Tan0002291 (gene) Snake gourd v1

Overview


Name	Tan0002291
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Rad60-SLD domain-containing protein
Location	LG04: 6844571 .. 6847031 (-)
RNA-Seq Expression	Tan0002291
Synteny	Tan0002291

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAGGTCTCGCTAGGTAACGCTTCGACGGGAAACGGACAGTCAATTTGAATTTTCCGGCCGGATACGAAGAAGATTTATCGGAGAAGAAGAAGAAGAGTTAAGATTTCGAGGTCTTTGACAATGGCGAGTCTCTTTCTCTCTTTAATTTCATGGGCACGGAATTCTTCTACTCAAGGTTTCCCCTTCTCACTTCGTGATTCTTACTTTGAGTTCTTATTTTCAGGCGGATTCCGTTGAAGAATTTGAGCCCTTGTTCGATTACAGCCGCGTTCAGCCTCGCTCCGTTGTTTGTCTTGATGGTAATAGTTCTCAAGCATGGAGGATTTTGGAATTTCATGAAAGTCGGAATTTTCTATTTCATTGTGTTTGAAGTATTTGTAATTCCCGCTAGACTGAGTTTCCTTGTGCTCATGGTTGGTAACTTGGTGCTTTATTTTCTTCCGTTTGGATTAAAATCAGACGAGGATTCGGACGCAGACGTGTCTCGGGAACCTTTTCTGAAGCGAGCGAAGATTTCAAATTCGGCGGTATATAATTCCCTTCATGTAGTAAAATAGTGGACTTTCCGTTTGCATAAGATTAATGTTCGTTGGAATAGTCAGTAAAGCTAGTTTATGTGATTATTTCCTTTCAAACAATATTTAGGTTACGAATTTGGTGGACAATTCAGTTGTTGAAGATAAAGAGGAAGATTGGCTGCCCCCTCCACCGAAGGTTTCTGTTGATGCAAAACATATGTGTGGAGAAGATTCCACATTGAAGGAGTTAAGGTATTCCAACTTAGTGGTATGCATCTTTTGCTTGATTAATTCACTTATATTTTAACATGGGATCTTTATTTTTATGTGCATAAGCTTCTATGGCATATGTCTCTTGCCATTTTGCCTTTGTATATCATATGTAATCTGCACTGATAGGTTAAAGAAGCAAGAGTTGGCCTCGGTTGCACTATCAGCTAAAAACTTGTTGCGAGAAGTGGAGGAATCTGCAAAAGTGGATGTTGGAAACACGCCCCAGGTCTCCCTGGAGCCTGATTTGGATGATCAAACTCCAATTGCTTCGAAAGAAAGAGCAAAGATTGTTATTTCTGTACGAGACAGTGACAAGGAAGAGCTCAAACAGTTTCGCCTGTTTGTGGTATGTTCTTGTGCATGACTCCATGTTATCCACGACTCATACAACCATCCTGTTTTGTCGATATATCTCATGATTTGCGTTCACTTTTTTTTTATATACGTGCAAGAAGCCTTTAATTTTCCCCAATAATCTTGCATTAGTTGGCATGTTTAGAATCATATGTAGGAACTTTGGTGAAGTTGGGGTGTTGAAAAAGAATAGTGAAAAAAAGAAATAGGTACAGACTATGTTTAGATTGTTTAAATTACGTATCATGCTTCATGGTATTAACTTTCTTCTTGAAACATTGATTAGAAAAAAGGGTTTTGCAAAAAACTGGAATTCTTTCAATTGATTGTTAAAAGGCCGAACAGCTATTAACTTTCTTCTTTATTCTCTGGAAAGAAAGTATGGTTCAGGTCTTGGTTACTTTCTAATTGTCAATAGTGATTAGCCACATGTACCCTTTAATTTGATTTTCTTGTCTTTCCCTTCCACATTATGATTGCCTTAACTTCTCTATTGTTATGTAGTGATCATTACATTTGAACCGAGACATTATTCGTTACTTTTGTTACATAAGTGTTCTATGCGTCGTTTCTGCGATTTTGAATGTGATTTTCTTTGAACTATAGTACTTTCTAGTTTCTATAATTCATTCACATTTAGACTATGATGAAAGTACTTCAGGTCTCTAATGGTGATTGTGCTTGGGACATTGTTTGGTTGAATTGCATTAGGAGAGACTCTCTGATCATCCTGCCTTTGTTGGATTGGTCTCACTCTTTTCTTGTCTCCATATCTCCTGTTTTCATATCAGTTAGATTATTGTTGAAATGAGCTTTCTTTTGCCATTGCCTTTGGCAGGGAAGCGTGGCAGGCCATAGTATTTCTTATCTCTGCTTATGATAATGACACTTCTAAAAGTGTTCCCAAACATACTCTAAAGTGGTTATAAATCTTAATGTGTTGACAGGATGACAAGTTTGAGCGACTTTTCAAAATGTACGCGGACAAACTTAAAATCGACCCTAAGAGTTTGGTTTTCGTTTTCGATGGGGATAAAGTTAGCCCAAACGATACCCCCGTTGACCTTGGCATGGAAGATGATGATATGATCGAAGTGAACATCAAGTCGAGTTGAGTAAGGTGTCTTTTGATTGTATATTTTGTGAATTAGTTCATCAGTTTTGGGACGGGAGACTTAGGAAAGGCCTACTTCCATGCTTTGTACCATGAGATGAACAAATCGCTTATGGAAGGCCGTCAAGGTTCCTTCCTTTGTCTGGTAAGTAAAATTGCTCGGTAAGCGCATTGAGATGAATGGAAAAATAAAATTACATC

