
Tan0002009 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGCTTGCTCTGTTTTCAAAGAAACCCATAATGGCATCTCCACTTTGGACCAATGCGCAACTCAATTCCATTTTTCTTCTCTCTTTTGCTTTTTTGTTTCCTGTATACTTTTTTTTTCCTCCGCTGAATTTTAGATGAGCTTTCTTCTCTGTGTTTCCATGGAAGTTTCACCTGGTGAGTACGACTTTCTTTTTTTCTTGCAGTCCTTGTCTTCTCTTTTTGGCTAGTTTCTTGTTCTTGCTACTCGATGCTCATTCATTCATTGCTGAGGAAGAACTGGAGATTTTTGTTTTGCTGTACTTGCGCACAAAAGAATTTAATCTGTTCGTCGTTTTGGAATCTGTGTTGTGTGAAAATTTCGATAGAAGTTCCTTGGTTTGTGGTGTGTTGAAATAGAATGCTTGGCTCGTTGAATGTTGCTCGTCGTTTGCGTCGATTTTGCTGTTAATTGTGCCGATTGACGGTGCAAATTAAGGGTTATCCTCGATATTCAATAGCCATTTTGAATGATTGCTTTGTATTTACGCTAAGTTAATCTAAGAAGTTGGGATGAACATAAGTATCTGGTTGAAACCTCAGACTGAAATTGCATGCCAGGGCTGTTCACAACTGAAAGGGCAAACGTCTGAGGGCGAGAAAGATGCAAAAGGATAGATAAGTAGAAATTTGGAAAAAAGGCGATTTACAAGCGATGTAATTTTAACCAAAAGTTGTGTAGTCTAGAAATTATAGGAAATTCTTGTGTCTGAGGCTTTGGGAAAGGATGGATAACTGGAAATTGGTTTTTCTTGCTAGAATTTATTGATGTGATGCTCATGTTACTGCTTGGCAATTGGAAGAATCAACTCTTTTTAGTTTTTCTTTTTCTTTATTAAGCAATAACCAGGAAGAAACTTTGGAGCGTATCCTCCAAAGTACTTTTCCACGTTTCAAGTGGAAGCAAAGTAAATGGGGTTCATTAGAGAGGACAATACTTCAGAAATGCTTGCATATATAGAGCATTTTCTTTCCATTTTCATCGACAAGCAACGATAAACATTGCAACTTGTATTATTCTTACGACGCCCGGTTCCTTGCATCCCTAACTGCTTAATTTCTACTTTCATGTCATTTTTGGCTGTTTGATTGCTTCTGGGATTGCTATCTTGCTCATAGGATACACTGATATTGTTTTCATTTGACTTGTCAGGCACACATTGATTTTCTCTATCTTATGTTACTAAAGGAACATTTCATTCCTGCCCTTATGTCAAAAGTTGGAAGCATGTTTTTCTGCTGCAATTCATCAAATAAATACAAGAGATTGGATGCAAAGCTTGGAAGAAAAATGCTTGAAGTCAAAAGAAATTTAGCTGGACATGACAATTTCAAGTCAATAAATGGCATAATCTTGAGATTTCCCCAATTCAAAGAAGGATTACAAAACATCAGAGGTGTATTTGAACAGTATGGTGAGTTTCATTTTAGCTGCATCACTCTTTTTGAGTTTCTCCTGCTCAAGATTTTCTTACCATACTCTCTCTATCAGATGAAGATTCCAATGGAAGCATTGATCGCGAAGAACTCAAGAAATGCTTGCAACAGCTGCAAATGCATATGACCGAGGAGGAAGTCAAGGATCTTTTCCAGTCTTGTGACATTGATGGAAGTGCTGGAATACAGTTCAACGAGTTTATCGTTCTTCTATGTCTCATTTATCTCCTCAAGGACCAGAAATCGCCAACCGTAAGCATAAACAAACTTTTATATCTCCATTTTCATTCAGTTTTCAATCTGTTTATGTTTATCATTTTGGACATGAACATTCTGGAGGTTTGTTACAGAAATCAAAGCTGGGTTCACCTCAACTTGAAGCAACTTTTGACACAATCATCCAAGCTTTCATATTTCTTGATAAAAATGGCGATGGCAAGCTCAACAAGAAAGAAATGGTCAAAGCTCTGAATGAGGCTTCTCCATGCGAGAGATCCCCTGCACGCATTATACAAACTAGATTCAGTATTGCTTCCTTTACTAAAGATACTCCATATTGGTTTTTGTTTAATGAATCGTCTAGAAAGTTCAAATATGTCGAACATATCTGATCAAACATGGTGTCAAATACACATTCATACGAGCTAAGTAGTAGATTGACACATTAAGGTCCCATTTGATAACTTTTTTGTTTTGTTTTTGTTTTTGTTTTTGTTTTGAAAATTAAGTTTATAAACGCTATTTTCACCGATGAAATTCTTTCTTTTGTTATCTACGTTTAAAATGTTTTCAAATTCAAGCCCAAATTTGAAAATTAAAAAAAGTTTCTAAAAACTTGTTTTTATTTTTTAAATTAATTTGGCAAATAATTCAAACATTTATGAAATAAAGGTGAAATCCAAAAAAAAAAAAAAAAAATGGTGAGTCAACAAGCCCAATTTTCAAAAACAGAAAATTAAAAACGAAACCTCCCATTTGATAACCATTTGGTCTTTTGTTTTTGAAAATTGTGCTTGTTTTCTATTATTTCTCTAATGGATTTTATTTTTCTTAAGAAAATATTTGAATTCTTAGTTAAAGTTCAAAAACAAGAACAAATTTTTTAGAACTACTTTTTTTTTCTTGGCTTGGTTTTGAAAACATATATAAAAAAAAAATAGATAACAAAACAAGGTAACTCATAGGTGAGAGTAGTATATAGAGGCTTAATTTTCAAAAATCAAATGATTATCAAATGGGTTTAAACTTTCATCTATCTGAACCGTTCTGCTTTTTTATTATATATTGATTTCCCCACTTTTCTTAATGGATGCAGAGGAAATGGACTGGAACAACAGTGGGAAGGTCAATTTCAGGGAGTTTCTATTTGGTTTCATTAACTGGGTTGGAATTGACACAGATGATGACCTCTCTCTCACATGAAGTTGTTAAAACAGGACAGAGGACATCAAGACATCATATAGACATGAAGACAATGGCTTAAAAAATAAGGTCAGACTGATAATGTCATTCAAAACTGAACACTTGCTGATGATTATAGCGAGATACTACTCTTGTTTGTTTATTTCATTTGACTAATTGTAATGTTCGAACGACATTGTGAATTAGATTACATAATACTATTCTTATCGTCATTGTTGTTACT