Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAAATCCAATCTTGCAACCTTCCTTCCGCTTCTTTTCTTAATTTCCATTCCCTTTCACCCACCAGCATCCCAAAACGACGTGGTCGCCTCTTCCATTTGCCCCAAAACCAGAAATCCCCCTTTTTGCGCCACCGTCGTGCAATTCGCCGCCACCGCCGACCTGAAACTCCTCGTCGGCTACACTCTCAACAAGGCCCACACGAACGCCGGCGACTCGCTCCGTCTCGCTCAGTTGCTGGCGACGACGGCCGCCGGTCCCCTCCTCAGGCAGCACTACTCCTCCTGCTCCGCCATCTACGCCGGCGTCTTCGTCCAAATCGGAAAGGCGCAAATGCACTTGGCCGACGGAGACTATAGAGATGTCCACGGGACGGGGCAGGGTCGGAGAATGGCTCCCCATCCCCGTCTCCGCCCCGATTTCATTCCCCGTCTCCGCGAAATTCCCCATTTAATTTCGCAGAAAAAGGGGCGGGGAATACCGTTTATAATTTTATTTTTTTAAAATTGTATTAACTAATTTCTTTTTTTAAAAAAATTTGTATTTAAATGATTAATTATTCTTTATAAATTTATAGTTAAAGAGGCATATTTTCAATTTTCATAAAAAATAAAATTATATTTAATAAATTTTTAGATTTATAGTGTATTAGATGTATAAAAATATATATATTTAAAACTAAATAAAATAATCGGGGCGGGGACGGGAGCGGGGTCGGGGACGGGGAATGTATTTCCCGTCCCCGTTTAGCCAACGGGAAAAATTTTGTCCCCGCTCCCTCCCCCGCGGAGAAAATGAACATCTCTAACCAGGACGTGATTGTTCTGACCACCGACGTCGTGACGGTCGTCGACCAGTGCCTGGCTAACTTCAAGACGCCGCCGCTGACGAAGAACGGGAATACTCTGGAAGATTTATGTAGCATGGTGTTGGTTTTGACAGATCTTCTCCCCGGAGTTCTGACCGATGGAATTGGAAACTAG
mRNA sequence
ATGGCTAAATCCAATCTTGCAACCTTCCTTCCGCTTCTTTTCTTAATTTCCATTCCCTTTCACCCACCAGCATCCCAAAACGACGTGGTCGCCTCTTCCATTTGCCCCAAAACCAGAAATCCCCCTTTTTGCGCCACCGTCGTGCAATTCGCCGCCACCGCCGACCTGAAACTCCTCGTCGGCTACACTCTCAACAAGGCCCACACGAACGCCGGCGACTCGCTCCGTCTCGCTCAGTTGCTGGCGACGACGGCCGCCGGTCCCCTCCTCAGGCAGCACTACTCCTCCTGCTCCGCCATCTACGCCGGCGTCTTCGTCCAAATCGGAAAGGCGCAAATGCACTTGGCCGACGGAGACTATAGAGATGACGTGATTGTTCTGACCACCGACGTCGTGACGGTCGTCGACCAGTGCCTGGCTAACTTCAAGACGCCGCCGCTGACGAAGAACGGGAATACTCTGGAAGATTTATGTAGCATGGTGTTGGTTTTGACAGATCTTCTCCCCGGAGTTCTGACCGATGGAATTGGAAACTAG
Coding sequence (CDS)
ATGGCTAAATCCAATCTTGCAACCTTCCTTCCGCTTCTTTTCTTAATTTCCATTCCCTTTCACCCACCAGCATCCCAAAACGACGTGGTCGCCTCTTCCATTTGCCCCAAAACCAGAAATCCCCCTTTTTGCGCCACCGTCGTGCAATTCGCCGCCACCGCCGACCTGAAACTCCTCGTCGGCTACACTCTCAACAAGGCCCACACGAACGCCGGCGACTCGCTCCGTCTCGCTCAGTTGCTGGCGACGACGGCCGCCGGTCCCCTCCTCAGGCAGCACTACTCCTCCTGCTCCGCCATCTACGCCGGCGTCTTCGTCCAAATCGGAAAGGCGCAAATGCACTTGGCCGACGGAGACTATAGAGATGACGTGATTGTTCTGACCACCGACGTCGTGACGGTCGTCGACCAGTGCCTGGCTAACTTCAAGACGCCGCCGCTGACGAAGAACGGGAATACTCTGGAAGATTTATGTAGCATGGTGTTGGTTTTGACAGATCTTCTCCCCGGAGTTCTGACCGATGGAATTGGAAACTAG
