Tan0002824 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGGTGGGAAGGACAAGGACACTGATGACAAAGGCATGTTTTCACATATGGCGGCGTTTGCTGCAGGGGCGCACCACCATGCTCATCCTCATGGATATCCACCGCCGCCATATGGATATCCCCCTCCGGGAGGGTACCCTCCGGCTGGATATCCCCCACCCGCCGGGTATCCTCCGGCTTGCTATCCTCCTCACGGTGGACACCCTCATACAGCCTATCCATATCATGGCGGATACCCTCCCTCAGGCTATCCTGGCCACCATCATTACCCTGGTATTATCTCATTCTATTGTTTGGTTTGATGACTTAGAATTTTCGAATTAGGAAGAAGAACGGCCTCAATATTATATTAGAAAAATTAAAATTTCTCTTAATCGTAGTTTGGACTTTCTTTAGTTCAACAATATTAGGGGTAAAGATTCAAATCTTTGACCTCTCCATCTAAATATTAGGGATGAGAATTCGAATCTTTGACCTCTCTATCGAGAATACACATTAATAATCGTTGAACTATGCTCGCTTTAATGAGCCTTTTAAATTTTTAGCATTAGAAGATTGTATATATAGAAAGTCAGAATGTGAAAATTCTTTACATTCAAACTCACTTGTTTATCATCTTCTGAAACGGGTCTTGGGGTGGGCAAAACATCTTAAATTTGAGTGGATGTTTGGTATAATATAAGAACCATATTACAAGACTTTCAACAGTTTAATCATTCAAAAAAAAAAAAAAAATCCTGTTGCTAACTAGTTTATTAGTATTATACTTGTTTCTTGGACCTGATGAGCCTCGAAGAAAATTTTTAGTGCTATGAGAGTATCATATTCTGTTCACTCTACGACTTTAAGTTTATAAATAGTTTTTTAATGCTAGTGAGGTGAACCCCACATGATTGTCAAAAGGAAAAATTTTCATATTAAGGTAATACTAGATTTTTCCTCCGCGTTGCCATGTAGAAAGAGTTGGGAAGGTAGTTGTTCTTATGACAAATTTAAACCATGGATTTGGATCATCATCATGATTTGTGTTTTCAGGCCATGGACACGGCATGGGGGGATTGTTGGCTGGTGGAGCAGCTGCTGCAGCCGCTGCATACGGTGCTCATCATCTTGTTCATGCACGCCCATTTGGCTATGGTCATCACGGAAAGTTCAAACATGGGAAATTTGGCAAGCGTTGGAAGCATCATGGAGGCAAGTTCAAGAAATGGAAGTGA ATGGGAGGTGGGAAGGACAAGGACACTGATGACAAAGGCATGTTTTCACATATGGCGGCGTTTGCTGCAGGGGCGCACCACCATGCTCATCCTCATGGATATCCACCGCCGCCATATGGATATCCCCCTCCGGGAGGGTACCCTCCGGCTGGATATCCCCCACCCGCCGGGTATCCTCCGGCTTGCTATCCTCCTCACGGTGGACACCCTCATACAGCCTATCCATATCATGGCGGATACCCTCCCTCAGGCTATCCTGGCCACCATCATTACCCTGGCCATGGACACGGCATGGGGGGATTGTTGGCTGGTGGAGCAGCTGCTGCAGCCGCTGCATACGGTGCTCATCATCTTGTTCATGCACGCCCATTTGGCTATGGTCATCACGGAAAGTTCAAACATGGGAAATTTGGCAAGCGTTGGAAGCATCATGGAGGCAAGTTCAAGAAATGGAAGTGA ATGGGAGGTGGGAAGGACAAGGACACTGATGACAAAGGCATGTTTTCACATATGGCGGCGTTTGCTGCAGGGGCGCACCACCATGCTCATCCTCATGGATATCCACCGCCGCCATATGGATATCCCCCTCCGGGAGGGTACCCTCCGGCTGGATATCCCCCACCCGCCGGGTATCCTCCGGCTTGCTATCCTCCTCACGGTGGACACCCTCATACAGCCTATCCATATCATGGCGGATACCCTCCCTCAGGCTATCCTGGCCACCATCATTACCCTGGCCATGGACACGGCATGGGGGGATTGTTGGCTGGTGGAGCAGCTGCTGCAGCCGCTGCATACGGTGCTCATCATCTTGTTCATGCACGCCCATTTGGCTATGGTCATCACGGAAAGTTCAAACATGGGAAATTTGGCAAGCGTTGGAAGCATCATGGAGGCAAGTTCAAGAAATGGAAGTGA MGGGKDKDTDDKGMFSHMAAFAAGAHHHAHPHGYPPPPYGYPPPGGYPPAGYPPPAGYPPACYPPHGGHPHTAYPYHGGYPPSGYPGHHHYPGHGHGMGGLLAGGAAAAAAAYGAHHLVHARPFGYGHHGKFKHGKFGKRWKHHGGKFKKWK Homology
BLAST of Tan0002824 vs. ExPASy Swiss-Prot
Match: P37705 (Glycine-rich protein A3 OS=Daucus carota OX=4039 PE=2 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 3.2e-19 Identity = 76/153 (49.67%), Postives = 88/153 (57.52%), Query Frame = 0
BLAST of Tan0002824 vs. NCBI nr
Match: XP_022147022.1 (glycine-rich protein A3 [Momordica charantia]) HSP 1 Score: 234.6 bits (597), Expect = 5.8e-58 Identity = 125/163 (76.69%), Postives = 138/163 (84.66%), Query Frame = 0
BLAST of Tan0002824 vs. NCBI nr
Match: XP_008438206.1 (PREDICTED: glycine-rich protein A3 [Cucumis melo]) HSP 1 Score: 224.2 bits (570), Expect = 7.8e-55 Identity = 124/161 (77.02%), Postives = 134/161 (83.23%), Query Frame = 0
BLAST of Tan0002824 vs. NCBI nr
