Tan0001232 (gene) Snake gourd v1

Overview
NameTan0001232
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionglycine-rich protein 23-like
LocationLG04: 5021412 .. 5022080 (+)
RNA-Seq ExpressionTan0001232
SyntenyTan0001232
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAATCAATCCTATAAATCCCAACAAACCTGCTCCTACAATCACTCCAAAGGCAATGCCGGCCTTTTGTCCACCACTCAGTCCTTCTGAACCTCCTCCTCCCTTTTCATTCAATGCTAGATTCTTCGTCGGTGCCGGCGGCGGAGATGAAATGACGTCAGGTGGAGGTGCGGGGGGTGAGATGTCCGCATTGGGTGGCGGTGGACTGCTAGTTGTATTTGATGGTAGCGGCGGAGGTGGACTGTTAGTTGTGTTGGATGGCAATGGCGGCGGTGGACTGACAGTCGTATTCAACGGTGGCGGAGGTGGACTGTTAGTTATGTTGGATGGCGGCGGCGGTGGACTTTCAGTTGTGTTGGATATCGGAGGTGGAGGTGGACCATTAGTTGTGTTAGATGGCAGTGGCGGCGGTGGACTAACAGTCGTATTCAACGGTGGTGGAGGTGGACTGTTAGTTATGTTGGATGGCGGCGGCGGTGGACTTTCAGTTGTGTTGGATATCGGAGGCGGAGGTGGACCGTTAGTTGTGTTGGATGGCAGTGGCGGCGGTGGACTGACAGTCGTATTCAACGGTGGCGGAGGTGGACTATTAGTTATGTTGGATGGCGGCGGCGGCGGCGGACTTTCAGTTGTGTTGGATATCGGAGGTGGAGGTGATGCATCTTGA

mRNA sequence

ATGCAAATCAATCCTATAAATCCCAACAAACCTGCTCCTACAATCACTCCAAAGGCAATGCCGGCCTTTTGTCCACCACTCAGTCCTTCTGAACCTCCTCCTCCCTTTTCATTCAATGCTAGATTCTTCGTCGGTGCCGGCGGCGGAGATGAAATGACGTCAGGTGGAGGTGCGGGGGGTGAGATGTCCGCATTGGGTGGCGGTGGACTGCTAGTTGTATTTGATGGTAGCGGCGGAGGTGGACTGTTAGTTGTGTTGGATGGCAATGGCGGCGGTGGACTGACAGTCGTATTCAACGGTGGCGGAGGTGGACTGTTAGTTATGTTGGATGGCGGCGGCGGTGGACTTTCAGTTGTGTTGGATATCGGAGGTGGAGGTGGACCATTAGTTGTGTTAGATGGCAGTGGCGGCGGTGGACTAACAGTCGTATTCAACGGTGGTGGAGGTGGACTGTTAGTTATGTTGGATGGCGGCGGCGGTGGACTTTCAGTTGTGTTGGATATCGGAGGCGGAGGTGGACCGTTAGTTGTGTTGGATGGCAGTGGCGGCGGTGGACTGACAGTCGTATTCAACGGTGGCGGAGGTGGACTATTAGTTATGTTGGATGGCGGCGGCGGCGGCGGACTTTCAGTTGTGTTGGATATCGGAGGTGGAGGTGATGCATCTTGA

Coding sequence (CDS)

ATGCAAATCAATCCTATAAATCCCAACAAACCTGCTCCTACAATCACTCCAAAGGCAATGCCGGCCTTTTGTCCACCACTCAGTCCTTCTGAACCTCCTCCTCCCTTTTCATTCAATGCTAGATTCTTCGTCGGTGCCGGCGGCGGAGATGAAATGACGTCAGGTGGAGGTGCGGGGGGTGAGATGTCCGCATTGGGTGGCGGTGGACTGCTAGTTGTATTTGATGGTAGCGGCGGAGGTGGACTGTTAGTTGTGTTGGATGGCAATGGCGGCGGTGGACTGACAGTCGTATTCAACGGTGGCGGAGGTGGACTGTTAGTTATGTTGGATGGCGGCGGCGGTGGACTTTCAGTTGTGTTGGATATCGGAGGTGGAGGTGGACCATTAGTTGTGTTAGATGGCAGTGGCGGCGGTGGACTAACAGTCGTATTCAACGGTGGTGGAGGTGGACTGTTAGTTATGTTGGATGGCGGCGGCGGTGGACTTTCAGTTGTGTTGGATATCGGAGGCGGAGGTGGACCGTTAGTTGTGTTGGATGGCAGTGGCGGCGGTGGACTGACAGTCGTATTCAACGGTGGCGGAGGTGGACTATTAGTTATGTTGGATGGCGGCGGCGGCGGCGGACTTTCAGTTGTGTTGGATATCGGAGGTGGAGGTGATGCATCTTGA