Protein sequence
MAKSNLATFLPLLFLISIPFHPPASQNDVVASSICPKTRNPPFCATVVQFAATADLKLLVGYTLNKAHTNAGDSLRLAQLLATTAAGPLLRQHYSSCSAIYAGVFVQIGKAQMHLADGDYRDDVIVLTTDVVTVVDQCLANFKTPPLTKNGNTLEDLCSMVLVLTDLLPGVLTDGIGN
Homology
BLAST of Tan0001998 vs. ExPASy Swiss-Prot
Match:
P83326 (Pectinesterase inhibitor OS=Actinidia deliciosa OX=3627 GN=PMEI PE=1 SV=2)
HSP 1 Score: 81.6 bits (200), Expect = 9.6e-15
Identity = 53/173 (30.64%), Postives = 88/173 (50.87%), Query Frame = 0
Query: 6 LATFLPLLFLISIPFHPPASQNDVVASSICPKTRNPPFCATVVQF---AATADLKLLVGY 65
++ L +LF+ + P + + S ICPKTRNP C ++ +A+ DLK L +
Sbjct: 12 VSLLLVILFISPLSQRPSVKAENHLISEICPKTRNPSLCLQALESDPRSASKDLKGLGQF 71
Query: 66 TLNKAHTNAGDSLRLAQLLATTAAGPLLRQHYSSCSAIYAGVFVQIGKAQMHLADGDYRD 125
+++ A +A + ++ L A P L+ Y +CS YA +G+A+ L GDY +
Sbjct: 72 SIDIAQASAKQTSKIIASLTNQATDPKLKGRYETCSENYADAIDSLGQAKQFLTSGDY-N 131
Query: 126 DVIVLTTDVVTVVDQCLANFKTPP-----LTKNGNTLEDLCSMVLVLTDLLPG 171
+ + + C +F+ PP L + LEDLC +VLV+++LLPG
Sbjct: 132 SLNIYASAAFDGAGTCEDSFEGPPNIPTQLHQADLKLEDLCDIVLVISNLLPG 183
BLAST of Tan0001998 vs. NCBI nr
Match:
XP_038893354.1 (pectinesterase inhibitor-like [Benincasa hispida])
HSP 1 Score: 241.1 bits (614), Expect = 7.2e-60
Identity = 132/183 (72.13%), Postives = 143/183 (78.14%), Query Frame = 0
Query: 1 MAKSNLATFLPLLFLISIPFHPPASQNDVVASSICPKTRNPPFCATVVQFAATADLKLLV 60
MAKSNL+ L LLFLISI F A+QNDVVAS+ICP+T+NPPFCATVVQ AATADLK+L
Sbjct: 1 MAKSNLSALLSLLFLISISFRTLAAQNDVVASAICPRTKNPPFCATVVQSAATADLKVLA 60
Query: 61 GYTLNKAHTNAGDSLRLAQLLATTAAGPLLRQHYSSCSAIYAGVFVQIGKAQMHLADGDY 120
GYTLN AHTNAGDSL LA+LLA TAA PLL+ YSSCSA Y G F QI +AQ HLADGDY
Sbjct: 61 GYTLNLAHTNAGDSLCLARLLAATAASPLLKWRYSSCSASYDGAFAQIRQAQKHLADGDY 120
Query: 121 RDDVIVLTTDVVTVVDQCLANFKTPP-----LTKNGNTLEDLCSMVLVLTDLLPGVLTDG 179
DV LTT VV V +CLA FK PP LTKNG TLEDLCS+VLVL DLLPGV TDG
Sbjct: 121 L-DVTDLTTGVVAAVAKCLAKFKKPPPDASGLTKNGKTLEDLCSIVLVLADLLPGVRTDG 180
BLAST of Tan0001998 vs. NCBI nr
Match:
XP_022146771.1 (pectinesterase inhibitor-like [Momordica charantia])
HSP 1 Score: 193.7 bits (491), Expect = 1.3e-45
Identity = 112/187 (59.89%), Postives = 130/187 (69.52%), Query Frame = 0
