Homology
BLAST of Tan0001219 vs. ExPASy Swiss-Prot
Match:
Q9LQV2 (RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=RDR1 PE=2 SV=1)
HSP 1 Score: 1422.5 bits (3681), Expect = 0.0e+00
Identity = 721/1133 (63.64%), Postives = 859/1133 (75.82%), Query Frame = 0
Query: 1 MGRTVHINGFPSHVTADAVKIFLEGHTGVGTVYAIKVRPPKRGGTRVYAIVQFTGAAQAE 60
MG+T+ + GFP+ V+A+ VK FLE TG GTVYAIKVR PK+GG RVYAIVQFT
Sbjct: 1 MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGPRVYAIVQFTSERHTR 60
Query: 61 SIISLANRRLWYGSSYLKARVADVDIVPKPRTYVHTLENLTLCFGCQVSGERFHVLWEGG 120
II+ A RL+YG SYLKA + DIVPKPR +HT+ L + FGCQVS ++F LW
Sbjct: 61 LIITAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTLWSAQ 120
Query: 121 VDLVTFGIGMRKMNFCLIHNFVEYRLELSYENIWQIQLHHPQHQSMKYLLIQLYGAPRIY 180
V+FGIGMRK++F +YRLELSYENIWQI LH PQ +S K+L+IQ+ GAP+I+
Sbjct: 121 DVCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAPKIF 180
Query: 181 KKVAPSSGQVFDDPHLNFFKEVPDDQWVRTDDFTPSCSIGQSSSLCLKLPNGRQLPNFRQ 240
+K +F ++F+ + D+QW+RT DFT S IGQS++ CL+LP +P+FR+
Sbjct: 181 EKEDQPINLLFG--IMDFYSDGSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNVPDFRE 240
Query: 241 NFAYYEEFENEFELVDGGDGFSCSKD-LVPMVDSRPNVFLPYEIIFKVNVLVQNGCIPGP 300
NFA Y E L++ G +S + + LVP+VD P LP+EI+FK+N LVQN C+ GP
Sbjct: 241 NFANYAEHRASSFLIESGSSYSSNANTLVPVVDPPPGFSLPFEILFKLNTLVQNACLSGP 300
Query: 301 LLDTGFYRLVDPSRIRIEFVEHALEKLFHLKECSYEPSSFLTEQYRKY--SRHPPNSPAI 360
LD FYRL++ + ++H LEKLFHL EC YEP+ +L ++Y+K+ P SP I
Sbjct: 301 ALDLDFYRLLNQKKYDRALIDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGKLPLSPTI 360
Query: 361 SLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRQFPQDIDNFLRVTFVDEEWDKMRSID 420
SLD GLVY+ RVQ+TP +VYF GPEVNVSNRVLR + + I+NFLRV+FVDE+ +K+RS+D
Sbjct: 361 SLDDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVRSMD 420
Query: 421 LLPRMSSTIKDGKTDIYSRILSVLRNGIVIGAKNFEFLAFSSSQLRDNSLWMFASRPGLD 480
L PR S+ +T +Y RI SVLR+GIVIG K FEFLAFSSSQLR+NS WMFA +
Sbjct: 421 LSPRSST---QRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIDRIT 480
Query: 481 AAAIREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFS 540
AA IR WMGDF HI+N AKYAARLGQSF SS ETL+V E E+IPD+E+ +YVFS
Sbjct: 481 AAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGTRYVFS 540
Query: 541 DGIGKISSDFAKRVAAKCSLQAFTPSAFQIRYGGYKGVVAVDPLSSIKLSLRNSMCKFES 600
DGIGKIS++FA++VA KC L F+PSAFQIRYGGYKGVVAVDP SS KLSLR SM KFES
Sbjct: 541 DGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSMSKFES 600
Query: 601 DNTKLDVLGYSKYQPCFLNRQVITLLSTLGVKDEVFEKKQREAVEQLDAILTDPLRAQEA 660
+NTKLDVL +SKYQPC++NRQ+ITLLSTLGV D VFEKKQRE V++LDAILT PL A EA
Sbjct: 601 ENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPLEAHEA 660
Query: 661 LELMSPGENTNILKEMLKCGYKPDIEPYLSMMLQTFRASKLLELRTKSRIFIPDGRAVMG 720
L LM+PGENTNILK ++ CGYKPD EP+LSMMLQ FRASKLLELRTK+RIFI GR++MG
Sbjct: 661 LGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGGRSMMG 720
Query: 721 CLDETGTLEYGQVFVQISSARHRNLSDTFAFNMRGSERCLVIEGNVIVAKNPCLHPGDVR 780
CLDET TLEYGQV VQ S MR R +I G V+VAKNPCLHPGDVR
Sbjct: 721 CLDETRTLEYGQVVVQYSDP------------MRPGRR-FIITGPVVVAKNPCLHPGDVR 780
Query: 781 VLRAVNIPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQVLPMDY 840
VL+AVN+P L HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD EL+PPR PMDY
Sbjct: 781 VLQAVNVPALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPPRTSEPMDY 840
Query: 841 TPAPPIQLDRDVRIEDVQEYFVNYMVNDSLGIIANAHTAFADKESFKARSSPCLELAKLF 900
TP P LD DV IE+V+EYF NY+VNDSLGIIANAHTAFADKE KA S PC+ELAK F
Sbjct: 841 TPEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELAKKF 900
Query: 901 SIAVDFPKTGVPAIIPSHLNVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPTVSYIR 960
S AVDFPKTGV A+IP HL VKE+PDFMEKPD+P+YESKNVIGKLFR VK+ AP + I+
Sbjct: 901 STAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERAPPLISIK 960
Query: 961 SFTRDVAMQCYDFDMEVEGFEDYVEDAFYHKNNYDYKLGNLLDYYGIKSEAEILSGSIMR 1020
SFT DVA + YD DMEV+GFE+YV++AFY K NYD+KLGNL+DYYGIK+EAEILSG IMR
Sbjct: 961 SFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGGIMR 1020
Query: 1021 MSKSFTRRRDAEAINLAVRSLRKEARTWFNAKESGPDSGSDDLFAKASAWYHVTYHHSYW 1080
MSKSFT+RRDAE+I AVR+LRKE + FNA E ++ AKASAWYHVTYH SYW
Sbjct: 1021 MSKSFTKRRDAESIGRAVRALRKETLSLFNASEE-----EENESAKASAWYHVTYHSSYW 1080
Query: 1081 GCYNEGTKRDHYLSFPWCVYDKLMQIKENNLRRRERASRMATLDRFGSVLNLG 1131
G YNEG RDH+LSF WCVYDKL++IK+ NL RR+ R TL+R VL G
Sbjct: 1081 GLYNEGLNRDHFLSFAWCVYDKLVRIKKTNLGRRQ---RQETLERLDHVLRFG 1107
BLAST of Tan0001219 vs. ExPASy Swiss-Prot
Match:
Q0DXS3 (Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR1 PE=2 SV=2)
HSP 1 Score: 972.6 bits (2513), Expect = 3.8e-282
Identity = 482/731 (65.94%), Postives = 581/731 (79.48%), Query Frame = 0
Query: 376 VYFCGPEVNVSNRVLRQFPQDIDNFLRVTFVDEEWDKMRSIDLLPRMSSTIKDGKTDIYS 435
VYF GPE+NVSNRV+R F DI+NFLR++FVDE+ +K+R+ DL PR +S +T +Y
Sbjct: 9 VYFYGPEINVSNRVVRNFSSDIENFLRISFVDEDCEKLRATDLSPRSASGHDANRTALYK 68
Query: 436 RILSVLRNGIVIGAKNFEFLAFSSSQLRDNSLWMFASRPGLDAAAIREWMGDFRHIKNPA 495
R+LSVL +GI IG KNFEFLAFSSSQLRDNS WMFASR GL A+ IR WMGDFR+I+N A
Sbjct: 69 RVLSVLSDGITIGGKNFEFLAFSSSQLRDNSAWMFASRQGLAASDIRTWMGDFRNIRNVA 128
Query: 496 KYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDGIGKISSDFAKRVAAKC 555
KYAARLGQSF SSTETL V ++E E I DI+ ++VFSDGIGKISS FA VA KC
Sbjct: 129 KYAARLGQSFSSSTETLKVQKYEVEEISDIK---NGTQHVFSDGIGKISSAFANEVAMKC 188
Query: 556 SLQAFTPSAFQIRYGGYKGVVAVDPLSSIKLSLRNSMCKFESDNTKLDVLGYSKYQPCFL 615
+L+ F PSAFQIRYGGYKGVVAVDP S KLSLR SM KF+SDN +DVL YSKYQP FL
Sbjct: 189 NLKRFAPSAFQIRYGGYKGVVAVDPTSRWKLSLRKSMLKFQSDNITVDVLAYSKYQPGFL 248
Query: 616 NRQVITLLSTLGVKDEVFEKKQREAVEQLDAILTDPLRAQEALELMSPGENTNILKEMLK 675
NRQ+ITLLSTLGV+D VFE+KQ EAV QL+ ++TDP A EA+ELM GE TN +KE+L
Sbjct: 249 NRQLITLLSTLGVRDSVFEQKQEEAVNQLNKMVTDPQAAIEAIELMPMGEITNAVKELLL 308
Query: 676 CGYKPDIEPYLSMMLQTFRASKLLELRTKSRIFIPDGRAVMGCLDETGTLEYGQVFVQIS 735
CGY+PD EPYLSM+LQTFRASKLLEL+TKSRI IP GRA+MGCLDET TL+YGQVF++ +
Sbjct: 309 CGYQPDDEPYLSMLLQTFRASKLLELKTKSRILIPKGRAMMGCLDETRTLKYGQVFIRAT 368
Query: 736 SARHRNLSDTFAFNMRGSERCLVIEGNVIVAKNPCLHPGDVRVLRAVNIPRLYHMVDCVV 795
S + N D F + G V++AKNPCLHPGD+R+L AV++P L+HM +CVV
Sbjct: 369 SGVNDN--DRF-----------TVTGKVVIAKNPCLHPGDIRILHAVDVPVLHHMFNCVV 428
Query: 796 FPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQVLPMDYTPAPPIQLDRDVRIEDVQ 855
FPQ+G RPHPNECSGSDLDGDIYFV WD LIPPR V PMDYTPAP LD DV IE+V+
Sbjct: 429 FPQQGPRPHPNECSGSDLDGDIYFVSWDPSLIPPRMVTPMDYTPAPTETLDHDVTIEEVE 488
Query: 856 EYFVNYMVNDSLGIIANAHTAFADKESFKARSSPCLELAKLFSIAVDFPKTGVPAIIPSH 915
EYF NY+VN+SLG+IANAH FADKE KA SSPC+ELAKLFSIAVDFPKTGVPA+IP
Sbjct: 489 EYFTNYIVNESLGMIANAHVVFADKEDLKAESSPCIELAKLFSIAVDFPKTGVPALIPPE 548
Query: 916 LNVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPTVSYIRSFTRDVAMQCYDFDMEVE 975
L+VKE+PDFMEK D+ +YESK VIGKL+R +K P +I+ FTR+VA + YD DM V+
Sbjct: 549 LHVKEYPDFMEKLDKVTYESKGVIGKLYREIKKHTP---HIKHFTREVARRSYDTDMIVD 608
Query: 976 GFEDYVEDAFYHKNNYDYKLGNLLDYYGIKSEAEILSGSIMRMSKSFTRRRDAEAINLAV 1035
G+EDY+ +A K+ YD+KLGNL+D+YGIKSEAEI+SG I++M+K+FT++ DA+AI LAV
Sbjct: 609 GYEDYITEAMALKDEYDFKLGNLMDHYGIKSEAEIISGCILKMAKNFTKKSDADAIRLAV 668
Query: 1036 RSLRKEARTWFNAKESGPDS-GSDDLFAKASAWYHVTYHHSYWGCYNEGTKRDHYLSFPW 1095
RSLRKEAR+ F+ + G D AKASAWYHVTYH +WGCYNEG +R H++SFPW
Sbjct: 669 RSLRKEARSRFSEMSLDDNGHGHDASEAKASAWYHVTYHPEFWGCYNEGYERPHFISFPW 720
Query: 1096 CVYDKLMQIKE 1106
C+Y+KL++IK+
Sbjct: 729 CIYEKLLRIKQ 720
BLAST of Tan0001219 vs. ExPASy Swiss-Prot
Match:
O82504 (RNA-dependent RNA polymerase 2 OS=Arabidopsis thaliana OX=3702 GN=RDR2 PE=1 SV=1)