Protein sequence

MQINPINPNKPAPTITPKAMPAFCPPLSPSEPPPPFSFNARFFVGAGGGDEMTSGGGAGGEMSALGGGGLLVVFDGSGGGGLLVVLDGNGGGGLTVVFNGGGGGLLVMLDGGGGGLSVVLDIGGGGGPLVVLDGSGGGGLTVVFNGGGGGLLVMLDGGGGGLSVVLDIGGGGGPLVVLDGSGGGGLTVVFNGGGGGLLVMLDGGGGGGLSVVLDIGGGGDAS
Homology
BLAST of Tan0001232 vs. ExPASy Swiss-Prot
Match: O48848 (Glycine-rich protein 23 OS=Arabidopsis thaliana OX=3702 GN=GRP23 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.3e-05
Identity = 84/182 (46.15%), Postives = 87/182 (47.80%), Query Frame = 0

Query: 42  FFVGAGGGDEMTSGGGAGGEMSALGGGGLLVVFDGSGGGGLLVVLDGNGGGGLTVVFNGG 101
           F  G GGG  +  GGG GG     GGGGL       GGGGL       GGGGL     GG
Sbjct: 59  FGKGLGGGGGLGGGGGLGGGGGLGGGGGL------GGGGGL------GGGGGL-----GG 118

Query: 102 GGGLLVMLDGGGGGLSVVLDIGGGGGPLVVLDGSGGGGLTVVFNGGGGGLLVMLDGG--- 161
           G GL     GGGGGL     +GGGGG    L G GGGGL     GGGGGL     GG   
Sbjct: 119 GSGL-----GGGGGLGGGSGLGGGGG----LGGGGGGGL-----GGGGGLGGGAGGGYGG 178

Query: 162 --GGGLSVVLDIGGGGGPLVVLDGSGGGGLTVVFNGGGGGLLVMLDGGGGGGLSVVLDIG 219
             GGGL     IGGGGG      G GGGG    F GG GG      GGGGG       +G
Sbjct: 179 GAGGGLGGGGGIGGGGG----FGGGGGGG----FGGGAGGGFGKGIGGGGG-------LG 194

BLAST of Tan0001232 vs. NCBI nr
Match: XP_031741791.1 (glycine-rich protein 23-like [Cucumis sativus])

HSP 1 Score: 229.2 bits (583), Expect = 3.5e-56
Identity = 154/229 (67.25%), Postives = 167/229 (72.93%), Query Frame = 0

Query: 1   MQINPINPNKPAPTITPKAMPAFCPPLSPSEPPPPFSFNARFFVGAGGGDEMTSGGGAGG 60
           MQINP NPNKP P ITP A+PAFCPPL+P EPPPPFSFNA   VG GGGDE   GGGAGG
Sbjct: 1   MQINPTNPNKPTPMITPNAIPAFCPPLNPFEPPPPFSFNAPLGVGDGGGDEPKLGGGAGG 60

Query: 61  EMSAL--GGGGLLVVFDGSGGGGLLVVLDGNGGGGLTVVF-NGGGGGLLVMLD-GGGGGL 120
           +++    GGGG LVV D  GGGG+ V LDG+GGGG +VV   GGGGG  V LD GGGGG 
Sbjct: 61  KLTVELGGGGGELVVLD--GGGGVSVALDGDGGGGASVVLAGGGGGGASVALDGGGGGGA 120

Query: 121 SVVLDIGGGGGPLVVLDGSGGGGLTVVFN-GGGGGLLVMLD-GGGGGLSVVLDIGGGGGP 180
           SV LD GGGGG  V LDG GGGG +V  + GGGGG+ V LD GGGGG SV LD GGGGG 
Sbjct: 121 SVALDGGGGGGASVALDGGGGGGASVALDGGGGGGVSVALDGGGGGGASVALDGGGGGGA 180