Query: 1 MAKSNLATFLP-LLFLISIPF-HPPASQNDVVASSICPKTRNPPFCATVVQFAATADLKL 60
MA SNLA FL L+F SIPF H AS NDVVAS ICP TRNPPFC+ +V AATADLK+
Sbjct: 1 MANSNLAAFLLFLIFFTSIPFPHTSASPNDVVASYICPNTRNPPFCSKIVHSAATADLKI 60
Query: 61 LVGYTLNKAHTNAGDSLRLAQLLATTAAGPLLRQHYSSCSAIYAGVFVQIGKAQMHLADG 120
L GYTLN A AGD LRLA+ LA TAA L+Q YSSC+A Y G F IG+A+ +LADG
Sbjct: 61 LAGYTLNLARATAGDGLRLARSLAATAADRRLKQRYSSCAANYDGAFAHIGQARKYLADG 120
Query: 121 DYRDDVIVLTTDVVTVVDQCLANFKTPP-----LTKNGNTLEDLCSMVLVLTDLLPG--V 179
Y D V LT+ V V++CL K PP +TK GNT+EDLCS+VLVL +LLPG +
Sbjct: 121 AY-DYVADLTSGVAAAVEKCLGKLKLPPRGPSAVTKKGNTVEDLCSIVLVLAELLPGTEI 180
BLAST of Tan0001998 vs. NCBI nr
Match:
KAA0053617.1 (pectinesterase inhibitor-like [Cucumis melo var. makuwa])
HSP 1 Score: 140.6 bits (353), Expect = 1.3e-29
Identity = 76/149 (51.01%), Postives = 99/149 (66.44%), Query Frame = 0
Query: 24 ASQNDVVASSICPKTRNPPFCATVVQFAATADLKLLVGYTLNKAHTNAGDSLRLAQLLAT 83
AS NDVV S+ICPKT NPPFC++V++FA+T DLK L YTLN AHTNA SL LA+ + T
Sbjct: 25 ASSNDVVVSTICPKTSNPPFCSSVLKFASTTDLKGLAVYTLNLAHTNARKSLTLAKSITT 84
Query: 84 TAAGPLLRQHYSSCSAIYAGVFVQIGKAQMHLADGDYRDDVIVLTTDVVTVVDQCLANFK 143
T P L+Q YSSC+ Y I AQ LA GD+ + V ++T+ +T +D C F
Sbjct: 85 TTTNPQLKQRYSSCAESYDEAAGDIENAQKDLALGDF-NAVNIVTSGAMTEIDDCQDKFA 144
Query: 144 TPP----LTKNGNTLEDLCSMVLVLTDLL 169
PP L KNG TL D+CS++LV+++LL
Sbjct: 145 QPPKDTSLLKNGKTLNDICSIILVISNLL 172
BLAST of Tan0001998 vs. NCBI nr
Match:
KAA0067308.1 (pectinesterase inhibitor-like [Cucumis melo var. makuwa] >TYK09008.1 pectinesterase inhibitor-like [Cucumis melo var. makuwa])
HSP 1 Score: 139.4 bits (350), Expect = 3.0e-29
Identity = 77/150 (51.33%), Postives = 98/150 (65.33%), Query Frame = 0
Query: 24 ASQNDVVASSICPKTRNPPFCATVVQFAATADLKLLVGYTLNKAHTNAGDSLRLAQLLAT 83
AS NDVV S+ICPKT NPPFC++V++ A T DLK L YTLN AHTNA SL LA+ LAT
Sbjct: 25 ASSNDVVVSTICPKTSNPPFCSSVLKSAGTTDLKGLAVYTLNLAHTNARKSLTLAKSLAT 84
Query: 84 TAAGPLLRQHYSSCSAIYAGVFVQIGKAQMHLADGDYRDDVIVLTTDVVTVVDQCLANFK 143
T P L+Q YSSC+ Y I AQ LA GD+ + V ++T+ +T +D C F
Sbjct: 85 TTTNPQLKQRYSSCAESYDEAVGDIENAQKDLALGDF-NAVNIVTSGAMTEIDDCQDKFA 144