HSP 1 Score: 761.1 bits (1964), Expect = 1.7e-218
Identity = 450/1133 (39.72%), Postives = 661/1133 (58.34%), Query Frame = 0
Query: 4 TVHINGFPSHVTADAVKIFLEGHTGVGTVYAIKVRPPKRGG--TRVYAIVQFTG-AAQAE 63
TV I+ P + AD + FLE H G TV+A+++ P R R +A VQFT ++
Sbjct: 11 TVKISNVPQTIVADELLRFLELHLGEDTVFALEI-PTTRDNWKPRDFARVQFTTLEVKSR 70
Query: 64 SIISLANRRLWYGSSYLKARVADVDIVPKPRTYVHTLENLTLCFGCQVSGE-RFHVL--W 123
+ + + +L + + L+ A DI+P+P L+++ L G S E RF L W
Sbjct: 71 AQLLSSQSKLLFKTHNLRLSEAYDDIIPRPVDPRKRLDDIVLTVGFPESDEKRFCALEKW 130
Query: 124 EGGVDLVTFGIGMRKMNFCLIHNFVEYRLELSYENIWQIQ--LHHPQHQSMKYLLIQLYG 183
+G + R++ F + + Y++E+ +E+I + + + L++L
Sbjct: 131 DGVRCWIL--TEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGDASEIDAFLLKLKY 190
Query: 184 APRIYKKVAPSSGQVFDDPHLNFFKEVPDDQWVRTDDFTPSCSIGQSSSLCLKLPNGRQL 243
P+++K+V F F KE D W+RT DF+ S SIG S+ CL++ NG +
Sbjct: 191 GPKVFKRVTVHIATKFKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTSTCFCLEVHNGSTM 250
Query: 244 PNFRQNFAYYEEFENEFELVDGGDGFSCSKDLVPMVDSR-PNVFLPYEIIFKVNVLVQNG 303
+ YY E VD G F+ + +VP++++ + PYEI+F++N LV
Sbjct: 251 LDIFSGLPYYREDTLSLTYVD-GKTFASAAQIVPLLNAAILGLEFPYEILFQLNALVHAQ 310
Query: 304 CIPGPLLDTGFYRLVDPSR-IRIEFVEHALEKLFHLKECSYEPSSFLTEQYRKYSRHPPN 363
I L L+ R + +E L+KL Y+P F+ Q + + +
Sbjct: 311 KI--SLFAASDMELIKILRGMSLETALVILKKLHQQSSICYDPVFFVKTQMQSVVKKMKH 370
Query: 364 SPAIS----LDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRQFPQDIDNFLRVTFVDEE 423
SPA + + ++ +R +TP K+Y GPE+ +N V++ F + + +F+RVTFV+E+
Sbjct: 371 SPASAYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSDFMRVTFVEED 430
Query: 424 WDKM--RSIDLLPRMSSTIKDGKTDIYSRILSVLRNGIVIGAKNFEFLAFSSSQLRDNSL 483
W K+ ++ + + +K +T+IY+R+LS+L GI +G K FEFLAFS+SQLR NS+
Sbjct: 431 WSKLPANALSVNSKEGYFVKPSRTNIYNRVLSILGEGITVGPKRFEFLAFSASQLRGNSV 490
Query: 484 WMFASRPGLDAAAIREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEV 543
WMFAS + A IREWMG FR I++ +K AAR+GQ F +S +TL V + E IPDIEV
Sbjct: 491 WMFASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQDVEQIPDIEV 550
Query: 544 QHGEVKYVFSDGIGKISSDFAKRVAAKCSLQAFTPSAFQIRYGGYKGVVAVDPLSSIKLS 603
Y FSDGIGKIS FAK+VA KC L + PSAFQIRYGGYKGV+AVD S KLS
Sbjct: 551 TTDGADYCFSDGIGKISLAFAKQVAQKCGL-SHVPSAFQIRYGGYKGVIAVDRSSFRKLS 610
Query: 604 LRNSMCKFESDNTKLDVLGYSKYQPCFLNRQVITLLSTLGVKDEVFEKKQREAVEQLDAI 663
LR+SM KF+S+N L+V +++ PCFLNR++I LLSTLG++D +FE Q + L +
Sbjct: 611 LRDSMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQAVHLSMLGNM 670
Query: 664 LTDPLRAQEALELMSPGENTNILKEMLKCGYKPDIEPYLSMMLQTFRASKLLELRTKSRI 723
L D A L+ +S + N+L +ML GY P EPYLSMML+ S+L EL+++ RI
Sbjct: 671 LEDRDAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQLSELKSRCRI 730
Query: 724 FIPDGRAVMGCLDETGTLEYGQVFVQISSARHRNLSDTFAFNMRGSERCLVIEGNVIVAK 783
+P GR ++GC+DE G LEYGQV+V+++ + S ++ + E V+ G V+V K
Sbjct: 731 LVPKGRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEETSVVIGKVVVTK 790
Query: 784 NPCLHPGDVRVLRAVNIPRLYH--MVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTE 843
NPCLHPGD+RVL A+ +DC++FPQKG RPHPNECSG DLDGD +FV WD +
Sbjct: 791 NPCLHPGDIRVLDAIYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDGDQFFVSWDEK 850
Query: 844 LIPPRQVLPMDYTPAPPIQLDRDVRIEDVQEYFVNYMVNDSLGIIANAHTAFADKESFKA 903
+IP PMDY + P +D DV +E++ ++FV+YM++D+LG+I+ AH AD++ KA
Sbjct: 851 IIPSEMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHLVHADRDPEKA 910
Query: 904 RSSPCLELAKLFSIAVDFPKTGVPAIIPSHLNVKEFPDFMEKPDRPSYESKNVIGKLFRA 963
RS CLELA L S AVDF KTG PA +P L +EFPDF+E+ ++P+Y S++V GKL+RA
Sbjct: 911 RSQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISESVFGKLYRA 970
Query: 964 VKDIAPTVSYIRSFTRDVAMQCYDFDMEVEGFEDYVEDAFYHKNNYDYKLGNLLDYYGIK 1023
VK +++ + YD +E GFE ++E A H++ Y KL +L+ YYG
Sbjct: 971 VKS---SLAQRKPEAESEDTVAYDVTLEEAGFESFIETAKAHRDMYGEKLTSLMIYYGAA 1030
Query: 1024 SEAEILSGSI----MRMSKSFTRRRD-AEAINLAVRSLRKEARTWFNAKESGPDSGSDDL 1083
+E EIL+G + M +++ R D + I L+V+ L KEA WF S D+
Sbjct: 1031 NEEEILTGILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFE------KSCEDEQ 1090
Query: 1084 FAK--ASAWYHVTYHHSYWGCYNEGTKRDHYLSFPWCVYDKLMQIKENNLRRR 1112
K ASAWY+VTY+ N ++ +LSFPW V D L+ IK N +R+
Sbjct: 1091 QKKKLASAWYYVTYNP------NHRDEKLTFLSFPWIVGDVLLDIKAENAQRQ 1121
BLAST of Tan0001219 vs. ExPASy Swiss-Prot
Match:
Q7XM31 (Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR2 PE=2 SV=1)
HSP 1 Score: 748.8 bits (1932), Expect = 8.9e-215
Identity = 443/1131 (39.17%), Postives = 650/1131 (57.47%), Query Frame = 0
Query: 11 PSHVTADAVKIFLEGHTGVGTVYAIKVRPPKRGG-TRVYAIVQFTGAAQAESIISLAN-- 70
PS V A+ + F G +A ++ RG +R + VQF AA A + LA+
Sbjct: 19 PSAVAAELLAFFDSAVAVAGGAFACEIAAAHRGWLSRGHGTVQFGSAAAAAAAAGLASSG 78
Query: 71 RRLWYGSSYLKARVADVDIVPKPRTYVHTLENLTLCFGCQVSGERFHV--LWEG-GVDLV 130
R + + L + VD++P+ L G +V+ F W+G +++
Sbjct: 79 RLPRFLGALLSVSPSPVDLLPRASDLSLRAAGAGLVVGDRVAERVFEAADAWDGVRAEVI 138
Query: 131 TFGIGMRKMNFCLIHNFVEYRLELSYENIWQIQLHHPQHQSMKYLLIQLYGAPRIYKKVA 190
G R+++ L H+ Y+LE+ +E++ M +L+QL APRI+ ++
Sbjct: 139 P---GKRRVDLYLEHDSQRYKLEVLFEDMKDCL--GCTLDGMGAILLQLNYAPRIHTAIS 198
Query: 191 -PSSGQVFDDPHLNFFKEVPDDQWVRTDDFTPSCSIGQSSSLCLKLPNGRQLPNFRQNFA 250
P+ F D + KE WVR DFTP+ S G+ S+L LKL + + ++
Sbjct: 199 GPAVNSRFMDDRFHACKEDAKFSWVRALDFTPNYSFGRCSTLVLKLGKSALVSDILKSLP 258
Query: 251 YYEEFENEFEL-VDGGDGFSCSKDLVPMVDSRPNVFLPYEIIFKVNVLVQNGCIPGPLLD 310
+ N EL ++ DG S ++VP+V + +PYE++F++N L+ G I ++
Sbjct: 259 F---SGNLGELTMNSMDGVGASSNVVPLVHCPRDYSVPYEVLFRLNSLMHMGKIVAKHVN 318
Query: 311 TGFYRLVDPSRIRIEFVEHALEKLFHLKECSYEPSSFLTEQYRKYSRHPPNSPAISLDA- 370
++ + + ++ EK+ L+ Y P F+ Q YS ++ +S +
Sbjct: 319 ADLFKAL--QELPVDVSRRIFEKMHKLESTCYGPLQFI--QQEAYSMKRSHNVLLSNEGE 378
Query: 371 -----GLVYVRRVQITPCKVYFCGPEVNVSNRVLRQFPQDIDNFLRVTFVDEEWDKMRSI 430
L+ RV ITP K++ GPE V+N V++ +F+RVTFVDE+W K+ S
Sbjct: 379 GEGERKLMKCYRVNITPSKIFCFGPEEEVTNYVVKHHSAYASDFVRVTFVDEDWSKLSSN 438
Query: 431 DLLPRMSSTI--KDGKTDIYSRILSVLRNGIVIGAKNFEFLAFSSSQLRDNSLWMFASRP 490
+ R+ K KT +Y RILS+L+ G IG KNFEFLAFS+SQLR NS+WMFAS
Sbjct: 439 AISARIEQGFFSKPFKTGLYYRILSILKKGFSIGPKNFEFLAFSASQLRGNSVWMFASNA 498
Query: 491 GLDAAAIREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKY 550
L+A IR WMG F +I++ +K AAR+GQ F SS +T V R + E+IPDIE+ KY
Sbjct: 499 SLNAGGIRRWMGHFENIRSVSKCAARMGQLFSSSRQTFEVLRWDVEVIPDIEITTDGSKY 558
Query: 551 VFSDGIGKISSDFAKRVAAKCSLQAFT-PSAFQIRYGGYKGVVAVDPLSSIKLSLRNSMC 610
+FSDGIGKIS FAKRVA L PSAFQIRYGGYKGV+A+DP+SSI LSLR SM
Sbjct: 559 IFSDGIGKISLRFAKRVAHHVGLDPTNLPSAFQIRYGGYKGVIAIDPMSSIDLSLRPSMK 618
Query: 611 KFESDNTKLDVLGYSKYQPCFLNRQVITLLSTLGVKDEVFEKKQREAVEQLDAILTDPLR 670
KFES++ L++ +SK QPC++NR++I+LLSTLG++DE+F Q++ + + + +LT+
Sbjct: 619 KFESESRMLNITSWSKSQPCYVNREIISLLSTLGIRDEIFVAMQQDEMRETEEMLTNKEV 678
Query: 671 AQEALELMSPGENTNILKEMLKCGYKPDIEPYLSMMLQTFRASKLLELRTKSRIFIPDGR 730
A L + G T +ML GY+P EPYLSM+L+ + ++L ++RT+ +I +P GR
Sbjct: 679 ALSVLGKLG-GSETKTAVKMLLQGYEPSSEPYLSMILKAHQENRLTDIRTRCKIHVPKGR 738
Query: 731 AVMGCLDETGTLEYGQVFVQI--SSARHRNLSDTFAFNMRGSERCLVIEGNVIVAKNPCL 790
++GCLDETG LEYGQV+++I +S ++ + ++ +N G +V G V + KNPCL
Sbjct: 739 VLIGCLDETGVLEYGQVYIRITKNSKEQKDSNQSYFYNDDGKTATVV--GKVAITKNPCL 798
Query: 791 HPGDVRVLRAVNIPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQ 850
HPGD+RVL A+ P L MVDC+VFPQ+G RPHPNECSG DLDGD+YF+ WD +LIP +
Sbjct: 799 HPGDIRVLEAIYDPDLVGMVDCLVFPQRGERPHPNECSGGDLDGDLYFITWDDKLIPEKV 858
Query: 851 VLPMDYTPAPPIQLDRDVRIEDVQEYFVNYMVNDSLGIIANAHTAFADKESFKARSSPCL 910
PMDYT P +D V +E++Q++FV+YM+NDSLG I+ AH AD+ KARS CL
Sbjct: 859 DTPMDYTATRPRIMDHVVTLEEIQKHFVDYMINDSLGAISTAHLIHADRSPLKARSPECL 918