mRNA sequence

CAAGGTCTCGCTAGGTAACGCTTCGACGGGAAACGGACAGTCAATTTGAATTTTCCGGCCGGATACGAAGAAGATTTATCGGAGAAGAAGAAGAAGAGTTAAGATTTCGAGGTCTTTGACAATGGCGGATTCCGTTGAAGAATTTGAGCCCTTGTTCGATTACAGCCGCGTTCAGCCTCGCTCCGTTGTTTGTCTTGATGACGAGGATTCGGACGCAGACGTGTCTCGGGAACCTTTTCTGAAGCGAGCGAAGATTTCAAATTCGGCGGTTACGAATTTGGTGGACAATTCAGTTGTTGAAGATAAAGAGGAAGATTGGCTGCCCCCTCCACCGAAGGTTTCTGTTGATGCAAAACATATGTGTGGAGAAGATTCCACATTGAAGGAGTTAAGGTTAAAGAAGCAAGAGTTGGCCTCGGTTGCACTATCAGCTAAAAACTTGTTGCGAGAAGTGGAGGAATCTGCAAAAGTGGATGTTGGAAACACGCCCCAGGTCTCCCTGGAGCCTGATTTGGATGATCAAACTCCAATTGCTTCGAAAGAAAGAGCAAAGATTGTTATTTCTGTACGAGACAGTGACAAGGAAGAGCTCAAACAGTTTCGCCTGTTTGTGGATGACAAGTTTGAGCGACTTTTCAAAATGTACGCGGACAAACTTAAAATCGACCCTAAGAGTTTGGTTTTCGTTTTCGATGGGGATAAAGTTAGCCCAAACGATACCCCCGTTGACCTTGGCATGGAAGATGATGATATGATCGAAGTGAACATCAAGTCGAGTTGAGTAAGGTGTCTTTTGATTGTATATTTTGTGAATTAGTTCATCAGTTTTGGGACGGGAGACTTAGGAAAGGCCTACTTCCATGCTTTGTACCATGAGATGAACAAATCGCTTATGGAAGGCCGTCAAGGTTCCTTCCTTTGTCTGGTAAGTAAAATTGCTCGGTAAGCGCATTGAGATGAATGGAAAAATAAAATTACATC

Coding sequence (CDS)

ATGGCGGATTCCGTTGAAGAATTTGAGCCCTTGTTCGATTACAGCCGCGTTCAGCCTCGCTCCGTTGTTTGTCTTGATGACGAGGATTCGGACGCAGACGTGTCTCGGGAACCTTTTCTGAAGCGAGCGAAGATTTCAAATTCGGCGGTTACGAATTTGGTGGACAATTCAGTTGTTGAAGATAAAGAGGAAGATTGGCTGCCCCCTCCACCGAAGGTTTCTGTTGATGCAAAACATATGTGTGGAGAAGATTCCACATTGAAGGAGTTAAGGTTAAAGAAGCAAGAGTTGGCCTCGGTTGCACTATCAGCTAAAAACTTGTTGCGAGAAGTGGAGGAATCTGCAAAAGTGGATGTTGGAAACACGCCCCAGGTCTCCCTGGAGCCTGATTTGGATGATCAAACTCCAATTGCTTCGAAAGAAAGAGCAAAGATTGTTATTTCTGTACGAGACAGTGACAAGGAAGAGCTCAAACAGTTTCGCCTGTTTGTGGATGACAAGTTTGAGCGACTTTTCAAAATGTACGCGGACAAACTTAAAATCGACCCTAAGAGTTTGGTTTTCGTTTTCGATGGGGATAAAGTTAGCCCAAACGATACCCCCGTTGACCTTGGCATGGAAGATGATGATATGATCGAAGTGAACATCAAGTCGAGTTGA

Protein sequence

MADSVEEFEPLFDYSRVQPRSVVCLDDEDSDADVSREPFLKRAKISNSAVTNLVDNSVVEDKEEDWLPPPPKVSVDAKHMCGEDSTLKELRLKKQELASVALSAKNLLREVEESAKVDVGNTPQVSLEPDLDDQTPIASKERAKIVISVRDSDKEELKQFRLFVDDKFERLFKMYADKLKIDPKSLVFVFDGDKVSPNDTPVDLGMEDDDMIEVNIKSS

Homology

[Close]

BLAST of Tan0002291 vs. ExPASy Swiss-Prot
Match: P55853 (Small ubiquitin-related modifier OS=Caenorhabditis elegans OX=6239 GN=smo-1 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 8.5e-05
Identity = 32/82 (39.02%), Postives = 43/82 (52.44%), Query Frame = 0


Query: 133 DQTPIASKERAKIVISVRDSDKEELKQFRLFVDDKFERLFKMYADKLKIDPKSLVFVFDG 192
           D    A      I I V   D  E+  FR+       +L K YAD+  +   SL F+FDG
Sbjct: 3   DDAAQAGDNAEYIKIKVVGQDSNEV-HFRVKYGTSMAKLKKSYADRTGVAVNSLRFLFDG 62

Query: 193 DKVSPNDTPVDLGMEDDDMIEV 215
            +++ +DTP  L MEDDD+IEV
Sbjct: 63  RRINDDDTPKTLEMEDDDVIEV 83

[Close]

BLAST of Tan0002291 vs. ExPASy Swiss-Prot
Match: B3H5R8 (Putative small ubiquitin-related modifier 8 OS=Arabidopsis thaliana OX=3702 GN=SUMO8 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.9e-04
Identity = 24/69 (34.78%), Postives = 44/69 (63.77%), Query Frame = 0