Query: 144 TPP-----LTKNGNTLEDLCSMVLVLTDLL 169
PP L KNG TL D+CS++LV+++LL
Sbjct: 145 QPPKDTSLLLKNGKTLNDICSIILVISNLL 173
BLAST of Tan0001998 vs. NCBI nr
Match:
KAA0052848.1 (pectinesterase inhibitor-like [Cucumis melo var. makuwa])
HSP 1 Score: 138.3 bits (347), Expect = 6.6e-29
Identity = 76/150 (50.67%), Postives = 97/150 (64.67%), Query Frame = 0
Query: 24 ASQNDVVASSICPKTRNPPFCATVVQFAATADLKLLVGYTLNKAHTNAGDSLRLAQLLAT 83
AS NDVV S+ICPKT NPPFC++V++ A T DLK L YTLN AHTNA SL LA+ LAT
Sbjct: 25 ASSNDVVVSTICPKTSNPPFCSSVLKSAGTTDLKGLAVYTLNLAHTNARKSLTLAKSLAT 84
Query: 84 TAAGPLLRQHYSSCSAIYAGVFVQIGKAQMHLADGDYRDDVIVLTTDVVTVVDQCLANFK 143
T P L+Q YSSC+ Y I AQ L GD+ + V ++T+ +T +D C F
Sbjct: 85 TTTNPQLKQRYSSCAESYDEAIGDIENAQKDLTLGDF-NAVNIVTSGAMTEIDDCQDKFA 144
Query: 144 TPP-----LTKNGNTLEDLCSMVLVLTDLL 169
PP L KNG TL D+CS++LV+++LL
Sbjct: 145 QPPKDTSLLLKNGKTLNDICSIILVISNLL 173
BLAST of Tan0001998 vs. ExPASy TrEMBL
Match:
A0A6J1D0C7 (pectinesterase inhibitor-like OS=Momordica charantia OX=3673 GN=LOC111015898 PE=4 SV=1)
HSP 1 Score: 193.7 bits (491), Expect = 6.4e-46
Identity = 112/187 (59.89%), Postives = 130/187 (69.52%), Query Frame = 0
Query: 1 MAKSNLATFLP-LLFLISIPF-HPPASQNDVVASSICPKTRNPPFCATVVQFAATADLKL 60
MA SNLA FL L+F SIPF H AS NDVVAS ICP TRNPPFC+ +V AATADLK+
Sbjct: 1 MANSNLAAFLLFLIFFTSIPFPHTSASPNDVVASYICPNTRNPPFCSKIVHSAATADLKI 60
Query: 61 LVGYTLNKAHTNAGDSLRLAQLLATTAAGPLLRQHYSSCSAIYAGVFVQIGKAQMHLADG 120
L GYTLN A AGD LRLA+ LA TAA L+Q YSSC+A Y G F IG+A+ +LADG
Sbjct: 61 LAGYTLNLARATAGDGLRLARSLAATAADRRLKQRYSSCAANYDGAFAHIGQARKYLADG 120
Query: 121 DYRDDVIVLTTDVVTVVDQCLANFKTPP-----LTKNGNTLEDLCSMVLVLTDLLPG--V 179
Y D V LT+ V V++CL K PP +TK GNT+EDLCS+VLVL +LLPG +
Sbjct: 121 AY-DYVADLTSGVAAAVEKCLGKLKLPPRGPSAVTKKGNTVEDLCSIVLVLAELLPGTEI 180
BLAST of Tan0001998 vs. ExPASy TrEMBL
Match:
A0A5A7UGK3 (Pectinesterase inhibitor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold5458G00010 PE=4 SV=1)
HSP 1 Score: 140.6 bits (353), Expect = 6.4e-30
Identity = 76/149 (51.01%), Postives = 99/149 (66.44%), Query Frame = 0
Query: 24 ASQNDVVASSICPKTRNPPFCATVVQFAATADLKLLVGYTLNKAHTNAGDSLRLAQLLAT 83