Query: 181 LVVLDGSGGGGLTVVFN-GGGGGLLVMLDGGGGGGLSVVLDIGGGGDAS 223
            V LDG GGGG +V  + GGGGG  V LDGGGGGG SV LD GGGG AS
Sbjct: 181 SVALDGGGGGGASVALDGGGGGGASVALDGGGGGGASVALDGGGGGGAS 227

BLAST of Tan0001232 vs. NCBI nr
Match: XP_022957272.1 (loricrin-like [Cucurbita moschata])

HSP 1 Score: 168.3 bits (425), Expect = 7.4e-38
Identity = 112/153 (73.20%), Postives = 117/153 (76.47%), Query Frame = 0

Query: 1   MQINPINPNKPAPTITPKAMPAFCPPLSPSEPPPPFSFNARFFVGAGGGDEMTSGGGAGG 60
           MQ+NP NPNKPAP ITP AMPAFCPPLSP E  PPFSFNA F  GAGGGDE+TSG GAGG
Sbjct: 1   MQMNPKNPNKPAPIITPNAMPAFCPPLSPFESAPPFSFNALFVPGAGGGDELTSGEGAGG 60

Query: 61  EMSAL-GGGGLLVVFDGSGGGGLLVVLDGNGGGGLTVVFNG-GGGGLLVMLDG-GGGGLS 120
           EM    GGGGL VVFDG GGGGL VVLDG GGGGL VV +G GGGGL V+LDG GGGGL 
Sbjct: 61  EMLVSGGGGGLSVVFDG-GGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGAGGGGLP 120

Query: 121 VVLDIGGGGGPLVVLDGSGGGGLTVVFNGGGGG 151
           VVLD GGGG         GGG  +VVFNGGGGG
Sbjct: 121 VVLDGGGGG---------GGGAPSVVFNGGGGG 143

BLAST of Tan0001232 vs. NCBI nr
Match: KAG6601160.1 (hypothetical protein SDJN03_06393, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 159.5 bits (402), Expect = 3.4e-35
Identity = 110/169 (65.09%), Postives = 118/169 (69.82%), Query Frame = 0

Query: 20  MPAFCPPLSPSEPPPPFSFNARFFVGAGGGDEMTSGGGAGGEMSALGGGGLLVVFDGSGG 79
           MPAFCPPLSP E  PPFSFNA F  GAGGGDE+TSG GAGGEM   G             
Sbjct: 1   MPAFCPPLSPFESAPPFSFNALFVPGAGGGDELTSGEGAGGEMLVSG------------- 60

Query: 80  GGLLVVLDGNGGGGLTVVFNGGGGGLLVMLD-GGGGGLSVVLDIGGGGGPLVVLDGSGGG 139
                     GGGGL+VVF+GGGGGL V+LD GGGGGL VVLD  GGGG  VVLDG+GGG
Sbjct: 61  ----------GGGGLSVVFDGGGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGAGGG 120

Query: 140 GLTVVFNG-GGGGLLVMLDG-GGGGLSVVLDIGGGGGPLVVLDGSGGGG 186
           GL VV +G GGGGL V+LDG GGGGL VVLD GGGG P VV +G GGGG
Sbjct: 121 GLPVVLDGAGGGGLPVVLDGAGGGGLPVVLDGGGGGAPSVVFNGGGGGG 146

BLAST of Tan0001232 vs. NCBI nr
Match: XP_023549817.1 (glycine-rich cell wall structural protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 159.1 bits (401), Expect = 4.5e-35
Identity = 107/153 (69.93%), Postives = 112/153 (73.20%), Query Frame = 0

Query: 1   MQINPINPNKPAPTITPKAMPAFCPPLSPSEPPPPFSFNARFFVGAGGGDEMTSGGGAGG 60
           MQ+NP NPNKPAP ITP AMPAFCPPLSP E  PPFSFNA F  GAG GDE+TSG GAGG
Sbjct: 17  MQMNPKNPNKPAPMITPNAMPAFCPPLSPFESAPPFSFNALFVAGAGAGDELTSGEGAGG 76

Query: 61  EMSALGGGGLLVVFDGSGGGGLLVVLDGNGGGGLTVVFN-GGGGGLLVMLD-GGGGGLSV 120
           EM   G           GGGGL VV DG GGGG +VVFN GGGGGL V+LD  GGGGL V
Sbjct: 77  EMLVSG-----------GGGGLSVVFDG-GGGGPSVVFNGGGGGGLPVVLDAAGGGGLPV 136