Query: 145 IVISVRDSDKEELKQFRLFVDDKFERLFKMYADKLKIDPKSLVFVFDGDKVSPNDTPVDL 204
           I + V++ D +    FR+  D +  ++   Y+DK+ ++  +L F+FDG+++  N TP +L
Sbjct: 15  ITVKVKNQD-DICVYFRIKRDVELRKMMHAYSDKVGVEMSTLRFLFDGNRIKLNQTPNEL 74

Query: 205 GMEDDDMIE 214
           G+ED+D IE
Sbjct: 75  GLEDEDEIE 82

[Close]

BLAST of Tan0002291 vs. ExPASy Swiss-Prot
Match: Q8NCF5 (NFATC2-interacting protein OS=Homo sapiens OX=9606 GN=NFATC2IP PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 3.2e-04
Identity = 25/80 (31.25%), Postives = 43/80 (53.75%), Query Frame = 0


Query: 135 TPIASKERAKIVISVRDSDKEELKQFRLFVDDKFERLFKMYADKLKIDPKSLVFVFDGDK 194
           +P A++   ++ + V+  +K +  +  L  D   + L   Y + + +  + L F FDG K
Sbjct: 338 SPEATETSQQLQLRVQGKEKHQTLEVSLSRDSPLKTLMSHYEEAMGLSGRKLSFFFDGTK 397

Query: 195 VSPNDTPVDLGMEDDDMIEV 215
           +S  + P DLGME  D+IEV
Sbjct: 398 LSGRELPADLGMESGDLIEV 417

[Close]

BLAST of Tan0002291 vs. ExPASy Swiss-Prot
Match: Q9GLZ9 (NFATC2-interacting protein OS=Macaca fascicularis OX=9541 GN=NFATC2IP PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 3.2e-04
Identity = 25/80 (31.25%), Postives = 43/80 (53.75%), Query Frame = 0


Query: 135 TPIASKERAKIVISVRDSDKEELKQFRLFVDDKFERLFKMYADKLKIDPKSLVFVFDGDK 194
           +P A++   ++ + V+  +K +  +  L  D   + L   Y + + +  + L F FDG K
Sbjct: 327 SPEATETSRQLQLRVQGKEKHQTLEVSLSRDSPLKTLMSHYEEAMGLSGRKLSFFFDGTK 386

Query: 195 VSPNDTPVDLGMEDDDMIEV 215
           +S  + P DLGME  D+IEV
Sbjct: 387 LSGRELPADLGMESGDLIEV 406

[Close]

BLAST of Tan0002291 vs. ExPASy Swiss-Prot
Match: Q9VCP1 (Uncharacterized protein CG4449 OS=Drosophila melanogaster OX=7227 GN=CG4449 PE=1 SV=4)

HSP 1 Score: 47.0 bits (110), Expect = 3.2e-04
Identity = 21/53 (39.62%), Postives = 36/53 (67.92%), Query Frame = 0


Query: 166 DKFERLFKMYADKLKIDPKSLVFVFDGDKVSPNDTPVDLGMEDDDMIEVNIKS 219
           D F+ +F   A++L  DP+++   FDGD + PNDTP +  ME +++I++ IK+
Sbjct: 372 DNFKIIFIKCAEELNCDPRTIKLFFDGDLLDPNDTPNNQDMEGNEVIDLKIKA 424

[Close]

BLAST of Tan0002291 vs. NCBI nr
Match: XP_023541755.1 (uncharacterized protein LOC111801815 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 373.6 bits (958), Expect = 1.1e-99
Identity = 197/221 (89.14%), Postives = 203/221 (91.86%), Query Frame = 0


Query: 1   MADSVEEFEPLFDYSRVQPRSVVCLDDEDSDADVSREPFLKRAKISNSAVTNLVDNSVV- 60
           MADS EEFEPLFDYSRVQPRSVVCLDDEDSD + SR PF KR KISNSAVTN V+N VV 
Sbjct: 1   MADSAEEFEPLFDYSRVQPRSVVCLDDEDSDVEESRVPFSKRTKISNSAVTNFVENPVVE 60

Query: 61  -EDKEEDWLPPPPKVSVDAKHMCGEDSTLKELRLKKQELASVALSAKNLLREVEESAKVD 120
            EDKEEDWLPPPPKVSVDAK MCGEDSTLK+LRLKKQELASVALSAKNLLREVEESAKVD
Sbjct: 61  IEDKEEDWLPPPPKVSVDAKDMCGEDSTLKKLRLKKQELASVALSAKNLLREVEESAKVD 120

Query: 121 VGNTPQVSLEPDLDDQTPIASKERAKIVISVRDSDKEELKQFRLFVDDKFERLFKMYADK 180
           VG TP VSLEP +DDQ PIASKER KIVISVRDSDKEEL+QFRLFVDDKFERLFKMYADK
Sbjct: 121 VGTTPHVSLEPAVDDQAPIASKEREKIVISVRDSDKEELQQFRLFVDDKFERLFKMYADK 180

Query: 181 LKIDPKSLVFVFDGDKVSPNDTPVDLGMEDDDMIEVNIKSS 220
           LKIDPKSLVFVFDGDKV P+DTPV LGMEDDDMIEVNIKSS
Sbjct: 181 LKIDPKSLVFVFDGDKVGPDDTPVSLGMEDDDMIEVNIKSS 221

[Close]