GAGCTTGCTCTGTTTTCAAAGAAACCCATAATGGCATCTCCACTTTGGACCAATGCGCAACTCAATTCCATTTTTCTTCTCTCTTTTGCTTTTTTGTTTCCTGTATACTTTTTTTTTCCTCCGCTGAATTTTAGATGAGCTTTCTTCTCTGTGTTTCCATGGAAGTTTCACCTGTTGGAAGCATGTTTTTCTGCTGCAATTCATCAAATAAATACAAGAGATTGGATGCAAAGCTTGGAAGAAAAATGCTTGAAGTCAAAAGAAATTTAGCTGGACATGACAATTTCAAGTCAATAAATGGCATAATCTTGAGATTTCCCCAATTCAAAGAAGGATTACAAAACATCAGAGGTGTATTTGAACAGTATGATGAAGATTCCAATGGAAGCATTGATCGCGAAGAACTCAAGAAATGCTTGCAACAGCTGCAAATGCATATGACCGAGGAGGAAGTCAAGGATCTTTTCCAGTCTTGTGACATTGATGGAAGTGCTGGAATACAGTTCAACGAGTTTATCGTTCTTCTATGTCTCATTTATCTCCTCAAGGACCAGAAATCGCCAACCAAATCAAAGCTGGGTTCACCTCAACTTGAAGCAACTTTTGACACAATCATCCAAGCTTTCATATTTCTTGATAAAAATGGCGATGGCAAGCTCAACAAGAAAGAAATGGTCAAAGCTCTGAATGAGGCTTCTCCATGCGAGAGATCCCCTGCACGCATTATACAAACTAGATTCAAGGAAATGGACTGGAACAACAGTGGGAAGGTCAATTTCAGGGAGTTTCTATTTGGTTTCATTAACTGGGTTGGAATTGACACAGATGATGACCTCTCTCTCACATGAAGTTGTTAAAACAGGACAGAGGACATCAAGACATCATATAGACATGAAGACAATGGCTTAAAAAATAAGGTCAGACTGATAATGTCATTCAAAACTGAACACTTGCTGATGATTATAGCGAGATACTACTCTTGTTTGTTTATTTCATTTGACTAATTGTAATGTTCGAACGACATTGTGAATTAGATTACATAATACTATTCTTATCGTCATTGTTGTTACT ATGAGCTTTCTTCTCTGTGTTTCCATGGAAGTTTCACCTGTTGGAAGCATGTTTTTCTGCTGCAATTCATCAAATAAATACAAGAGATTGGATGCAAAGCTTGGAAGAAAAATGCTTGAAGTCAAAAGAAATTTAGCTGGACATGACAATTTCAAGTCAATAAATGGCATAATCTTGAGATTTCCCCAATTCAAAGAAGGATTACAAAACATCAGAGGTGTATTTGAACAGTATGATGAAGATTCCAATGGAAGCATTGATCGCGAAGAACTCAAGAAATGCTTGCAACAGCTGCAAATGCATATGACCGAGGAGGAAGTCAAGGATCTTTTCCAGTCTTGTGACATTGATGGAAGTGCTGGAATACAGTTCAACGAGTTTATCGTTCTTCTATGTCTCATTTATCTCCTCAAGGACCAGAAATCGCCAACCAAATCAAAGCTGGGTTCACCTCAACTTGAAGCAACTTTTGACACAATCATCCAAGCTTTCATATTTCTTGATAAAAATGGCGATGGCAAGCTCAACAAGAAAGAAATGGTCAAAGCTCTGAATGAGGCTTCTCCATGCGAGAGATCCCCTGCACGCATTATACAAACTAGATTCAAGGAAATGGACTGGAACAACAGTGGGAAGGTCAATTTCAGGGAGTTTCTATTTGGTTTCATTAACTGGGTTGGAATTGACACAGATGATGACCTCTCTCTCACATGA MSFLLCVSMEVSPVGSMFFCCNSSNKYKRLDAKLGRKMLEVKRNLAGHDNFKSINGIILRFPQFKEGLQNIRGVFEQYDEDSNGSIDREELKKCLQQLQMHMTEEEVKDLFQSCDIDGSAGIQFNEFIVLLCLIYLLKDQKSPTKSKLGSPQLEATFDTIIQAFIFLDKNGDGKLNKKEMVKALNEASPCERSPARIIQTRFKEMDWNNSGKVNFREFLFGFINWVGIDTDDDLSLT Homology
BLAST of Tan0002009 vs. ExPASy Swiss-Prot
Match: Q9LRN6 (Probable calcium-binding protein CML22 OS=Arabidopsis thaliana OX=3702 GN=CML22 PE=3 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 2.4e-66 Identity = 127/224 (56.70%), Postives = 166/224 (74.11%), Query Frame = 0
BLAST of Tan0002009 vs. ExPASy Swiss-Prot
Match: Q52K82 (Probable calcium-binding protein CML21 OS=Arabidopsis thaliana OX=3702 GN=CML21 PE=2 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 6.7e-56 Identity = 102/206 (49.51%), Postives = 150/206 (72.82%), Query Frame = 0
