Tan0002500 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAATGAGCATCTCCGATACGGAAGCCGTATCCAACGGCCAACCCGAGCCGGAGTTTTACCAAAACGTCGTCGTTATGCGTCACGGCGACCGTTTCGACAACTTCGACCGGTCATGGACGGCCACCGCCGCCCGCCCATGGGACCCGCCTCTTTACAAGGACGGCCTGGTTCGGGCCTTCGATACAGGTCGGACTTTCCTCGACCTTCTCGACTTCCCTTTTCACCGGGTTTTCGTTTCCCCTTTCCTCCGCTGCGTTCAGACCGCCGCCCAAGTCGTCCAAGCCCTCTCCGCCGCTAACGGCGGCGCCGAAGGCAGCCCTTCCACTCTTAAGGTCAGGCTAATTTCATGATACGCATAAAACCATGATCACGTCTTTTTTTTTTTTTTTTAATTTTGCGTGTGGGTTGTTTCTTATTGAAAATTAATATCTTCTTCCTTATGTCAGCGTTGACTTTTAATTCTCATCTATTCCAAATTTATGGTTCTAGAATTTACATTAGTTTCGTGAATTTTTACTGGGTTCTGAGTGTTTGTTTGAGGGATTTTGATGGGTCGATTTCATTTGACATTTTCGGACATATATTGAGATAGAGATGGGTATGTCCGGTTCATGTCGGAAATGTGTTAATAATTAATACTAATATATTCGAATAACTAAGTTTGAAGTTGAAGGCCACCAAAAAGGAAGTACTTCGATTTGGAATTGGGTGATAATGAAGTGGTTTTGAAGGCCACCAAAACCAAAAGTCTTCTATCTTTTTGTTCATTTCTAAATTAACATATCTCTGAATTTTCTTTTATCTTGTCCTTTTCCTGTCCTCTCTTTTCGCCGGCAGCTGCCACTTTCTTAACCATTGAATAATTTGATATAAAATTGTCCGGTCACATTGTTGCAAATGAATTTTAAATTTCAAGTCTAATTGAGTTTTGGGCTCAAAACAGACGTATTGAGTAAAAAATCGAGAATACTTAATCCCTTTGATAACCATTTGATTTTTAGTTTTTAGTTTTTGAAAATTAAGCCTATAAATACTACTTCCATTTGTGATTTTCATGTTTTCTTATCTACTTTTTAGACTTTTTTCTTCAAAATCAAGCTAAATTTTGAAAACTAAAAACAGTAGTTTCCAAAAACTTGTTTTTGTTTTTGAAATCTAGCTAATAATTCAAGTATTTTCTTAAAAAATGTGGGAACCGTTGTAGGAAAGATGAAGACGATTGTAGGAAAATGGTGAGAAAACAACTATAATTTTCAAAAACTAAAAACCCAAAATCAAATAGTTATCAAACGGGCCTTAGTGTTTGGAATGATATTTCAAGTGCTTACAAACTCTTTTTACTTGAAAAGTCATTCCAAACCGGATTTGCGGTAAAAAAAACCTTCATGGTTTAGTTTTTGGTGAGGTAAAAAACCAACTGGGATCGCCCACAATACAAATAGTACTTGACATTGACAGATGAAGGTGACATCTCATTTGTTATACGTTTACTATAGCCTGCAGTGTTGTTTGAAAAAGGTGTTGAAAAGTTCTTCTCAACTTTTCAAAACAAAGATTTGTTCTTAGGTACTGAAATTTTCATTTCAATAATTGCTGCTTCACATGATGTTTCTAACTGTTTAGCTTTTGAATGGTAAAAGTTCTTTTGTGTTCTGTTCAAGGAGTTTAAAAGTCAAATTAGGTTGTTGCCTTGAGATTAGTTTCACTTTTTCTCTCTTAAATGAGTGTTGAAGTGAGAAATAATTGGAAACTGGAAAATAAAAAGTCTTCACTTGCTTTCATTTTCTTACAAATGATCTTAACATTATGACAAGTCTTCAGCTGAAAAGTATGGCTTTGAAGTTTGAAAAGAGGATTGAGAATTATTTGGCCTTCCCTTCCCAATAACTCATTGGGGCTCAAGTCTCTTTCTGAACAGTTTTTCATGCAAATGCTGAATTTTGACTTGGGATACTACTGTAGGTTTCTATAGAGTATGGACTGTGTGAGATGCTAACCAATGAAGCAATCAGACCTAATGTTGCTCCAAAGGATAGGAACTGGGATTTCAATATTCCTCAGCTTGAAGCCATTTTGCCTGTCGGCACCGTTGACCATTCTATAGAACGTGTATATAAAGAGGTATGTAAACGAAAACGAAATCGTTATCAAATGAAACTTCAATGGATCTACTTAAAAGTAAATGTTGCTTCTTAAAAACTTCAGATGCTTCCATGGGAAGGGTCAGCAGCGGTTACTCATCGACGGTACGTGCAACTGTTCCATACACTTGCCGATAAATACCCGTCAGAGAACTTGCTTCTTGTCACACATGGTAAGTAGTATTTTCAGTTGCTGCCATATCTTGTCCCCGTGGTTTGCCCTTAAGATGTTGTTTGTTCCTCGGTCTGTTTTCAGGCGAGGGGGTCGGAGTTGCGGTTTCTACATTTATGGAAGATGTACTAGTTTACGGAGTTGAGTATTGTGCATTTGTTCAACTGCGAAGGCCTGTTTTTCGGAGAGGTGATTCGTTTGTGTTCGGAAAATTCGAGGTGAAACTAAGAACTGATGGGCAAGATGGAATCAAACACATGCCAAAGCAAGAAAAAGAATGAGAACATATCTTTCATTGGCAATAAACAGCCAGACTCTCTATTATTTGCTTCTGCTTTGATTCTGTGATGCATTGGATATTATCAAGATCTCTCTTTTTTTTGGTTTTCTTTGAATAAATGAGTCTGGAATCTTGATATTGTTTTAGAAAGTGATGAATACAATACTGATTATTGTTAAGGAGAGAAAAAATGAAAGTGATGTGAAGTCTAACCAATGTCACATTTTAATATATTATTACATGTATTCCTTATAAGGGTCCCCTCCCCTCAGCCCTACTGTTGTTGTTTTGCTTTCTATCAGATTGCTTATACTAAGATTGGTTTTCAGAAA CAAAATGAGCATCTCCGATACGGAAGCCGTATCCAACGGCCAACCCGAGCCGGAGTTTTACCAAAACGTCGTCGTTATGCGTCACGGCGACCGTTTCGACAACTTCGACCGGTCATGGACGGCCACCGCCGCCCGCCCATGGGACCCGCCTCTTTACAAGGACGGCCTGGTTCGGGCCTTCGATACAGGTCGGACTTTCCTCGACCTTCTCGACTTCCCTTTTCACCGGGTTTTCGTTTCCCCTTTCCTCCGCTGCGTTCAGACCGCCGCCCAAGTCGTCCAAGCCCTCTCCGCCGCTAACGGCGGCGCCGAAGGCAGCCCTTCCACTCTTAAGGTTTCTATAGAGTATGGACTGTGTGAGATGCTAACCAATGAAGCAATCAGACCTAATGTTGCTCCAAAGGATAGGAACTGGGATTTCAATATTCCTCAGCTTGAAGCCATTTTGCCTGTCGGCACCGTTGACCATTCTATAGAACGTGTATATAAAGAGATGCTTCCATGGGAAGGGTCAGCAGCGGTTACTCATCGACGGTACGTGCAACTGTTCCATACACTTGCCGATAAATACCCGTCAGAGAACTTGCTTCTTGTCACACATGGCGAGGGGGTCGGAGTTGCGGTTTCTACATTTATGGAAGATGTACTAGTTTACGGAGTTGAGTATTGTGCATTTGTTCAACTGCGAAGGCCTGTTTTTCGGAGAGGTGATTCGTTTGTGTTCGGAAAATTCGAGGTGAAACTAAGAACTGATGGGCAAGATGGAATCAAACACATGCCAAAGCAAGAAAAAGAATGAGAACATATCTTTCATTGGCAATAAACAGCCAGACTCTCTATTATTTGCTTCTGCTTTGATTCTGTGATGCATTGGATATTATCAAGATCTCTCTTTTTTTTGGTTTTCTTTGAATAAATGAGTCTGGAATCTTGATATTGTTTTAGAAAGTGATGAATACAATACTGATTATTGTTAAGGAGAGAAAAAATGAAAGTGATGTGAAGTCTAACCAATGTCACATTTTAATATATTATTACATGTATTCCTTATAAGGGTCCCCTCCCCTCAGCCCTACTGTTGTTGTTTTGCTTTCTATCAGATTGCTTATACTAAGATTGGTTTTCAGAAA ATGAGCATCTCCGATACGGAAGCCGTATCCAACGGCCAACCCGAGCCGGAGTTTTACCAAAACGTCGTCGTTATGCGTCACGGCGACCGTTTCGACAACTTCGACCGGTCATGGACGGCCACCGCCGCCCGCCCATGGGACCCGCCTCTTTACAAGGACGGCCTGGTTCGGGCCTTCGATACAGGTCGGACTTTCCTCGACCTTCTCGACTTCCCTTTTCACCGGGTTTTCGTTTCCCCTTTCCTCCGCTGCGTTCAGACCGCCGCCCAAGTCGTCCAAGCCCTCTCCGCCGCTAACGGCGGCGCCGAAGGCAGCCCTTCCACTCTTAAGGTTTCTATAGAGTATGGACTGTGTGAGATGCTAACCAATGAAGCAATCAGACCTAATGTTGCTCCAAAGGATAGGAACTGGGATTTCAATATTCCTCAGCTTGAAGCCATTTTGCCTGTCGGCACCGTTGACCATTCTATAGAACGTGTATATAAAGAGATGCTTCCATGGGAAGGGTCAGCAGCGGTTACTCATCGACGGTACGTGCAACTGTTCCATACACTTGCCGATAAATACCCGTCAGAGAACTTGCTTCTTGTCACACATGGCGAGGGGGTCGGAGTTGCGGTTTCTACATTTATGGAAGATGTACTAGTTTACGGAGTTGAGTATTGTGCATTTGTTCAACTGCGAAGGCCTGTTTTTCGGAGAGGTGATTCGTTTGTGTTCGGAAAATTCGAGGTGAAACTAAGAACTGATGGGCAAGATGGAATCAAACACATGCCAAAGCAAGAAAAAGAATGA