Query: 911 ELAKLFSIAVDFPKTGVPAIIPSHLNVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAP 970
+LA L S+AVDF KTG PA +P L +E+PDFME+ ++P Y S V+GKL+R+
Sbjct: 919 QLATLHSMAVDFAKTGAPAEMPRTLRPREYPDFMERWEKPMYISNGVLGKLYRSAMGHME 978
Query: 971 TVSYIRSFTRDVAM--QCYDFDMEVEGFEDYVEDAFYHKNNYDYKLGNLLDYYGIKSEAE 1030
+ + A YD D+EV G +++++ A + Y+ KL L++YY + E E
Sbjct: 979 KSGDSGALSSSSAQPSPTYDPDLEVPGSDEFLQAAEEYYELYEEKLTTLMNYYRAELEDE 1038
Query: 1031 ILSGSIMRMSKSFTRRRD-------AEAINLAVRSLRKEARTWFNAKESGPDSGSDDLFA 1090
IL+G+I +K +RD + I AV +L +EAR W + +D
Sbjct: 1039 ILTGNI--RNKMLYLKRDNKRYFEMKDRIVAAVDALHREARGWLLSSRK-----EEDASR 1098
Query: 1091 KASAWYHVTYHHSYWGCYNEGTKRDHYLSFPWCVYDKLMQIKENNLRRRER 1114
ASAWY VTYH + + + SFPW D L+ IK ++ RR R
Sbjct: 1099 MASAWYRVTYH-------PDRRRGKRFWSFPWIACDNLLAIKASSQLRRRR 1120
BLAST of Tan0001219 vs. ExPASy Swiss-Prot
Match:
Q9SG02 (RNA-dependent RNA polymerase 6 OS=Arabidopsis thaliana OX=3702 GN=RDR6 PE=1 SV=1)
HSP 1 Score: 589.0 bits (1517), Expect = 1.2e-166
Identity = 401/1102 (36.39%), Postives = 574/1102 (52.09%), Query Frame = 0
Query: 92 TYVHTLENLTLCFGCQVSGERFHVLWEG-GVDLV------TFGIGMRK-----MNFCLIH 151
T + L +TL G VS + F V W GVD + T RK ++H
Sbjct: 127 TVPYKLAGITLEIGTLVSRDDFFVSWRAEGVDFLVDPFDNTCKFCFRKSTAFSFKDAVMH 186
Query: 152 NFV--EYRLELSYENIWQIQLHHPQHQSMKYLLIQLYGAPRIYKKVAPSS------GQVF 211
+ +Y+LEL +I ++ + H + L++QL +PR++ + A G +
Sbjct: 187 AVINCDYKLELLVRDIQTVRQYKTLHGFV--LILQLASSPRVWYRTADDDIYDTVPGDLL 246
Query: 212 DDPHLNFFKEVPDDQWVRTDDFTPSCSIGQSSSLCLKL---------------------- 271
DD DD W+RT DFT +IG+ S + +
Sbjct: 247 DD----------DDPWIRTTDFTQVGAIGRCHSYRVLISPRYENKLRTALDYFRMRRVQE 306
Query: 272 PNGRQLPNFRQNFAYYEEFENEFELVDGGDGFSCSKDLVPMVDSRPNVFLPYEIIFKVNV 331
R P R + E + F + +G S +EI+F VN
Sbjct: 307 ERVRWPPRIRNEPCFGEPVSDHFFCIHHKEGIS------------------FEIMFLVNS 366
Query: 332 LVQNGCIPGPLLDTGFYRLV--DPSRIRIEFVEHALEKLFHLKECSYEPSSFLTEQYRK- 391
++ G L F+ L+ P + I ++H C+Y+ F + Y++
Sbjct: 367 VLHRGVFNQFQLTERFFDLLRNQPKDVNIASLKHL---------CTYKRPVF--DAYKRL 426
Query: 392 ------YSRHPPNSPAISLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRQFPQDIDNF 451
++P + + +RR+ ITP + Y PEV +SNRVLR++ + F
Sbjct: 427 KLVQEWIQKNPKLLGSHEQSEDISEIRRLVITPTRAYCLPPEVELSNRVLRRYKAVAERF 486
Query: 452 LRVTFVDEEWDKMRSIDLLPRMSSTIKD-------GKTDIYSRILSVLRNGIVIGAKNFE 511
LRVTF+DE + S L ++ +KD KT ++ R+ S+L +G + + +
Sbjct: 487 LRVTFMDESMQTINSNVLSYFVAPIVKDLTSSSFSQKTYVFKRVKSILTDGFKLCGRKYS 546
Query: 512 FLAFSSSQLRDNSLWMFASRPGLDAAAIREWMGDFRHIKNPAKYAARLGQSFGSSTETLS 571
FLAFS++QLRD S W FA + I+ WMG F+ KN AK AAR+G F S+ T+
Sbjct: 547 FLAFSANQLRDRSAWFFAEDGKTRVSDIKTWMGKFKD-KNVAKCAARMGLCFSSTYATVD 606
Query: 572 VARHEREI-IPDIEVQHGEVKYVFSDGIGKISSDFAKRVAAKCSLQA-FTPSAFQIRYGG 631
V HE + +PDIE ++G YVFSDGIG I+ D A V K L ++P A+QIRY G
Sbjct: 607 VMPHEVDTEVPDIE-RNG---YVFSDGIGTITPDLADEVMEKLKLDVHYSPCAYQIRYAG 666
Query: 632 YKGVVAVDPLSS--IKLSLRNSMCKFESDNTKLDVLGYSKYQPCFLNRQVITLLSTLGVK 691
+KGVVA P S I+L+LR+SM KF S +T L++ ++++QP FLNRQ+ITLLS LGV
Sbjct: 667 FKGVVARWPSKSDGIRLALRDSMKKFFSKHTILEICSWTRFQPGFLNRQIITLLSVLGVP 726
Query: 692 DEVFEKKQREAVEQLDAILTDPLRAQEALELMSPGENTNILKEMLKCGYKPDIEPYLSMM 751
DE+F Q + +L+ IL D A E L S E N ML G+KP EP+L M
Sbjct: 727 DEIFWDMQESMLYKLNRILDDTDVAFEVL-TASCAEQGNTAAIMLSAGFKPKTEPHLRGM 786
Query: 752 LQTFRASKLLELRTKSRIFIPDGRAVMGCLDETGTLEYGQVFVQISSARHRNLSDTFAFN 811
L + R ++L LR KSRIF+ GR +MGCLDE G LE+GQ F+Q+S N
Sbjct: 787 LSSVRIAQLWGLREKSRIFVTSGRWLMGCLDEAGILEHGQCFIQVSKPSIENCFSKHGSR 846
Query: 812 MRGSERCL-VIEGNVIVAKNPCLHPGDVRVLRAVNIPRLYHMVDCVVFPQKGSRPHPNEC 871
+ ++ L V++G V +AKNPCLHPGDVR+L AV++P+L+HM DC++FPQKG RPH NE
Sbjct: 847 FKETKTDLEVVKGYVAIAKNPCLHPGDVRILEAVDVPQLHHMYDCLIFPQKGDRPHTNEA 906
Query: 872 SGSDLDGDIYFVCWDTELIPP-RQVLP-MDYTPAPPIQLDRDVRIEDVQEYFVNYMVNDS 931
SGSDLDGD+YFV WD +LIPP R+ P M Y A L R V +D+ ++F + N+
Sbjct: 907 SGSDLDGDLYFVAWDQKLIPPNRKSYPAMHYDAAEEKSLGRAVNHQDIIDFFARNLANEQ 966
Query: 932 LGIIANAHTAFADKESFKARSSPCLELAKLFSIAVDFPKTGVPAIIPSHLNVKEFPDFME 991
LG I NAH AD+ + A CL LA+L + AVDFPKTG +P HL K +PDFM
Sbjct: 967 LGTICNAHVVHADRSEYGAMDEECLLLAELAATAVDFPKTGKIVSMPFHLKPKLYPDFMG 1026
Query: 992 KPDRPSYESKNVIGKLFRAVKDIAPTVSYIRS-FTRDVAMQCYDFDMEVEGFEDYVEDAF 1051
K D +Y+S ++G+L+R VK++ + S + D + YD +E+ GFED + +A+
Sbjct: 1027 KEDYQTYKSNKILGRLYRRVKEVYDEDAEASSEESTDPSAIPYDAVLEIPGFEDLIPEAW 1086
Query: 1052 YHKNNYDYKLGNLLDYYGIKSEAEILSGSIMRMSKSFTRRRD--AEAINLAVRSLRKEAR 1111
HK YD +L LL Y ++ E EI++G I M K ++++ E + + SL+KE R
Sbjct: 1087 GHKCLYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYTSKKQGELKERLKHSYNSLKKEFR 1146
Query: 1112 TWFNAKESGPDSGSDD-----LFAKASAWYHVTYHHSYWGCYNEGTKRDH-----YLSFP 1116
F ++ S++ KASAWYHVTYH + E D LSF
Sbjct: 1147 KVFEETIPDHENLSEEEKNILYEKKASAWYHVTYHPEWVKKSLELQDPDESSHAAMLSFA 1178
BLAST of Tan0001219 vs. NCBI nr
Match:
KAG6599933.1 (RNA-dependent RNA polymerase 1, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 2072.7 bits (5369), Expect = 0.0e+00
Identity = 1004/1132 (88.69%), Postives = 1066/1132 (94.17%), Query Frame = 0
Query: 1 MGRTVHINGFPSHVTADAVKIFLEGHTGVGTVYAIKVRPPKRGGTRVYAIVQFTGAAQAE 60
MG+TVHI+GFPSH TAD+VK FLE TG+G+VYAIKVRPPK GG+RVYAIVQF GAAQAE
Sbjct: 988 MGKTVHISGFPSHATADSVKSFLELRTGLGSVYAIKVRPPKGGGSRVYAIVQFIGAAQAE 1047
Query: 61 SIISLANRRLWYGSSYLKARVADVDIVPKPRTYVHTLENLTLCFGCQVSGERFHVLWEGG 120
IISLAN+RLWYGSSYLKAR ADVDIVPKPRTYVHTLE+LTLCFGCQ+S E+FHVLWEG
Sbjct: 1048 LIISLANQRLWYGSSYLKARAADVDIVPKPRTYVHTLEDLTLCFGCQISSEKFHVLWEGD 1107
Query: 121 VDLVTFGIGMRKMNFCLIHNFVEYRLELSYENIWQIQLHHPQHQSMKYLLIQLYGAPRIY 180
V+LVTFG+ MRKMNF LIHNFVEYR +LSYENIWQIQLH QHQSMK LLIQLYGAPRIY
Sbjct: 1108 VELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAPRIY 1167
Query: 181 KKVAPSSGQVFDDPHLNFFKEVPDDQWVRTDDFTPSCSIGQSSSLCLKLPNGRQLPNFRQ 240
KKVAPSSGQ+FDDP NFFKEVPDDQWVRT DFTPS SIGQSSSLCLKLPNGRQLPNFR+
Sbjct: 1168 KKVAPSSGQIFDDPLFNFFKEVPDDQWVRTADFTPSNSIGQSSSLCLKLPNGRQLPNFRR 1227
Query: 241 NFAYYEEFENEFELVDGGDGFSCSKDLVPMVDSRPNVFLPYEIIFKVNVLVQNGCIPGPL 300
+FAYYEEFE+EF+LVDGG+GFSCS DLVP+VDSRPNV LPYEIIFKVNVLVQNGCIPGP
Sbjct: 1228 HFAYYEEFEDEFKLVDGGNGFSCSDDLVPVVDSRPNVLLPYEIIFKVNVLVQNGCIPGPS 1287
Query: 301 LDTGFYRLVDPSRIRIEFVEHALEKLFHLKECSYEPSSFLTEQYRKYSRHPPNSPAISLD 360
LDTGFYRLVDPSR+R+E+VE+ALEKLFHLKEC YEPSSFLTEQY+KY++HP NSPAI+LD
Sbjct: 1288 LDTGFYRLVDPSRMRVEYVENALEKLFHLKECCYEPSSFLTEQYKKYAKHPSNSPAIALD 1347
Query: 361 AGLVYVRRVQITPCKVYFCGPEVNVSNRVLRQFPQDIDNFLRVTFVDEEWDKMRSIDLLP 420
AGLVYVRRVQITPCKVYFCGPEVNVSNRVLR F +D+DNFLRV+FVDEEWDKMRS DLLP
Sbjct: 1348 AGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRSTDLLP 1407
Query: 421 RMSSTIKDGKTDIYSRILSVLRNGIVIGAKNFEFLAFSSSQLRDNSLWMFASRPGLDAAA 480
RM+S+I++GKTDIY RILSVL+NGI IG K F+FLAFSSSQLR+NSLWMFASRPGLDAA
Sbjct: 1408 RMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPGLDAAV 1467
Query: 481 IREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDGI 540
IREWMGDF+HIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDGI
Sbjct: 1468 IREWMGDFQHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDGI 1527
Query: 541 GKISSDFAKRVAAKCSLQAFTPSAFQIRYGGYKGVVAVDPLSSIKLSLRNSMCKFESDNT 600
GKISSDFAKRVA+KC L AFTPSAFQIRYGGYKGVVAVDP SS+KLSLR SMCKFESDNT
Sbjct: 1528 GKISSDFAKRVASKCVL-AFTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKFESDNT 1587
Query: 601 KLDVLGYSKYQPCFLNRQVITLLSTLGVKDEVFEKKQREAVEQLDAILTDPLRAQEALEL 660
KLDVLGYSKYQPCFLNRQ+ITLLSTLGVKDEVFEKKQ EA+EQLDAILTDPL+AQEALEL
Sbjct: 1588 KLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQEALEL 1647
Query: 661 MSPGENTNILKEMLKCGYKPDIEPYLSMMLQTFRASKLLELRTKSRIFIPDGRAVMGCLD 720
MSPGENTNILKEMLKCGYKPD+EPYLSMMLQTFR SKLLELRTKSRIFIP+GRA+MGCLD
