] >TYK04520.1 wound-induced protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 303.9 bits (777), Expect = 9.5e-79
Identity = 158/197 (80.20%), Postives = 172/197 (87.31%), Query Frame = 0


Query: 1   MSHQFSSGFPLQSS--FFLSKSLSQLANSQGILEEKDSSNQRVVLALYEALSSRNVNTVH 60
           +S + S+G  L S       K L +LANSQGILEE+DSSNQRVVLALYEALSSRNVNTVH
Sbjct: 10  LSREISTGVSLWSPRLRLRQKLLQELANSQGILEEEDSSNQRVVLALYEALSSRNVNTVH 69

Query: 61  QILAPDLEWWFHGPPSHQFLMRLLTGASSNGQSFQFVPQSITSFGPTVLVEGCDPTRSIS 120
           QILAPDLEWWFHGPPSHQFLMRLLTGASSNGQSFQFVPQSITSFG TVLVEGCDP+RSIS
Sbjct: 70  QILAPDLEWWFHGPPSHQFLMRLLTGASSNGQSFQFVPQSITSFGSTVLVEGCDPSRSIS 129

Query: 121 WIHAWTITDGIITQVREYFNTSLTVTRLG--------NSTAASEISSASSLHHCPSVWES 180
           WIHAWTITDGIITQ+REYFNTSLTVTR+G        +S++ASEIS+A SLHHCPSVWES
Sbjct: 130 WIHAWTITDGIITQLREYFNTSLTVTRVGDPTEYPSTSSSSASEISTAPSLHHCPSVWES 189

Query: 181 TLSNHVGKSVPGLVLAI 188
           ++SN VGKSVPGLVLAI
Sbjct: 190 SVSNQVGKSVPGLVLAI 206

[Close]

BLAST of Tan0003969 vs. NCBI nr
Match: KAG6602601.1 (Wound-induced protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 297.4 bits (760), Expect = 8.9e-77
Identity = 151/166 (90.96%), Postives = 155/166 (93.37%), Query Frame = 0


Query: 29  GILEE-KDSSNQRVVLALYEALSSRNVNTVHQILAPDLEWWFHGPPSHQFLMRLLTGASS 88
           GILEE  D SN+RVVLALYEAL+SRNVNTVHQILAPDLEWWFHGPPSHQFLMRLLTGASS
Sbjct: 39  GILEENSDCSNRRVVLALYEALTSRNVNTVHQILAPDLEWWFHGPPSHQFLMRLLTGASS 98

Query: 89  NGQSFQFVPQSITSFGPTVLVEGCDPTRSISWIHAWTITDGIITQVREYFNTSLTVTRLG 148
           NGQSFQFVPQSITSFGPTVLVEGCDPTRSISWIHAWTITDGIITQVREYFNTSLTVTRLG
Sbjct: 99  NGQSFQFVPQSITSFGPTVLVEGCDPTRSISWIHAWTITDGIITQVREYFNTSLTVTRLG 158

Query: 149 N------STAASEISSASSLHHCPSVWESTLSNHVGKSVPGLVLAI 188
           N      S+ ASEISSASSLHHCPSVWES+LSN VGKSVPGLVLAI
Sbjct: 159 NPTDSPSSSVASEISSASSLHHCPSVWESSLSNQVGKSVPGLVLAI 204

[Close]

BLAST of Tan0003969 vs. NCBI nr
Match: KAG7033280.1 (Wound-induced protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 293.1 bits (749), Expect = 1.7e-75
Identity = 149/166 (89.76%), Postives = 153/166 (92.17%), Query Frame = 0


Query: 29  GILEE-KDSSNQRVVLALYEALSSRNVNTVHQILAPDLEWWFHGPPSHQFLMRLLTGASS 88
           GILEE  D SN+RVVLALYEAL+SRNVNTVHQILAPDLEWWFHGPPSHQFLMRLLTGASS
Sbjct: 39  GILEENSDCSNRRVVLALYEALTSRNVNTVHQILAPDLEWWFHGPPSHQFLMRLLTGASS 98