BLAST of Tan0002291 vs. NCBI nr
Match: XP_022968592.1 (uncharacterized protein LOC111467764 [Cucurbita maxima])

HSP 1 Score: 369.8 bits (948), Expect = 1.7e-98
Identity = 196/221 (88.69%), Postives = 202/221 (91.40%), Query Frame = 0


Query: 1   MADSVEEFEPLFDYSRVQPRSVVCLDDEDSDADVSREPFLKRAKISNSAVTNLVDNSVV- 60
           MADS EEFEPLFDYSRVQPRSVVCLDDEDSD + SR PF KR KISNSAVTNLVDN  V 
Sbjct: 1   MADSAEEFEPLFDYSRVQPRSVVCLDDEDSDVEESRVPFSKRTKISNSAVTNLVDNQAVE 60

Query: 61  -EDKEEDWLPPPPKVSVDAKHMCGEDSTLKELRLKKQELASVALSAKNLLREVEESAKVD 120
            EDKEEDWLPPPPKVSVDAK M GEDSTLK+LRLKKQELASVALSAKNLLREVEESAKVD
Sbjct: 61  NEDKEEDWLPPPPKVSVDAKDMYGEDSTLKKLRLKKQELASVALSAKNLLREVEESAKVD 120

Query: 121 VGNTPQVSLEPDLDDQTPIASKERAKIVISVRDSDKEELKQFRLFVDDKFERLFKMYADK 180
           VG TP VSL+P +DDQ PIASKER KIVISVRDSDKEEL+QFRLFVDDKFERLFKMYADK
Sbjct: 121 VGTTPHVSLDPAVDDQAPIASKEREKIVISVRDSDKEELQQFRLFVDDKFERLFKMYADK 180

Query: 181 LKIDPKSLVFVFDGDKVSPNDTPVDLGMEDDDMIEVNIKSS 220
           LKIDPKSLVFVFDGDKV P+DTPV LGMEDDDMIEVNIKSS
Sbjct: 181 LKIDPKSLVFVFDGDKVGPDDTPVGLGMEDDDMIEVNIKSS 221

[Close]

BLAST of Tan0002291 vs. NCBI nr
Match: XP_022945140.1 (uncharacterized protein LOC111449468 [Cucurbita moschata] >KAG6573932.1 Small ubiquitin-related modifier, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 367.5 bits (942), Expect = 8.2e-98
Identity = 194/221 (87.78%), Postives = 202/221 (91.40%), Query Frame = 0


Query: 1   MADSVEEFEPLFDYSRVQPRSVVCLDDEDSDADVSREPFLKRAKISNSAVTNLVDNSVV- 60
           MADS EEFEPLFDYSRVQP SVVCLDDEDSD + SR PF KR KISNSAVTN V+N  V 
Sbjct: 1   MADSAEEFEPLFDYSRVQPHSVVCLDDEDSDVEESRVPFSKRTKISNSAVTNFVENPFVE 60

Query: 61  -EDKEEDWLPPPPKVSVDAKHMCGEDSTLKELRLKKQELASVALSAKNLLREVEESAKVD 120
            EDKEEDWLPPPPKVSVDAK MCGEDSTLK+LRLKKQELASVALSAKNLLREVEESA+VD
Sbjct: 61  IEDKEEDWLPPPPKVSVDAKDMCGEDSTLKKLRLKKQELASVALSAKNLLREVEESARVD 120

Query: 121 VGNTPQVSLEPDLDDQTPIASKERAKIVISVRDSDKEELKQFRLFVDDKFERLFKMYADK 180
           V NTPQVSLEP LDDQ PIASKER KIVISVRDSDKEEL+QFRLFVDDKFERLFKMY++K
Sbjct: 121 VENTPQVSLEPALDDQAPIASKEREKIVISVRDSDKEELQQFRLFVDDKFERLFKMYSNK 180

Query: 181 LKIDPKSLVFVFDGDKVSPNDTPVDLGMEDDDMIEVNIKSS 220
           LKIDPKSLVFVFDGDKV P+DTPV LGMEDDDMIEVNIKSS
Sbjct: 181 LKIDPKSLVFVFDGDKVGPDDTPVGLGMEDDDMIEVNIKSS 221

[Close]

BLAST of Tan0002291 vs. NCBI nr
Match: KAG7012997.1 (Small ubiquitin-related modifier [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 366.3 bits (939), Expect = 1.8e-97
Identity = 193/221 (87.33%), Postives = 202/221 (91.40%), Query Frame = 0


Query: 1   MADSVEEFEPLFDYSRVQPRSVVCLDDEDSDADVSREPFLKRAKISNSAVTNLVDNSVV- 60
           MADS EEFEPLFDYSRVQP SVVCLDDEDSD + SR PF KR KISNSAVTN V+N  V 
Sbjct: 1   MADSAEEFEPLFDYSRVQPHSVVCLDDEDSDVEESRVPFSKRTKISNSAVTNFVENPFVE 60

Query: 61  -EDKEEDWLPPPPKVSVDAKHMCGEDSTLKELRLKKQELASVALSAKNLLREVEESAKVD 120
            EDKEEDWLPPPPKV+VDAK MCGEDSTLK+LRLKKQELASVALSAKNLLREVEESA+VD
Sbjct: 61  IEDKEEDWLPPPPKVAVDAKDMCGEDSTLKKLRLKKQELASVALSAKNLLREVEESARVD 120