Sbjct: 1648 MSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAMMGCLD 1707
Query: 721 ETGTLEYGQVFVQISSARHRNLSDTFAFNMRGSERCLVIEGNVIVAKNPCLHPGDVRVLR 780
ETGTLEYGQVFVQISSARHR++SDT AF+M GSE LVI GNV VAKNPCLHPGDVRVL
Sbjct: 1708 ETGTLEYGQVFVQISSARHRHISDTSAFDMSGSEDHLVIVGNVTVAKNPCLHPGDVRVLN 1767
Query: 781 AVNIPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQVLPMDYTPA 840
AVN+P LYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQ+ PMDYTPA
Sbjct: 1768 AVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTPA 1827
Query: 841 PPIQLDRDVRIEDVQEYFVNYMVNDSLGIIANAHTAFADKESFKARSSPCLELAKLFSIA 900
PPIQLDRDV IEDVQEYFVNYMVNDSLGIIANAHTAFADKE FKARS+PC+ELAKLFSIA
Sbjct: 1828 PPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELAKLFSIA 1887
Query: 901 VDFPKTGVPAIIPSHLNVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPTVSYIRSFT 960
VDFPKTGVPAIIPSHLNVKEFPDFMEKPDRPSYESKNVIGKLFRAVK IAP +SYIRSFT
Sbjct: 1888 VDFPKTGVPAIIPSHLNVKEFPDFMEKPDRPSYESKNVIGKLFRAVKGIAPNISYIRSFT 1947
Query: 961 RDVAMQCYDFDMEVEGFEDYVEDAFYHKNNYDYKLGNLLDYYGIKSEAEILSGSIMRMSK 1020
RDVAM+CYD DME EGFEDYVEDA YHK YDYKLGNLLDYYGIKSE+EI SG+IMRMSK
Sbjct: 1948 RDVAMRCYDSDMETEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGNIMRMSK 2007
Query: 1021 SFTRRRDAEAINLAVRSLRKEARTWFNAKESGPDSGSDDLFAKASAWYHVTYHHSYWGCY 1080
SFTRRRDAEAINLA RSLRKEARTWFN KESGPDSGSDDLFAKASAWYHVTYHHSYWG Y
Sbjct: 2008 SFTRRRDAEAINLAARSLRKEARTWFNTKESGPDSGSDDLFAKASAWYHVTYHHSYWGSY 2067
Query: 1081 NEGTKRDHYLSFPWCVYDKLMQIKENNLRRRERASRMATLDRFGSVLNLGGR 1133
N+G KRDHYLSFPWCVY KLMQ+KENNLRRRE+ASR+ATLDRF VLNL GR
Sbjct: 2068 NDGMKRDHYLSFPWCVYHKLMQVKENNLRRREKASRLATLDRFSRVLNLDGR 2118
BLAST of Tan0001219 vs. NCBI nr
Match:
XP_022943173.1 (RNA-dependent RNA polymerase 1-like isoform X2 [Cucurbita moschata] >XP_022943174.1 RNA-dependent RNA polymerase 1-like isoform X2 [Cucurbita moschata] >XP_022943175.1 RNA-dependent RNA polymerase 1-like isoform X2 [Cucurbita moschata])
HSP 1 Score: 2070.4 bits (5363), Expect = 0.0e+00
Identity = 1004/1132 (88.69%), Postives = 1063/1132 (93.90%), Query Frame = 0
Query: 1 MGRTVHINGFPSHVTADAVKIFLEGHTGVGTVYAIKVRPPKRGGTRVYAIVQFTGAAQAE 60
MG+TVHI+GFPSH TAD+VK FLE TG+GTVYAIKVRPPKRGG+RVYAIVQF GAAQAE
Sbjct: 1 MGKTVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPKRGGSRVYAIVQFIGAAQAE 60
Query: 61 SIISLANRRLWYGSSYLKARVADVDIVPKPRTYVHTLENLTLCFGCQVSGERFHVLWEGG 120
IISLAN+RLWYGSSYLKAR ADVDIVPKPRTYVHTLE+LTLCFGCQVS E+FHVLWEG
Sbjct: 61 LIISLANQRLWYGSSYLKARAADVDIVPKPRTYVHTLEDLTLCFGCQVSSEKFHVLWEGD 120
Query: 121 VDLVTFGIGMRKMNFCLIHNFVEYRLELSYENIWQIQLHHPQHQSMKYLLIQLYGAPRIY 180
V+LVTFG+ MRKMNF LIHNFVEYR +LSYENIWQIQLH QHQSMK LLIQLYGAPRIY
Sbjct: 121 VELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAPRIY 180
Query: 181 KKVAPSSGQVFDDPHLNFFKEVPDDQWVRTDDFTPSCSIGQSSSLCLKLPNGRQLPNFRQ 240
KKVAPSSGQ+FDDP NFFKEVPDDQWVRT DFTPS S+GQSSSLCLKLPNGRQLPNFR+
Sbjct: 181 KKVAPSSGQIFDDPLFNFFKEVPDDQWVRTADFTPSNSVGQSSSLCLKLPNGRQLPNFRR 240
Query: 241 NFAYYEEFENEFELVDGGDGFSCSKDLVPMVDSRPNVFLPYEIIFKVNVLVQNGCIPGPL 300
+FAYYEEFE+EF+LVDGG+ FSCS DLVP+VDSRPNV LPYEIIFKVNVLVQNGCI GP
Sbjct: 241 HFAYYEEFEDEFKLVDGGNSFSCSDDLVPVVDSRPNVLLPYEIIFKVNVLVQNGCIAGPS 300
Query: 301 LDTGFYRLVDPSRIRIEFVEHALEKLFHLKECSYEPSSFLTEQYRKYSRHPPNSPAISLD 360
LDTGFYRLVDPSRIR+E+VE+ALEKLFHLKEC YEPSSFLTEQY+KY++HP NSPAI+LD
Sbjct: 301 LDTGFYRLVDPSRIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKYAKHPSNSPAIALD 360
Query: 361 AGLVYVRRVQITPCKVYFCGPEVNVSNRVLRQFPQDIDNFLRVTFVDEEWDKMRSIDLLP 420
GLVYVRRVQITPCKVYFCGPEVNVSNRVLR F +D+DNFLRV+FVDEEWDKMRS DLLP
Sbjct: 361 DGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRSTDLLP 420
Query: 421 RMSSTIKDGKTDIYSRILSVLRNGIVIGAKNFEFLAFSSSQLRDNSLWMFASRPGLDAAA 480
RM+S+I++GKTDIY RILSVL+NGI IG K F+FLAFSSSQLR+NSLWMFASRPGLDAA
Sbjct: 421 RMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPGLDAAV 480
Query: 481 IREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDGI 540
IREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDGI
Sbjct: 481 IREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDGI 540
Query: 541 GKISSDFAKRVAAKCSLQAFTPSAFQIRYGGYKGVVAVDPLSSIKLSLRNSMCKFESDNT 600
GKISSDFAKRVA+KC L AFTPSAFQIRYGGYKGVVAVDP SS+KLSLR SMCKFESDNT
Sbjct: 541 GKISSDFAKRVASKCVL-AFTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKFESDNT 600
Query: 601 KLDVLGYSKYQPCFLNRQVITLLSTLGVKDEVFEKKQREAVEQLDAILTDPLRAQEALEL 660
KLDVLGYSKYQPCFLNRQ+ITLLSTLGVKDEVFEKKQ EA+EQLDAILTDPL+AQEALEL
Sbjct: 601 KLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQEALEL 660
Query: 661 MSPGENTNILKEMLKCGYKPDIEPYLSMMLQTFRASKLLELRTKSRIFIPDGRAVMGCLD 720
MSPGENTNILKEMLKCGYKPD+EPYLSMMLQTFR SKLLELRTKSRIFIP+GRA+MGCLD
Sbjct: 661 MSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAMMGCLD 720
Query: 721 ETGTLEYGQVFVQISSARHRNLSDTFAFNMRGSERCLVIEGNVIVAKNPCLHPGDVRVLR 780
ETGTLEYGQVFVQISS RHR++SDT AF+M GSE LVI GNV VAKNPCLHPGDVRVL
Sbjct: 721 ETGTLEYGQVFVQISSVRHRHISDTSAFDMSGSEDHLVIVGNVTVAKNPCLHPGDVRVLN 780
Query: 781 AVNIPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQVLPMDYTPA 840
AVN+P LYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQ+ PMDYTPA
Sbjct: 781 AVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTPA 840
Query: 841 PPIQLDRDVRIEDVQEYFVNYMVNDSLGIIANAHTAFADKESFKARSSPCLELAKLFSIA 900
PPIQLDRDV IEDVQEYFVNYMVNDSLGIIANAHTAFADKE FKARS+PC+ELAKLFSIA
Sbjct: 841 PPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELAKLFSIA 900
Query: 901 VDFPKTGVPAIIPSHLNVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPTVSYIRSFT 960
VDFPKTGVPAIIPSHLNVKEFPDFMEKPDRPSYESKNVIGKLFRAVK IAP +SYIRSFT
Sbjct: 901 VDFPKTGVPAIIPSHLNVKEFPDFMEKPDRPSYESKNVIGKLFRAVKGIAPNISYIRSFT 960
Query: 961 RDVAMQCYDFDMEVEGFEDYVEDAFYHKNNYDYKLGNLLDYYGIKSEAEILSGSIMRMSK 1020
RDVAM+CYD DME EGFEDYVEDA YHK YDYKLGNLLDYYGIKSE+EI SG+IMRMSK
Sbjct: 961 RDVAMRCYDSDMETEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGNIMRMSK 1020
Query: 1021 SFTRRRDAEAINLAVRSLRKEARTWFNAKESGPDSGSDDLFAKASAWYHVTYHHSYWGCY 1080
SFTRRRDAEAINLA RSLRKEARTWFN KESGPDSGSDDLFAKASAWYHVTYHHSYWG Y
Sbjct: 1021 SFTRRRDAEAINLAARSLRKEARTWFNTKESGPDSGSDDLFAKASAWYHVTYHHSYWGSY 1080
Query: 1081 NEGTKRDHYLSFPWCVYDKLMQIKENNLRRRERASRMATLDRFGSVLNLGGR 1133
N+G KRDHYLSFPWCVY KLMQ+KENNLRRRE+ASR+ATLDRF VLNL GR
Sbjct: 1081 NDGMKRDHYLSFPWCVYHKLMQVKENNLRRREKASRLATLDRFSRVLNLDGR 1131
BLAST of Tan0001219 vs. NCBI nr
Match:
XP_022943172.1 (RNA-dependent RNA polymerase 1-like isoform X1 [Cucurbita moschata])
HSP 1 Score: 2070.4 bits (5363), Expect = 0.0e+00
Identity = 1004/1132 (88.69%), Postives = 1063/1132 (93.90%), Query Frame = 0
Query: 1 MGRTVHINGFPSHVTADAVKIFLEGHTGVGTVYAIKVRPPKRGGTRVYAIVQFTGAAQAE 60
MG+TVHI+GFPSH TAD+VK FLE TG+GTVYAIKVRPPKRGG+RVYAIVQF GAAQAE
Sbjct: 15 MGKTVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPKRGGSRVYAIVQFIGAAQAE 74
Query: 61 SIISLANRRLWYGSSYLKARVADVDIVPKPRTYVHTLENLTLCFGCQVSGERFHVLWEGG 120
IISLAN+RLWYGSSYLKAR ADVDIVPKPRTYVHTLE+LTLCFGCQVS E+FHVLWEG
Sbjct: 75 LIISLANQRLWYGSSYLKARAADVDIVPKPRTYVHTLEDLTLCFGCQVSSEKFHVLWEGD 134
Query: 121 VDLVTFGIGMRKMNFCLIHNFVEYRLELSYENIWQIQLHHPQHQSMKYLLIQLYGAPRIY 180
V+LVTFG+ MRKMNF LIHNFVEYR +LSYENIWQIQLH QHQSMK LLIQLYGAPRIY
Sbjct: 135 VELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAPRIY 194
Query: 181 KKVAPSSGQVFDDPHLNFFKEVPDDQWVRTDDFTPSCSIGQSSSLCLKLPNGRQLPNFRQ 240
KKVAPSSGQ+FDDP NFFKEVPDDQWVRT DFTPS S+GQSSSLCLKLPNGRQLPNFR+
Sbjct: 195 KKVAPSSGQIFDDPLFNFFKEVPDDQWVRTADFTPSNSVGQSSSLCLKLPNGRQLPNFRR 254
Query: 241 NFAYYEEFENEFELVDGGDGFSCSKDLVPMVDSRPNVFLPYEIIFKVNVLVQNGCIPGPL 300
