Tan0001232 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAATCAATCCTATAAATCCCAACAAACCTGCTCCTACAATCACTCCAAAGGCAATGCCGGCCTTTTGTCCACCACTCAGTCCTTCTGAACCTCCTCCTCCCTTTTCATTCAATGCTAGATTCTTCGTCGGTGCCGGCGGCGGAGATGAAATGACGTCAGGTGGAGGTGCGGGGGGTGAGATGTCCGCATTGGGTGGCGGTGGACTGCTAGTTGTATTTGATGGTAGCGGCGGAGGTGGACTGTTAGTTGTGTTGGATGGCAATGGCGGCGGTGGACTGACAGTCGTATTCAACGGTGGCGGAGGTGGACTGTTAGTTATGTTGGATGGCGGCGGCGGTGGACTTTCAGTTGTGTTGGATATCGGAGGTGGAGGTGGACCATTAGTTGTGTTAGATGGCAGTGGCGGCGGTGGACTAACAGTCGTATTCAACGGTGGTGGAGGTGGACTGTTAGTTATGTTGGATGGCGGCGGCGGTGGACTTTCAGTTGTGTTGGATATCGGAGGCGGAGGTGGACCGTTAGTTGTGTTGGATGGCAGTGGCGGCGGTGGACTGACAGTCGTATTCAACGGTGGCGGAGGTGGACTATTAGTTATGTTGGATGGCGGCGGCGGCGGCGGACTTTCAGTTGTGTTGGATATCGGAGGTGGAGGTGATGCATCTTGA ATGCAAATCAATCCTATAAATCCCAACAAACCTGCTCCTACAATCACTCCAAAGGCAATGCCGGCCTTTTGTCCACCACTCAGTCCTTCTGAACCTCCTCCTCCCTTTTCATTCAATGCTAGATTCTTCGTCGGTGCCGGCGGCGGAGATGAAATGACGTCAGGTGGAGGTGCGGGGGGTGAGATGTCCGCATTGGGTGGCGGTGGACTGCTAGTTGTATTTGATGGTAGCGGCGGAGGTGGACTGTTAGTTGTGTTGGATGGCAATGGCGGCGGTGGACTGACAGTCGTATTCAACGGTGGCGGAGGTGGACTGTTAGTTATGTTGGATGGCGGCGGCGGTGGACTTTCAGTTGTGTTGGATATCGGAGGTGGAGGTGGACCATTAGTTGTGTTAGATGGCAGTGGCGGCGGTGGACTAACAGTCGTATTCAACGGTGGTGGAGGTGGACTGTTAGTTATGTTGGATGGCGGCGGCGGTGGACTTTCAGTTGTGTTGGATATCGGAGGCGGAGGTGGACCGTTAGTTGTGTTGGATGGCAGTGGCGGCGGTGGACTGACAGTCGTATTCAACGGTGGCGGAGGTGGACTATTAGTTATGTTGGATGGCGGCGGCGGCGGCGGACTTTCAGTTGTGTTGGATATCGGAGGTGGAGGTGATGCATCTTGA ATGCAAATCAATCCTATAAATCCCAACAAACCTGCTCCTACAATCACTCCAAAGGCAATGCCGGCCTTTTGTCCACCACTCAGTCCTTCTGAACCTCCTCCTCCCTTTTCATTCAATGCTAGATTCTTCGTCGGTGCCGGCGGCGGAGATGAAATGACGTCAGGTGGAGGTGCGGGGGGTGAGATGTCCGCATTGGGTGGCGGTGGACTGCTAGTTGTATTTGATGGTAGCGGCGGAGGTGGACTGTTAGTTGTGTTGGATGGCAATGGCGGCGGTGGACTGACAGTCGTATTCAACGGTGGCGGAGGTGGACTGTTAGTTATGTTGGATGGCGGCGGCGGTGGACTTTCAGTTGTGTTGGATATCGGAGGTGGAGGTGGACCATTAGTTGTGTTAGATGGCAGTGGCGGCGGTGGACTAACAGTCGTATTCAACGGTGGTGGAGGTGGACTGTTAGTTATGTTGGATGGCGGCGGCGGTGGACTTTCAGTTGTGTTGGATATCGGAGGCGGAGGTGGACCGTTAGTTGTGTTGGATGGCAGTGGCGGCGGTGGACTGACAGTCGTATTCAACGGTGGCGGAGGTGGACTATTAGTTATGTTGGATGGCGGCGGCGGCGGCGGACTTTCAGTTGTGTTGGATATCGGAGGTGGAGGTGATGCATCTTGA MQINPINPNKPAPTITPKAMPAFCPPLSPSEPPPPFSFNARFFVGAGGGDEMTSGGGAGGEMSALGGGGLLVVFDGSGGGGLLVVLDGNGGGGLTVVFNGGGGGLLVMLDGGGGGLSVVLDIGGGGGPLVVLDGSGGGGLTVVFNGGGGGLLVMLDGGGGGLSVVLDIGGGGGPLVVLDGSGGGGLTVVFNGGGGGLLVMLDGGGGGGLSVVLDIGGGGDAS Homology
BLAST of Tan0001232 vs. ExPASy Swiss-Prot
Match: O48848 (Glycine-rich protein 23 OS=Arabidopsis thaliana OX=3702 GN=GRP23 PE=2 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 2.3e-05 Identity = 84/182 (46.15%), Postives = 87/182 (47.80%), Query Frame = 0
BLAST of Tan0001232 vs. NCBI nr
Match: XP_031741791.1 (glycine-rich protein 23-like [Cucumis sativus]) HSP 1 Score: 229.2 bits (583), Expect = 3.5e-56 Identity = 154/229 (67.25%), Postives = 167/229 (72.93%), Query Frame = 0
BLAST of Tan0001232 vs. NCBI nr
Match: XP_022957272.1 (loricrin-like [Cucurbita moschata]) HSP 1 Score: 168.3 bits (425), Expect = 7.4e-38 Identity = 112/153 (73.20%), Postives = 117/153 (76.47%), Query Frame = 0