Query: 121 VGNTPQVSLEPDLDDQTPIASKERAKIVISVRDSDKEELKQFRLFVDDKFERLFKMYADK 180
           V NTPQVSLEP LDDQ PIASKER KIVISVRDSDKEEL+QFRLFVDDKFERLFKMY++K
Sbjct: 121 VENTPQVSLEPALDDQAPIASKEREKIVISVRDSDKEELQQFRLFVDDKFERLFKMYSNK 180

Query: 181 LKIDPKSLVFVFDGDKVSPNDTPVDLGMEDDDMIEVNIKSS 220
           LKIDPKSLVFVFDGDKV P+DTPV LGMEDDDMIEVNIKSS
Sbjct: 181 LKIDPKSLVFVFDGDKVGPDDTPVGLGMEDDDMIEVNIKSS 221

[Close]

BLAST of Tan0002291 vs. NCBI nr
Match: XP_038891511.1 (uncharacterized protein LOC120080907 [Benincasa hispida])

HSP 1 Score: 358.6 bits (919), Expect = 3.8e-95
Identity = 192/225 (85.33%), Postives = 201/225 (89.33%), Query Frame = 0


Query: 1   MADSVEEFEPLFDYSRVQPRSVVCLDDEDSDADVSREPFLKRAKISNSAVTNLVDNS--- 60
           MADS EEFEPLFDYSRVQPRSVVCLDDEDSDAD S  PF KR KI N A T+LVD++   
Sbjct: 1   MADSAEEFEPLFDYSRVQPRSVVCLDDEDSDADKSPAPFSKRVKIVNPAATSLVDSNPKE 60

Query: 61  ---VVEDKEEDWLPPPPKVSVDAKHMCGEDSTLKELRLKKQELASVALSAKNLLREVEES 120
               +EDKEEDWLPPPPKV VDA++MCGEDSTLKELRLKKQELASVALSAKNLLREVEES
Sbjct: 61  KQVEIEDKEEDWLPPPPKVLVDAENMCGEDSTLKELRLKKQELASVALSAKNLLREVEES 120

Query: 121 AKVDVGNTPQVSLEPDLDDQTPIASKERAKIVISVRDSDKEELKQFRLFVDDKFERLFKM 180
           AKVDVGN P  SLEPDLD QTPIASKERAKIVISVRDSDKEELKQFRLFVDDKFERLFKM
Sbjct: 121 AKVDVGNKPD-SLEPDLDVQTPIASKERAKIVISVRDSDKEELKQFRLFVDDKFERLFKM 180

Query: 181 YADKLKIDPKSLVFVFDGDKVSPNDTPVDLGMEDDDMIEVNIKSS 220
           YADK KIDPK+L+FVFDGDKV P+DTPV LGMEDDDMIEVNIKSS
Sbjct: 181 YADKHKIDPKNLIFVFDGDKVGPDDTPVSLGMEDDDMIEVNIKSS 224

[Close]

BLAST of Tan0002291 vs. ExPASy TrEMBL
Match: A0A6J1HTX5 (uncharacterized protein LOC111467764 OS=Cucurbita maxima OX=3661 GN=LOC111467764 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 8.0e-99
Identity = 196/221 (88.69%), Postives = 202/221 (91.40%), Query Frame = 0


Query: 1   MADSVEEFEPLFDYSRVQPRSVVCLDDEDSDADVSREPFLKRAKISNSAVTNLVDNSVV- 60
           MADS EEFEPLFDYSRVQPRSVVCLDDEDSD + SR PF KR KISNSAVTNLVDN  V 
Sbjct: 1   MADSAEEFEPLFDYSRVQPRSVVCLDDEDSDVEESRVPFSKRTKISNSAVTNLVDNQAVE 60

Query: 61  -EDKEEDWLPPPPKVSVDAKHMCGEDSTLKELRLKKQELASVALSAKNLLREVEESAKVD 120
            EDKEEDWLPPPPKVSVDAK M GEDSTLK+LRLKKQELASVALSAKNLLREVEESAKVD
Sbjct: 61  NEDKEEDWLPPPPKVSVDAKDMYGEDSTLKKLRLKKQELASVALSAKNLLREVEESAKVD 120

Query: 121 VGNTPQVSLEPDLDDQTPIASKERAKIVISVRDSDKEELKQFRLFVDDKFERLFKMYADK 180
           VG TP VSL+P +DDQ PIASKER KIVISVRDSDKEEL+QFRLFVDDKFERLFKMYADK
Sbjct: 121 VGTTPHVSLDPAVDDQAPIASKEREKIVISVRDSDKEELQQFRLFVDDKFERLFKMYADK 180

Query: 181 LKIDPKSLVFVFDGDKVSPNDTPVDLGMEDDDMIEVNIKSS 220
           LKIDPKSLVFVFDGDKV P+DTPV LGMEDDDMIEVNIKSS
Sbjct: 181 LKIDPKSLVFVFDGDKVGPDDTPVGLGMEDDDMIEVNIKSS 221

[Close]

BLAST of Tan0002291 vs. ExPASy TrEMBL
Match: A0A6J1G027 (uncharacterized protein LOC111449468 OS=Cucurbita moschata OX=3662 GN=LOC111449468 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 4.0e-98
Identity = 194/221 (87.78%), Postives = 202/221 (91.40%), Query Frame = 0


Query: 1   MADSVEEFEPLFDYSRVQPRSVVCLDDEDSDADVSREPFLKRAKISNSAVTNLVDNSVV- 60
           MADS EEFEPLFDYSRVQP SVVCLDDEDSD + SR PF KR KISNSAVTN V+N  V 
Sbjct: 1   MADSAEEFEPLFDYSRVQPHSVVCLDDEDSDVEESRVPFSKRTKISNSAVTNFVENPFVE 60