Query: 121 VLDIGGGGGPLVVLDGSGGGGL-TVVFNGGGGG 151
           VLD  GGGG  VVLDG GGGG  +VVFNGGGGG
Sbjct: 137 VLDGAGGGGLPVVLDGGGGGGAPSVVFNGGGGG 157

BLAST of Tan0001232 vs. NCBI nr
Match: XP_022990509.1 (glycine-rich cell wall structural protein 1.0-like [Cucurbita maxima])

HSP 1 Score: 157.5 bits (397), Expect = 1.3e-34
Identity = 104/150 (69.33%), Postives = 108/150 (72.00%), Query Frame = 0

Query: 3   INPINPNKPAPTITPKAMPAFCPPLSPSEPPPPFSFNARFFVGAGGGDEMTSGGGAGGEM 62
           +NP NPNKPAP ITPK MPAFCPPLSP E  PPFSFNA F VGAGGGDE TSG GAG   
Sbjct: 1   MNPKNPNKPAPIITPKPMPAFCPPLSPFESAPPFSFNASFVVGAGGGDEFTSGEGAG--- 60

Query: 63  SALGGGGLLVVFD-GSGGGGLLVVLDGNGGGGLTVVFNGGGGGLLVMLDGGGGGLSVVLD 122
              GGGG+ VVFD G GGGGL  VLDG GGGGL VV +G          GGGGGL VVLD
Sbjct: 61  ---GGGGVSVVFDGGGGGGGLPAVLDGGGGGGLPVVLDG----------GGGGGLPVVLD 120

Query: 123 IGGGGGPLVVLDGSGGGGL-TVVFNGGGGG 151
             GGGG  VVLDG GGGG  +VVFNGGGGG
Sbjct: 121 GAGGGGLPVVLDGGGGGGAPSVVFNGGGGG 134

BLAST of Tan0001232 vs. ExPASy TrEMBL
Match: A0A6J1GYP3 (loricrin-like OS=Cucurbita moschata OX=3662 GN=LOC111458710 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 3.6e-38
Identity = 112/153 (73.20%), Postives = 117/153 (76.47%), Query Frame = 0

Query: 1   MQINPINPNKPAPTITPKAMPAFCPPLSPSEPPPPFSFNARFFVGAGGGDEMTSGGGAGG 60
           MQ+NP NPNKPAP ITP AMPAFCPPLSP E  PPFSFNA F  GAGGGDE+TSG GAGG
Sbjct: 1   MQMNPKNPNKPAPIITPNAMPAFCPPLSPFESAPPFSFNALFVPGAGGGDELTSGEGAGG 60

Query: 61  EMSAL-GGGGLLVVFDGSGGGGLLVVLDGNGGGGLTVVFNG-GGGGLLVMLDG-GGGGLS 120
           EM    GGGGL VVFDG GGGGL VVLDG GGGGL VV +G GGGGL V+LDG GGGGL 
Sbjct: 61  EMLVSGGGGGLSVVFDG-GGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGAGGGGLP 120

Query: 121 VVLDIGGGGGPLVVLDGSGGGGLTVVFNGGGGG 151
           VVLD GGGG         GGG  +VVFNGGGGG
Sbjct: 121 VVLDGGGGG---------GGGAPSVVFNGGGGG 143

BLAST of Tan0001232 vs. ExPASy TrEMBL
Match: A0A6J1JS83 (glycine-rich cell wall structural protein 1.0-like OS=Cucurbita maxima OX=3661 GN=LOC111487352 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 6.3e-35
Identity = 104/150 (69.33%), Postives = 108/150 (72.00%), Query Frame = 0

Query: 3   INPINPNKPAPTITPKAMPAFCPPLSPSEPPPPFSFNARFFVGAGGGDEMTSGGGAGGEM 62
           +NP NPNKPAP ITPK MPAFCPPLSP E  PPFSFNA F VGAGGGDE TSG GAG   
Sbjct: 1   MNPKNPNKPAPIITPKPMPAFCPPLSPFESAPPFSFNASFVVGAGGGDEFTSGEGAG--- 60

Query: 63  SALGGGGLLVVFD-GSGGGGLLVVLDGNGGGGLTVVFNGGGGGLLVMLDGGGGGLSVVLD 122
              GGGG+ VVFD G GGGGL  VLDG GGGGL VV +G          GGGGGL VVLD
Sbjct: 61  ---GGGGVSVVFDGGGGGGGLPAVLDGGGGGGLPVVLDG----------GGGGGLPVVLD 120

