Tan0002529 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCCCAAACAAAAATCCAAAAAAGAAAGTGACAAGAAAAAGGAAAGAAGTTAGCAGTGGAGGAGGGATCCCCTCTCCAATGGCGGAAAACTCTGCAGCAAAATGGGAAGGGCGAGTTTCAGAGGCGTTAACAGTCGCCGCCGCGGACCAGATATGGCCGATGCTCAAGGACTTCTTCAATTTCCACAAATGGTTTCCAACCCTAGCCAATTGCTACGGACTTTCAGGCACGAACGGCGAGGTCGGCTGCGTGCGATTCTGCTCCGGCTTCTCGATTCCGTCCACCGGCGGCTCCGATCGCGTCGTTAGCTGGTCCAAAGAACGGCTGGTGGCGGTGGACGAGGAGCGCCGCCGCATATGCTACGAGATCGTGGATAGCAACATCGGATTCAAATCGTACTTGTCGGCGATCGAGGTCGCTCAGGAAGTAGACGGCGGCGGCGGAGTGATTGAATGGAGTTTCGCGGTTGAGCCGGTGGAAGGTTTGAAGCTGGAGGATCTGGTGAAGAAGTTCGAAGAGGGATTGAGGTCCATGGCCAGGCGAATGGAGGCTGCGGTGGAAAATAATTAAGAAATTACAATTCACAGTGTTTTTTTTGGTTCAAATCCACCCGGAGATTCAAATATCTAACATGTATATTATGAATTTATAATAATGGTGTTG GCCCAAACAAAAATCCAAAAAAGAAAGTGACAAGAAAAAGGAAAGAAGTTAGCAGTGGAGGAGGGATCCCCTCTCCAATGGCGGAAAACTCTGCAGCAAAATGGGAAGGGCGAGTTTCAGAGGCGTTAACAGTCGCCGCCGCGGACCAGATATGGCCGATGCTCAAGGACTTCTTCAATTTCCACAAATGGTTTCCAACCCTAGCCAATTGCTACGGACTTTCAGGCACGAACGGCGAGGTCGGCTGCGTGCGATTCTGCTCCGGCTTCTCGATTCCGTCCACCGGCGGCTCCGATCGCGTCGTTAGCTGGTCCAAAGAACGGCTGGTGGCGGTGGACGAGGAGCGCCGCCGCATATGCTACGAGATCGTGGATAGCAACATCGGATTCAAATCGTACTTGTCGGCGATCGAGGTCGCTCAGGAAGTAGACGGCGGCGGCGGAGTGATTGAATGGAGTTTCGCGGTTGAGCCGGTGGAAGGTTTGAAGCTGGAGGATCTGGTGAAGAAGTTCGAAGAGGGATTGAGGTCCATGGCCAGGCGAATGGAGGCTGCGGTGGAAAATAATTAAGAAATTACAATTCACAGTGTTTTTTTTGGTTCAAATCCACCCGGAGATTCAAATATCTAACATGTATATTATGAATTTATAATAATGGTGTTG ATGGCGGAAAACTCTGCAGCAAAATGGGAAGGGCGAGTTTCAGAGGCGTTAACAGTCGCCGCCGCGGACCAGATATGGCCGATGCTCAAGGACTTCTTCAATTTCCACAAATGGTTTCCAACCCTAGCCAATTGCTACGGACTTTCAGGCACGAACGGCGAGGTCGGCTGCGTGCGATTCTGCTCCGGCTTCTCGATTCCGTCCACCGGCGGCTCCGATCGCGTCGTTAGCTGGTCCAAAGAACGGCTGGTGGCGGTGGACGAGGAGCGCCGCCGCATATGCTACGAGATCGTGGATAGCAACATCGGATTCAAATCGTACTTGTCGGCGATCGAGGTCGCTCAGGAAGTAGACGGCGGCGGCGGAGTGATTGAATGGAGTTTCGCGGTTGAGCCGGTGGAAGGTTTGAAGCTGGAGGATCTGGTGAAGAAGTTCGAAGAGGGATTGAGGTCCATGGCCAGGCGAATGGAGGCTGCGGTGGAAAATAATTAA MAENSAAKWEGRVSEALTVAAADQIWPMLKDFFNFHKWFPTLANCYGLSGTNGEVGCVRFCSGFSIPSTGGSDRVVSWSKERLVAVDEERRRICYEIVDSNIGFKSYLSAIEVAQEVDGGGGVIEWSFAVEPVEGLKLEDLVKKFEEGLRSMARRMEAAVENN Homology
BLAST of Tan0002529 vs. ExPASy Swiss-Prot
Match: P59082 (Lachrymatory-factor synthase OS=Allium cepa OX=4679 GN=LFS PE=1 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 7.2e-17 Identity = 43/133 (32.33%), Postives = 67/133 (50.38%), Query Frame = 0
BLAST of Tan0002529 vs. NCBI nr
Match: KAG6585381.1 (Lachrymatory-factor synthase, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020297.1 Lachrymatory-factor synthase, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 281.6 bits (719), Expect = 4.4e-72 Identity = 140/163 (85.89%), Postives = 145/163 (88.96%), Query Frame = 0
BLAST of Tan0002529 vs. NCBI nr
Match: XP_023537781.1 (lachrymatory-factor synthase [Cucurbita pepo subsp. pepo]) HSP 1 Score: 280.4 bits (716), Expect = 9.8e-72 Identity = 139/161 (86.34%), Postives = 145/161 (90.06%), Query Frame = 0