Query: 61  -EDKEEDWLPPPPKVSVDAKHMCGEDSTLKELRLKKQELASVALSAKNLLREVEESAKVD 120
            EDKEEDWLPPPPKVSVDAK MCGEDSTLK+LRLKKQELASVALSAKNLLREVEESA+VD
Sbjct: 61  IEDKEEDWLPPPPKVSVDAKDMCGEDSTLKKLRLKKQELASVALSAKNLLREVEESARVD 120

Query: 121 VGNTPQVSLEPDLDDQTPIASKERAKIVISVRDSDKEELKQFRLFVDDKFERLFKMYADK 180
           V NTPQVSLEP LDDQ PIASKER KIVISVRDSDKEEL+QFRLFVDDKFERLFKMY++K
Sbjct: 121 VENTPQVSLEPALDDQAPIASKEREKIVISVRDSDKEELQQFRLFVDDKFERLFKMYSNK 180

Query: 181 LKIDPKSLVFVFDGDKVSPNDTPVDLGMEDDDMIEVNIKSS 220
           LKIDPKSLVFVFDGDKV P+DTPV LGMEDDDMIEVNIKSS
Sbjct: 181 LKIDPKSLVFVFDGDKVGPDDTPVGLGMEDDDMIEVNIKSS 221

[Close]

BLAST of Tan0002291 vs. ExPASy TrEMBL
Match: A0A6J1H158 (uncharacterized protein LOC111458628 OS=Cucurbita moschata OX=3662 GN=LOC111458628 PE=3 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.5e-92
Identity = 185/225 (82.22%), Postives = 199/225 (88.44%), Query Frame = 0


Query: 1   MADSVEEFEPLFDYSRVQPRSVVCLDDEDSDADVSREPFLKRAKISNSAVTNLVD----- 60
           MAD  EEFEPLFDYSRVQPRSV CLDDEDSDA +S EPF KR++I N AVT+LVD     
Sbjct: 1   MADYAEEFEPLFDYSRVQPRSVDCLDDEDSDACMSPEPFSKRSRILNPAVTSLVDGIRKD 60

Query: 61  -NSVVEDKEEDWLPPPPKVSVDAKHMCGEDSTLKELRLKKQELASVALSAKNLLREVEES 120
               +ED+EEDWLPPPPKVSVDAK+MCGEDSTLKELRL K ELASVALSAKNLLREVEES
Sbjct: 61  KQVEIEDEEEDWLPPPPKVSVDAKNMCGEDSTLKELRLMKLELASVALSAKNLLREVEES 120

Query: 121 AKVDVGNTPQVSLEPDLDDQTPIASKERAKIVISVRDSDKEELKQFRLFVDDKFERLFKM 180
           AK+DVGNTPQ  LEP LDDQ PIASKERAKIVISVRDSDKEELKQFRLF+DDKFERLFKM
Sbjct: 121 AKMDVGNTPQDPLEPALDDQIPIASKERAKIVISVRDSDKEELKQFRLFMDDKFERLFKM 180

Query: 181 YADKLKIDPKSLVFVFDGDKVSPNDTPVDLGMEDDDMIEVNIKSS 220
           YA+K KIDPKSLVF+FDGDKVSP+DTP  LGMEDDDMI+VNI+SS
Sbjct: 181 YAEKRKIDPKSLVFIFDGDKVSPDDTPTGLGMEDDDMIDVNIRSS 225

[Close]

BLAST of Tan0002291 vs. ExPASy TrEMBL
Match: A0A0A0KWH7 (Rad60-SLD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G610500 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 1.8e-90
Identity = 185/225 (82.22%), Postives = 195/225 (86.67%), Query Frame = 0


Query: 1   MADSVEEFEPLFDYSRVQPRSVVCLDDEDSDADVSREPFLKRAKISNSAVTNLVDNS--- 60
           MADS EEFEPLFDYSRVQP SVVCLDDEDSDAD S  PF KRAKI N A T+ V+ +   
Sbjct: 1   MADSAEEFEPLFDYSRVQPPSVVCLDDEDSDADKSPAPFTKRAKIVNPAATSSVNGNPKE 60

Query: 61  ---VVEDKEEDWLPPPPKVSVDAKHMCGEDSTLKELRLKKQELASVALSAKNLLREVEES 120
               +EDKEEDWLPPPPKV VDA++   EDSTLKELRLKKQELASVALSAKNLLREVEES
Sbjct: 61  KQVEIEDKEEDWLPPPPKVLVDAENRHVEDSTLKELRLKKQELASVALSAKNLLREVEES 120

Query: 121 AKVDVGNTPQVSLEPDLDDQTPIASKERAKIVISVRDSDKEELKQFRLFVDDKFERLFKM 180
           AKVDVGNT    LEPDLD QTP+ASKERAKIVISVRDSDKEELKQ+RLFVDDKFERLFK+
Sbjct: 121 AKVDVGNTSMDPLEPDLDVQTPVASKERAKIVISVRDSDKEELKQYRLFVDDKFERLFKL 180

Query: 181 YADKLKIDPKSLVFVFDGDKVSPNDTPVDLGMEDDDMIEVNIKSS 220
           YADKLKIDPKSLVFVFDGDKV P+DTP  LGMEDDDMIEVNIKSS
Sbjct: 181 YADKLKIDPKSLVFVFDGDKVGPDDTPGGLGMEDDDMIEVNIKSS 225

[Close]