Query: 89  NGQSFQFVPQSITSFGPTVLVEGCDPTRSISWIHAWTITDGIITQVREYFNTSLTVTRLG 148
           NGQSF FVPQSITSFGPTVLVEGCDPTRSISWIHAWTITDGIITQVREYFNTSLTVTRLG
Sbjct: 99  NGQSFLFVPQSITSFGPTVLVEGCDPTRSISWIHAWTITDGIITQVREYFNTSLTVTRLG 158

Query: 149 N------STAASEISSASSLHHCPSVWESTLSNHVGKSVPGLVLAI 188
           N      S+ ASEISS SSLHHCPSVWES+LSN VGKSVPGLVLAI
Sbjct: 159 NPTDSPSSSVASEISSVSSLHHCPSVWESSLSNQVGKSVPGLVLAI 204

[Close]

BLAST of Tan0003969 vs. NCBI nr
Match: KAG6578463.1 (Wound-induced protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 288.9 bits (738), Expect = 3.2e-74
Identity = 147/171 (85.96%), Postives = 159/171 (92.98%), Query Frame = 0


Query: 17  LSKSLSQLANSQGILEEKDSSNQRVVLALYEALSSRNVNTVHQILAPDLEWWFHGPPSHQ 76
           LS S  Q+ + +GILEE+DSSNQRVVLALYEALSSRNVNTVHQILAPDLEWWFHGPPSHQ
Sbjct: 14  LSVSQRQI-SFEGILEEEDSSNQRVVLALYEALSSRNVNTVHQILAPDLEWWFHGPPSHQ 73

Query: 77  FLMRLLTGASSNGQSFQFVPQSITSFGPTVLVEGCDPTRSISWIHAWTITDGIITQVREY 136
           FLMRLLTGASS+GQSFQFVPQSITSFGPTVLVEGCDP+RSISWIHAWT+TDGIITQVREY
Sbjct: 74  FLMRLLTGASSDGQSFQFVPQSITSFGPTVLVEGCDPSRSISWIHAWTVTDGIITQVREY 133

Query: 137 FNTSLTVTRLGNSTAASEISSASSLHHCPSVWESTLSNHVGKSVPGLVLAI 188
           FN+SLTVTRLG+ T  S  SSASS +HCPS+WES+LSN VGKSVPGLVLAI
Sbjct: 134 FNSSLTVTRLGDPT-DSPSSSASSPYHCPSIWESSLSNQVGKSVPGLVLAI 182

[Close]

BLAST of Tan0003969 vs. ExPASy TrEMBL
Match: A0A5D3BZG9 (Wound-induced protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001370 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 4.6e-79
Identity = 158/197 (80.20%), Postives = 172/197 (87.31%), Query Frame = 0


Query: 1   MSHQFSSGFPLQSS--FFLSKSLSQLANSQGILEEKDSSNQRVVLALYEALSSRNVNTVH 60
           +S + S+G  L S       K L +LANSQGILEE+DSSNQRVVLALYEALSSRNVNTVH
Sbjct: 10  LSREISTGVSLWSPRLRLRQKLLQELANSQGILEEEDSSNQRVVLALYEALSSRNVNTVH 69

Query: 61  QILAPDLEWWFHGPPSHQFLMRLLTGASSNGQSFQFVPQSITSFGPTVLVEGCDPTRSIS 120
           QILAPDLEWWFHGPPSHQFLMRLLTGASSNGQSFQFVPQSITSFG TVLVEGCDP+RSIS
Sbjct: 70  QILAPDLEWWFHGPPSHQFLMRLLTGASSNGQSFQFVPQSITSFGSTVLVEGCDPSRSIS 129

Query: 121 WIHAWTITDGIITQVREYFNTSLTVTRLG--------NSTAASEISSASSLHHCPSVWES 180
           WIHAWTITDGIITQ+REYFNTSLTVTR+G        +S++ASEIS+A SLHHCPSVWES
Sbjct: 130 WIHAWTITDGIITQLREYFNTSLTVTRVGDPTEYPSTSSSSASEISTAPSLHHCPSVWES 189