MSISDTEAVSNGQPEPEFYQNVVVMRHGDRFDNFDRSWTATAARPWDPPLYKDGLVRAFDTGRTFLDLLDFPFHRVFVSPFLRCVQTAAQVVQALSAANGGAEGSPSTLKVSIEYGLCEMLTNEAIRPNVAPKDRNWDFNIPQLEAILPVGTVDHSIERVYKEMLPWEGSAAVTHRRYVQLFHTLADKYPSENLLLVTHGEGVGVAVSTFMEDVLVYGVEYCAFVQLRRPVFRRGDSFVFGKFEVKLRTDGQDGIKHMPKQEKE Homology
BLAST of Tan0002500 vs. ExPASy Swiss-Prot
Match: Q3V3E1 (Ubiquitin-associated and SH3 domain-containing protein A OS=Mus musculus OX=10090 GN=Ubash3a PE=1 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 7.8e-05 Identity = 49/178 (27.53%), Postives = 76/178 (42.70%), Query Frame = 0
BLAST of Tan0002500 vs. NCBI nr
Match: KAG6597036.1 (hypothetical protein SDJN03_10216, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028513.1 hypothetical protein SDJN02_09694 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 487.3 bits (1253), Expect = 8.6e-134 Identity = 236/265 (89.06%), Postives = 249/265 (93.96%), Query Frame = 0
BLAST of Tan0002500 vs. NCBI nr
Match: XP_022944754.1 (uncharacterized protein LOC111449111 [Cucurbita moschata]) HSP 1 Score: 486.1 bits (1250), Expect = 1.9e-133 Identity = 235/265 (88.68%), Postives = 249/265 (93.96%), Query Frame = 0
BLAST of Tan0002500 vs. NCBI nr
Match: XP_023540071.1 (uncharacterized protein LOC111800554 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 486.1 bits (1250), Expect = 1.9e-133 Identity = 236/265 (89.06%), Postives = 248/265 (93.58%), Query Frame = 0
BLAST of Tan0002500 vs. NCBI nr
Match: XP_022975437.1 (ubiquitin-associated and SH3 domain-containing protein A-like [Cucurbita maxima] >XP_022975446.1 ubiquitin-associated and SH3 domain-containing protein A-like [Cucurbita maxima]) HSP 1 Score: 481.1 bits (1237), Expect = 6.1e-132 Identity = 234/265 (88.30%), Postives = 247/265 (93.21%), Query Frame = 0
BLAST of Tan0002500 vs. NCBI nr
Match: XP_038882205.1 (uncharacterized protein LOC120073424 [Benincasa hispida]) HSP 1 Score: 441.0 bits (1133), Expect = 7.0e-120 Identity = 213/258 (82.56%), Postives = 232/258 (89.92%), Query Frame = 0
BLAST of Tan0002500 vs. ExPASy TrEMBL
Match: A0A6J1FYZ4 (uncharacterized protein LOC111449111 OS=Cucurbita moschata OX=3662 GN=LOC111449111 PE=4 SV=1) HSP 1 Score: 486.1 bits (1250), Expect = 9.2e-134 Identity = 235/265 (88.68%), Postives = 249/265 (93.96%), Query Frame = 0
