
Tan0003350 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTGAAAGTTGAAAATTGATGCACCTAGCAATATTATTAAAGTATCAAACTAGAATTACAATTTCCTTCCCTATCTAGGTAATGTCAATAGGAAGATTCTTAGCTATGGACAGCTGCATTTTCATAACACTCTTCTTCAACTTTCCTCTTTTAAAAAAAACAACAAAATAAAATTAAAAACAAAGAAAAAGAGTGAGAGAGAGAAAAAGAGGAAAAAAGAACTAAAAACTTATCCTTTCCTTTTCATTTCTAGGCAATCCCAGCAAGCAACCGACACCCTTTTTTAGTCCTTTTGGCCCCATTCCTGTGAGGCTGTTACTTGTTAGAATCACCTATAAAAATTCGCCAACCATAATCAAATAATCATAATAATCAAAGTATATTGAGAGAGAATAAAAACCATTCTCAGAAATCAAGCACAGAAAAAGCTAGAAAGAATCCAAGAGGGTTTATCATTTGAGTTCTTGGTGGGTCCCTACTGACCCATCAATCCTTTTGTCAGTACTGTTTGAGGAAAAATAAGAAGGGATAAGCACTCAAAACAACGTCAAATCCTTCTTTGCTTTTGGCTCAGTCCCTGTTCCAAGAGCTAGAAGACACCAGAGACCTGGTCCAAGGACCTGCAATTTCCATCTAAAGTTTGAAAATTTTGATTCTTCTTCCATATAAAGTCACCCCCTGTTGCGAGTTCTTCTTTCTAGTTCTTCCAGAGAAAGAAAAATGGACCTCCATGAGTGGGAAATCCTCTCTGATGATGGATTGCTTGATTACAAAGATGATGAGAAGAAGATCGTCTCGGCTAAGAGAAGTGCTTCTGCTTCTGATGCCAAGATTGTGTTTGACATGAACCATTTCTTGTGCCCGTCATCAATGGATTCTTCCAAGCACATCAGCCAACCACCGAGGAAGCCGATGATCCCTGTTCATCTTCAATTGGACTCGCCAATTCTCAAACTCCCTGATGATTCACTGGTAATGAAAGAGAAAGACAGGGTGCCTATGGTGATGATCGGTGTTGTGCCATCGGCCGTGAGTGAGAAGGAGAATCAGAAAGGAGCTGTGGAAGAAGCCGATCAAGACACTGTTACTCAAGTTTTCTTCAAGAAAATGAAGGAAAATGAATTCGTCGACATGAAAATAGACTCACCCAGATCCAGCAACAAGGGAACAAAGGCTCAGATTGATGTAGGGTGTTATCAGTTTGATGATGGGGGTGAGGCTAAAGAGAACATTACAAACTCCCCCAGAATGAATTTGATGAACCAGAAAAGCAACAAGGAGGATGGTGCCAAAGACGAGATGAATTGGGATGGATCCATCGGTGGGTTGAACATATTAAAGTGGAGCTTAAATGGGATTGGAGCCATCTGCTCCTTTGGTGTTGCAGCTGCCACTATTTGTATTCTGTTTTATGGAGGCAACCAACAAAAGCTGAGAATTCAGATCTACACCGACGATAAGGTCAGCAATTCAAAACGTTTATTACAAAATGATCTTGAAATAGCATAGTGAGGTTAGGAATTAAATGAAAATGTTCAGTCCATATAACCCATAAACTGTAGCAGAGCTTATTTCATAGCATTTGGTTGCAGAAATTAAAGCATGCAGTACAGCAAGCTACTAGATTAAATGAAGCAATGTCAGCAGCAAGAGGACTTCCACAAACAAGAGCTCACATAACCTGTGGTGGCCGCTATGATGGGCTCTAAGGAATCTAAGAGTTGGCTCTGCCTTGAAGACATACTCAAGGCTAGAGGAATAATTGAGGTGGATTTGCCAAAAAAATAAACCCAATTCTATCACTTTACTCAAAGTTTACCATGTCTGTAGATAGAGATTATAATTTGAAGTACAAAGAATAGGTTCAGGAGTCCTGCTAGGAGATTCCTACTGAGTATGCCAATAGTGTTGTTCAACTATGAATCTTATGGGTTTTTTATGGTTTTGTTGTGTGTTGTGGGTCAGAAGAAGTGGTACAATCTTTATACACATGAGACAGTGGAAATGAAGGAGATTATTTTAGAAGCATAAATCATAGTCTCAATCCTTAATGGTTAAAACACTATTTTTAGTCCATATACAATTAACTTTTCTGACGTGG