+FAYYEEFE+EF+LVDGG+ FSCS DLVP+VDSRPNV LPYEIIFKVNVLVQNGCI GP
Sbjct: 255 HFAYYEEFEDEFKLVDGGNSFSCSDDLVPVVDSRPNVLLPYEIIFKVNVLVQNGCIAGPS 314
Query: 301 LDTGFYRLVDPSRIRIEFVEHALEKLFHLKECSYEPSSFLTEQYRKYSRHPPNSPAISLD 360
LDTGFYRLVDPSRIR+E+VE+ALEKLFHLKEC YEPSSFLTEQY+KY++HP NSPAI+LD
Sbjct: 315 LDTGFYRLVDPSRIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKYAKHPSNSPAIALD 374
Query: 361 AGLVYVRRVQITPCKVYFCGPEVNVSNRVLRQFPQDIDNFLRVTFVDEEWDKMRSIDLLP 420
GLVYVRRVQITPCKVYFCGPEVNVSNRVLR F +D+DNFLRV+FVDEEWDKMRS DLLP
Sbjct: 375 DGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRSTDLLP 434
Query: 421 RMSSTIKDGKTDIYSRILSVLRNGIVIGAKNFEFLAFSSSQLRDNSLWMFASRPGLDAAA 480
RM+S+I++GKTDIY RILSVL+NGI IG K F+FLAFSSSQLR+NSLWMFASRPGLDAA
Sbjct: 435 RMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPGLDAAV 494
Query: 481 IREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDGI 540
IREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDGI
Sbjct: 495 IREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDGI 554
Query: 541 GKISSDFAKRVAAKCSLQAFTPSAFQIRYGGYKGVVAVDPLSSIKLSLRNSMCKFESDNT 600
GKISSDFAKRVA+KC L AFTPSAFQIRYGGYKGVVAVDP SS+KLSLR SMCKFESDNT
Sbjct: 555 GKISSDFAKRVASKCVL-AFTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKFESDNT 614
Query: 601 KLDVLGYSKYQPCFLNRQVITLLSTLGVKDEVFEKKQREAVEQLDAILTDPLRAQEALEL 660
KLDVLGYSKYQPCFLNRQ+ITLLSTLGVKDEVFEKKQ EA+EQLDAILTDPL+AQEALEL
Sbjct: 615 KLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQEALEL 674
Query: 661 MSPGENTNILKEMLKCGYKPDIEPYLSMMLQTFRASKLLELRTKSRIFIPDGRAVMGCLD 720
MSPGENTNILKEMLKCGYKPD+EPYLSMMLQTFR SKLLELRTKSRIFIP+GRA+MGCLD
Sbjct: 675 MSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAMMGCLD 734
Query: 721 ETGTLEYGQVFVQISSARHRNLSDTFAFNMRGSERCLVIEGNVIVAKNPCLHPGDVRVLR 780
ETGTLEYGQVFVQISS RHR++SDT AF+M GSE LVI GNV VAKNPCLHPGDVRVL
Sbjct: 735 ETGTLEYGQVFVQISSVRHRHISDTSAFDMSGSEDHLVIVGNVTVAKNPCLHPGDVRVLN 794
Query: 781 AVNIPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQVLPMDYTPA 840
AVN+P LYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQ+ PMDYTPA
Sbjct: 795 AVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTPA 854
Query: 841 PPIQLDRDVRIEDVQEYFVNYMVNDSLGIIANAHTAFADKESFKARSSPCLELAKLFSIA 900
PPIQLDRDV IEDVQEYFVNYMVNDSLGIIANAHTAFADKE FKARS+PC+ELAKLFSIA
Sbjct: 855 PPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELAKLFSIA 914
Query: 901 VDFPKTGVPAIIPSHLNVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPTVSYIRSFT 960
VDFPKTGVPAIIPSHLNVKEFPDFMEKPDRPSYESKNVIGKLFRAVK IAP +SYIRSFT
Sbjct: 915 VDFPKTGVPAIIPSHLNVKEFPDFMEKPDRPSYESKNVIGKLFRAVKGIAPNISYIRSFT 974
Query: 961 RDVAMQCYDFDMEVEGFEDYVEDAFYHKNNYDYKLGNLLDYYGIKSEAEILSGSIMRMSK 1020
RDVAM+CYD DME EGFEDYVEDA YHK YDYKLGNLLDYYGIKSE+EI SG+IMRMSK
Sbjct: 975 RDVAMRCYDSDMETEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGNIMRMSK 1034
Query: 1021 SFTRRRDAEAINLAVRSLRKEARTWFNAKESGPDSGSDDLFAKASAWYHVTYHHSYWGCY 1080
SFTRRRDAEAINLA RSLRKEARTWFN KESGPDSGSDDLFAKASAWYHVTYHHSYWG Y
Sbjct: 1035 SFTRRRDAEAINLAARSLRKEARTWFNTKESGPDSGSDDLFAKASAWYHVTYHHSYWGSY 1094
Query: 1081 NEGTKRDHYLSFPWCVYDKLMQIKENNLRRRERASRMATLDRFGSVLNLGGR 1133
N+G KRDHYLSFPWCVY KLMQ+KENNLRRRE+ASR+ATLDRF VLNL GR
Sbjct: 1095 NDGMKRDHYLSFPWCVYHKLMQVKENNLRRREKASRLATLDRFSRVLNLDGR 1145
BLAST of Tan0001219 vs. NCBI nr
Match:
XP_022994928.1 (probable RNA-dependent RNA polymerase 1 isoform X2 [Cucurbita maxima] >XP_022994935.1 probable RNA-dependent RNA polymerase 1 isoform X2 [Cucurbita maxima] >XP_022994937.1 probable RNA-dependent RNA polymerase 1 isoform X2 [Cucurbita maxima])
HSP 1 Score: 2067.7 bits (5356), Expect = 0.0e+00
Identity = 1005/1132 (88.78%), Postives = 1064/1132 (93.99%), Query Frame = 0
Query: 1 MGRTVHINGFPSHVTADAVKIFLEGHTGVGTVYAIKVRPPKRGGTRVYAIVQFTGAAQAE 60
MG+TVHI+GFPSH TAD+VK FLE TG+GTVYAIKVRPPKRGG+RVYAIVQFTGAAQAE
Sbjct: 1 MGKTVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPKRGGSRVYAIVQFTGAAQAE 60
Query: 61 SIISLANRRLWYGSSYLKARVADVDIVPKPRTYVHTLENLTLCFGCQVSGERFHVLWEGG 120
IISLAN+RLWYGSSYLKAR ADVDIVPKPRTYVHTLENLTLCFGCQVS E+FHVLWEG
Sbjct: 61 LIISLANQRLWYGSSYLKARAADVDIVPKPRTYVHTLENLTLCFGCQVSSEKFHVLWEGD 120
Query: 121 VDLVTFGIGMRKMNFCLIHNFVEYRLELSYENIWQIQLHHPQHQSMKYLLIQLYGAPRIY 180
V+LVTFG+ MRKMNF LIHNFVEYR +LSYENIWQIQLH QHQSMK LLIQLYGAPRIY
Sbjct: 121 VELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAPRIY 180
Query: 181 KKVAPSSGQVFDDPHLNFFKEVPDDQWVRTDDFTPSCSIGQSSSLCLKLPNGRQLPNFRQ 240
KKVAPSSGQ+FDDP NFFKEVPDDQ VRT DFTPS SIGQSSSLCLKLPNGRQLPNFR+
Sbjct: 181 KKVAPSSGQIFDDPLFNFFKEVPDDQCVRTADFTPSYSIGQSSSLCLKLPNGRQLPNFRR 240
Query: 241 NFAYYEEFENEFELVDGGDGFSCSKDLVPMVDSRPNVFLPYEIIFKVNVLVQNGCIPGPL 300
+FAYYEEFE+EF+LVDGG+GFSCS DLVP+VDS PNV LPYEIIFKVNVLVQNGCIPGP
Sbjct: 241 HFAYYEEFEDEFKLVDGGNGFSCSDDLVPVVDSHPNVLLPYEIIFKVNVLVQNGCIPGPS 300
Query: 301 LDTGFYRLVDPSRIRIEFVEHALEKLFHLKECSYEPSSFLTEQYRKYSRHPPNSPAISLD 360
LDTGFYRLVDPSRIR+E+VE+ALEKLFHLKEC YEPSSFLTEQY+KY++HP NSPAI+LD
Sbjct: 301 LDTGFYRLVDPSRIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKYAKHPSNSPAIALD 360
Query: 361 AGLVYVRRVQITPCKVYFCGPEVNVSNRVLRQFPQDIDNFLRVTFVDEEWDKMRSIDLLP 420
AGLVYVRRVQITPCKVYFCGPEVNVSNRVLR F +D+DNFLRV+FVDEEWDKMRS DLLP
Sbjct: 361 AGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRSTDLLP 420
Query: 421 RMSSTIKDGKTDIYSRILSVLRNGIVIGAKNFEFLAFSSSQLRDNSLWMFASRPGLDAAA 480
RM+S+I++GKTDIY RILSVL+NGI IG K F+FLAFSSSQLR+NSLWMFASRPGLDAA
Sbjct: 421 RMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPGLDAAV 480
Query: 481 IREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDGI 540
IREWMGDF+HIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDGI
Sbjct: 481 IREWMGDFQHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDGI 540
Query: 541 GKISSDFAKRVAAKCSLQAFTPSAFQIRYGGYKGVVAVDPLSSIKLSLRNSMCKFESDNT 600
GKISSDFAKRVA+KC L AFTPSAFQIRYGGYKGVVAVDP SS+KLSLR SMCKFESDNT
Sbjct: 541 GKISSDFAKRVASKCVL-AFTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKFESDNT 600
Query: 601 KLDVLGYSKYQPCFLNRQVITLLSTLGVKDEVFEKKQREAVEQLDAILTDPLRAQEALEL 660
KLDVLGYSKYQPCFLNRQ+ITLLSTLGVKDEVFEKKQ EA+EQLDAILTDPL+AQEALEL
Sbjct: 601 KLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQEALEL 660
Query: 661 MSPGENTNILKEMLKCGYKPDIEPYLSMMLQTFRASKLLELRTKSRIFIPDGRAVMGCLD 720
MSPGENTNILKEMLKCGYKPD+EPYLSMMLQTFR SKLLELRTKSRIFIP+GRA+MGCLD
Sbjct: 661 MSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAMMGCLD 720
Query: 721 ETGTLEYGQVFVQISSARHRNLSDTFAFNMRGSERCLVIEGNVIVAKNPCLHPGDVRVLR 780
ETGTLEYGQVFVQIS+ARHR++SDT AF+M GSE LVI GNV VAKNPCLHPGDVRVL
Sbjct: 721 ETGTLEYGQVFVQISNARHRHISDTSAFDMSGSEDHLVIVGNVTVAKNPCLHPGDVRVLN 780
Query: 781 AVNIPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQVLPMDYTPA 840
AVN+P LYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQ+ PMDYTPA
Sbjct: 781 AVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTPA 840
Query: 841 PPIQLDRDVRIEDVQEYFVNYMVNDSLGIIANAHTAFADKESFKARSSPCLELAKLFSIA 900
PPIQLDRDV IEDVQEYFVNYMVNDSLGIIANAHTAFADKE FKARS+PC+ELAKLFSIA
Sbjct: 841 PPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELAKLFSIA 900
Query: 901 VDFPKTGVPAIIPSHLNVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPTVSYIRSFT 960
VDFPKTGVPAIIPSHLNVKEFPDFMEKPDR SYESKNVIGKLFRAVK IAP +SYIRSFT
Sbjct: 901 VDFPKTGVPAIIPSHLNVKEFPDFMEKPDRHSYESKNVIGKLFRAVKGIAPNISYIRSFT 960
Query: 961 RDVAMQCYDFDMEVEGFEDYVEDAFYHKNNYDYKLGNLLDYYGIKSEAEILSGSIMRMSK 1020
RDVAM+CYD DME EGFEDYVEDA YHK YDYKLGNLLDYYGIKSE+EI SG+IMRMSK
Sbjct: 961 RDVAMRCYDSDMEAEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGNIMRMSK 1020