Query: 181 TLSNHVGKSVPGLVLAI 188
           ++SN VGKSVPGLVLAI
Sbjct: 190 SVSNQVGKSVPGLVLAI 206

[Close]

BLAST of Tan0003969 vs. ExPASy TrEMBL
Match: A0A6A1VMJ2 (Wound-induced protein 1 OS=Morella rubra OX=262757 GN=CJ030_MR5G017372 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 3.9e-62
Identity = 129/191 (67.54%), Postives = 153/191 (80.10%), Query Frame = 0


Query: 10  PLQSSFFLSKSLSQLANSQGILEEKDSSNQRVVLALYEALSSRNVNTVHQILAPDLEWWF 69
           P+  ++ L++   +LANSQ  LE+ DSSNQRVVLALY ALSS +V TVH+I+A DLEWWF
Sbjct: 46  PIPIAYRLARLWLELANSQETLEDSDSSNQRVVLALYAALSSHDVATVHRIVAADLEWWF 105

Query: 70  HGPPSHQFLMRLLTG-ASSNGQSFQFVPQSITSFGPTVLVEGCDPTRSISWIHAWTITDG 129
           HGPPSHQFLMRLLTG A+ +  SF+FVPQSITSFGPTVLVEGCD  RSI+W+HAWT+TDG
Sbjct: 106 HGPPSHQFLMRLLTGTATDSATSFRFVPQSITSFGPTVLVEGCDHARSIAWVHAWTVTDG 165

Query: 130 IITQVREYFNTSLTVTRLGNS------------TAASEISSASSLHHCPSVWESTLSNHV 188
           IITQVREY NTSLTVTRLGNS            +++S  S  +SL HCPS+WES++S+ V
Sbjct: 166 IITQVREYLNTSLTVTRLGNSHTSSPPSDFSTPSSSSSTSEITSL-HCPSLWESSVSSRV 225

[Close]

BLAST of Tan0003969 vs. ExPASy TrEMBL
Match: A0A314Y1I0 (Wound-induced protein 1-like OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_10679 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 4.3e-61
Identity = 127/198 (64.14%), Postives = 152/198 (76.77%), Query Frame = 0


Query: 5   FSSGFPLQSSFFLSKSLSQLANSQGILEEKDSSNQRVVLALYEALSSRNVNTVHQILAPD 64
           F   FP ++++ L     +LANSQ  LE+ DSSNQRVVLALYEALSSR+V+TV+QI+APD
Sbjct: 43  FHFPFPWETAWVLR---LELANSQETLEDSDSSNQRVVLALYEALSSRDVHTVYQIVAPD 102

Query: 65  LEWWFHGPPSHQFLMRLLTGASSNGQSFQFVPQSITSFGPTVLVEGCDPTRSISWIHAWT 124
           +EWWFHGPP+HQFLMRLLTG     +SFQF+PQS+  FGPTVLVEGCD   SISW+HAWT
Sbjct: 103 IEWWFHGPPTHQFLMRLLTG--DQNESFQFIPQSVACFGPTVLVEGCDRDCSISWVHAWT 162

Query: 125 ITDGIITQVREYFNTSLTVTRLGNSTAASEISSAS---------------SLHHCPSVWE 184
           +T GIITQVREYFNTSLTVTRLGN+T+ S  + +S               +  HCPSVWE
Sbjct: 163 VTHGIITQVREYFNTSLTVTRLGNNTSPSSSAQSSPSSFSSKSSSSTAEITSFHCPSVWE 222

Query: 185 STLSNHVGKSVPGLVLAI 188
           S++S+ VGKSVPGLVLAI
Sbjct: 223 SSVSDRVGKSVPGLVLAI 235

[Close]

BLAST of Tan0003969 vs. ExPASy TrEMBL
Match: A0A7J0DEU5 (Senescence associated gene 20 OS=Actinidia rufa OX=165716 GN=Acr_00g0029600 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 7.4e-61
Identity = 135/189 (71.43%), Postives = 155/189 (82.01%), Query Frame = 0