TTTGAAAGTTGAAAATTGATGCACCTAGCAATATTATTAAAGTATCAAACTAGAATTACAATTTCCTTCCCTATCTAGGTAATGTCAATAGGAAGATTCTTAGCTATGGACAGCTGCATTTTCATAACACTCTTCTTCAACTTTCCTCTTTTAAAAAAAACAACAAAATAAAATTAAAAACAAAGAAAAAGAGTGAGAGAGAGAAAAAGAGGAAAAAAGAACTAAAAACTTATCCTTTCCTTTTCATTTCTAGGCAATCCCAGCAAGCAACCGACACCCTTTTTTAGTCCTTTTGGCCCCATTCCTGTGAGGCTGTTACTTGTTAGAATCACCTATAAAAATTCGCCAACCATAATCAAATAATCATAATAATCAAAGTATATTGAGAGAGAATAAAAACCATTCTCAGAAATCAAGCACAGAAAAAGCTAGAAAGAATCCAAGAGGGTTTATCATTTGAGTTCTTGGTGGGTCCCTACTGACCCATCAATCCTTTTGTCAGTACTGTTTGAGGAAAAATAAGAAGGGATAAGCACTCAAAACAACGTCAAATCCTTCTTTGCTTTTGGCTCAGTCCCTGTTCCAAGAGCTAGAAGACACCAGAGACCTGGTCCAAGGACCTGCAATTTCCATCTAAAGTTTGAAAATTTTGATTCTTCTTCCATATAAAGTCACCCCCTGTTGCGAGTTCTTCTTTCTAGTTCTTCCAGAGAAAGAAAAATGGACCTCCATGAGTGGGAAATCCTCTCTGATGATGGATTGCTTGATTACAAAGATGATGAGAAGAAGATCGTCTCGGCTAAGAGAAGTGCTTCTGCTTCTGATGCCAAGATTGTGTTTGACATGAACCATTTCTTGTGCCCGTCATCAATGGATTCTTCCAAGCACATCAGCCAACCACCGAGGAAGCCGATGATCCCTGTTCATCTTCAATTGGACTCGCCAATTCTCAAACTCCCTGATGATTCACTGGTAATGAAAGAGAAAGACAGGGTGCCTATGGTGATGATCGGTGTTGTGCCATCGGCCGTGAGTGAGAAGGAGAATCAGAAAGGAGCTGTGGAAGAAGCCGATCAAGACACTGTTACTCAAGTTTTCTTCAAGAAAATGAAGGAAAATGAATTCGTCGACATGAAAATAGACTCACCCAGATCCAGCAACAAGGGAACAAAGGCTCAGATTGATGTAGGGTGTTATCAGTTTGATGATGGGGGTGAGGCTAAAGAGAACATTACAAACTCCCCCAGAATGAATTTGATGAACCAGAAAAGCAACAAGGAGGATGGTGCCAAAGACGAGATGAATTGGGATGGATCCATCGGTGGGTTGAACATATTAAAGTGGAGCTTAAATGGGATTGGAGCCATCTGCTCCTTTGGTGTTGCAGCTGCCACTATTTGTATTCTGTTTTATGGAGGCAACCAACAAAAGCTGAGAATTCAGATCTACACCGACGATAAGAAATTAAAGCATGCAGTACAGCAAGCTACTAGATTAAATGAAGCAATGTCAGCAGCAAGAGGACTTCCACAAACAAGAGCTCACATAACCTGTGGTGGCCGCTATGATGGGCTCTAAGGAATCTAAGAGTTGGCTCTGCCTTGAAGACATACTCAAGGCTAGAGGAATAATTGAGGTGGATTTGCCAAAAAAATAAACCCAATTCTATCACTTTACTCAAAGTTTACCATGTCTGTAGATAGAGATTATAATTTGAAGTACAAAGAATAGGTTCAGGAGTCCTGCTAGGAGATTCCTACTGAGTATGCCAATAGTGTTGTTCAACTATGAATCTTATGGGTTTTTTATGGTTTTGTTGTGTGTTGTGGGTCAGAAGAAGTGGTACAATCTTTATACACATGAGACAGTGGAAATGAAGGAGATTATTTTAGAAGCATAAATCATAGTCTCAATCCTTAATGGTTAAAACACTATTTTTAGTCCATATACAATTAACTTTTCTGACGTGG ATGGACCTCCATGAGTGGGAAATCCTCTCTGATGATGGATTGCTTGATTACAAAGATGATGAGAAGAAGATCGTCTCGGCTAAGAGAAGTGCTTCTGCTTCTGATGCCAAGATTGTGTTTGACATGAACCATTTCTTGTGCCCGTCATCAATGGATTCTTCCAAGCACATCAGCCAACCACCGAGGAAGCCGATGATCCCTGTTCATCTTCAATTGGACTCGCCAATTCTCAAACTCCCTGATGATTCACTGGTAATGAAAGAGAAAGACAGGGTGCCTATGGTGATGATCGGTGTTGTGCCATCGGCCGTGAGTGAGAAGGAGAATCAGAAAGGAGCTGTGGAAGAAGCCGATCAAGACACTGTTACTCAAGTTTTCTTCAAGAAAATGAAGGAAAATGAATTCGTCGACATGAAAATAGACTCACCCAGATCCAGCAACAAGGGAACAAAGGCTCAGATTGATGTAGGGTGTTATCAGTTTGATGATGGGGGTGAGGCTAAAGAGAACATTACAAACTCCCCCAGAATGAATTTGATGAACCAGAAAAGCAACAAGGAGGATGGTGCCAAAGACGAGATGAATTGGGATGGATCCATCGGTGGGTTGAACATATTAAAGTGGAGCTTAAATGGGATTGGAGCCATCTGCTCCTTTGGTGTTGCAGCTGCCACTATTTGTATTCTGTTTTATGGAGGCAACCAACAAAAGCTGAGAATTCAGATCTACACCGACGATAAGAAATTAAAGCATGCAGTACAGCAAGCTACTAGATTAAATGAAGCAATGTCAGCAGCAAGAGGACTTCCACAAACAAGAGCTCACATAACCTGTGGTGGCCGCTATGATGGGCTCTAA