Tan0001630 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACCATAATAATACTAAAAAAAATCTGGTTAACATACTTTTGTGTAGGTGGAAGCGTACAATAGCAGTAGCATGGAAAAATCAATGCACTCATAAGTAAGATTAGCCCCCCAAAAACTTCTCTCTTCTTTCCCTTTATATATATCATCCTCTCCCATCTTCTCCCTCGCTTCAATCTTCCTCTCTCTCTCTCTTTTTTTCTTCGAGCTATGGCCGCCGCACGTGCCATGCTCGTGCTCGCCCTCTCTTTTCTTGCTCTTTCATCCTCCGCCATTGCTCAAGCTCCCTCCCCTGCTCCTGTTCCCTCCGCCGCCGCACCGCCGGTTTCAGTACCACCGACTACACCACCGCCCGCCACCCCCCCACCGGCAGCCTCGCCTCCACCAAGCATCTCCACTCCACCGATGGCGGCTCCTCCTCCCTCCATCCCGCCGATGATGTCTTCTCCGCCGCCTATGGCAATGAGTCCAGGCCCAATAATGGCCGACAGCCCACCATCGCCTCCAGGCCCAAGCCCAGGCCCAGAACCAATGACGCCTCCGGGCCCAGCTCCATCCCCGCCACCGCCCCCACCGCGGGGAGGGGGATTTTCCATCCAGCACGGCGGCTACAAGGCGGGTCTTGCGGCGGTGTTGGGTGGCCTAGCCGTCGTCCTGGTTTAACAGCATAATACTTAAATTTGCTGTAGATTAATTATGAGCTCCATATCCATACTCATTTGTGTATTCTTTTTTCTTTTGTTTTTCATTTCCATCTCTTTCTTTCTCTCTGATCTCTTTCCCTGATGATTCTTGAGAGCAGCATGAGTGATTTGTGGGATATGTAACAGTTTATTTGTTAGCATTTTCATTTTTTTTCTAGCTGAATAAGAGAGACTTGTTTCTTCTT CACCATAATAATACTAAAAAAAATCTGGTTAACATACTTTTGTGTAGGTGGAAGCGTACAATAGCAGTAGCATGGAAAAATCAATGCACTCATAAGTAAGATTAGCCCCCCAAAAACTTCTCTCTTCTTTCCCTTTATATATATCATCCTCTCCCATCTTCTCCCTCGCTTCAATCTTCCTCTCTCTCTCTCTTTTTTTCTTCGAGCTATGGCCGCCGCACGTGCCATGCTCGTGCTCGCCCTCTCTTTTCTTGCTCTTTCATCCTCCGCCATTGCTCAAGCTCCCTCCCCTGCTCCTGTTCCCTCCGCCGCCGCACCGCCGGTTTCAGTACCACCGACTACACCACCGCCCGCCACCCCCCCACCGGCAGCCTCGCCTCCACCAAGCATCTCCACTCCACCGATGGCGGCTCCTCCTCCCTCCATCCCGCCGATGATGTCTTCTCCGCCGCCTATGGCAATGAGTCCAGGCCCAATAATGGCCGACAGCCCACCATCGCCTCCAGGCCCAAGCCCAGGCCCAGAACCAATGACGCCTCCGGGCCCAGCTCCATCCCCGCCACCGCCCCCACCGCGGGGAGGGGGATTTTCCATCCAGCACGGCGGCTACAAGGCGGGTCTTGCGGCGGTGTTGGGTGGCCTAGCCGTCGTCCTGGTTTAACAGCATAATACTTAAATTTGCTGTAGATTAATTATGAGCTCCATATCCATACTCATTTGTGTATTCTTTTTTCTTTTGTTTTTCATTTCCATCTCTTTCTTTCTCTCTGATCTCTTTCCCTGATGATTCTTGAGAGCAGCATGAGTGATTTGTGGGATATGTAACAGTTTATTTGTTAGCATTTTCATTTTTTTTCTAGCTGAATAAGAGAGACTTGTTTCTTCTT ATGGCCGCCGCACGTGCCATGCTCGTGCTCGCCCTCTCTTTTCTTGCTCTTTCATCCTCCGCCATTGCTCAAGCTCCCTCCCCTGCTCCTGTTCCCTCCGCCGCCGCACCGCCGGTTTCAGTACCACCGACTACACCACCGCCCGCCACCCCCCCACCGGCAGCCTCGCCTCCACCAAGCATCTCCACTCCACCGATGGCGGCTCCTCCTCCCTCCATCCCGCCGATGATGTCTTCTCCGCCGCCTATGGCAATGAGTCCAGGCCCAATAATGGCCGACAGCCCACCATCGCCTCCAGGCCCAAGCCCAGGCCCAGAACCAATGACGCCTCCGGGCCCAGCTCCATCCCCGCCACCGCCCCCACCGCGGGGAGGGGGATTTTCCATCCAGCACGGCGGCTACAAGGCGGGTCTTGCGGCGGTGTTGGGTGGCCTAGCCGTCGTCCTGGTTTAA MAAARAMLVLALSFLALSSSAIAQAPSPAPVPSAAAPPVSVPPTTPPPATPPPAASPPPSISTPPMAAPPPSIPPMMSSPPPMAMSPGPIMADSPPSPPGPSPGPEPMTPPGPAPSPPPPPPRGGGFSIQHGGYKAGLAAVLGGLAVVLV Homology
BLAST of Tan0001630 vs. NCBI nr
Match: XP_022923372.1 (classical arabinogalactan protein 9-like [Cucurbita moschata]) HSP 1 Score: 141.0 bits (354), Expect = 8.5e-30 Identity = 113/161 (70.19%), Postives = 125/161 (77.64%), Query Frame = 0
BLAST of Tan0001630 vs. NCBI nr
Match: XP_038903480.1 (classical arabinogalactan protein 9-like [Benincasa hispida]) HSP 1 Score: 138.3 bits (347), Expect = 5.5e-29 Identity = 112/155 (72.26%), Postives = 121/155 (78.06%), Query Frame = 0
BLAST of Tan0001630 vs. NCBI nr
Match: XP_023553563.1 (classical arabinogalactan protein 9-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 134.4 bits (337), Expect = 8.0e-28 Identity = 113/162 (69.75%), Postives = 124/162 (76.54%), Query Frame = 0
BLAST of Tan0001630 vs. NCBI nr
Match: KAG6596882.1 (hypothetical protein SDJN03_10062, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 81.6 bits (200), Expect = 6.2e-12 Identity = 85/150 (56.67%), Postives = 89/150 (59.33%), Query Frame = 0
BLAST of Tan0001630 vs. ExPASy TrEMBL
Match: A0A6J1E5X6 (classical arabinogalactan protein 9-like OS=Cucurbita moschata OX=3662 GN=LOC111431090 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 4.1e-30 Identity = 113/161 (70.19%), Postives = 125/161 (77.64%), Query Frame = 0
BLAST of Tan0001630 vs. ExPASy TrEMBL
Match: A0A0A0L458 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017230 PE=4 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 6.8e-25 Identity = 105/160 (65.62%), Postives = 119/160 (74.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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