Query: 5   FSSGFP-LQSSFFL-SKSLSQLANSQGILEEKDSSNQRVVLALYEALSSRNVNTVHQILA 64
           FSS  P L SS  L +  L +LAN Q  LEE  S NQRVVLALYEALSSR+V+TVH++LA
Sbjct: 20  FSSPPPYLNSSLSLCALVLQELANPQESLEE--SGNQRVVLALYEALSSRDVDTVHKLLA 79

Query: 65  PDLEWWFHGPPSHQFLMRLLTG-ASSNGQSFQFVPQSITSFGPTVLVEGCDPTRSISWIH 124
            DLEWWFHGPP HQF+MRLLTG A+S   SF FVPQS+ +FG TVLVEGCD TRSI+W+H
Sbjct: 80  SDLEWWFHGPPPHQFMMRLLTGTATSPSDSFDFVPQSVAAFGSTVLVEGCDHTRSIAWVH 139

Query: 125 AWTITDGIITQVREYFNTSLTVTRLGNS--TAASEISSAS-SLHHCPSVWESTLSNHVGK 184
           AWT+TDGIITQVREYFNTSLTVTRLGN+  ++ S++S AS +  HCPSVWES+LSN VGK
Sbjct: 140 AWTVTDGIITQVREYFNTSLTVTRLGNTDRSSPSDLSPASITALHCPSVWESSLSNQVGK 199

Query: 185 SVPGLVLAI 188
           SVPGLVLAI
Sbjct: 200 SVPGLVLAI 206

[Close]

BLAST of Tan0003969 vs. ExPASy TrEMBL
Match: A0A7J6HR99 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_023048 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.3e-60
Identity = 131/196 (66.84%), Postives = 149/196 (76.02%), Query Frame = 0


Query: 6   SSGFPLQSSFFLSKSLSQLANSQGILEEKDSSNQRVVLALYEALSSRNVNTVHQILAPDL 65
           SS F    S     +  +LANSQ ILEE  SSNQRVV ALYEALSSR+V+ VH +L+PDL
Sbjct: 8   SSQFTRVPSLTPRDARQELANSQEILEESGSSNQRVVRALYEALSSRDVDKVHSLLSPDL 67

Query: 66  EWWFHGPPSHQFLMRLLTGASS-NGQSFQFVPQSITSFGPTVLVEGCDPTRSISWIHAWT 125
           +WWFHGPPSHQFLMRLLTG SS +   FQF PQS  SFGPTVLVEGCD   SI+W+HAWT
Sbjct: 68  DWWFHGPPSHQFLMRLLTGVSSPDDVVFQFQPQSFASFGPTVLVEGCDSDLSIAWVHAWT 127

Query: 126 ITDGIITQVREYFNTSLTVTRLGNST-----------AASEISSASSL--HHCPSVWEST 185
           +TDGIITQVREYFNTSLTVTRLG+S+           A+S  SS S +  +HCPSVWES+
Sbjct: 128 VTDGIITQVREYFNTSLTVTRLGDSSSSYGKYSPLGFASSSSSSTSEIASYHCPSVWESS 187

Query: 186 LSNHVGKSVPGLVLAI 188
           LS+ VGKSVPGLVLAI
Sbjct: 188 LSSRVGKSVPGLVLAI 203

[Close]

BLAST of Tan0003969 vs. TAIR 10
Match: AT3G10985.1 (senescence associated gene 20 )

HSP 1 Score: 136.0 bits (341), Expect = 3.2e-32
Identity = 68/110 (61.82%), Postives = 78/110 (70.91%), Query Frame = 0


Query: 79  MRLLT-GASSNGQSFQFVPQSITSFGPTVLVEGCDPTRSISWIHAWTITDGIITQVREYF 138
           MR+LT G S +  SF+FVP S+ SFG TV+ EGCD   SISWIHAWT+ +GIITQVREY 
Sbjct: 1   MRVLTGGVSPSSSSFEFVPLSVVSFGSTVIAEGCDAATSISWIHAWTVANGIITQVREYS 60