BLAST of Tan0002291 vs. ExPASy TrEMBL
Match: A0A5A7SVU4 (Putative Ubiquitin-like superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001350 PE=3 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 4.0e-90
Identity = 182/225 (80.89%), Postives = 194/225 (86.22%), Query Frame = 0


Query: 1   MADSVEEFEPLFDYSRVQPRSVVCLDDEDSDADVSREPFLKRAKISNSAVTNLVDNS--- 60
           MADS EEFEPLFDYSRVQP SVVCLDDEDSDAD S  PF KRAKI+N A T+ V+ +   
Sbjct: 1   MADSAEEFEPLFDYSRVQPPSVVCLDDEDSDADKSPAPFTKRAKIANLAATSSVNGNPKE 60

Query: 61  ---VVEDKEEDWLPPPPKVSVDAKHMCGEDSTLKELRLKKQELASVALSAKNLLREVEES 120
               +ED EEDWLPPPPKV VD  +  GEDSTLKELRLKKQELASVALSAKNLLREVEES
Sbjct: 61  KQVEIEDNEEDWLPPPPKVLVDGNNRRGEDSTLKELRLKKQELASVALSAKNLLREVEES 120

Query: 121 AKVDVGNTPQVSLEPDLDDQTPIASKERAKIVISVRDSDKEELKQFRLFVDDKFERLFKM 180
           AKVDVGNT + SLEPDLD QTP+ SKERAKIVISVRDSDKEELKQ+RLFVDD FERLFK+
Sbjct: 121 AKVDVGNTSKDSLEPDLDVQTPVVSKERAKIVISVRDSDKEELKQYRLFVDDNFERLFKI 180

Query: 181 YADKLKIDPKSLVFVFDGDKVSPNDTPVDLGMEDDDMIEVNIKSS 220
           YADKLKIDP+SLVFVFDGDK+ PNDTP  LGMEDDDMIEVNIKSS
Sbjct: 181 YADKLKIDPESLVFVFDGDKIGPNDTPGGLGMEDDDMIEVNIKSS 225

[Close]

BLAST of Tan0002291 vs. TAIR 10
Match: AT1G68185.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 179.5 bits (454), Expect = 2.9e-45
Identity = 105/223 (47.09%), Postives = 144/223 (64.57%), Query Frame = 0


Query: 1   MADSVEEFEPLFDYSRVQPRSVVCLDDEDSDADVSREPFLKRAKISNSAVTNLVDNSVVE 60
           M    E+ EPLFDY RVQP + VC+DD+D DA V+  P  K+AK S +      D  V+E
Sbjct: 1   MGGEGEDLEPLFDYRRVQPANFVCIDDDDDDASVT--PIPKKAKTSQTVEKLDDDVKVIE 60

Query: 61  -DKEEDWLPPPPKVSVDAKHMCGEDSTLKELRLKKQELASVALSAKNLLREVEESAKVDV 120
              ++DWL PPPKV  D      EDST+K LR KK EL S   +  ++++EVEESAK +V
Sbjct: 61  VTGDDDWLLPPPKVIFDKSKDSVEDSTIKALRSKKMELMSFTKTVGDVMQEVEESAKREV 120

Query: 121 GNTPQVSLEPDLDDQTPIASK---ERAKIVISVRDSDKEELKQFRLFVDDKFERLFKMYA 180
               + S  P  +    + S+   +RAKIVI+++D D +  K  R+F D+KFER+ K+Y 
Sbjct: 121 ----EESRNPSSETAAQLPSEPTNDRAKIVITIQDKDGQ--KTLRVFADEKFERVIKLYT 180

Query: 181 DKLKIDPKSLVFVFDGDKVSPNDTPVDLGMEDDDMIEVNIKSS 220
           DK K+DP++LVF+FDGDK+ P+ TP +LGMED DMIEV+ K +
Sbjct: 181 DKAKLDPQNLVFIFDGDKIDPSTTPSELGMEDHDMIEVHTKKT 215

[Close]

BLAST of Tan0002291 vs. TAIR 10
Match: AT5G55856.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 47.8 bits (112), Expect = 1.3e-05
Identity = 24/69 (34.78%), Postives = 44/69 (63.77%), Query Frame = 0


Query: 145 IVISVRDSDKEELKQFRLFVDDKFERLFKMYADKLKIDPKSLVFVFDGDKVSPNDTPVDL 204
           I + V++ D +    FR+  D +  ++   Y+DK+ ++  +L F+FDG+++  N TP +L
Sbjct: 15  ITVKVKNQD-DICVYFRIKRDVELRKMMHAYSDKVGVEMSTLRFLFDGNRIKLNQTPNEL 74

Query: 205 GMEDDDMIE 214
           G+ED+D IE
Sbjct: 75  GLEDEDEIE 82

[Close]

BLAST of Tan0002291 vs. TAIR 10
Match: AT5G55160.2 (small ubiquitin-like modifier 2 )

HSP 1 Score: 43.5 bits (101), Expect = 2.5e-04
Identity = 30/95 (31.58%), Postives = 49/95 (51.58%), Query Frame = 0


Query: 122 TPQVSLEPDLDDQTPIASKERAKIVIS---VRDSDKEELKQFRLFVDDKFERLFKMYADK 181
           TP+   +PD      +  K +A  V+    V D+D  E+  FR+    + ++L   Y D+
Sbjct: 4   TPEEDKKPDQGAHINLKVKGQAFFVVGTWLVIDTDGNEV-FFRIKRSTQLKKLMNAYCDR 63