Query: 123 IGGGGGPLVVLDGSGGGGL-TVVFNGGGGG 151
             GGGG  VVLDG GGGG  +VVFNGGGGG
Sbjct: 121 GAGGGGLPVVLDGGGGGGAPSVVFNGGGGG 134

BLAST of Tan0001232 vs. ExPASy TrEMBL
Match: A0A1S4DW63 (loricrin-like OS=Cucumis melo OX=3656 GN=LOC103489470 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 9.1e-34
Identity = 100/149 (67.11%), Postives = 119/149 (79.87%), Query Frame = 0

Query: 51  EMTSGGGAGGEMSAL-GGGGLLVVFDGSGGGGLLVVLDGNGGGGLTVVFN-GGGGGLLVM 110
           E   GGG G E+  L GGGG+ VV DG GGGG+ VV DG GGGG++VVF+ GGGGG+ V+
Sbjct: 3   EFGGGGGGGDELVVLDGGGGVSVVLDG-GGGGVSVVFDGGGGGGVSVVFDGGGGGGVSVV 62

Query: 111 LD-GGGGGLSVVLDIGGGGGPLVVLDGSGGGGLTVVFNGGGGGLLVMLDGGGGGLSVVLD 170
            D GGGGG+SVV D GGGGG LVVLDG GGGG++VVF+GGGGG+ V+ DGGGGG+SV+LD
Sbjct: 63  FDGGGGGGVSVVFDGGGGGGVLVVLDGGGGGGVSVVFDGGGGGVSVVFDGGGGGVSVMLD 122

Query: 171 IGGGGGPLVVLDGSGGGGLTVVFNGGGGG 197
            GGGGG  VVLDG GGGG++V  +GGGGG
Sbjct: 123 GGGGGGVSVVLDGGGGGGVSVGLDGGGGG 150

BLAST of Tan0001232 vs. ExPASy TrEMBL
Match: A0A6I8U367 (Uncharacterized protein OS=Aedes aegypti OX=7159 GN=110675136 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.8e-18
Identity = 89/184 (48.37%), Postives = 111/184 (60.33%), Query Frame = 0

Query: 45  GAGGG--DEMTSGGGAGGEMSAL---GGGGLLVVFDGSGGGGLLVVLDGNGGGGLTVVFN 104
           G GGG     + GGG GG +S     GGGG++V   G GGGG++V   G GGGG+    +
Sbjct: 13  GGGGGVVVSQSHGGGGGGVVSQSHGGGGGGVVVQSHGGGGGGIVVQSHGRGGGGVVSQSH 72

Query: 105 GGGGGLLVMLDGGGGGLSVVLDI--GGGGGPLVVLDGSGGGGLTVVFNGGGGGLLVMLDG 164
           GGGGG +V+   GGGG  VV+    GGGGG +    G GGGG+ V  +GGGGG +V    
Sbjct: 73  GGGGGGVVVQSQGGGGSGVVVQSHGGGGGGVVSQSHGGGGGGVVVQSHGGGGGGVVSQSH 132

Query: 165 GGGGLSVVLDI--GGGGGPLVVLDGSGGGGLTVVFNGGGGGLLVMLDGGGGGGLSVVLDI 220
           GGGG  VV+    GGGGG +V   G GGGG+ V  +GGGGG +V+   GGGGG+ V    
Sbjct: 133 GGGGGGVVVQSHGGGGGGVVVQSHGGGGGGVVVQSHGGGGGGVVVQSQGGGGGVVVSQSH 192

BLAST of Tan0001232 vs. ExPASy TrEMBL
Match: A0A6I8T397 (Cysteine-rich venom protein, putative OS=Aedes aegypti OX=7159 GN=110675135 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.7e-16
Identity = 86/180 (47.78%), Postives = 104/180 (57.78%), Query Frame = 0

Query: 46  AGGGDEMTSGGGAGG---EMSALGGGGLLVVFDGSGGGGLLVVLDGNGGGGLTVVFNGGG 105
           A G    + GGG GG   +    GGGG++    G GGGG++V   G GGGG+ V   GGG
Sbjct: 55  AAGVVAQSQGGGGGGVVVQSQGGGGGGVVSQTHGGGGGGVVVQSQGGGGGGVVVQSQGGG 114

