Tan0001449 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATATCATTGCAACCCCATCAGCTCAAAGCATGAGGAGGCTATGGAGAAGAAGAAGATACCAAAGGCTAGGAAGTAGCACTGGCCCTGTAAGATCAAGGAGCTTCAGGCTTGGGCGACTGTGGCGGATGAGACGTCGAGCTTCAAAATTGCAGTTGAAAATGGCGTCGCCGTTGAAGCTTCTGGCGAAGTTTCACGACGCATATGTCGAGATGATGATGAGGGTGGCCAACAGTGTTGGGAACATGTATGCCATTGGAGCCTTTGGCAATGGGAAGAGGATACCAAAACCTCATAATCAAGTCTCTCTGGTTTCTTGTGGTGGGGAACAAGTTGATGCCAAGTTGGTCTTGGAAGTCTATAACAAACTTGCTGCTTCCAAGAACTTGGGTGCTGCTTTTTGA ATGGATATCATTGCAACCCCATCAGCTCAAAGCATGAGGAGGCTATGGAGAAGAAGAAGATACCAAAGGCTAGGAAGTAGCACTGGCCCTGTAAGATCAAGGAGCTTCAGGCTTGGGCGACTGTGGCGGATGAGACGTCGAGCTTCAAAATTGCAGTTGAAAATGGCGTCGCCGTTGAAGCTTCTGGCGAAGTTTCACGACGCATATGTCGAGATGATGATGAGGGTGGCCAACAGTGTTGGGAACATGTATGCCATTGGAGCCTTTGGCAATGGGAAGAGGATACCAAAACCTCATAATCAAGTCTCTCTGGTTTCTTGTGGTGGGGAACAAGTTGATGCCAAGTTGGTCTTGGAAGTCTATAACAAACTTGCTGCTTCCAAGAACTTGGGTGCTGCTTTTTGA ATGGATATCATTGCAACCCCATCAGCTCAAAGCATGAGGAGGCTATGGAGAAGAAGAAGATACCAAAGGCTAGGAAGTAGCACTGGCCCTGTAAGATCAAGGAGCTTCAGGCTTGGGCGACTGTGGCGGATGAGACGTCGAGCTTCAAAATTGCAGTTGAAAATGGCGTCGCCGTTGAAGCTTCTGGCGAAGTTTCACGACGCATATGTCGAGATGATGATGAGGGTGGCCAACAGTGTTGGGAACATGTATGCCATTGGAGCCTTTGGCAATGGGAAGAGGATACCAAAACCTCATAATCAAGTCTCTCTGGTTTCTTGTGGTGGGGAACAAGTTGATGCCAAGTTGGTCTTGGAAGTCTATAACAAACTTGCTGCTTCCAAGAACTTGGGTGCTGCTTTTTGA MDIIATPSAQSMRRLWRRRRYQRLGSSTGPVRSRSFRLGRLWRMRRRASKLQLKMASPLKLLAKFHDAYVEMMMRVANSVGNMYAIGAFGNGKRIPKPHNQVSLVSCGGEQVDAKLVLEVYNKLAASKNLGAAF Homology
BLAST of Tan0001449 vs. NCBI nr
Match: KAG7016737.1 (hypothetical protein SDJN02_21847, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 225.3 bits (573), Expect = 3.1e-55 Identity = 112/130 (86.15%), Postives = 121/130 (93.08%), Query Frame = 0
BLAST of Tan0001449 vs. NCBI nr
Match: KAG6579224.1 (hypothetical protein SDJN03_23672, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 223.0 bits (567), Expect = 1.5e-54 Identity = 111/130 (85.38%), Postives = 120/130 (92.31%), Query Frame = 0
BLAST of Tan0001449 vs. NCBI nr
Match: XP_022939174.1 (uncharacterized protein LOC111445168 [Cucurbita moschata]) HSP 1 Score: 221.1 bits (562), Expect = 5.8e-54 Identity = 112/133 (84.21%), Postives = 118/133 (88.72%), Query Frame = 0
BLAST of Tan0001449 vs. NCBI nr
Match: XP_022993314.1 (uncharacterized protein LOC111489358 [Cucurbita maxima]) HSP 1 Score: 221.1 bits (562), Expect = 5.8e-54 Identity = 111/133 (83.46%), Postives = 120/133 (90.23%), Query Frame = 0
BLAST of Tan0001449 vs. NCBI nr
Match: XP_022152306.1 (uncharacterized protein LOC111020054 [Momordica charantia]) HSP 1 Score: 220.7 bits (561), Expect = 7.6e-54 Identity = 113/137 (82.48%), Postives = 123/137 (89.78%), Query Frame = 0
BLAST of Tan0001449 vs. ExPASy TrEMBL
Match: A0A6J1JZV2 (uncharacterized protein LOC111489358 OS=Cucurbita maxima OX=3661 GN=LOC111489358 PE=4 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 2.8e-54 Identity = 111/133 (83.46%), Postives = 120/133 (90.23%), Query Frame = 0
BLAST of Tan0001449 vs. ExPASy TrEMBL
Match: A0A6J1FGC7 (uncharacterized protein LOC111445168 OS=Cucurbita moschata OX=3662 GN=LOC111445168 PE=4 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 2.8e-54 Identity = 112/133 (84.21%), Postives = 118/133 (88.72%), Query Frame = 0
BLAST of Tan0001449 vs. ExPASy TrEMBL
Match: A0A6J1DHB4 (uncharacterized protein LOC111020054 OS=Momordica charantia OX=3673 GN=LOC111020054 PE=4 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 3.7e-54 Identity = 113/137 (82.48%), Postives = 123/137 (89.78%), Query Frame = 0
BLAST of Tan0001449 vs. ExPASy TrEMBL
Match: A0A6J1H4C2 (uncharacterized protein LOC111460357 OS=Cucurbita moschata OX=3662 GN=LOC111460357 PE=4 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 6.9e-53 Identity = 109/134 (81.34%), Postives = 117/134 (87.31%), Query Frame = 0
BLAST of Tan0001449 vs. ExPASy TrEMBL
Match: A0A5D3BKB9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00020 PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 8.5e-43 Identity = 102/133 (76.69%), Postives = 115/133 (86.47%), Query Frame = 0
BLAST of Tan0001449 vs. TAIR 10
Match: AT2G47485.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G62650.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 52.4 bits (124), Expect = 3.3e-07 Identity = 47/131 (35.88%), Postives = 60/131 (45.80%), Query Frame = 0
BLAST of Tan0001449 vs. TAIR 10
Match: AT3G62650.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G47485.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 45.1 bits (105), Expect = 5.3e-05 Identity = 40/125 (32.00%), Postives = 59/125 (47.20%), Query Frame = 0
BLAST of Tan0001449 vs. TAIR 10
Match: AT3G62650.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G47485.1); Has 57 Blast hits to 57 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.1 bits (105), Expect = 5.3e-05 Identity = 40/125 (32.00%), Postives = 59/125 (47.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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