Query: 182 LKIDPKSLVFVFDGDKVSPNDTPVDLGMEDDDMIE 214
             +D  S+ F+FDG ++    TP +L MED D I+
Sbjct: 64  QSVDFNSIAFLFDGRRLRAEQTPDELEMEDGDEID 97

[Close]

BLAST of Tan0002291 vs. TAIR 10
Match: AT4G26840.1 (small ubiquitin-like modifier 1 )

HSP 1 Score: 42.4 bits (98), Expect = 5.6e-04
Identity = 24/71 (33.80%), Postives = 39/71 (54.93%), Query Frame = 0


Query: 143 AKIVISVRDSDKEELKQFRLFVDDKFERLFKMYADKLKIDPKSLVFVFDGDKVSPNDTPV 202
           A I + V+  D  E+  FR+    + ++L   Y D+  +D  S+ F+FDG ++    TP 
Sbjct: 16  AHINLKVKGQDGNEV-FFRIKRSTQLKKLMNAYCDRQSVDMNSIAFLFDGRRLRAEQTPD 75

Query: 203 DLGMEDDDMIE 214
           +L MED D I+
Sbjct: 76  ELDMEDGDEID 85

[Close]

BLAST of Tan0002291 vs. TAIR 10
Match: AT5G55170.1 (small ubiquitin-like modifier 3 )

HSP 1 Score: 42.4 bits (98), Expect = 5.6e-04
Identity = 24/84 (28.57%), Postives = 47/84 (55.95%), Query Frame = 0


Query: 133 DQTPIASKERAKIVISVRDSDKEELKQFRLFVDDK---FERLFKMYADKLKIDPKSLVFV 192
           D  PI  ++ A +++ V+  D +E+    LF + K    ++L  +Y D+  +   +  F+
Sbjct: 6   DDKPIDQEQEAHVILKVKSQDGDEV----LFKNKKSAPLKKLMYVYCDRRGLKLDAFAFI 65

Query: 193 FDGDKVSPNDTPVDLGMEDDDMIE 214
           F+G ++   +TP +L MED D+I+
Sbjct: 66  FNGARIGGLETPDELDMEDGDVID 85

The following BLAST results are available for this feature:

BLAST of Tan0002291 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P55853	8.5e-05	39.02	Small ubiquitin-related modifier OS=Caenorhabditis elegans OX=6239 GN=smo-1 PE=1...	[more]
B3H5R8	1.9e-04	34.78	Putative small ubiquitin-related modifier 8 OS=Arabidopsis thaliana OX=3702 GN=S...	[more]
Q8NCF5	3.2e-04	31.25	NFATC2-interacting protein OS=Homo sapiens OX=9606 GN=NFATC2IP PE=1 SV=1	[more]
Q9GLZ9	3.2e-04	31.25	NFATC2-interacting protein OS=Macaca fascicularis OX=9541 GN=NFATC2IP PE=2 SV=1	[more]
Q9VCP1	3.2e-04	39.62	Uncharacterized protein CG4449 OS=Drosophila melanogaster OX=7227 GN=CG4449 PE=1...	[more]

BLAST of Tan0002291 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023541755.1	1.1e-99	89.14	uncharacterized protein LOC111801815 [Cucurbita pepo subsp. pepo]	[more]
XP_022968592.1	1.7e-98	88.69	uncharacterized protein LOC111467764 [Cucurbita maxima]	[more]
XP_022945140.1	8.2e-98	87.78	uncharacterized protein LOC111449468 [Cucurbita moschata] >KAG6573932.1 Small ub...	[more]
KAG7012997.1	1.8e-97	87.33	Small ubiquitin-related modifier [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038891511.1	3.8e-95	85.33	uncharacterized protein LOC120080907 [Benincasa hispida]	[more]

BLAST of Tan0002291 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HTX5	8.0e-99	88.69	uncharacterized protein LOC111467764 OS=Cucurbita maxima OX=3661 GN=LOC111467764...	[more]
A0A6J1G027	4.0e-98	87.78	uncharacterized protein LOC111449468 OS=Cucurbita moschata OX=3662 GN=LOC1114494...	[more]
A0A6J1H158	1.5e-92	82.22	uncharacterized protein LOC111458628 OS=Cucurbita moschata OX=3662 GN=LOC1114586...	[more]
A0A0A0KWH7	1.8e-90	82.22	Rad60-SLD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G610500 P...	[more]
A0A5A7SVU4	4.0e-90	80.89	Putative Ubiquitin-like superfamily protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Tan0002291 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68185.1	2.9e-45	47.09	Ubiquitin-like superfamily protein	[more]
AT5G55856.1	1.3e-05	34.78	Ubiquitin-like superfamily protein	[more]
AT5G55160.2	2.5e-04	31.58	small ubiquitin-like modifier 2	[more]
AT4G26840.1	5.6e-04	33.80	small ubiquitin-like modifier 1	[more]
AT5G55170.1	5.6e-04	28.57	small ubiquitin-like modifier 3	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 132..216 e-value: 1.9E-21 score: 78.1
None	No IPR available	PANTHER	PTHR47813	UBIQUITIN-LIKE SUPERFAMILY PROTEIN	coord: 1..219
None	No IPR available	CDD	cd01763	Ubl_SUMO_like	coord: 144..214 e-value: 1.91718E-23 score: 87.2505
IPR022617	Rad60/SUMO-like domain	PFAM	PF11976	Rad60-SLD	coord: 145..216 e-value: 2.0E-13 score: 50.0
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 145..219 score: 9.308193
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 133..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0002291.1	Tan0002291.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008270	zinc ion binding