MDLHEWEILSDDGLLDYKDDEKKIVSAKRSASASDAKIVFDMNHFLCPSSMDSSKHISQPPRKPMIPVHLQLDSPILKLPDDSLVMKEKDRVPMVMIGVVPSAVSEKENQKGAVEEADQDTVTQVFFKKMKENEFVDMKIDSPRSSNKGTKAQIDVGCYQFDDGGEAKENITNSPRMNLMNQKSNKEDGAKDEMNWDGSIGGLNILKWSLNGIGAICSFGVAAATICILFYGGNQQKLRIQIYTDDKKLKHAVQQATRLNEAMSAARGLPQTRAHITCGGRYDGL Homology
BLAST of Tan0003350 vs. NCBI nr
Match: XP_022966417.1 (uncharacterized protein LOC111466074 [Cucurbita maxima]) HSP 1 Score: 468.8 bits (1205), Expect = 3.4e-128 Identity = 241/292 (82.53%), Postives = 265/292 (90.75%), Query Frame = 0
BLAST of Tan0003350 vs. NCBI nr
Match: XP_022925002.1 (uncharacterized protein LOC111432380 [Cucurbita moschata]) HSP 1 Score: 465.3 bits (1196), Expect = 3.8e-127 Identity = 239/292 (81.85%), Postives = 265/292 (90.75%), Query Frame = 0
BLAST of Tan0003350 vs. NCBI nr
Match: KAG7027487.1 (hypothetical protein SDJN02_11500 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 465.3 bits (1196), Expect = 3.8e-127 Identity = 239/292 (81.85%), Postives = 265/292 (90.75%), Query Frame = 0
BLAST of Tan0003350 vs. NCBI nr
Match: XP_023518513.1 (uncharacterized protein LOC111781991 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 463.8 bits (1192), Expect = 1.1e-126 Identity = 238/292 (81.51%), Postives = 262/292 (89.73%), Query Frame = 0
BLAST of Tan0003350 vs. NCBI nr
Match: KAG6595501.1 (hypothetical protein SDJN03_12054, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 462.6 bits (1189), Expect = 2.4e-126 Identity = 238/292 (81.51%), Postives = 264/292 (90.41%), Query Frame = 0
BLAST of Tan0003350 vs. ExPASy TrEMBL
Match: A0A6J1HMX4 (uncharacterized protein LOC111466074 OS=Cucurbita maxima OX=3661 GN=LOC111466074 PE=4 SV=1) HSP 1 Score: 468.8 bits (1205), Expect = 1.6e-128 Identity = 241/292 (82.53%), Postives = 265/292 (90.75%), Query Frame = 0
BLAST of Tan0003350 vs. ExPASy TrEMBL
Match: A0A6J1EAL0 (uncharacterized protein LOC111432380 OS=Cucurbita moschata OX=3662 GN=LOC111432380 PE=4 SV=1) HSP 1 Score: 465.3 bits (1196), Expect = 1.8e-127 Identity = 239/292 (81.85%), Postives = 265/292 (90.75%), Query Frame = 0