BLAST of Tan0002500 vs. ExPASy TrEMBL
Match: A0A6J1IE93 (ubiquitin-associated and SH3 domain-containing protein A-like OS=Cucurbita maxima OX=3661 GN=LOC111474791 PE=4 SV=1) HSP 1 Score: 481.1 bits (1237), Expect = 3.0e-132 Identity = 234/265 (88.30%), Postives = 247/265 (93.21%), Query Frame = 0
BLAST of Tan0002500 vs. ExPASy TrEMBL
Match: A0A5A7U5U0 (Phosphoglycerate mutase family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G00520 PE=4 SV=1) HSP 1 Score: 436.0 bits (1120), Expect = 1.1e-118 Identity = 214/259 (82.63%), Postives = 233/259 (89.96%), Query Frame = 0
BLAST of Tan0002500 vs. ExPASy TrEMBL
Match: A0A1S3AV13 (uncharacterized protein LOC103483134 OS=Cucumis melo OX=3656 GN=LOC103483134 PE=4 SV=1) HSP 1 Score: 436.0 bits (1120), Expect = 1.1e-118 Identity = 214/259 (82.63%), Postives = 233/259 (89.96%), Query Frame = 0
BLAST of Tan0002500 vs. ExPASy TrEMBL
Match: A0A0A0L5Q1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118040 PE=4 SV=1) HSP 1 Score: 429.1 bits (1102), Expect = 1.3e-116 Identity = 207/258 (80.23%), Postives = 229/258 (88.76%), Query Frame = 0
BLAST of Tan0002500 vs. TAIR 10
Match: AT3G60450.1 (Phosphoglycerate mutase family protein ) HSP 1 Score: 268.5 bits (685), Expect = 5.8e-72 Identity = 133/247 (53.85%), Postives = 164/247 (66.40%), Query Frame = 0
BLAST of Tan0002500 vs. TAIR 10
Match: AT3G60440.1 (Phosphoglycerate mutase family protein ) HSP 1 Score: 259.6 bits (662), Expect = 2.7e-69 Identity = 134/251 (53.39%), Postives = 167/251 (66.53%), Query Frame = 0
BLAST of Tan0002500 vs. TAIR 10
Match: AT3G60420.3 (Phosphoglycerate mutase family protein ) HSP 1 Score: 245.4 bits (625), Expect = 5.3e-65 Identity = 125/243 (51.44%), Postives = 162/243 (66.67%), Query Frame = 0
BLAST of Tan0002500 vs. TAIR 10
Match: AT3G60420.1 (Phosphoglycerate mutase family protein ) HSP 1 Score: 227.3 bits (578), Expect = 1.5e-59 Identity = 120/236 (50.85%), Postives = 150/236 (63.56%), Query Frame = 0
BLAST of Tan0002500 vs. TAIR 10
Match: AT3G60420.2 (Phosphoglycerate mutase family protein ) HSP 1 Score: 209.5 bits (532), Expect = 3.2e-54 Identity = 131/342 (38.30%), Postives = 166/342 (48.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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