Query: 1021 SFTRRRDAEAINLAVRSLRKEARTWFNAKESGPDSGSDDLFAKASAWYHVTYHHSYWGCY 1080
SFTRRRDAEAINLA RSLRKEARTWFN KESG DSGSDDLFAKASAWYHVTYHHSYWG Y
Sbjct: 1021 SFTRRRDAEAINLAARSLRKEARTWFNTKESGLDSGSDDLFAKASAWYHVTYHHSYWGSY 1080
Query: 1081 NEGTKRDHYLSFPWCVYDKLMQIKENNLRRRERASRMATLDRFGSVLNLGGR 1133
N+G KRDHYLSFPWCVY KLMQ+KENNLR+RERASR+ATLDRF VLNL GR
Sbjct: 1081 NDGMKRDHYLSFPWCVYHKLMQVKENNLRKRERASRLATLDRFSRVLNLDGR 1131
BLAST of Tan0001219 vs. NCBI nr
Match:
XP_022994920.1 (probable RNA-dependent RNA polymerase 1 isoform X1 [Cucurbita maxima])
HSP 1 Score: 2067.7 bits (5356), Expect = 0.0e+00
Identity = 1005/1132 (88.78%), Postives = 1064/1132 (93.99%), Query Frame = 0
Query: 1 MGRTVHINGFPSHVTADAVKIFLEGHTGVGTVYAIKVRPPKRGGTRVYAIVQFTGAAQAE 60
MG+TVHI+GFPSH TAD+VK FLE TG+GTVYAIKVRPPKRGG+RVYAIVQFTGAAQAE
Sbjct: 15 MGKTVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPKRGGSRVYAIVQFTGAAQAE 74
Query: 61 SIISLANRRLWYGSSYLKARVADVDIVPKPRTYVHTLENLTLCFGCQVSGERFHVLWEGG 120
IISLAN+RLWYGSSYLKAR ADVDIVPKPRTYVHTLENLTLCFGCQVS E+FHVLWEG
Sbjct: 75 LIISLANQRLWYGSSYLKARAADVDIVPKPRTYVHTLENLTLCFGCQVSSEKFHVLWEGD 134
Query: 121 VDLVTFGIGMRKMNFCLIHNFVEYRLELSYENIWQIQLHHPQHQSMKYLLIQLYGAPRIY 180
V+LVTFG+ MRKMNF LIHNFVEYR +LSYENIWQIQLH QHQSMK LLIQLYGAPRIY
Sbjct: 135 VELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAPRIY 194
Query: 181 KKVAPSSGQVFDDPHLNFFKEVPDDQWVRTDDFTPSCSIGQSSSLCLKLPNGRQLPNFRQ 240
KKVAPSSGQ+FDDP NFFKEVPDDQ VRT DFTPS SIGQSSSLCLKLPNGRQLPNFR+
Sbjct: 195 KKVAPSSGQIFDDPLFNFFKEVPDDQCVRTADFTPSYSIGQSSSLCLKLPNGRQLPNFRR 254
Query: 241 NFAYYEEFENEFELVDGGDGFSCSKDLVPMVDSRPNVFLPYEIIFKVNVLVQNGCIPGPL 300
+FAYYEEFE+EF+LVDGG+GFSCS DLVP+VDS PNV LPYEIIFKVNVLVQNGCIPGP
Sbjct: 255 HFAYYEEFEDEFKLVDGGNGFSCSDDLVPVVDSHPNVLLPYEIIFKVNVLVQNGCIPGPS 314
Query: 301 LDTGFYRLVDPSRIRIEFVEHALEKLFHLKECSYEPSSFLTEQYRKYSRHPPNSPAISLD 360
LDTGFYRLVDPSRIR+E+VE+ALEKLFHLKEC YEPSSFLTEQY+KY++HP NSPAI+LD
Sbjct: 315 LDTGFYRLVDPSRIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKYAKHPSNSPAIALD 374
Query: 361 AGLVYVRRVQITPCKVYFCGPEVNVSNRVLRQFPQDIDNFLRVTFVDEEWDKMRSIDLLP 420
AGLVYVRRVQITPCKVYFCGPEVNVSNRVLR F +D+DNFLRV+FVDEEWDKMRS DLLP
Sbjct: 375 AGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRSTDLLP 434
Query: 421 RMSSTIKDGKTDIYSRILSVLRNGIVIGAKNFEFLAFSSSQLRDNSLWMFASRPGLDAAA 480
RM+S+I++GKTDIY RILSVL+NGI IG K F+FLAFSSSQLR+NSLWMFASRPGLDAA
Sbjct: 435 RMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPGLDAAV 494
Query: 481 IREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDGI 540
IREWMGDF+HIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDGI
Sbjct: 495 IREWMGDFQHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDGI 554
Query: 541 GKISSDFAKRVAAKCSLQAFTPSAFQIRYGGYKGVVAVDPLSSIKLSLRNSMCKFESDNT 600
GKISSDFAKRVA+KC L AFTPSAFQIRYGGYKGVVAVDP SS+KLSLR SMCKFESDNT
Sbjct: 555 GKISSDFAKRVASKCVL-AFTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKFESDNT 614
Query: 601 KLDVLGYSKYQPCFLNRQVITLLSTLGVKDEVFEKKQREAVEQLDAILTDPLRAQEALEL 660
KLDVLGYSKYQPCFLNRQ+ITLLSTLGVKDEVFEKKQ EA+EQLDAILTDPL+AQEALEL
Sbjct: 615 KLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQEALEL 674
Query: 661 MSPGENTNILKEMLKCGYKPDIEPYLSMMLQTFRASKLLELRTKSRIFIPDGRAVMGCLD 720
MSPGENTNILKEMLKCGYKPD+EPYLSMMLQTFR SKLLELRTKSRIFIP+GRA+MGCLD
Sbjct: 675 MSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAMMGCLD 734
Query: 721 ETGTLEYGQVFVQISSARHRNLSDTFAFNMRGSERCLVIEGNVIVAKNPCLHPGDVRVLR 780
ETGTLEYGQVFVQIS+ARHR++SDT AF+M GSE LVI GNV VAKNPCLHPGDVRVL
Sbjct: 735 ETGTLEYGQVFVQISNARHRHISDTSAFDMSGSEDHLVIVGNVTVAKNPCLHPGDVRVLN 794
Query: 781 AVNIPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQVLPMDYTPA 840
AVN+P LYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQ+ PMDYTPA
Sbjct: 795 AVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTPA 854
Query: 841 PPIQLDRDVRIEDVQEYFVNYMVNDSLGIIANAHTAFADKESFKARSSPCLELAKLFSIA 900
PPIQLDRDV IEDVQEYFVNYMVNDSLGIIANAHTAFADKE FKARS+PC+ELAKLFSIA
Sbjct: 855 PPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELAKLFSIA 914
Query: 901 VDFPKTGVPAIIPSHLNVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPTVSYIRSFT 960
VDFPKTGVPAIIPSHLNVKEFPDFMEKPDR SYESKNVIGKLFRAVK IAP +SYIRSFT
Sbjct: 915 VDFPKTGVPAIIPSHLNVKEFPDFMEKPDRHSYESKNVIGKLFRAVKGIAPNISYIRSFT 974
Query: 961 RDVAMQCYDFDMEVEGFEDYVEDAFYHKNNYDYKLGNLLDYYGIKSEAEILSGSIMRMSK 1020
RDVAM+CYD DME EGFEDYVEDA YHK YDYKLGNLLDYYGIKSE+EI SG+IMRMSK
Sbjct: 975 RDVAMRCYDSDMEAEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGNIMRMSK 1034
Query: 1021 SFTRRRDAEAINLAVRSLRKEARTWFNAKESGPDSGSDDLFAKASAWYHVTYHHSYWGCY 1080
SFTRRRDAEAINLA RSLRKEARTWFN KESG DSGSDDLFAKASAWYHVTYHHSYWG Y
Sbjct: 1035 SFTRRRDAEAINLAARSLRKEARTWFNTKESGLDSGSDDLFAKASAWYHVTYHHSYWGSY 1094
Query: 1081 NEGTKRDHYLSFPWCVYDKLMQIKENNLRRRERASRMATLDRFGSVLNLGGR 1133
N+G KRDHYLSFPWCVY KLMQ+KENNLR+RERASR+ATLDRF VLNL GR
Sbjct: 1095 NDGMKRDHYLSFPWCVYHKLMQVKENNLRKRERASRLATLDRFSRVLNLDGR 1145
BLAST of Tan0001219 vs. ExPASy TrEMBL
Match:
A0A6J1FXH5 (RNA-dependent RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111447985 PE=3 SV=1)
HSP 1 Score: 2070.4 bits (5363), Expect = 0.0e+00
Identity = 1004/1132 (88.69%), Postives = 1063/1132 (93.90%), Query Frame = 0
Query: 1 MGRTVHINGFPSHVTADAVKIFLEGHTGVGTVYAIKVRPPKRGGTRVYAIVQFTGAAQAE 60
MG+TVHI+GFPSH TAD+VK FLE TG+GTVYAIKVRPPKRGG+RVYAIVQF GAAQAE
Sbjct: 1 MGKTVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPKRGGSRVYAIVQFIGAAQAE 60
Query: 61 SIISLANRRLWYGSSYLKARVADVDIVPKPRTYVHTLENLTLCFGCQVSGERFHVLWEGG 120
IISLAN+RLWYGSSYLKAR ADVDIVPKPRTYVHTLE+LTLCFGCQVS E+FHVLWEG
Sbjct: 61 LIISLANQRLWYGSSYLKARAADVDIVPKPRTYVHTLEDLTLCFGCQVSSEKFHVLWEGD 120
Query: 121 VDLVTFGIGMRKMNFCLIHNFVEYRLELSYENIWQIQLHHPQHQSMKYLLIQLYGAPRIY 180
V+LVTFG+ MRKMNF LIHNFVEYR +LSYENIWQIQLH QHQSMK LLIQLYGAPRIY
Sbjct: 121 VELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAPRIY 180
Query: 181 KKVAPSSGQVFDDPHLNFFKEVPDDQWVRTDDFTPSCSIGQSSSLCLKLPNGRQLPNFRQ 240
KKVAPSSGQ+FDDP NFFKEVPDDQWVRT DFTPS S+GQSSSLCLKLPNGRQLPNFR+
Sbjct: 181 KKVAPSSGQIFDDPLFNFFKEVPDDQWVRTADFTPSNSVGQSSSLCLKLPNGRQLPNFRR 240
Query: 241 NFAYYEEFENEFELVDGGDGFSCSKDLVPMVDSRPNVFLPYEIIFKVNVLVQNGCIPGPL 300
+FAYYEEFE+EF+LVDGG+ FSCS DLVP+VDSRPNV LPYEIIFKVNVLVQNGCI GP
Sbjct: 241 HFAYYEEFEDEFKLVDGGNSFSCSDDLVPVVDSRPNVLLPYEIIFKVNVLVQNGCIAGPS 300
Query: 301 LDTGFYRLVDPSRIRIEFVEHALEKLFHLKECSYEPSSFLTEQYRKYSRHPPNSPAISLD 360
LDTGFYRLVDPSRIR+E+VE+ALEKLFHLKEC YEPSSFLTEQY+KY++HP NSPAI+LD
Sbjct: 301 LDTGFYRLVDPSRIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKYAKHPSNSPAIALD 360
Query: 361 AGLVYVRRVQITPCKVYFCGPEVNVSNRVLRQFPQDIDNFLRVTFVDEEWDKMRSIDLLP 420
GLVYVRRVQITPCKVYFCGPEVNVSNRVLR F +D+DNFLRV+FVDEEWDKMRS DLLP
Sbjct: 361 DGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRSTDLLP 420
Query: 421 RMSSTIKDGKTDIYSRILSVLRNGIVIGAKNFEFLAFSSSQLRDNSLWMFASRPGLDAAA 480
RM+S+I++GKTDIY RILSVL+NGI IG K F+FLAFSSSQLR+NSLWMFASRPGLDAA
Sbjct: 421 RMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPGLDAAV 480
Query: 481 IREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDGI 540
IREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDGI
Sbjct: 481 IREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDGI 540
Query: 541 GKISSDFAKRVAAKCSLQAFTPSAFQIRYGGYKGVVAVDPLSSIKLSLRNSMCKFESDNT 600
GKISSDFAKRVA+KC L AFTPSAFQIRYGGYKGVVAVDP SS+KLSLR SMCKFESDNT
Sbjct: 541 GKISSDFAKRVASKCVL-AFTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKFESDNT 600
Query: 601 KLDVLGYSKYQPCFLNRQVITLLSTLGVKDEVFEKKQREAVEQLDAILTDPLRAQEALEL 660
KLDVLGYSKYQPCFLNRQ+ITLLSTLGVKDEVFEKKQ EA+EQLDAILTDPL+AQEALEL