BLAST of Tan0001232 vs. NCBI nr
Match: KAG6601160.1 (hypothetical protein SDJN03_06393, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 159.5 bits (402), Expect = 3.4e-35 Identity = 110/169 (65.09%), Postives = 118/169 (69.82%), Query Frame = 0
BLAST of Tan0001232 vs. NCBI nr
Match: XP_023549817.1 (glycine-rich cell wall structural protein-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 159.1 bits (401), Expect = 4.5e-35 Identity = 107/153 (69.93%), Postives = 112/153 (73.20%), Query Frame = 0
BLAST of Tan0001232 vs. NCBI nr
Match: XP_022990509.1 (glycine-rich cell wall structural protein 1.0-like [Cucurbita maxima]) HSP 1 Score: 157.5 bits (397), Expect = 1.3e-34 Identity = 104/150 (69.33%), Postives = 108/150 (72.00%), Query Frame = 0
BLAST of Tan0001232 vs. ExPASy TrEMBL
Match: A0A6J1GYP3 (loricrin-like OS=Cucurbita moschata OX=3662 GN=LOC111458710 PE=4 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 3.6e-38 Identity = 112/153 (73.20%), Postives = 117/153 (76.47%), Query Frame = 0
BLAST of Tan0001232 vs. ExPASy TrEMBL
Match: A0A6J1JS83 (glycine-rich cell wall structural protein 1.0-like OS=Cucurbita maxima OX=3661 GN=LOC111487352 PE=4 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 6.3e-35 Identity = 104/150 (69.33%), Postives = 108/150 (72.00%), Query Frame = 0
BLAST of Tan0001232 vs. ExPASy TrEMBL
Match: A0A1S4DW63 (loricrin-like OS=Cucumis melo OX=3656 GN=LOC103489470 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 9.1e-34 Identity = 100/149 (67.11%), Postives = 119/149 (79.87%), Query Frame = 0
BLAST of Tan0001232 vs. ExPASy TrEMBL
Match: A0A6I8U367 (Uncharacterized protein OS=Aedes aegypti OX=7159 GN=110675136 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 1.8e-18 Identity = 89/184 (48.37%), Postives = 111/184 (60.33%), Query Frame = 0
BLAST of Tan0001232 vs. ExPASy TrEMBL
Match: A0A6I8T397 (Cysteine-rich venom protein, putative OS=Aedes aegypti OX=7159 GN=110675135 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 1.7e-16 Identity = 86/180 (47.78%), Postives = 104/180 (57.78%), Query Frame = 0
BLAST of Tan0001232 vs. TAIR 10
Match: AT2G32690.1 (glycine-rich protein 23 ) HSP 1 Score: 50.8 bits (120), Expect = 1.6e-06 Identity = 84/182 (46.15%), Postives = 87/182 (47.80%), Query Frame = 0
BLAST of Tan0001232 vs. TAIR 10
Match: AT2G32690.3 (glycine-rich protein 23 ) HSP 1 Score: 49.7 bits (117), Expect = 3.6e-06 Identity = 82/177 (46.33%), Postives = 85/177 (48.02%), Query Frame = 0
BLAST of Tan0001232 vs. TAIR 10
Match: AT2G32690.2 (glycine-rich protein 23 ) HSP 1 Score: 47.4 bits (111), Expect = 1.8e-05 Identity = 77/166 (46.39%), Postives = 80/166 (48.19%), Query Frame = 0
BLAST of Tan0001232 vs. TAIR 10
Match: AT2G32690.4 (glycine-rich protein 23 ) HSP 1 Score: 42.7 bits (99), Expect = 4.4e-04 Identity = 69/153 (45.10%), Postives = 72/153 (47.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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