AS NDVV S+ICPKT NPPFC++V++FA+T DLK L YTLN AHTNA SL LA+ + T
Sbjct: 25 ASSNDVVVSTICPKTSNPPFCSSVLKFASTTDLKGLAVYTLNLAHTNARKSLTLAKSITT 84
Query: 84 TAAGPLLRQHYSSCSAIYAGVFVQIGKAQMHLADGDYRDDVIVLTTDVVTVVDQCLANFK 143
T P L+Q YSSC+ Y I AQ LA GD+ + V ++T+ +T +D C F
Sbjct: 85 TTTNPQLKQRYSSCAESYDEAAGDIENAQKDLALGDF-NAVNIVTSGAMTEIDDCQDKFA 144
Query: 144 TPP----LTKNGNTLEDLCSMVLVLTDLL 169
PP L KNG TL D+CS++LV+++LL
Sbjct: 145 QPPKDTSLLKNGKTLNDICSIILVISNLL 172
BLAST of Tan0001998 vs. ExPASy TrEMBL
Match:
A0A5A7VHV0 (Pectinesterase inhibitor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold615G00400 PE=4 SV=1)
HSP 1 Score: 139.4 bits (350), Expect = 1.4e-29
Identity = 77/150 (51.33%), Postives = 98/150 (65.33%), Query Frame = 0
Query: 24 ASQNDVVASSICPKTRNPPFCATVVQFAATADLKLLVGYTLNKAHTNAGDSLRLAQLLAT 83
AS NDVV S+ICPKT NPPFC++V++ A T DLK L YTLN AHTNA SL LA+ LAT
Sbjct: 25 ASSNDVVVSTICPKTSNPPFCSSVLKSAGTTDLKGLAVYTLNLAHTNARKSLTLAKSLAT 84
Query: 84 TAAGPLLRQHYSSCSAIYAGVFVQIGKAQMHLADGDYRDDVIVLTTDVVTVVDQCLANFK 143
T P L+Q YSSC+ Y I AQ LA GD+ + V ++T+ +T +D C F
Sbjct: 85 TTTNPQLKQRYSSCAESYDEAVGDIENAQKDLALGDF-NAVNIVTSGAMTEIDDCQDKFA 144
Query: 144 TPP-----LTKNGNTLEDLCSMVLVLTDLL 169
PP L KNG TL D+CS++LV+++LL
Sbjct: 145 QPPKDTSLLLKNGKTLNDICSIILVISNLL 173
BLAST of Tan0001998 vs. ExPASy TrEMBL
Match:
A0A5A7UC91 (Pectinesterase inhibitor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6215G00010 PE=4 SV=1)
HSP 1 Score: 138.3 bits (347), Expect = 3.2e-29
Identity = 76/150 (50.67%), Postives = 97/150 (64.67%), Query Frame = 0
Query: 24 ASQNDVVASSICPKTRNPPFCATVVQFAATADLKLLVGYTLNKAHTNAGDSLRLAQLLAT 83
AS NDVV S+ICPKT NPPFC++V++ A T DLK L YTLN AHTNA SL LA+ LAT
Sbjct: 25 ASSNDVVVSTICPKTSNPPFCSSVLKSAGTTDLKGLAVYTLNLAHTNARKSLTLAKSLAT 84
Query: 84 TAAGPLLRQHYSSCSAIYAGVFVQIGKAQMHLADGDYRDDVIVLTTDVVTVVDQCLANFK 143
T P L+Q YSSC+ Y I AQ L GD+ + V ++T+ +T +D C F
Sbjct: 85 TTTNPQLKQRYSSCAESYDEAIGDIENAQKDLTLGDF-NAVNIVTSGAMTEIDDCQDKFA 144
Query: 144 TPP-----LTKNGNTLEDLCSMVLVLTDLL 169
PP L KNG TL D+CS++LV+++LL
Sbjct: 145 QPPKDTSLLLKNGKTLNDICSIILVISNLL 173
BLAST of Tan0001998 vs. ExPASy TrEMBL
Match:
A0A5A7V0U2 (Pectinesterase inhibitor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G00340 PE=4 SV=1)
HSP 1 Score: 137.9 bits (346), Expect = 4.2e-29
Identity = 77/149 (51.68%), Postives = 99/149 (66.44%), Query Frame = 0
Query: 24 ASQNDVVASSICPKTRNPPFCATVVQFAATADLKLLVGYTLNKAHTNAGDSLRLAQLLAT 83
AS NDV+ S+ICPKT NPPFC++V++FA T DLK L YTLN AHTNA SL LA+ LAT
Sbjct: 25 ASSNDVI-STICPKTSNPPFCSSVLKFAGTTDLKGLAVYTLNLAHTNARKSLTLAKSLAT 84
Query: 84 TAAGPLLRQHYSSCSAIYAGVFVQIGKAQMHLADGDYRDDVIVLTTDVVTVVDQCLANFK 143
T P L+Q YSSC+ Y I AQ LA GD+ + V ++T+ +T +D C F
Sbjct: 85 TTTNPQLKQRYSSCAESYDEAVGDIENAQKDLALGDF-NAVNIVTSGAMTEIDDCQDKFA 144
Query: 144 TPP----LTKNGNTLEDLCSMVLVLTDLL 169
PP L KNG TL D+CS++LV+++LL
Sbjct: 145 QPPKDTSLLKNGKTLNDICSIILVISNLL 171
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P83326 | 9.6e-15 | 30.64 | Pectinesterase inhibitor OS=Actinidia deliciosa OX=3627 GN=PMEI PE=1 SV=2 | [more] |
Match Name | E-value | Identity | Description | |
XP_038893354.1 | 7.2e-60 | 72.13 | pectinesterase inhibitor-like [Benincasa hispida] | [more] |
XP_022146771.1 | 1.3e-45 | 59.89 | pectinesterase inhibitor-like [Momordica charantia] | [more] |
KAA0053617.1 | 1.3e-29 | 51.01 | pectinesterase inhibitor-like [Cucumis melo var. makuwa] | [more] |
KAA0067308.1 | 3.0e-29 | 51.33 | pectinesterase inhibitor-like [Cucumis melo var. makuwa] >TYK09008.1 pectinester... | [more] |
KAA0052848.1 | 6.6e-29 | 50.67 | pectinesterase inhibitor-like [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1D0C7 | 6.4e-46 | 59.89 | pectinesterase inhibitor-like OS=Momordica charantia OX=3673 GN=LOC111015898 PE=... | [more] |
A0A5A7UGK3 | 6.4e-30 | 51.01 | Pectinesterase inhibitor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
A0A5A7VHV0 | 1.4e-29 | 51.33 | Pectinesterase inhibitor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... | [more] |
A0A5A7UC91 | 3.2e-29 | 50.67 | Pectinesterase inhibitor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
A0A5A7V0U2 | 4.2e-29 | 51.68 | Pectinesterase inhibitor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
Match Name | E-value | Identity | Description | |