Match: XP_022980434.1 (glycine-rich protein A3-like [Cucurbita maxima] >XP_022980435.1 glycine-rich protein A3-like [Cucurbita maxima]) HSP 1 Score: 219.9 bits (559), Expect = 1.5e-53 Identity = 124/170 (72.94%), Postives = 135/170 (79.41%), Query Frame = 0
BLAST of Tan0002824 vs. NCBI nr
Match: XP_004133933.1 (glycine-rich protein A3 [Cucumis sativus] >XP_004133934.1 glycine-rich protein A3 [Cucumis sativus] >KGN56623.1 hypothetical protein Csa_010139 [Cucumis sativus]) HSP 1 Score: 216.9 bits (551), Expect = 1.2e-52 Identity = 121/165 (73.33%), Postives = 131/165 (79.39%), Query Frame = 0
BLAST of Tan0002824 vs. NCBI nr
Match: KAG6582545.1 (hypothetical protein SDJN03_22547, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 216.5 bits (550), Expect = 1.6e-52 Identity = 123/170 (72.35%), Postives = 134/170 (78.82%), Query Frame = 0
BLAST of Tan0002824 vs. ExPASy TrEMBL
Match: A0A6J1D180 (glycine-rich protein A3 OS=Momordica charantia OX=3673 GN=LOC111016059 PE=4 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 2.8e-58 Identity = 125/163 (76.69%), Postives = 138/163 (84.66%), Query Frame = 0
BLAST of Tan0002824 vs. ExPASy TrEMBL
Match: A0A1S3AWG9 (glycine-rich protein A3 OS=Cucumis melo OX=3656 GN=LOC103483379 PE=4 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 3.8e-55 Identity = 124/161 (77.02%), Postives = 134/161 (83.23%), Query Frame = 0
BLAST of Tan0002824 vs. ExPASy TrEMBL
Match: A0A6J1IZ97 (glycine-rich protein A3-like OS=Cucurbita maxima OX=3661 GN=LOC111479802 PE=4 SV=1) HSP 1 Score: 219.9 bits (559), Expect = 7.1e-54 Identity = 124/170 (72.94%), Postives = 135/170 (79.41%), Query Frame = 0
BLAST of Tan0002824 vs. ExPASy TrEMBL
Match: A0A0A0L4F2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126870 PE=4 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 6.0e-53 Identity = 121/165 (73.33%), Postives = 131/165 (79.39%), Query Frame = 0
BLAST of Tan0002824 vs. ExPASy TrEMBL
Match: A0A6J1E983 (glycine-rich protein A3-like OS=Cucurbita moschata OX=3662 GN=LOC111431848 PE=4 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 2.3e-52 Identity = 122/170 (71.76%), Postives = 133/170 (78.24%), Query Frame = 0
BLAST of Tan0002824 vs. TAIR 10
Match: AT4G19200.1 (proline-rich family protein ) HSP 1 Score: 112.8 bits (281), Expect = 2.4e-25 Identity = 91/187 (48.66%), Postives = 103/187 (55.08%), Query Frame = 0
BLAST of Tan0002824 vs. TAIR 10
Match: AT5G45350.1 (proline-rich family protein ) HSP 1 Score: 104.4 bits (259), Expect = 8.4e-23 Identity = 92/204 (45.10%), Postives = 103/204 (50.49%), Query Frame = 0
BLAST of Tan0002824 vs. TAIR 10
Match: AT5G45350.2 (proline-rich family protein ) HSP 1 Score: 104.4 bits (259), Expect = 8.4e-23 Identity = 92/204 (45.10%), Postives = 103/204 (50.49%), Query Frame = 0
BLAST of Tan0002824 vs. TAIR 10
Match: AT1G31750.1 (proline-rich family protein ) HSP 1 Score: 99.8 bits (247), Expect = 2.1e-21 Identity = 83/163 (50.92%), Postives = 92/163 (56.44%), Query Frame = 0
BLAST of Tan0002824 vs. TAIR 10
Match: AT5G17650.1 (glycine/proline-rich protein ) HSP 1 Score: 99.8 bits (247), Expect = 2.1e-21 Identity = 83/181 (45.86%), Postives = 96/181 (53.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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