BLAST of Tan0002009 vs. ExPASy Swiss-Prot
Match: P41210 (Caltractin OS=Atriplex nummularia OX=3553 PE=2 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 2.0e-12 Identity = 46/151 (30.46%), Postives = 76/151 (50.33%), Query Frame = 0
BLAST of Tan0002009 vs. ExPASy Swiss-Prot
Match: Q9ZSA3 (Calcium-dependent protein kinase 22 OS=Arabidopsis thaliana OX=3702 GN=CPK22 PE=3 SV=2) HSP 1 Score: 73.6 bits (179), Expect = 3.5e-12 Identity = 46/154 (29.87%), Postives = 80/154 (51.95%), Query Frame = 0
BLAST of Tan0002009 vs. ExPASy Swiss-Prot
Match: P02588 (Troponin C, skeletal muscle OS=Gallus gallus OX=9031 GN=TNNC2 PE=1 SV=3) HSP 1 Score: 71.2 bits (173), Expect = 1.7e-11 Identity = 43/155 (27.74%), Postives = 74/155 (47.74%), Query Frame = 0
BLAST of Tan0002009 vs. NCBI nr
Match: XP_038892181.1 (probable calcium-binding protein CML22 isoform X1 [Benincasa hispida]) HSP 1 Score: 434.5 bits (1116), Expect = 5.9e-118 Identity = 211/228 (92.54%), Postives = 222/228 (97.37%), Query Frame = 0
BLAST of Tan0002009 vs. NCBI nr
Match: XP_011650876.1 (probable calcium-binding protein CML22 [Cucumis sativus] >XP_031737636.1 probable calcium-binding protein CML22 [Cucumis sativus] >KGN56734.1 hypothetical protein Csa_010293 [Cucumis sativus]) HSP 1 Score: 426.8 bits (1096), Expect = 1.2e-115 Identity = 208/227 (91.63%), Postives = 218/227 (96.04%), Query Frame = 0
BLAST of Tan0002009 vs. NCBI nr
Match: XP_038892189.1 (probable calcium-binding protein CML22 isoform X2 [Benincasa hispida] >XP_038892198.1 probable calcium-binding protein CML22 isoform X2 [Benincasa hispida]) HSP 1 Score: 426.0 bits (1094), Expect = 2.1e-115 Identity = 207/226 (91.59%), Postives = 219/226 (96.90%), Query Frame = 0
BLAST of Tan0002009 vs. NCBI nr
Match: XP_022924247.1 (probable calcium-binding protein CML22 isoform X1 [Cucurbita moschata] >XP_022924248.1 probable calcium-binding protein CML22 isoform X1 [Cucurbita moschata] >XP_022924249.1 probable calcium-binding protein CML22 isoform X1 [Cucurbita moschata] >XP_022924250.1 probable calcium-binding protein CML22 isoform X1 [Cucurbita moschata] >XP_023526231.1 probable calcium-binding protein CML22 [Cucurbita pepo subsp. pepo] >XP_023526232.1 probable calcium-binding protein CML22 [Cucurbita pepo subsp. pepo] >XP_023526233.1 probable calcium-binding protein CML22 [Cucurbita pepo subsp. pepo] >XP_023526234.1 probable calcium-binding protein CML22 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 425.2 bits (1092), Expect = 3.6e-115 Identity = 205/226 (90.71%), Postives = 217/226 (96.02%), Query Frame = 0
BLAST of Tan0002009 vs. NCBI nr