Query: 106 GGLLVMLDGGGGGLSVVLDIGGGGGPLVVLDGSGGGGLTVVFNGGGG-GLLVMLDGGGGG 165
           G       GGGGG+ V    GGGGG +V   G GGGG+ V  +GGGG G+++   GGGGG
Sbjct: 115 G-------GGGGGVVVQSQGGGGGGVVVQSQGGGGGGVVVQSHGGGGEGVVMQSHGGGGG 174

Query: 166 LSVVLDIGGGGGPLVVLDGSGGGGLTV--VFNGGGGGLLVMLDGGGGGGLSVVLDIGGGG 220
             VV   GGGGG +VV    GGGG  V     GGGGG++V   GGGGGG+ V    GGGG
Sbjct: 175 GVVVQSHGGGGGGVVVQSHGGGGGRVVSQSHGGGGGGVVVQSHGGGGGGVIVQSHGGGGG 227

BLAST of Tan0001232 vs. TAIR 10
Match: AT2G32690.1 (glycine-rich protein 23 )

HSP 1 Score: 50.8 bits (120), Expect = 1.6e-06
Identity = 84/182 (46.15%), Postives = 87/182 (47.80%), Query Frame = 0

Query: 42  FFVGAGGGDEMTSGGGAGGEMSALGGGGLLVVFDGSGGGGLLVVLDGNGGGGLTVVFNGG 101
           F  G GGG  +  GGG GG     GGGGL       GGGGL       GGGGL     GG
Sbjct: 59  FGKGLGGGGGLGGGGGLGGGGGLGGGGGL------GGGGGL------GGGGGL-----GG 118

Query: 102 GGGLLVMLDGGGGGLSVVLDIGGGGGPLVVLDGSGGGGLTVVFNGGGGGLLVMLDGG--- 161
           G GL     GGGGGL     +GGGGG    L G GGGGL     GGGGGL     GG   
Sbjct: 119 GSGL-----GGGGGLGGGSGLGGGGG----LGGGGGGGL-----GGGGGLGGGAGGGYGG 178

Query: 162 --GGGLSVVLDIGGGGGPLVVLDGSGGGGLTVVFNGGGGGLLVMLDGGGGGGLSVVLDIG 219
             GGGL     IGGGGG      G GGGG    F GG GG      GGGGG       +G
Sbjct: 179 GAGGGLGGGGGIGGGGG----FGGGGGGG----FGGGAGGGFGKGIGGGGG-------LG 194

BLAST of Tan0001232 vs. TAIR 10
Match: AT2G32690.3 (glycine-rich protein 23 )

HSP 1 Score: 49.7 bits (117), Expect = 3.6e-06
Identity = 82/177 (46.33%), Postives = 85/177 (48.02%), Query Frame = 0

Query: 42  FFVGAGGGDEMTSGGGAGGEMSALGGGGLLVVFDGSGGGGLLVVLDGNGGGGLTVVFNGG 101
           F  G GGG  +  GGG GG     GGGGL       GGGGL       GGGGL     GG
Sbjct: 59  FGKGLGGGGGLGGGGGLGGGGGLGGGGGL------GGGGGL------GGGGGL-----GG 118

Query: 102 GGGLLVMLDGGGGGLSVVLDIGGGGGPLVVLDGSGGGGLTVVFNGGGGGLLVMLDGGGGG 161
           G GL     GGGGGL     +GGGGG    L G GGGGL     GGGGG      G GGG
Sbjct: 119 GSGL-----GGGGGLGGGSGLGGGGG----LGGGGGGGL-----GGGGG---YGGGAGGG 178

Query: 162 LSVVLDIGGGGGPLVVLDGSGGGGLTVVFNGGGGGLLVMLDGGGGGGLSVVLDIGGG 219
           L     IGGGGG      G GGGG    F GG GG      GGGGG       +GGG
Sbjct: 179 LGGGGGIGGGGG----FGGGGGGG----FGGGAGGGFGKGIGGGGG-------LGGG 186

BLAST of Tan0001232 vs. TAIR 10
Match: AT2G32690.2 (glycine-rich protein 23 )

HSP 1 Score: 47.4 bits (111), Expect = 1.8e-05
Identity = 77/166 (46.39%), Postives = 80/166 (48.19%), Query Frame = 0

