Tan0002281 (gene) Snake gourd v1

Overview
NameTan0002281
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionReverse transcriptase domain-containing protein
LocationLG04: 43638530 .. 43657048 (+)
RNA-Seq ExpressionTan0002281
SyntenyTan0002281
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTAAGGAAGGAATTGTGTTAGGACCCAAGGTGTCAAAAGAAGGATTAGAGTTGATAAGGCAAATATAGAGATAGTGGAGAGGTTAGAACCTCCAAGAAATGTTAAGGGAGTACGAAGCTTCCTAAGACATGCAGGGTTCTACCATGGTTTCATTAGAGACTTCTCTAAAATCTCGAAACCTTTTTGTTCCTTATTGGATATCAATGGACATTTTGAATTCACAGAGGAATGTCTAAATGCTTTTAAGGTGTTGAAGGATGCCCTAGTGAGTGCCACAATCATGTCTTCACCTGATTGGTAGTTGTTGATGCAAGTGATTATGTTGTGGGAGTAATGTTAGGCCAGAGGCATGAAAAAGTAATTCATCTTATTTACTATGCAAGTAAAACCTTAAATGAAACACAAAAGAATTACACCACAATAGGAAAGGAGTTGTTGGCAGTAGTCTTTACTTTTGAGAAGTTTAGACCTTACTTGCTTGGTACCAAAGTAGTTGTCTATACAGACCATGCTGCTATTAAGTACTTTCTAGCCAAGAAAGATGCTAAACCAAGGTTGATAAGATGGGTGTTACTTTTGCAAGAATTCGAAGTAGAAATCGGAGATAAGAAAGGTTCTGAGAATGTGGTTGCAGATCACCTCTCTAGGATTGAGAATTCTCAACCCTTAGCCTCTCAACCTGATATCAAAGTTTGTTTTCCAGATGAGCAACTTCTTTTAATTGCTAGTATTTAGGAAATCAAGCCACCTTGGTTTGCTGACTATGATAATTTCTTAGCTAGCAATATTTTTCCTCAAGACTTGTCCAAGCAACAATTGAAAAAGTTCTTGCATGATGTTATGTTGTAGTTATGGGATGATCCTTGTTTATACACGCATTGTGTGGATGGAATCATAAGGAGATGTGTTGAAGAGAGTGAGATACCCTCTATCCTTGAACATTTCTATTCGCCCACTTATGGAGGTCATTTTGGAGGCCAAAGGACGACTGCAAAAGTGTTTTAGTCAGGGTATTTTTGGCCATCTATCTTCAGAGATGCCCACATTTTTCAGTAAGACTTGTGATACATGCTAAAGGAAAAGAAACATTGGAAGAAGGGATGAAATGCCCTTGACATATATCCTAGAAGTTGAACTCTTTGATGTATGGGGTATTCACTTCATGGGACCGTTTCCACCTTCCAAAGGAAATTTGTACATCTTGGTTGCAGTTGATTATGTTTCTAAATGGGATGAAGCCATGGCTTGTCAATCTAATGATACAAAAACAGTAATGAGAATTCTGCATAGTCATATATATTCACTACGTTTGGGGCTCCTAGAGTCTTGATCAGTGATGAAGGGTCTCACTTTGTTAAATCCGAGAAGCCTCTGGTTTTTGGGTCGTGCTGATCAGTAGGATTCGAATCAGAAGCTCTAATAGGTATGATTGGAAAGCTTATTGAATTTTCTACAACTTTCATGAAGAACTCGTGAGTAGAAATCGACTGGAAGATGTTTAAAATTCCAGGTCAATTTCGGGTTGCAGCTGGTAAACGAATCTGGAATAGCAGAAGTTTGTTTTTGGGGAAGAAGCTTTCGAGGTATTTTTTAATAAATTCGTTGTGAATCTCAATTTCATTTCTTCATATGGTTTTTAGAGGGTTCAAAAAGAAAGAGTTTGGTATAAAGTACATCCTTTTTGGCTAAGTATTGAAGAAGTTAGTATTGTCTGAATTCAGGGCATGAAATCTGTAAAATGCTGGAAAAATGATAGTGTTTTTTTTTTTTTGGAATTCCAAGGTTGAAATTCATGAGCTCGAGGTTCTAATGCTTAGTTTTTGTTTGTTTGACAGGCCAAGAGGAAATAGGTCGAGTGTACGGGCCAGGGTTCTAGTTCTAACACTGTGAGTGACAAAACGAACCTCCAAAACAATCTTTATGCTTGAATTATGCTTAAGGAAGTACAAGGTTTTCCTAGAATGAAATTACTTAGATGCTTTATGTATTCTTTGAACACATCTTTATGAGCATACACGTTTTCCTAAAAATAATTTCAAGTGCTCGTTGTGAGCCTAGATTTCTCGATGAAATTTATATGAGAACATATGTTTGTTGGTTACTGAAATTTAGTGAAAATGTTATGATTTCGAGCAAGCATGTACTAGCAAGTATGATTTAAAGATTTCCAGTTTTTATGAACAAGCTGAGTAAGCTTGACTTTTACGAAAGGAAAGATAAGCAGACATATTCAAATATTTTTATGTGATTTTCTGAGACTTGATTGAGTAAATGACTAAGCTATTGAGCCCGAGGTTGTATAGTACCGTGTGCGCACAGGTCATATTCTGTTGTCGACGTTGAGTGTACTCCGTGACAACAATGCTGCCGTGAGTGCTGGGCGAGCCCCACTCCGATAAACACGATGGGAGTGCTGGGCAGGCCCGACTACATCGTAGAGTATACGTTTGTTGTACTGGGTATACCCTACACTACGTAGATTTTCATATGTTCTAATATTATCGATATGCCTTGCGGAATTTAAATGTCATGCTTGTTGGATTTTTGAAAATCTATTATGATTCCACGTTTATTTTTAACGGTTGTTTACAGATGCATATGCTCATGAGTTTTCAGGTGATATGTTTTACGAGTTCTAGATTTTAAACTCAGTCACTCACTGAGCTTCATAGCTCATTCTTTCAGTGTTTTCCAAACCTTTCAGGTAGAGATCGAGCTCCTGGTACCTGATATACTACCATTGTCTACTAGAAGCTCCACGAGCTTGATATTTTGTACGTGGGTGGAGTTGTATAGCAAGTCTATATGTGTCTAGTTTATTTTGAGAGGACTATGAAGTTATAATCGTGTGTACATTAGAGGTTGTATAAACAATAGTTTGTCTTGATTCTGATTGTGATGCTTTTGGTCGTTTTAGTTTTTAAGAGACTTAAGAAGAGTTTCTCCTTATGTATGTTTAGTAGATGTCAAGTTTTCGCTGTGTTATGTTAAAGTGTTCCATAGGCGAGCATAGTATGTTTATCAGATTAAACATGGTCAACAGGTATTGTTAGAAGGTAAACAATGTTTGTTGCCTTCATGTCGTCTTTCAGGCTAAGTTAGTTGGTAGTACGGGAGGGGGTGTGACACCTTAAGTCCCACTGATCCTCTAATGAACAATTGGTTTGTGATCCAACTAGCTAACCAAATCCCTCTCGGGCCAATGAGAGGGGCGGGCCCTTTGTTCAAGACCCGGAGTCAGCACTTAAGGGAACAACCTCTCTACTAATCCCTAAAGAAGGTAGGAGTGAATTCCATCTTGCAAAACTATGTTCTCAGCTATCTACCCAGACTTATCCCTGAAATGGGAGGCTTATTGACTGGCAGTCTCAAGCTACTCTCACCCATGCAAATCTTAGGATAATATGAATAAACAGAAGTTCATAGAACGCTTAGGATTAAGATCGAGTTACCTAGGTCATCGTATGAATATACTCAGTTAAGACAATAAACGGAGTTATAAAGTCTAAGTGACTATTTCGCGGTCCAGTTTTATGCAAACTCATTGCATAGAATGCCCCCACTCGCATGTCTCCACATGAACGATTTAGGATCATATCGTTTGTACTCTACAAAGTGGGTCGCGCCCATAGTGTCCCCAGGATAAGGTATTCAACCTTATCCTTATTCTATAGACCGTTCTGGCTATAACTTGAACTTGATCCACTTTTATGTCACACATAAAGTTCAAATATTCATCCTATAACCAAAAGTTCTTTATTGGATTAGGATTACACAATACACAATTCACGTTATTCAAAAACATCTTTACTGAATAAATATCAATAACATCTTTATTGCTAAATAGAATATACATTCAGTTTACAAAACCATGAATTTTAGAACATAAAACCCAACAGTAATAACTGAGGAATGTCCTCAGATCGCTGCTCAAAACAGACCTCAATCAGTTAAGGATGCGTATTGTAAACCCGAGAATCATTCTTTGGAATTTTCTATTAAAGAAAGAAAACAAAATAAAAGAAGAAATGAATGCTTAAAACTTGGTTTTCCTTATTTCAAAAAGAAAAGAAATGAAGTGAAAGATAAAAGAAAACAAGGAAGGAAAAACATAAACCATTTTGGTTTGGTTGGCTCTAAGAATAATGAAGGAAAGAAAATGAAAGCTATGGTTATTATATTATGTTATGTTTAGAAAAGAAAAGGAAAGAAAAGGAAAGAAAAGAAAAGAAAGGAAAAGAAAAGAAAAGGAAAAACAAAGAAAAACAAAGAAAGGATGGTGGATGGTGGGACCCCACCTAAGCTTCTTCTTAAAAACAAAGTTTCTATCGATCTTCTTCTTCATTTTATCAAAAGAAAGGTAAGGGTTTCGTGGGAGAAGCTTAATGGAAGAGGAAGAAGGTTGTTTTGGTGCTGGAATTGCGAGAGAGAGGGGTGAACTCAAAGTTTGATTATTTAGCGACAAGGTGAGCAACTCCAATCCTATTCTGGTTTTCTGTTCATCTCGAGCTCCACAGGAAGAGGTAAGATTTTAGATTTTGTTTCATGAAAGTTAACTCATATTGGAACAAAATTCGTGAAGGAAGCTCGAGCAAATTCGGGTCTTAAGCTACTGGTTTGTGAAGAGGAAGACAGAAGACAGAATTTGCTGTCAAATCCGAGAAGTCTCTGATGTTTTTGTTGTACTGGTCTGTAGAATTGGAATCAGAAGCTCTATTAGGTATGGTTGGAAAGCTTATTGAATTTCCTACAACTTTCATCAAGAATTCGTGAATAGAAAATGATTGGAAGATGTTGTAAATAGCAGGTCAAGTTTCAGGTTGCAGCAGAATATTGAATCTGGATTAGCAGAAGTTAGTTCCTGAGAAAGAAGCTTCCGAGGTATTTCTGAACCAATCTATTGGGAATTTCAATTTCATGTCTTCATATTATATTTAGAGGATTCAAAAAGGAAGAGTTTGGTATAAATTTCACCCTGTTTGGCTAAGAAATGAAGAAGTTATGGCTGTCTGAATACAGGGCATAAAATCTGTTAAATGTTAGAATTTTTGTTGGAGTGTTTTCTTGTAGTTTTAAAGTTAAAACCATGAGCTCGAGGTTCTAAAACATGGTTTTTGTTTGTTTGACAGGCCAAGAGCGAATAGGTCGAGTGTACTGGTCAAGACTCTAGTTCTAACACTGTGAGTGACAAAACGAACTTCGAAAATGAGCTAAATGCTTGAAAAATGCTTTAAGAAATGCAAGTTTTGCTAGAATGAATTGTTTCAAAGCTTTGTGTTTTATTTTTGAACACATGACTATGAGTATTCTTGTTTTCCTAGAAATGTTTCAAGTGTTCATTGTGACCCTAAAAGTCTTTATAAAGTTTATACATGAGCATATGTCCAATGGTTGCCAAAATTTATGGAAATGTTATGATTTCAAGCAAGCATGTACTAGCAAGTATGTTTTAAAGATTTCCAGTTTTATGAACAAGCTAAGTAAGCTTGAGTTTTATGAAAGAAAGGATAAGCAGGCATGTTCAATGTTTTCATGTGATTTTCTGAGATATTGAGCCCGAGGCTTTATGGTACCGTGTGCACACAGGTCTTATTCTGTTGTCGACGTTGAGTGTACTCGTGACAACAAATGCTGCGTCGTGAGTAATCGGGCGGGCCCCACTACGACAAAGACGATGGGAGTCTTTGGCGGGCCCACTACATCGTAGAGAATAAACGTTGGTGTATCTTGGCGTGCCCTACACAACGTAGATTGTGACATGTTTTAAAAAGAGTTTATATCATTTACATGCCTTACGAGATTTTAATTCGGATCTCTTCTTTGGTTTTCATGAAAAGCTATAATGATTACACGATTACTTTTAACGCTTGATTACAGATGCATATGCTCATAGATGGCCAGGTGATATGATTTACGAGTTAATAGCTTTCTTTTAAACTCAAGTCACTCATTGAGCTTCATAGCTCATTCTTTCAGTGTTTTTCCCACTTTTCGTGTAGAGAGATCGAGCTCCCGGTGCACGATAACTTTGCCATAGTCTGCTGGAAGCTTCTTAAGTTTGATATGTTGTACGTGGTCTGGTCTTTGTATAGCAAGTCCATATGTTTGTAAATTATTTTAAGAGAACTATATAGTTATAGTCATATGTGCTTTAGAGGTTGTGGTTGTTTAAGTAGTGGTTTGGACTGTTTGTGGTTCTGATGTTCTTGCTCGTTTTAGTTTCCAAGAGAGTCTTAAGAAGAGTTTCTCCTCATGTACGTCTTATAGATGTCCAGTTTCATTGTGTTAAGTTTAAAGTGTTCCATATGCAAACATAGTTTGTTTTCGGAGTAAAGTAGTGTCGTGAGTATTGTTAAGAGGTAACAATGTCTGTTGGCTTCATGCCGTCTCCCGGGCTAAGTTAGCAAGTGGTTTGGGAGGGGGTTTGACACGTATGGCCGCTGGTCCAAGACCAATGAAAAGGCCAAGGCCTAAATCCTGGCTAGCATATCTGATGTTTTGGCCAGGAAGTTGGAGGGAATGGTCTCAGCTCGTGAAATCATTGGTTATCTGCAAAATTTGTATGGACAACCGTCTGAACAAATTTGGCACGAATCCCTCAAGTACGTTGAACAAGACCTTTAGATCTAAAACTCAAAAACCCCAAATCTAGATGATTTCATCCCAAGGAAGAAGATAGAAATGGATTTACCTTGATGATCAAGATCAAGAGTAGAGAAAACTTGTTTCTAAACTCAATCCACAAGTAGTTTGATTAACGCTACTTGAATGATCCTAGCATGCAAATCTAAACACAAGATATGCAAAGAAACAAGCTCATGGCTTAAGAAGCAAAATATGCAACTTTTCATTTAAAACATGATTCAAAGTCTCCCTTTTTACAATACATCTTAGATTGCTTTATATAGCCTTCCAATTGTAACCTAAAACTAAGCTAACATGACATGTTTGAGAATGTAACTTCCCTAACTTTAATGTCATAACCATCCACTACTCAAATGTAACCTAAAACATTGGAAATAGAAACTTTAAAACTGAAATTACAAGTAAATGAGGTATAAATCCGAGAATTTAATCTTCTAACAACAATTCTAGTCTTTGTAACCTCCCAAGGTGTAAATGAAGCTCCACTTGAAGTAACTTGAAGTGTAGTCCCATTAATTGATGATTGACTTGATTAAATGAAGCTTGAGATGCACTTAATTTCATTTAATTGCAACTTAAGTTCTTTCAATGCAACTTGACTTCAACTTTAATGAAACTTGAGTTCATCATAAATGAAGCCTTGATGCATTTAATTCAACTCCATTTTTAGCTCTTCTTTAGTCTTGACTAGCGTTGTAGGATTCATATCAGCGCGCATGAAGGAGGGAACTTCAGTGAGAGAACATGTTTTCGATTTGATAGTTCACTTCAACGTGGCCGAAATGAACAGAGCGGTCTTGGATGAGCAAAGTCAGGTATTGTTTATCCTAGAATCTCTTTCGAAGAGTTTCCTGCAATTCTGCAACAATGCGGTGATGAACAAAAGGGAGTATAGCCTGACTTCGCTCCTAAATGAATTGCAGACTTACCAGTCTCTTATGGATAATAAGGGACAGGTTGATAGAGAGGCAAATCAGTTTGGCCATTCCAAAAGAAGAGGATAGGGGGATAGGAGACTCTGGAACCAAGCCCTGCGGTTCTTCTTCTGGGATTAAGAAGACTTCGAAGAAGAGGATAGGAGGAAAAGGGAAAGCTTCTCCTACTGCAGACAGTGAGCTCAAAGAGAAGAAAGACAAATGCGATTTACTTATTCTTGAAACTAGTTTAGTGGAAAGTGATGACTTTACCTGGATCCTTGATTCAGGAGCCACTAACCATGTTTGCTCTTCTTTACAGGAAACTAGTTCCTTCAAAGAGCTCGAAGAGGGTGAGATGACGCTCAGGATCAAAACAAGAGACGTCGTCTCAGCTCGTGCAGTGGGAGATGCCAAGCTGTTTTTTTTTAGAGATAGATTTTTATTATTGAAAAATTTCTATATAACCTAAGCTTAAGAGGAACTTGATATCTATCTCTTGTCTAATTGAATGTGGATATTGTATTTCTTTTTCAATTAATGAAGCGTTCATTTCGAAAAAGGGTGTCAATATTTGTTCTGCTAGATTAGAAAACGGCTTGTATGTACTTAAACCGAACCAAACTAAAGCAATTTTAATTCATGAGATGTTTAAAACTGCAAATACTCAAAGTAAAAGGCAAATAATTTCTCCAAATAATAATACCTTTCTTTGGCATCTTAGACTTGGTCACATAAATCTCAACTGGATTGAGAGATTATCTAAGAATGGACTTCTAAATATGTTAGAATTCTCTACCTCCTTGCGGATCATGCTTGGAAGGTAAAATGACTGAGCGACCTTTTACTGGGAAAGGTTATAGAGCCAAAGAACCCTTAGAAATTATATATTCGGATTTTTGTGGTTCGGTGAATGTTAAAGCTCGAGGAGGGTACAAATATTTTGTCTCTTTCATAGATGATTATTCGAGGTATGGTTGTCTATACCTAATGCATCATAAGTCTGAGGCTCTTGTAAAGTTCAAAGAGTATAAGGCTGAAGTAGAGAATGCATTAGAGAAAACCATTAAGACACTTCGATCCGATCGAGGTTGAGAGTATATGGATCTAAGATTCCAAGACTATTTGATAGAACATGGAATCCAATCTCAACTCTCGCCACCTAATACACCTCAGCAGAATGGTGTATCTGAAAGGAGAAATAGAATCTTGTTAGACATGGTTTGATCTATGATGGGATATGCTCAGTTGCCTGCCTCATTTTGGGGTTACGTAGTAAAGACTGCGGTTCAAATTTTGAACATTGTTCCATTAAAGAGTGTTTCAGAAACACCTTTTGAGTTGTGGAAGGGGCGTAAACCTAGTTTACAACACTTCAGGATTTGGGGTTGTTCGACACACGTGGTCGTGACAAACCCAAAGAAACTGGAACCTCGTTCAAGATTATGCCAGTTTGTTGGCTATCCCAAAGAAATGGGAGGTGGTCTTTTCTACGACCCACAAGAAAACAAGGTGATTGTATTGACAAACACCACTTTATTGGAGGAAGATCAAATAAGGAACCATAAACAACGTAGTAAGTTAGTATTAAATGAAGCTACAGATGAGTCAACAAGAGTTGTTGATCAAGCTGGATCTTCATCAAGAGTTGATAAAGAAGTCGGCACATCGAGTCAGTGTCGTCCTTCTCAATCATTGGGAATGCCTCGACGCAATGGAAGGGTTGTTTCCCAACCTGACCGTTACTTGGGTTTAGCTGAAATTCAAGTTGTCATACTTGATGGCGGTATAGAGGATCCATTGTCCTATAGGCAGGAATTGAATGACGTAGATAAGGACCAATGGATTAAAGCCATGGACTTGAAATTGAGTCAATGTACTTCAATTCAGTTTTGGAGCTTGTAGACCAGCCTGAAGGGGTAAGACCCATAGGGTGCAAATGGATCTATAAGAGAAAGAGAGATGCAACCGGAAAGGTACAAACCTTTAATGCAAGACTTGTAACAAAGAGTTTTTCCCAAAGGGAAGGAGTTGACTATGAGGAAACTTTTTCCCCTGTTGCTATGCTTAAGTCTATAAGGATACTCTTGTCCATAGCCACATTTTATGATTATGAGATTTGGCAAATGGACGTCAAGACTGTCTTTTTGAATGGTAATCTTGACGAGAGCATCTATATGTCTCAGCCGGAAGGGTTCATAACCCAAGGTCACGAGCAAAAAGTTTGCAAGCTGAATCGATCCATTTATGGTTGAAACAAGCATCCAGATCTTGGAACATAATATTTGATACTACGATCAAGTCTCATGGCTTTAACCAAAACGTTGATGAGCCTTGTGTTTAAAAGAGGATCATCAATAACAAAGTAGCTTTCTTAGTACTTTATGTGGATCATATCCTACTCATAGGGAATGATGTAGGATACCTAACTGACATAAAGAAGTTGTTGGCGACCCAATTCCAAATGAAAGATTTGGGAGAGACGCAATATGTTCTTGAGATTCAATTGTTTAGGAATCGCAAGAACAGAACGGTAGCACTGTCTCAAGCATCTTATATCGACAAAATGTTGTCCAGATATGCGATGCTGAATTCCAAGAGGGGCTTATTACCCTTCAGGCACGGAGTTCATCTGTCTAAGGAACAATGTCTTATGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCTGCAGTAGGTAGCTTAATGTATGTTATGATGTGCACGAGGCCAGACATTTGTTATGCAGTGGGAATAGTCAGTAGGTACCAGTCCAATCTAGGGTTAGACCACTAGACTGCAGTTAAAAATATCCTCAAGTATCTTAGGAGAATGAGGGATTATACGAAGTATGGGACTAAGGATTTTGTCCTTACTGGATACACTGATTTTGATTTTCAGACCGATAAGGATTCCAGGAAATCCACATCGGGATCAGTTTTCACCCTTAACGAGGGAGCTATAGTATGGTGAAGCATCAAACAGGGATGCATCGCTGACTCCCCGATGGAGGTTGAGTATGTTGTTGCTTGTGAAGCAGTTGAAGAGGTTGTTTGGCTAAGGAAATTCCTTAATAATTTGGAAGTTGTTCCAAATATAGAATTTCTCATCACCTTATATTGTGACAACAGTGATGCGGTAGCCAATTTAAAGGAACCTCGCAGCCACAAGCGAGGCAAACACATCGAGAGGAAGTATCACTTGATACGAGAAATAGTGCAACGAGGAGATGTGACAGTCACGAAGATCGTTTTGGAGCACAACATTGTTGATCCGCTTACAAAGACTCTCACGGCTAAAGTGTTCGAGGGTCATCTGGAAAGTCTAGGTCTACGAGAAATATACATAGGCTAATCTAGGGCAAGTGAGAGATATGTAATGGGTATATGGATACCATAGTTTATTGTATTTTATATCTCTGTAACCACTGTTTTAGATTGTAATGTACCCCACTAGAGTTTTAGTTCAAATAGGAGTTTGTTGGGATTTATGCCATAAAACTCGTATTTGTAAATTTTGTTCTAATTATTGTAATAAAGAGTTATTATTTTCAATAAAGCGTTATTGTTCTTGCCCTTGTTTTAACCCTAAATCCTATAAACTAACATCCAAGGTTGTAAAATGTCTCTTTAACTGAATGTAGTGTACATATAAAGGATCTCAGTTCGAGATACAACCTAAAGGGTCTAGTAAGGGGATAAGGTTTGGGTACCTTACCCTGGTAATGCTATGGATATGACCCACTTTGTATATGATACAAATACAGTGATCCTAGCGTGTTCGTGTGGATGACATGTGAGTGAGGATATTCTATGTGATGAGATCGCATAAGACCGGACCGTGAAATAGTAACTGATAAATGTAACTCCGTTCACTAGTTGAGTTTCTATTTCACTAAGATGACTTAGGCAACTTGATCTCAATCATGAGCAGGTTACGAACTCCTATTTGCGTGAGATTGTCCTTTGACTAGTATGAGTGAGAGTGGCCAGATTCGCCGACACAATATGCCTACCTTCTTGGGGACAAGACCGAGTGAGCGGCTGGGGACTTAACTTAGCAAGATGAAATTCACTCATTCCCGCCTATTAGGGTAAGTAGAGGAATGTTCCCTTAAGTGGTGTCTCCGGGACTTGAACAAAGGGCCCGACCCTCTCATTGGCCCAAGAGGGACTTTTGTTTGTTGGTAGGACAACAAACAAATTGTTCATTAGAGGAGCACTGTAACTTAAGGTAAAAGATGTAACCCAGGGGTAAAACGATAATTTGACCCAGCTGGTGTTACAAACATTTTTGAAGGATTGACTTGTTGTTATTGGTCAATATCCGTAGATACAAAATATATCTGTAGTGAGAAGAGTGCAACTGTGAGACTTTATTGAAGTGTTCCCGCAGTTAACGAATGTTGATTAGGAGGTTAATGAGATTAACCGAGTAATCTCGTATCGTTGGAGCTTCTGATCTGTAGGTCCATTAGGTCCACCTTCTAGCTCGTAAAGGGTTCTTAGATCGTTTGAATTTGAAATGTTCAAATTCAATTAGGGAACATGTATATAGATACATTATAATATAAAGTTTGGAAGATATTATAAATTTAATGTGAATATGATTCATATTAAATTATATGAGAGAATTAAATATTTGAAAGAGTTCAAATATTAATTTAAATATGAATATGATTTATATTTAAATACTATAGGTTAAAATTTAATGTGCATAAAATGTGCATTTTTAGGTTAGAGAGAAAATTGATTAAATGTGATTAAATCAAATTTTAATGTAATTAAATTGGTTTAATTATATTAATTTTATTAATTAAATAAAATAATAATGAAGGAAATTAAACTCCCACATAACAGAAGACGATTGAATCGTCGTGGTGAAGTTGTGCTACTATTGTTTCGTTAAAATGATTTAACACTTAAATCTAGGCTAAACATGCTTAAATGGAAAGGAAAAACAGGATGTACTTACTTGTTGAAGACCCTCTTCAAAATCCTTTCCAGATTCACGAATTCTTCGTGTGCTCCTCGATCTCTACAAACTCGAACTCTTCTCACGAACAAGAACACCACCAATGGCTTCTCGGTTATGCTTCTTTTGGAAGAAGGAAGTTGGTGGGAACTTTTGTTTTGGTGAAGGGAGGAGAGGAATTGAGAGAGAATCGAGAGAGAGCTTTCTCTTCTTTTTGGTGAGAATTCCAAAAAATGAGAGAATGACTTGCATTCCTTCTTGCAAGAAGGGTTTATATAATGGAGATAGGTGGAGTTGAAATCTCCACCTATTTACCATTTTACCACAACTATAGGTTATGCAAATCATATTTGCATAACCATATATTATAAGATATCCCATATCTTATATTACAAATCACATTTGCAATATTGTGAATTTATTAAATTGAATCACATTCAATTTAATATCTCTCAACCTAATTTCTCCAATTAGCCCTAATCCAACAATTAGGCTAACCTATAGTTTATTATGAATATCATTCACATTAAACTATATATTATATCATTCATATCTCATATAAATGACATAAATGCCCTTTAAGTGAAATTGAACACTTCAATTCACACCAAAACATTAACCCTTCTTTTAACCCAGATTGAGCCAACCGAGGGACCTAATGGACCTACAGTGACGATCTCCAATGATCCAAGATTAACCTATCAAACTCTTTGACCCGGTTAATCAACATTCATTAGCTACGATAACACTCCACTAAAGTCCGTAGTTTGCACTCCGTCGATCACGAGAATATTATGTGTCCACCGATATAACCAATGCCCATGAGTCGACCCTTCACAAAGTTGTTCGTGAGACACTGTGTTGGGGTCAAATTACCGTTTTACCCCTGTGTTTACTTCTTGCTCCTTAAGTCCCCACTGCTCCTCTAATGAACAACAACGTTGTAATGGTCCAACCATACACAACAACTCTCTCGTGCCAGTGAGAGAGTGTGATGTGAATCAAACCATTGATCCATTGCATGTACCTGAAGGAGCAATAACAAGGAGCAAGGCCAAGAAGATTCAAGAGGCTTTCACATTGCATCTCCAAATGCTCGTGAATGCACAAGGAGAGACCAAGATTTTTTAGCCCAAAATTCTTTATAATGTTAGTACAACAAGTCAAGATGAGAATGGAGTGAAGATGGCACGGAAAAAGTTGTCTAGTTTGAAAGATGGCACGGAGGACAAAAAAAGTGTGCAGAAAATGTGAATAGGTGGCTGTCTAGATTACACCTCTTGGGATTTCGTGATGTCAAACCTCGTCAAACAAATTGTCATGCATGGTGGATCCTACAGTAGATAATTAAGACCATTTAAAGCATTTCTATATTTTTTGTTCCATATTTAGAGCTCTCAAACGTTGTGCAATCAAAGTTTTAAATTCCTAAGTCAATTTTTTCTTCATTTTACATTTAATGTTTATTGAAGACTTTTGGTCTTTAGTGCTTTGCACGACCATTTTGGCCTATTTAAAGGCTTGTATTGGCATGGAAAAGGCAGAACCTTTATGAAAAAAACTTGTGTTTTGTTTAGCCCCATTTGGTGTTAATTTTCTTTCAAAACTTGCTTTAGGTTTGATGTTTAACCGATTCATTGGATTAGCCCCGATCAAGCTAATTCTTGAGTGAGTCGTCTTAGGATCTAGGAGTGACCATCCTTATTCTATGTTTGATCTAAGAGTGATTCATCTTCTAACTAAACTCTTGGTTGGAATCAAGTCGTTTATTAGCCTTGTTCGTGACGTTTGCAAAGATCCTAGAAGGACCTCTAGCTTTGTTAAACCAACAAGTTCGGCGCTTATCATTTGGTATCAGAGCTCGTTGGTCGACATCCTTTGGTCGGCTCTCTAGAGGTGAAATATCTACAATTTGTGTTACTTTTTTTCTGTCATTTTTTTTCGTAAGCATTTACAAAGTGTAACACAAGGCATTCTACAACTTGTCTTTAATTTCTTTGTATTTTGTTCTTTGATCATAAAAAAAAATCAGTAGCAAAAAGTTAAAAAAAAACAGTAGCAAAAAAAAAAAAAAAGAGGTAATCATCCAAGGCACACAAAAGTTCTTGTTTTTGAATTGTATTGACTCAAACTTTGAGTTGTAGATCCTTAAGATCAGTTTCTCTAGTCTTAGCTTGTGAAAGGTTATCATTGACTTAGTTTTATAATCAAGTTGAAAAGCAAGGTTGCACCAAATTTTTTTAAACCAACCCTTACATCTTTGACCTAGTACCAAAAGCCTACCCTTGAGTGATAAACACGAGTGTCCTTGAGTGATATCTTGGTGAGAAGTGTGGAGAGGTCCTTATAAAAAAAAATGTCACAAGATAATAAAGAAAAAGTTTCGCAAGTGGTAGATCCAAATATGGCTATTCTTCAAGCAATTCAAGGTATGATGGAGATGATGAGGGAAGAAAGGGAAGAAAGGAGAGCACAACAACAAAGAGAAGAACGAATCTTGCAAGAAGATGAAGGCATGTTTGATTTACAGGTACAAGAAAGAAATGTGAGGGGAAGAGGAAGACATAACATTGCAAACATTGTGCAACCTAGAAGAGTGTGATAAGCGCCGAATTTGTTGGTTTAACAAAGCTAGAGGTCCTTCTAGGATCTTTGCAAACGTCACGAACAAGGCTAACTTAACGAATTGACTCCAACTAAGAGTTTAGTTAGAAGATGAATCACTCTTAGATCACACTTAGAATAAGGATGGTCACTCCTAGATCCTAAGACGACTCACTCCAGAATTAGCTTGATCGGGGCTAATCCAATGAATCGGTTAAACATCAAACCTAAAGCAAGATTTGAAAGAAAAGTTAACACCAAATGGGGCTAAACAAAACACAAGTTTTTTTCATAAAGGTTCTGCCTTTTCCATGCCAATACAAGCCTTTAAATAGGCCAAAATGGTCGTGCAAAGCACCAAAGACCAAAAGTCTTTAATAAACATTAAATGTATAATGAAGAAAAAATTGACCTAGGAATTTAAAACTTGATTGCACAACGTTTGAGAGCTCTAAATATGGAACAGAAAAGATAGAAATGCTTTAAATGGTCTTAATTATCTACTATAGAATCCGCCATGCATGACTATTTCGTTTGACGAGCTATGACATCACGAAATCCCAAGAGGTGCAATCTAGACAGCCACCTGTTCACATTTTCTGCACACTTTTTTTGTCCTCCGTGCCATCTTTCAAACTAGACAACTTTTCCTGTGCCATCTTCACTCCATTCTCATCTTGACTTGTTGTACTAACATTATAAAGAATTTTAGGCTCAAAAATCTTGGTCTCTCCTTGTGTATTCACGAGCTTTTGGAGATGCAATGTGAAAGCCTCTTGAATCTTCTTGGCCTTGCTCCTTGTTATTGCTCCTTCAGGTACATGCAATGGATCAATGGTTTGATTCACATCAGGTAAGTTGTAAACCCAATCTCTTTGGAATTTCCTTATTAACAAACAACAAGAAGAAAGAAGAAATGAATGTTTAAAACTTGGTTTTCCATGTTTTAAAAAGAAAAGAAATGAAGTGAAAGACAAAAGCAAAACAAGGAAGGAAAGTTTAAACCATTTTGGTTTGGATTGCTTTAAAGACAAAAGAAGAAAAGGAAATGAAACAAATGTTTAATATATTAAGTTTTGTTTTGGTAAGAAAAGAAAAGAAAAGAAAGAAAGGGATAAAGGAAAGGAAAAAGGAAAAGCAAAAGGGGAAAAAGACAAATTTGTCTTTTCCTCCACCGTTTGCTTTTTAGAAAAGCTTTATCTTCTCAATTTTCTTCTTCATTTACCGAAACCAAAGCTGAAGCTTCGTGGGAGAAGGAGAAAGGAAGAAGAAGGAAGTCATTTTCGTGATTTTGGAGCTGGAGTTGCAGAAGAAAGGAGAAGAACTCAAGGGAATTATTATTGCAGCAAGTTCTGATGTTTTGGCCTTTTCGAGCTCAACAAGAAGAGGTAAGAGTTGCGTTTTTGATACATGAAAGCTAACTAAATTCGGAACAAATTTCGTGAAGGAAGCTCGAGCTAATACTGAAGTTAACTTACTGTTTTGTTAAGAGGAAGACAGAAGACAGAATTTGCTGTCAAATCTGGGAAGTCTCTGATGTTTTGGTTGTTCTGATCTGTATTCTTTGAGTTAGAAGCTCTAATTGGTATGGTTCGAAAGCGTATTGAATTTCCTACAACTTTCGTGAATAAATCATGAGTAGAAAATGTCTAGAAGATGTTTTAAATATCAGGTTAAATTTGTTGTGCAGCAGGAAATCCGAATCTGGAAACAGCAGAAGTCTGTTTTGAGGAAAGTAGCTTTCGAGGTATTTCTGAAAAACGCCGTTTGGATTTTAAATTTCATGTCTTCATATGATTTTTAGAGGGTTCAAAAAGGAAGAGTTTGGTATAAATTACATTATTTTTGGATAAGTAATGAAGAAGTTATGGTTGTCTGAAAACAGGACAGAAAATCTAAAAATGCTTGAAATTGGAAAGTGTGTTTTCTTGTAGTTTTAAGGTTAAAAATCATGAGCTCGAGGTTCTAATGGTTGAGTTGGTTTGTTTGACAGGCCAAGAGCAAATAGGTCAAGTTTACAAGCCAAGGTTCTAATTCTAATACTGTGAGTGACTCTATTTTAGAATTATGCTTGACCTATGTTTTTCTTCAAAAACATAATTGTTGATCATTGAATCTTGTTTGAACTAATTATGTATAGCTTCATGGAGTTTCTAACATAAAGTTCATGATGGAACCTAAGCATGTCTTGAATTAGTTGTAACTATAAATCCAAGTATGGAAACTAAATTATGAAAGTATGCTTTCCTTTAGAGAATGTTTTGTGTAAATCCACTTGGGAACATGTTTAGATGATAATGTGAAAATATCAAGAAATTGTTGTATGTGTTATAAAGACATGATTTCCATGGTACACAAATTATGCCCTTGTTTGTGGTTAACCCCTAATACTGAAGGACATTCGAGAAGGTACTTAGGGGGGGAAAGAATCATGATATCCCGATACTGAAGGACAATGAGAAGGTATTCGGGTAGTAAATGGTTTTACCTTAATACTGAAGGACAATGAGAAGGTATTCGGGTAGTAAATGGTTTAACCTTAATACTGAAGGACATAGAGAAGGTATTAGGGAAAACCAAACGACCAAAGGTATTCCACGTGCACGTGAGAGAGAGAGAGGTATGAACCTTATTGGTATAAATGTAACTCTACCACCTCTATGGTTTAATGTGGTATCATGTCATGTGTTTTATTGTTATGAGCTTCTATATTATTGATCTATCTACCCTCAATATGATAGTACATTTCGAGTTGTGTGCTATGCATAAGTGGTGACTTAAACCTGTAAATTGGAAGCATGGTTTGTTTGTGTTTACAAACAAATGTTAAGCTATTTACTACTTATAATCTGCCATTATTATGATTCACCTGTGAGCTTGTAATGTTTTAAAGATAGACACTCACTGAGCTTTTAGGCTCATTCTTCAATGTTTTCAAACCTTTTCAAGTAGAGATCAAGCTCCTAGTACCTGACATCCTGCTATAGTCTGCTGGTAGTTTCATAAGTTGGTATTTTGTATGTGGCTGGTGTTGTATAGCAAGTCGTTGTGTAGTTATAGTTGTTTGTACATAAGAGGTTGTATAAACAGTGGGTTGGCTTGTTCTGGGTTGTGATGCTATTTCTCGTTTAAGTTTTCAAATGGGAGACTTAAGAAATGTTTCTCCCTATGTATGTCAGGTACTTATCAAGTTTCCGCTGTGTTATATTAAAGTTTACCATATACGAGCATAGTATGTTTATCAGGTAGAACAGGTCATCAGGTATTGTTAAGAGGTGAACAATGTCTGTTGGCTTCATGCCTCTTTTCGGGCTAAGTTAGCAGGTGGTTCGGGAGGGGGTGTGACAACTTGGTATCAGAGCAGTTAG