Query: 139 NTSLTVTRLGNSTAASEISSASSLHHCPSVWESTLSNHVGKSVPGLVLAI 188
           NTSLTVTR+GN  A    +  +   HC SVWES  S   GK VPGLVLAI
Sbjct: 61  NTSLTVTRIGNVVAGRRSAEIAPPSHCSSVWESQFSGRAGKPVPGLVLAI 110

[Close]

BLAST of Tan0003969 vs. TAIR 10
Match: AT5G01740.1 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 111.3 bits (277), Expect = 8.4e-25
Identity = 60/156 (38.46%), Postives = 88/156 (56.41%), Query Frame = 0


Query: 35  DSSNQRVVLALYEALSSRNVNTVHQILAPDLEWWFHGPPSHQFLMRLLTGASSNGQSFQF 94
           +  NQ  +  LY+AL   + +TV +++A D+EWWFHGP   Q +MRLLTG      SF+F
Sbjct: 15  EMKNQGTIELLYKALQQGDTSTVTKVVASDVEWWFHGPHDCQHMMRLLTGEPPRQVSFRF 74

Query: 95  VPQSITSFGP---TVLVEGCDPTRSISWIHAWTITDGIITQVREYFNTSLTVTRLGNSTA 154
            P S+    P    V+ EG + +R + W+H W + DG++T++REYFNT LTVT       
Sbjct: 75  EPSSVQVVVPGHDCVIAEGWEGSR-VYWVHVWKLKDGVVTELREYFNTWLTVTDYSLGAV 134

Query: 155 ASEISSASSLHHCPSVWESTLSNHVGKSVPGLVLAI 188
             ++          +VWES   +    S+P L+LAI
Sbjct: 135 GWDMGRC-------TVWESVPRDLARGSLPSLLLAI 162

The following BLAST results are available for this feature:

BLAST of Tan0003969 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P20144	1.5e-34	68.18	Wound-induced protein 1 OS=Solanum tuberosum OX=4113 GN=WUN1 PE=2 SV=1	[more]
Q94AK6	4.5e-31	61.82	Senescence associated gene 20 OS=Arabidopsis thaliana OX=3702 GN=SAG20 PE=2 SV=1	[more]

BLAST of Tan0003969 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8646573.1	2.5e-79	85.96	hypothetical protein Csa_005623 [Cucumis sativus]	[more]
KAA0052041.1	9.5e-79	80.20	wound-induced protein 1 [Cucumis melo var. makuwa] >TYK04520.1 wound-induced pro...	[more]
KAG6602601.1	8.9e-77	90.96	Wound-induced protein 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7033280.1	1.7e-75	89.76	Wound-induced protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6578463.1	3.2e-74	85.96	Wound-induced protein 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Tan0003969 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BZG9	4.6e-79	80.20	Wound-induced protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6A1VMJ2	3.9e-62	67.54	Wound-induced protein 1 OS=Morella rubra OX=262757 GN=CJ030_MR5G017372 PE=4 SV=1	[more]
A0A314Y1I0	4.3e-61	64.14	Wound-induced protein 1-like OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Py...	[more]
A0A7J0DEU5	7.4e-61	71.43	Senescence associated gene 20 OS=Actinidia rufa OX=165716 GN=Acr_00g0029600 PE=4...	[more]
A0A7J6HR99	1.3e-60	66.84	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_023048 PE=4 SV=1	[more]

BLAST of Tan0003969 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10985.1	3.2e-32	61.82	senescence associated gene 20	[more]
AT5G01740.1	8.4e-25	38.46	Nuclear transport factor 2 (NTF2) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.450.50		coord: 27..154 e-value: 1.6E-15 score: 59.1
None	No IPR available	PANTHER	PTHR33703:SF15	SENESCENCE ASSOCIATED GENE 20	coord: 13..187
IPR009798	Wound-induced protein Wun1-like	PFAM	PF07107	WI12	coord: 79..187 e-value: 9.4E-47 score: 157.6
IPR009798	Wound-induced protein Wun1-like	PANTHER	PTHR33703	OS07G0691300 PROTEIN	coord: 13..187
IPR032710	NTF2-like domain superfamily	SUPERFAMILY	54427	NTF2-like	coord: 37..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0003969.1	Tan0003969.1	mRNA