Sbjct: 601 KLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQEALEL 660
Query: 661 MSPGENTNILKEMLKCGYKPDIEPYLSMMLQTFRASKLLELRTKSRIFIPDGRAVMGCLD 720
MSPGENTNILKEMLKCGYKPD+EPYLSMMLQTFR SKLLELRTKSRIFIP+GRA+MGCLD
Sbjct: 661 MSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAMMGCLD 720
Query: 721 ETGTLEYGQVFVQISSARHRNLSDTFAFNMRGSERCLVIEGNVIVAKNPCLHPGDVRVLR 780
ETGTLEYGQVFVQISS RHR++SDT AF+M GSE LVI GNV VAKNPCLHPGDVRVL
Sbjct: 721 ETGTLEYGQVFVQISSVRHRHISDTSAFDMSGSEDHLVIVGNVTVAKNPCLHPGDVRVLN 780
Query: 781 AVNIPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQVLPMDYTPA 840
AVN+P LYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQ+ PMDYTPA
Sbjct: 781 AVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTPA 840
Query: 841 PPIQLDRDVRIEDVQEYFVNYMVNDSLGIIANAHTAFADKESFKARSSPCLELAKLFSIA 900
PPIQLDRDV IEDVQEYFVNYMVNDSLGIIANAHTAFADKE FKARS+PC+ELAKLFSIA
Sbjct: 841 PPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELAKLFSIA 900
Query: 901 VDFPKTGVPAIIPSHLNVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPTVSYIRSFT 960
VDFPKTGVPAIIPSHLNVKEFPDFMEKPDRPSYESKNVIGKLFRAVK IAP +SYIRSFT
Sbjct: 901 VDFPKTGVPAIIPSHLNVKEFPDFMEKPDRPSYESKNVIGKLFRAVKGIAPNISYIRSFT 960
Query: 961 RDVAMQCYDFDMEVEGFEDYVEDAFYHKNNYDYKLGNLLDYYGIKSEAEILSGSIMRMSK 1020
RDVAM+CYD DME EGFEDYVEDA YHK YDYKLGNLLDYYGIKSE+EI SG+IMRMSK
Sbjct: 961 RDVAMRCYDSDMETEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGNIMRMSK 1020
Query: 1021 SFTRRRDAEAINLAVRSLRKEARTWFNAKESGPDSGSDDLFAKASAWYHVTYHHSYWGCY 1080
SFTRRRDAEAINLA RSLRKEARTWFN KESGPDSGSDDLFAKASAWYHVTYHHSYWG Y
Sbjct: 1021 SFTRRRDAEAINLAARSLRKEARTWFNTKESGPDSGSDDLFAKASAWYHVTYHHSYWGSY 1080
Query: 1081 NEGTKRDHYLSFPWCVYDKLMQIKENNLRRRERASRMATLDRFGSVLNLGGR 1133
N+G KRDHYLSFPWCVY KLMQ+KENNLRRRE+ASR+ATLDRF VLNL GR
Sbjct: 1081 NDGMKRDHYLSFPWCVYHKLMQVKENNLRRREKASRLATLDRFSRVLNLDGR 1131
BLAST of Tan0001219 vs. ExPASy TrEMBL
Match:
A0A6J1FSA2 (RNA-dependent RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111447985 PE=3 SV=1)
HSP 1 Score: 2070.4 bits (5363), Expect = 0.0e+00
Identity = 1004/1132 (88.69%), Postives = 1063/1132 (93.90%), Query Frame = 0
Query: 1 MGRTVHINGFPSHVTADAVKIFLEGHTGVGTVYAIKVRPPKRGGTRVYAIVQFTGAAQAE 60
MG+TVHI+GFPSH TAD+VK FLE TG+GTVYAIKVRPPKRGG+RVYAIVQF GAAQAE
Sbjct: 15 MGKTVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPKRGGSRVYAIVQFIGAAQAE 74
Query: 61 SIISLANRRLWYGSSYLKARVADVDIVPKPRTYVHTLENLTLCFGCQVSGERFHVLWEGG 120
IISLAN+RLWYGSSYLKAR ADVDIVPKPRTYVHTLE+LTLCFGCQVS E+FHVLWEG
Sbjct: 75 LIISLANQRLWYGSSYLKARAADVDIVPKPRTYVHTLEDLTLCFGCQVSSEKFHVLWEGD 134
Query: 121 VDLVTFGIGMRKMNFCLIHNFVEYRLELSYENIWQIQLHHPQHQSMKYLLIQLYGAPRIY 180
V+LVTFG+ MRKMNF LIHNFVEYR +LSYENIWQIQLH QHQSMK LLIQLYGAPRIY
Sbjct: 135 VELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAPRIY 194
Query: 181 KKVAPSSGQVFDDPHLNFFKEVPDDQWVRTDDFTPSCSIGQSSSLCLKLPNGRQLPNFRQ 240
KKVAPSSGQ+FDDP NFFKEVPDDQWVRT DFTPS S+GQSSSLCLKLPNGRQLPNFR+
Sbjct: 195 KKVAPSSGQIFDDPLFNFFKEVPDDQWVRTADFTPSNSVGQSSSLCLKLPNGRQLPNFRR 254
Query: 241 NFAYYEEFENEFELVDGGDGFSCSKDLVPMVDSRPNVFLPYEIIFKVNVLVQNGCIPGPL 300
+FAYYEEFE+EF+LVDGG+ FSCS DLVP+VDSRPNV LPYEIIFKVNVLVQNGCI GP
Sbjct: 255 HFAYYEEFEDEFKLVDGGNSFSCSDDLVPVVDSRPNVLLPYEIIFKVNVLVQNGCIAGPS 314
Query: 301 LDTGFYRLVDPSRIRIEFVEHALEKLFHLKECSYEPSSFLTEQYRKYSRHPPNSPAISLD 360
LDTGFYRLVDPSRIR+E+VE+ALEKLFHLKEC YEPSSFLTEQY+KY++HP NSPAI+LD
Sbjct: 315 LDTGFYRLVDPSRIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKYAKHPSNSPAIALD 374
Query: 361 AGLVYVRRVQITPCKVYFCGPEVNVSNRVLRQFPQDIDNFLRVTFVDEEWDKMRSIDLLP 420
GLVYVRRVQITPCKVYFCGPEVNVSNRVLR F +D+DNFLRV+FVDEEWDKMRS DLLP
Sbjct: 375 DGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRSTDLLP 434
Query: 421 RMSSTIKDGKTDIYSRILSVLRNGIVIGAKNFEFLAFSSSQLRDNSLWMFASRPGLDAAA 480
RM+S+I++GKTDIY RILSVL+NGI IG K F+FLAFSSSQLR+NSLWMFASRPGLDAA
Sbjct: 435 RMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPGLDAAV 494
Query: 481 IREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDGI 540
IREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDGI
Sbjct: 495 IREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDGI 554
Query: 541 GKISSDFAKRVAAKCSLQAFTPSAFQIRYGGYKGVVAVDPLSSIKLSLRNSMCKFESDNT 600
GKISSDFAKRVA+KC L AFTPSAFQIRYGGYKGVVAVDP SS+KLSLR SMCKFESDNT
Sbjct: 555 GKISSDFAKRVASKCVL-AFTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKFESDNT 614
Query: 601 KLDVLGYSKYQPCFLNRQVITLLSTLGVKDEVFEKKQREAVEQLDAILTDPLRAQEALEL 660
KLDVLGYSKYQPCFLNRQ+ITLLSTLGVKDEVFEKKQ EA+EQLDAILTDPL+AQEALEL
Sbjct: 615 KLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQEALEL 674
Query: 661 MSPGENTNILKEMLKCGYKPDIEPYLSMMLQTFRASKLLELRTKSRIFIPDGRAVMGCLD 720
MSPGENTNILKEMLKCGYKPD+EPYLSMMLQTFR SKLLELRTKSRIFIP+GRA+MGCLD
Sbjct: 675 MSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAMMGCLD 734
Query: 721 ETGTLEYGQVFVQISSARHRNLSDTFAFNMRGSERCLVIEGNVIVAKNPCLHPGDVRVLR 780
ETGTLEYGQVFVQISS RHR++SDT AF+M GSE LVI GNV VAKNPCLHPGDVRVL
Sbjct: 735 ETGTLEYGQVFVQISSVRHRHISDTSAFDMSGSEDHLVIVGNVTVAKNPCLHPGDVRVLN 794
Query: 781 AVNIPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQVLPMDYTPA 840
AVN+P LYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQ+ PMDYTPA
Sbjct: 795 AVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTPA 854
Query: 841 PPIQLDRDVRIEDVQEYFVNYMVNDSLGIIANAHTAFADKESFKARSSPCLELAKLFSIA 900
PPIQLDRDV IEDVQEYFVNYMVNDSLGIIANAHTAFADKE FKARS+PC+ELAKLFSIA
Sbjct: 855 PPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELAKLFSIA 914
Query: 901 VDFPKTGVPAIIPSHLNVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPTVSYIRSFT 960
VDFPKTGVPAIIPSHLNVKEFPDFMEKPDRPSYESKNVIGKLFRAVK IAP +SYIRSFT
Sbjct: 915 VDFPKTGVPAIIPSHLNVKEFPDFMEKPDRPSYESKNVIGKLFRAVKGIAPNISYIRSFT 974
Query: 961 RDVAMQCYDFDMEVEGFEDYVEDAFYHKNNYDYKLGNLLDYYGIKSEAEILSGSIMRMSK 1020
RDVAM+CYD DME EGFEDYVEDA YHK YDYKLGNLLDYYGIKSE+EI SG+IMRMSK
Sbjct: 975 RDVAMRCYDSDMETEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGNIMRMSK 1034
Query: 1021 SFTRRRDAEAINLAVRSLRKEARTWFNAKESGPDSGSDDLFAKASAWYHVTYHHSYWGCY 1080
SFTRRRDAEAINLA RSLRKEARTWFN KESGPDSGSDDLFAKASAWYHVTYHHSYWG Y
Sbjct: 1035 SFTRRRDAEAINLAARSLRKEARTWFNTKESGPDSGSDDLFAKASAWYHVTYHHSYWGSY 1094
Query: 1081 NEGTKRDHYLSFPWCVYDKLMQIKENNLRRRERASRMATLDRFGSVLNLGGR 1133
N+G KRDHYLSFPWCVY KLMQ+KENNLRRRE+ASR+ATLDRF VLNL GR
Sbjct: 1095 NDGMKRDHYLSFPWCVYHKLMQVKENNLRRREKASRLATLDRFSRVLNLDGR 1145
BLAST of Tan0001219 vs. ExPASy TrEMBL
Match:
A0A6J1K2P9 (RNA-dependent RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111490498 PE=3 SV=1)
HSP 1 Score: 2067.7 bits (5356), Expect = 0.0e+00
Identity = 1005/1132 (88.78%), Postives = 1064/1132 (93.99%), Query Frame = 0
Query: 1 MGRTVHINGFPSHVTADAVKIFLEGHTGVGTVYAIKVRPPKRGGTRVYAIVQFTGAAQAE 60
MG+TVHI+GFPSH TAD+VK FLE TG+GTVYAIKVRPPKRGG+RVYAIVQFTGAAQAE
Sbjct: 1 MGKTVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPKRGGSRVYAIVQFTGAAQAE 60
Query: 61 SIISLANRRLWYGSSYLKARVADVDIVPKPRTYVHTLENLTLCFGCQVSGERFHVLWEGG 120
IISLAN+RLWYGSSYLKAR ADVDIVPKPRTYVHTLENLTLCFGCQVS E+FHVLWEG
Sbjct: 61 LIISLANQRLWYGSSYLKARAADVDIVPKPRTYVHTLENLTLCFGCQVSSEKFHVLWEGD 120
Query: 121 VDLVTFGIGMRKMNFCLIHNFVEYRLELSYENIWQIQLHHPQHQSMKYLLIQLYGAPRIY 180
V+LVTFG+ MRKMNF LIHNFVEYR +LSYENIWQIQLH QHQSMK LLIQLYGAPRIY
Sbjct: 121 VELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAPRIY 180
Query: 181 KKVAPSSGQVFDDPHLNFFKEVPDDQWVRTDDFTPSCSIGQSSSLCLKLPNGRQLPNFRQ 240
KKVAPSSGQ+FDDP NFFKEVPDDQ VRT DFTPS SIGQSSSLCLKLPNGRQLPNFR+
Sbjct: 181 KKVAPSSGQIFDDPLFNFFKEVPDDQCVRTADFTPSYSIGQSSSLCLKLPNGRQLPNFRR 240