mRNA sequence

ATGGTTAAGGAAGGAATTGTGTTAGGACCCAAGGTGTCAAAAGAAGGATTAGAGCCAAGAGGAAATAGGTCGAGTGTACGGGCCAGGGTTCTAGTAGAGATCGAGCTCCTGGTACCTGATATACTACCATTGTCTACTAGAAGCTCCACGAGCTTGATATTTTGTACGTGGGTGGAGTTGTATAGCAAGTCTATATGTGTGAACAATGTCTGTTGGCTTCATGCCTCTTTTCGGGCTAAGTTAGCAGGTGGTTCGGGAGGGGGTGTGACAACTTGGTATCAGAGCAGTTAG

Coding sequence (CDS)

ATGGTTAAGGAAGGAATTGTGTTAGGACCCAAGGTGTCAAAAGAAGGATTAGAGCCAAGAGGAAATAGGTCGAGTGTACGGGCCAGGGTTCTAGTAGAGATCGAGCTCCTGGTACCTGATATACTACCATTGTCTACTAGAAGCTCCACGAGCTTGATATTTTGTACGTGGGTGGAGTTGTATAGCAAGTCTATATGTGTGAACAATGTCTGTTGGCTTCATGCCTCTTTTCGGGCTAAGTTAGCAGGTGGTTCGGGAGGGGGTGTGACAACTTGGTATCAGAGCAGTTAG

Protein sequence

MVKEGIVLGPKVSKEGLEPRGNRSSVRARVLVEIELLVPDILPLSTRSSTSLIFCTWVELYSKSICVNNVCWLHASFRAKLAGGSGGGVTTWYQSS
Homology
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BLAST of Tan0002281 vs. NCBI nr
Match: KAA0037581.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 74.3 bits (181), Expect = 6.3e-10
Identity = 46/91 (50.55%), Postives = 52/91 (57.14%), Query Frame = 0 

Query: 31  LVEIELLVPDILPLSTRSSTSLIFCTWVELYSKSI-----------------CV------ 90
           LVEIEL VPDILP S  SS S    TW+ELY +S+                 C+      
Sbjct: 146 LVEIELPVPDILPTSAESSRS-NSSTWLELYFESVHVEMFYKVILQTKRCQGCILWSAWI 205

Query: 91  ---NNVCWLHASFRAKLAGGSGGGVTTWYQS 96
              ++VCWLHA FRAK AGG GGGVTTWYQS
Sbjct: 206 VRGDDVCWLHAIFRAKTAGGPGGGVTTWYQS 235

[Close]
BLAST of Tan0002281 vs. NCBI nr
Match: TYK03091.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 74.3 bits (181), Expect = 6.3e-10
Identity = 46/91 (50.55%), Postives = 52/91 (57.14%), Query Frame = 0 

Query: 31  LVEIELLVPDILPLSTRSSTSLIFCTWVELYSKSI-----------------CV------ 90
           LVEIEL VPDILP S  SS S    TW+ELY +S+                 C+      
Sbjct: 146 LVEIELPVPDILPTSAESSRS-NSSTWLELYFESVHVEMFYKVILQTKRCQGCILWSAWI 205

Query: 91  ---NNVCWLHASFRAKLAGGSGGGVTTWYQS 96
              ++VCWLHA FRAK AGG GGGVTTWYQS
Sbjct: 206 VRGDDVCWLHAIFRAKTAGGPGGGVTTWYQS 235

[Close]
BLAST of Tan0002281 vs. NCBI nr
Match: KAA0054351.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYK12388.1 reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 68.2 bits (165), Expect = 4.5e-08
Identity = 50/129 (38.76%), Postives = 58/129 (44.96%), Query Frame = 0 

Query: 17  LEPRGNRSSVRARVL--------------------VEIELLVPDILPLSTRSSTSLIFCT 76
           L PRGNR S++   L                    VEI+L VPD L  S  SS S    T
Sbjct: 15  LWPRGNRPSLQTEELDKTVIFPLSTLSVLRDNDAVVEIQLSVPDTLATSAESSGS-NSST 74

Query: 77  WVELYSKSICV------------------------------NNVCWLHASFRAKLAGGSG 96
           W+ELY +S+ V                              +NVCWLHA FRA+ AGG G
Sbjct: 75  WLELYFESVHVEMFCYFTNQVISGLHLVFNVLVRSTGIVRGDNVCWLHAVFRARTAGGLG 134

[Close]
BLAST of Tan0002281 vs. NCBI nr
Match: KAA0058280.1 (uncharacterized protein E6C27_scaffold274G006090 [Cucumis melo var. makuwa])

HSP 1 Score: 65.9 bits (159), Expect = 2.2e-07
Identity = 51/131 (38.93%), Postives = 60/131 (45.80%), Query Frame = 0 

Query: 14  KEGLEPRGNRSSVRARVL------------------VEIELLVPDILPLSTRSSTSLIFC 73
           K G+ PRGNR S++ R L                  V IEL VPDILP S  SS S    
Sbjct: 74  KSGM-PRGNRLSLQTRELDKTVIFPLSTLSVLRDNNVVIELPVPDILPTSAESSGS-NSS 133

Query: 74  TWVELYSKSICV------------------------------NNVCWLHASFRAKLAGGS 97
           TW+ELY +S+ V                              ++VCWLHA FRAK  GG 
Sbjct: 134 TWLELYFESVHVEMFCSFTNQVMSELHLVFNVSVGSTGIVRGDDVCWLHAVFRAKTVGGP 193

[Close]
BLAST of Tan0002281 vs. NCBI nr
Match: KAA0037515.1 (uncharacterized protein E6C27_scaffold277G001260 [Cucumis melo var. makuwa] >TYK01990.1 uncharacterized protein E5676_scaffold808G001020 [Cucumis melo var. makuwa])

HSP 1 Score: 61.2 bits (147), Expect = 5.5e-06
Identity = 45/110 (40.91%), Postives = 55/110 (50.00%), Query Frame = 0 