BLAST of Tan0003350 vs. ExPASy TrEMBL
Match: A0A5A7UW91 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G00300 PE=4 SV=1) HSP 1 Score: 444.1 bits (1141), Expect = 4.3e-121 Identity = 243/294 (82.65%), Postives = 262/294 (89.12%), Query Frame = 0
BLAST of Tan0003350 vs. ExPASy TrEMBL
Match: A0A1S3B4M8 (uncharacterized protein LOC103485984 OS=Cucumis melo OX=3656 GN=LOC103485984 PE=4 SV=1) HSP 1 Score: 444.1 bits (1141), Expect = 4.3e-121 Identity = 243/294 (82.65%), Postives = 262/294 (89.12%), Query Frame = 0
BLAST of Tan0003350 vs. ExPASy TrEMBL
Match: A0A0A0L1C2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G192080 PE=4 SV=1) HSP 1 Score: 441.4 bits (1134), Expect = 2.8e-120 Identity = 240/293 (81.91%), Postives = 259/293 (88.40%), Query Frame = 0
BLAST of Tan0003350 vs. TAIR 10
Match: AT3G03870.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18130.1); Has 47 Blast hits to 47 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 121.3 bits (303), Expect = 1.2e-27 Identity = 103/304 (33.88%), Postives = 147/304 (48.36%), Query Frame = 0
BLAST of Tan0003350 vs. TAIR 10
Match: AT5G18130.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03870.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 118.6 bits (296), Expect = 8.0e-27 Identity = 108/316 (34.18%), Postives = 149/316 (47.15%), Query Frame = 0
BLAST of Tan0003350 vs. TAIR 10
Match: AT5G18130.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03870.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 88.6 bits (218), Expect = 8.9e-18 Identity = 90/281 (32.03%), Postives = 126/281 (44.84%), Query Frame = 0
BLAST of Tan0003350 vs. TAIR 10
Match: AT3G03870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18130.1); Has 41 Blast hits to 41 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 87.8 bits (216), Expect = 1.5e-17 Identity = 84/267 (31.46%), Postives = 122/267 (45.69%), Query Frame = 0
BLAST of Tan0003350 vs. TAIR 10
Match: AT4G10080.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13530.1); Has 120 Blast hits to 114 proteins in 21 species: Archae - 2; Bacteria - 4; Metazoa - 0; Fungi - 12; Plants - 100; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 42.4 bits (98), Expect = 7.3e-04 Identity = 25/85 (29.41%), Postives = 42/85 (49.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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