BLAST of Tan0002529 vs. NCBI nr
Match: XP_022951556.1 (lachrymatory-factor synthase [Cucurbita moschata]) HSP 1 Score: 278.9 bits (712), Expect = 2.9e-71 Identity = 139/163 (85.28%), Postives = 144/163 (88.34%), Query Frame = 0
BLAST of Tan0002529 vs. NCBI nr
Match: XP_023002531.1 (lachrymatory-factor synthase-like [Cucurbita maxima]) HSP 1 Score: 278.5 bits (711), Expect = 3.7e-71 Identity = 137/163 (84.05%), Postives = 144/163 (88.34%), Query Frame = 0
BLAST of Tan0002529 vs. NCBI nr
Match: XP_022131917.1 (lachrymatory-factor synthase [Momordica charantia]) HSP 1 Score: 274.2 bits (700), Expect = 7.0e-70 Identity = 132/161 (81.99%), Postives = 146/161 (90.68%), Query Frame = 0
BLAST of Tan0002529 vs. ExPASy TrEMBL
Match: A0A6J1GHW7 (lachrymatory-factor synthase OS=Cucurbita moschata OX=3662 GN=LOC111454336 PE=3 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 1.4e-71 Identity = 139/163 (85.28%), Postives = 144/163 (88.34%), Query Frame = 0
BLAST of Tan0002529 vs. ExPASy TrEMBL
Match: A0A6J1KLK1 (lachrymatory-factor synthase-like OS=Cucurbita maxima OX=3661 GN=LOC111496344 PE=3 SV=1) HSP 1 Score: 278.5 bits (711), Expect = 1.8e-71 Identity = 137/163 (84.05%), Postives = 144/163 (88.34%), Query Frame = 0
BLAST of Tan0002529 vs. ExPASy TrEMBL
Match: A0A6J1BSC0 (lachrymatory-factor synthase OS=Momordica charantia OX=3673 GN=LOC111004938 PE=3 SV=1) HSP 1 Score: 274.2 bits (700), Expect = 3.4e-70 Identity = 132/161 (81.99%), Postives = 146/161 (90.68%), Query Frame = 0
BLAST of Tan0002529 vs. ExPASy TrEMBL
Match: A0A0A0LPR8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G373500 PE=3 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 3.0e-66 Identity = 128/158 (81.01%), Postives = 136/158 (86.08%), Query Frame = 0
BLAST of Tan0002529 vs. ExPASy TrEMBL
Match: A0A5A7VFE2 (Lachrymatory-factor synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003740 PE=3 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 6.2e-64 Identity = 128/162 (79.01%), Postives = 139/162 (85.80%), Query Frame = 0
BLAST of Tan0002529 vs. TAIR 10
Match: AT2G25770.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein ) HSP 1 Score: 173.7 bits (439), Expect = 1.2e-43 Identity = 84/154 (54.55%), Postives = 107/154 (69.48%), Query Frame = 0
BLAST of Tan0002529 vs. TAIR 10
Match: AT2G25770.2 (Polyketide cyclase/dehydrase and lipid transport superfamily protein ) HSP 1 Score: 173.7 bits (439), Expect = 1.2e-43 Identity = 84/154 (54.55%), Postives = 107/154 (69.48%), Query Frame = 0
BLAST of Tan0002529 vs. TAIR 10
Match: AT4G32870.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein ) HSP 1 Score: 119.4 bits (298), Expect = 2.7e-27 Identity = 60/157 (38.22%), Postives = 94/157 (59.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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