Query: 42  FFVGAGGGDEMTSGGGAGGEMSALGGGGLLVVFDGSGGGGLLVVLDGNGGGGLTVVFNGG 101
           F  G GGG  +  GGG GG     GGGGL       GGGGL       GGGGL     GG
Sbjct: 59  FGKGLGGGGGLGGGGGLGGGGGLGGGGGL------GGGGGL------GGGGGL-----GG 118

Query: 102 GGGLLVMLDGGGGGLSVVLDIGGGGGPLVVLDGSGGGGLTVVFNGGGGGLLVMLDGGGGG 161
           G GL     GGGGGL     +GGGGG    L G  GGG    + GG GG L    GGGGG
Sbjct: 119 GSGL-----GGGGGLGGGSGLGGGGG----LGGGLGGGAGGGYGGGAGGGL----GGGGG 178

Query: 162 LSVVLDIGGGGGPLVVLDGSGGGGLTVVFNGGGGGLLVMLDGGGGG 208
                 IGGGGG      G GGGG    F GG GG      GGGGG
Sbjct: 179 ------IGGGGG----FGGGGGGG----FGGGAGGGFGKGIGGGGG 180

BLAST of Tan0001232 vs. TAIR 10
Match: AT2G32690.4 (glycine-rich protein 23 )

HSP 1 Score: 42.7 bits (99), Expect = 4.4e-04
Identity = 69/153 (45.10%), Postives = 72/153 (47.06%), Query Frame = 0

Query: 42  FFVGAGGGDEMTSGGGAGGEMSALGGGGLLVVFDGSGGGGLLVVLDGNGGGGLTVVFNGG 101
           F  G GGG  +  GGG GG     GGGGL       GGGGL       GGGGL     GG
Sbjct: 59  FGKGLGGGGGLGGGGGLGGGGGLGGGGGL------GGGGGL------GGGGGL-----GG 118

Query: 102 GGGLLVMLDGGGGGLSVVLDIGGGGGPLVVLDGSGGGGLTVVFNGGGGGLLVMLDGGGGG 161
           G GL     GGGGGL     +GGGGG    L G GGGGL      GGGG      GGGGG
Sbjct: 119 GSGL-----GGGGGLGGGSGLGGGGG----LGGGGGGGL------GGGG----FGGGGGG 170

Query: 162 LSVVLDIGGGGGPLVVLDGSGGGGLTVVFNGGG 195
                  GGG G        GGGGL   + GGG
Sbjct: 179 -----GFGGGAGGGFGKGIGGGGGLGGGYVGGG 170

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
O488482.3e-0546.15Glycine-rich protein 23 OS=Arabidopsis thaliana OX=3702 GN=GRP23 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
XP_031741791.13.5e-5667.25glycine-rich protein 23-like [Cucumis sativus][more]
XP_022957272.17.4e-3873.20loricrin-like [Cucurbita moschata][more]
KAG6601160.13.4e-3565.09hypothetical protein SDJN03_06393, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023549817.14.5e-3569.93glycine-rich cell wall structural protein-like [Cucurbita pepo subsp. pepo][more]
XP_022990509.11.3e-3469.33glycine-rich cell wall structural protein 1.0-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
A0A6J1GYP33.6e-3873.20loricrin-like OS=Cucurbita moschata OX=3662 GN=LOC111458710 PE=4 SV=1[more]
A0A6J1JS836.3e-3569.33glycine-rich cell wall structural protein 1.0-like OS=Cucurbita maxima OX=3661 G... [more]
A0A1S4DW639.1e-3467.11loricrin-like OS=Cucumis melo OX=3656 GN=LOC103489470 PE=4 SV=1[more]
A0A6I8U3671.8e-1848.37Uncharacterized protein OS=Aedes aegypti OX=7159 GN=110675136 PE=4 SV=1[more]
A0A6I8T3971.7e-1647.78Cysteine-rich venom protein, putative OS=Aedes aegypti OX=7159 GN=110675135 PE=4... [more]
Match NameE-valueIdentityDescription
AT2G32690.11.6e-0646.15glycine-rich protein 23 [more]
AT2G32690.33.6e-0646.33glycine-rich protein 23 [more]
AT2G32690.21.8e-0546.39glycine-rich protein 23 [more]
AT2G32690.44.4e-0445.10glycine-rich protein 23 [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..31
NoneNo IPR availableSUPERFAMILY82171DPP6 N-terminal domain-likecoord: 68..208

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0001232.1Tan0001232.1mRNA