Query: 7   VLGPKVSK-EGLE-PRGNRSSVRA--------------------RVLVEIELLVPDILPL 66
           VL  ++S  E LE PRGNR S++                       +VEIEL V D LP+
Sbjct: 86  VLEVRISNLENLEMPRGNRLSLQTGELDKTVIFLLLTLTVLCDNDAIVEIELPVSDTLPM 145

Query: 67  STRSSTSLIFCTWVELYSKSICVNNVCWLHASFRAKLAGGSGGGVTTWYQ 95
           S  SS S      +      +  ++VCWLH  FR K AGG GGGVTTWYQ
Sbjct: 146 SAESSGSNSRSAGI------VREDDVCWLHVVFRVKTAGGPGGGVTTWYQ 189

[Close]
BLAST of Tan0002281 vs. ExPASy TrEMBL
Match: A0A5D3BTP3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00020 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 3.0e-10
Identity = 46/91 (50.55%), Postives = 52/91 (57.14%), Query Frame = 0 

Query: 31  LVEIELLVPDILPLSTRSSTSLIFCTWVELYSKSI-----------------CV------ 90
           LVEIEL VPDILP S  SS S    TW+ELY +S+                 C+      
Sbjct: 146 LVEIELPVPDILPTSAESSRS-NSSTWLELYFESVHVEMFYKVILQTKRCQGCILWSAWI 205

Query: 91  ---NNVCWLHASFRAKLAGGSGGGVTTWYQS 96
              ++VCWLHA FRAK AGG GGGVTTWYQS
Sbjct: 206 VRGDDVCWLHAIFRAKTAGGPGGGVTTWYQS 235

[Close]
BLAST of Tan0002281 vs. ExPASy TrEMBL
Match: A0A5A7T7M6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002250 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 3.0e-10
Identity = 46/91 (50.55%), Postives = 52/91 (57.14%), Query Frame = 0 

Query: 31  LVEIELLVPDILPLSTRSSTSLIFCTWVELYSKSI-----------------CV------ 90
           LVEIEL VPDILP S  SS S    TW+ELY +S+                 C+      
Sbjct: 146 LVEIELPVPDILPTSAESSRS-NSSTWLELYFESVHVEMFYKVILQTKRCQGCILWSAWI 205

Query: 91  ---NNVCWLHASFRAKLAGGSGGGVTTWYQS 96
              ++VCWLHA FRAK AGG GGGVTTWYQS
Sbjct: 206 VRGDDVCWLHAIFRAKTAGGPGGGVTTWYQS 235

[Close]
BLAST of Tan0002281 vs. ExPASy TrEMBL
Match: A0A5D3CMM1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001700 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.2e-08
Identity = 50/129 (38.76%), Postives = 58/129 (44.96%), Query Frame = 0 

Query: 17  LEPRGNRSSVRARVL--------------------VEIELLVPDILPLSTRSSTSLIFCT 76
           L PRGNR S++   L                    VEI+L VPD L  S  SS S    T
Sbjct: 15  LWPRGNRPSLQTEELDKTVIFPLSTLSVLRDNDAVVEIQLSVPDTLATSAESSGS-NSST 74

Query: 77  WVELYSKSICV------------------------------NNVCWLHASFRAKLAGGSG 96
           W+ELY +S+ V                              +NVCWLHA FRA+ AGG G
Sbjct: 75  WLELYFESVHVEMFCYFTNQVISGLHLVFNVLVRSTGIVRGDNVCWLHAVFRARTAGGLG 134

[Close]
BLAST of Tan0002281 vs. ExPASy TrEMBL
Match: A0A5A7UT17 (CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G006090 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.1e-07
Identity = 51/131 (38.93%), Postives = 60/131 (45.80%), Query Frame = 0 

Query: 14  KEGLEPRGNRSSVRARVL------------------VEIELLVPDILPLSTRSSTSLIFC 73
           K G+ PRGNR S++ R L                  V IEL VPDILP S  SS S    
Sbjct: 74  KSGM-PRGNRLSLQTRELDKTVIFPLSTLSVLRDNNVVIELPVPDILPTSAESSGS-NSS 133

Query: 74  TWVELYSKSICV------------------------------NNVCWLHASFRAKLAGGS 97
           TW+ELY +S+ V                              ++VCWLHA FRAK  GG 
Sbjct: 134 TWLELYFESVHVEMFCSFTNQVMSELHLVFNVSVGSTGIVRGDDVCWLHAVFRAKTVGGP 193

[Close]
BLAST of Tan0002281 vs. ExPASy TrEMBL
Match: A0A5D3BSA6 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G001020 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.7e-06
Identity = 45/110 (40.91%), Postives = 55/110 (50.00%), Query Frame = 0 

Query: 7   VLGPKVSK-EGLE-PRGNRSSVRA--------------------RVLVEIELLVPDILPL 66
           VL  ++S  E LE PRGNR S++                       +VEIEL V D LP+
Sbjct: 86  VLEVRISNLENLEMPRGNRLSLQTGELDKTVIFLLLTLTVLCDNDAIVEIELPVSDTLPM 145

Query: 67  STRSSTSLIFCTWVELYSKSICVNNVCWLHASFRAKLAGGSGGGVTTWYQ 95
           S  SS S      +      +  ++VCWLH  FR K AGG GGGVTTWYQ
Sbjct: 146 SAESSGSNSRSAGI------VREDDVCWLHVVFRVKTAGGPGGGVTTWYQ 189

The following BLAST results are available for this feature:
BLAST of Tan0002281 vs.
Match NameE-valueIdentityDescription
BLAST of Tan0002281 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0037581.16.3e-1050.55reverse transcriptase [Cucumis melo var. makuwa][more]
TYK03091.16.3e-1050.55reverse transcriptase [Cucumis melo var. makuwa][more]
KAA0054351.14.5e-0838.76reverse transcriptase [Cucumis melo var. makuwa] >TYK12388.1 reverse transcripta... [more]
KAA0058280.12.2e-0738.93uncharacterized protein E6C27_scaffold274G006090 [Cucumis melo var. makuwa][more]
KAA0037515.15.5e-0640.91uncharacterized protein E6C27_scaffold277G001260 [Cucumis melo var. makuwa] >TYK... [more]
BLAST of Tan0002281 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BTP33.0e-1050.55Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37... [more]
A0A5A7T7M63.0e-1050.55Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold27... [more]
A0A5D3CMM12.2e-0838.76Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold30... [more]
A0A5A7UT171.1e-0738.93CCHC-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
A0A5D3BSA62.7e-0640.91Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
BLAST of Tan0002281 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0002281.1Tan0002281.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043170 macromolecule metabolic process
biological_process GO:0006807 nitrogen compound metabolic process
biological_process GO:0044238 primary metabolic process
molecular_function GO:0016787 hydrolase activity