Match: XP_022980390.1 (probable calcium-binding protein CML22 isoform X1 [Cucurbita maxima] >XP_022980391.1 probable calcium-binding protein CML22 isoform X1 [Cucurbita maxima] >XP_022980392.1 probable calcium-binding protein CML22 isoform X1 [Cucurbita maxima] >XP_022980393.1 probable calcium-binding protein CML22 isoform X1 [Cucurbita maxima]) HSP 1 Score: 424.5 bits (1090), Expect = 6.1e-115 Identity = 205/227 (90.31%), Postives = 217/227 (95.59%), Query Frame = 0
BLAST of Tan0002009 vs. ExPASy TrEMBL
Match: A0A0A0L6R7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G130890 PE=4 SV=1) HSP 1 Score: 426.8 bits (1096), Expect = 6.0e-116 Identity = 208/227 (91.63%), Postives = 218/227 (96.04%), Query Frame = 0
BLAST of Tan0002009 vs. ExPASy TrEMBL
Match: A0A6J1EBV7 (probable calcium-binding protein CML22 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431775 PE=4 SV=1) HSP 1 Score: 425.2 bits (1092), Expect = 1.7e-115 Identity = 205/226 (90.71%), Postives = 217/226 (96.02%), Query Frame = 0
BLAST of Tan0002009 vs. ExPASy TrEMBL
Match: A0A6J1ITH1 (probable calcium-binding protein CML22 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479770 PE=4 SV=1) HSP 1 Score: 424.5 bits (1090), Expect = 3.0e-115 Identity = 205/227 (90.31%), Postives = 217/227 (95.59%), Query Frame = 0
BLAST of Tan0002009 vs. ExPASy TrEMBL
Match: A0A1S3AVV2 (probable calcium-binding protein CML22 OS=Cucumis melo OX=3656 GN=LOC103483480 PE=4 SV=1) HSP 1 Score: 424.5 bits (1090), Expect = 3.0e-115 Identity = 206/225 (91.56%), Postives = 217/225 (96.44%), Query Frame = 0
BLAST of Tan0002009 vs. ExPASy TrEMBL
Match: A0A6J1D045 (probable calcium-binding protein CML22 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016137 PE=4 SV=1) HSP 1 Score: 421.8 bits (1083), Expect = 1.9e-114 Identity = 206/227 (90.75%), Postives = 215/227 (94.71%), Query Frame = 0
BLAST of Tan0002009 vs. TAIR 10
Match: AT3G24110.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 253.4 bits (646), Expect = 1.7e-67 Identity = 127/224 (56.70%), Postives = 166/224 (74.11%), Query Frame = 0
BLAST of Tan0002009 vs. TAIR 10
Match: AT4G26470.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 218.8 bits (556), Expect = 4.7e-57 Identity = 102/206 (49.51%), Postives = 150/206 (72.82%), Query Frame = 0
BLAST of Tan0002009 vs. TAIR 10
Match: AT4G26470.2 (Calcium-binding EF-hand family protein ) HSP 1 Score: 174.5 bits (441), Expect = 1.0e-43 Identity = 84/175 (48.00%), Postives = 125/175 (71.43%), Query Frame = 0
BLAST of Tan0002009 vs. TAIR 10
Match: AT5G04870.1 (calcium dependent protein kinase 1 ) HSP 1 Score: 70.9 bits (172), Expect = 1.6e-12 Identity = 46/189 (24.34%), Postives = 89/189 (47.09%), Query Frame = 0
BLAST of Tan0002009 vs. TAIR 10
Match: AT4G04710.1 (calcium-dependent protein kinase 22 ) HSP 1 Score: 69.7 bits (169), Expect = 3.6e-12 Identity = 47/156 (30.13%), Postives = 80/156 (51.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|