Query: 241 NFAYYEEFENEFELVDGGDGFSCSKDLVPMVDSRPNVFLPYEIIFKVNVLVQNGCIPGPL 300
+FAYYEEFE+EF+LVDGG+GFSCS DLVP+VDS PNV LPYEIIFKVNVLVQNGCIPGP
Sbjct: 241 HFAYYEEFEDEFKLVDGGNGFSCSDDLVPVVDSHPNVLLPYEIIFKVNVLVQNGCIPGPS 300
Query: 301 LDTGFYRLVDPSRIRIEFVEHALEKLFHLKECSYEPSSFLTEQYRKYSRHPPNSPAISLD 360
LDTGFYRLVDPSRIR+E+VE+ALEKLFHLKEC YEPSSFLTEQY+KY++HP NSPAI+LD
Sbjct: 301 LDTGFYRLVDPSRIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKYAKHPSNSPAIALD 360
Query: 361 AGLVYVRRVQITPCKVYFCGPEVNVSNRVLRQFPQDIDNFLRVTFVDEEWDKMRSIDLLP 420
AGLVYVRRVQITPCKVYFCGPEVNVSNRVLR F +D+DNFLRV+FVDEEWDKMRS DLLP
Sbjct: 361 AGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRSTDLLP 420
Query: 421 RMSSTIKDGKTDIYSRILSVLRNGIVIGAKNFEFLAFSSSQLRDNSLWMFASRPGLDAAA 480
RM+S+I++GKTDIY RILSVL+NGI IG K F+FLAFSSSQLR+NSLWMFASRPGLDAA
Sbjct: 421 RMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPGLDAAV 480
Query: 481 IREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDGI 540
IREWMGDF+HIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDGI
Sbjct: 481 IREWMGDFQHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDGI 540
Query: 541 GKISSDFAKRVAAKCSLQAFTPSAFQIRYGGYKGVVAVDPLSSIKLSLRNSMCKFESDNT 600
GKISSDFAKRVA+KC L AFTPSAFQIRYGGYKGVVAVDP SS+KLSLR SMCKFESDNT
Sbjct: 541 GKISSDFAKRVASKCVL-AFTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKFESDNT 600
Query: 601 KLDVLGYSKYQPCFLNRQVITLLSTLGVKDEVFEKKQREAVEQLDAILTDPLRAQEALEL 660
KLDVLGYSKYQPCFLNRQ+ITLLSTLGVKDEVFEKKQ EA+EQLDAILTDPL+AQEALEL
Sbjct: 601 KLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQEALEL 660
Query: 661 MSPGENTNILKEMLKCGYKPDIEPYLSMMLQTFRASKLLELRTKSRIFIPDGRAVMGCLD 720
MSPGENTNILKEMLKCGYKPD+EPYLSMMLQTFR SKLLELRTKSRIFIP+GRA+MGCLD
Sbjct: 661 MSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAMMGCLD 720
Query: 721 ETGTLEYGQVFVQISSARHRNLSDTFAFNMRGSERCLVIEGNVIVAKNPCLHPGDVRVLR 780
ETGTLEYGQVFVQIS+ARHR++SDT AF+M GSE LVI GNV VAKNPCLHPGDVRVL
Sbjct: 721 ETGTLEYGQVFVQISNARHRHISDTSAFDMSGSEDHLVIVGNVTVAKNPCLHPGDVRVLN 780
Query: 781 AVNIPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQVLPMDYTPA 840
AVN+P LYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQ+ PMDYTPA
Sbjct: 781 AVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTPA 840
Query: 841 PPIQLDRDVRIEDVQEYFVNYMVNDSLGIIANAHTAFADKESFKARSSPCLELAKLFSIA 900
PPIQLDRDV IEDVQEYFVNYMVNDSLGIIANAHTAFADKE FKARS+PC+ELAKLFSIA
Sbjct: 841 PPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELAKLFSIA 900
Query: 901 VDFPKTGVPAIIPSHLNVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPTVSYIRSFT 960
VDFPKTGVPAIIPSHLNVKEFPDFMEKPDR SYESKNVIGKLFRAVK IAP +SYIRSFT
Sbjct: 901 VDFPKTGVPAIIPSHLNVKEFPDFMEKPDRHSYESKNVIGKLFRAVKGIAPNISYIRSFT 960
Query: 961 RDVAMQCYDFDMEVEGFEDYVEDAFYHKNNYDYKLGNLLDYYGIKSEAEILSGSIMRMSK 1020
RDVAM+CYD DME EGFEDYVEDA YHK YDYKLGNLLDYYGIKSE+EI SG+IMRMSK
Sbjct: 961 RDVAMRCYDSDMEAEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGNIMRMSK 1020
Query: 1021 SFTRRRDAEAINLAVRSLRKEARTWFNAKESGPDSGSDDLFAKASAWYHVTYHHSYWGCY 1080
SFTRRRDAEAINLA RSLRKEARTWFN KESG DSGSDDLFAKASAWYHVTYHHSYWG Y
Sbjct: 1021 SFTRRRDAEAINLAARSLRKEARTWFNTKESGLDSGSDDLFAKASAWYHVTYHHSYWGSY 1080
Query: 1081 NEGTKRDHYLSFPWCVYDKLMQIKENNLRRRERASRMATLDRFGSVLNLGGR 1133
N+G KRDHYLSFPWCVY KLMQ+KENNLR+RERASR+ATLDRF VLNL GR
Sbjct: 1081 NDGMKRDHYLSFPWCVYHKLMQVKENNLRKRERASRLATLDRFSRVLNLDGR 1131
BLAST of Tan0001219 vs. ExPASy TrEMBL
Match:
A0A6J1K2N6 (RNA-dependent RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111490498 PE=3 SV=1)
HSP 1 Score: 2067.7 bits (5356), Expect = 0.0e+00
Identity = 1005/1132 (88.78%), Postives = 1064/1132 (93.99%), Query Frame = 0
Query: 1 MGRTVHINGFPSHVTADAVKIFLEGHTGVGTVYAIKVRPPKRGGTRVYAIVQFTGAAQAE 60
MG+TVHI+GFPSH TAD+VK FLE TG+GTVYAIKVRPPKRGG+RVYAIVQFTGAAQAE
Sbjct: 15 MGKTVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPKRGGSRVYAIVQFTGAAQAE 74
Query: 61 SIISLANRRLWYGSSYLKARVADVDIVPKPRTYVHTLENLTLCFGCQVSGERFHVLWEGG 120
IISLAN+RLWYGSSYLKAR ADVDIVPKPRTYVHTLENLTLCFGCQVS E+FHVLWEG
Sbjct: 75 LIISLANQRLWYGSSYLKARAADVDIVPKPRTYVHTLENLTLCFGCQVSSEKFHVLWEGD 134
Query: 121 VDLVTFGIGMRKMNFCLIHNFVEYRLELSYENIWQIQLHHPQHQSMKYLLIQLYGAPRIY 180
V+LVTFG+ MRKMNF LIHNFVEYR +LSYENIWQIQLH QHQSMK LLIQLYGAPRIY
Sbjct: 135 VELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAPRIY 194
Query: 181 KKVAPSSGQVFDDPHLNFFKEVPDDQWVRTDDFTPSCSIGQSSSLCLKLPNGRQLPNFRQ 240
KKVAPSSGQ+FDDP NFFKEVPDDQ VRT DFTPS SIGQSSSLCLKLPNGRQLPNFR+
Sbjct: 195 KKVAPSSGQIFDDPLFNFFKEVPDDQCVRTADFTPSYSIGQSSSLCLKLPNGRQLPNFRR 254
Query: 241 NFAYYEEFENEFELVDGGDGFSCSKDLVPMVDSRPNVFLPYEIIFKVNVLVQNGCIPGPL 300
+FAYYEEFE+EF+LVDGG+GFSCS DLVP+VDS PNV LPYEIIFKVNVLVQNGCIPGP
Sbjct: 255 HFAYYEEFEDEFKLVDGGNGFSCSDDLVPVVDSHPNVLLPYEIIFKVNVLVQNGCIPGPS 314
Query: 301 LDTGFYRLVDPSRIRIEFVEHALEKLFHLKECSYEPSSFLTEQYRKYSRHPPNSPAISLD 360
LDTGFYRLVDPSRIR+E+VE+ALEKLFHLKEC YEPSSFLTEQY+KY++HP NSPAI+LD
Sbjct: 315 LDTGFYRLVDPSRIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKYAKHPSNSPAIALD 374
Query: 361 AGLVYVRRVQITPCKVYFCGPEVNVSNRVLRQFPQDIDNFLRVTFVDEEWDKMRSIDLLP 420
AGLVYVRRVQITPCKVYFCGPEVNVSNRVLR F +D+DNFLRV+FVDEEWDKMRS DLLP
Sbjct: 375 AGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRSTDLLP 434
Query: 421 RMSSTIKDGKTDIYSRILSVLRNGIVIGAKNFEFLAFSSSQLRDNSLWMFASRPGLDAAA 480
RM+S+I++GKTDIY RILSVL+NGI IG K F+FLAFSSSQLR+NSLWMFASRPGLDAA
Sbjct: 435 RMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPGLDAAV 494
Query: 481 IREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDGI 540
IREWMGDF+HIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDGI
Sbjct: 495 IREWMGDFQHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDGI 554
Query: 541 GKISSDFAKRVAAKCSLQAFTPSAFQIRYGGYKGVVAVDPLSSIKLSLRNSMCKFESDNT 600
GKISSDFAKRVA+KC L AFTPSAFQIRYGGYKGVVAVDP SS+KLSLR SMCKFESDNT
Sbjct: 555 GKISSDFAKRVASKCVL-AFTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKFESDNT 614
Query: 601 KLDVLGYSKYQPCFLNRQVITLLSTLGVKDEVFEKKQREAVEQLDAILTDPLRAQEALEL 660
KLDVLGYSKYQPCFLNRQ+ITLLSTLGVKDEVFEKKQ EA+EQLDAILTDPL+AQEALEL
Sbjct: 615 KLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQEALEL 674
Query: 661 MSPGENTNILKEMLKCGYKPDIEPYLSMMLQTFRASKLLELRTKSRIFIPDGRAVMGCLD 720
MSPGENTNILKEMLKCGYKPD+EPYLSMMLQTFR SKLLELRTKSRIFIP+GRA+MGCLD
Sbjct: 675 MSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAMMGCLD 734
Query: 721 ETGTLEYGQVFVQISSARHRNLSDTFAFNMRGSERCLVIEGNVIVAKNPCLHPGDVRVLR 780
ETGTLEYGQVFVQIS+ARHR++SDT AF+M GSE LVI GNV VAKNPCLHPGDVRVL
Sbjct: 735 ETGTLEYGQVFVQISNARHRHISDTSAFDMSGSEDHLVIVGNVTVAKNPCLHPGDVRVLN 794
Query: 781 AVNIPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQVLPMDYTPA 840
AVN+P LYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQ+ PMDYTPA
Sbjct: 795 AVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTPA 854
Query: 841 PPIQLDRDVRIEDVQEYFVNYMVNDSLGIIANAHTAFADKESFKARSSPCLELAKLFSIA 900
PPIQLDRDV IEDVQEYFVNYMVNDSLGIIANAHTAFADKE FKARS+PC+ELAKLFSIA
Sbjct: 855 PPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELAKLFSIA 914
Query: 901 VDFPKTGVPAIIPSHLNVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPTVSYIRSFT 960
VDFPKTGVPAIIPSHLNVKEFPDFMEKPDR SYESKNVIGKLFRAVK IAP +SYIRSFT
Sbjct: 915 VDFPKTGVPAIIPSHLNVKEFPDFMEKPDRHSYESKNVIGKLFRAVKGIAPNISYIRSFT 974
Query: 961 RDVAMQCYDFDMEVEGFEDYVEDAFYHKNNYDYKLGNLLDYYGIKSEAEILSGSIMRMSK 1020
RDVAM+CYD DME EGFEDYVEDA YHK YDYKLGNLLDYYGIKSE+EI SG+IMRMSK
Sbjct: 975 RDVAMRCYDSDMEAEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGNIMRMSK 1034
Query: 1021 SFTRRRDAEAINLAVRSLRKEARTWFNAKESGPDSGSDDLFAKASAWYHVTYHHSYWGCY 1080
SFTRRRDAEAINLA RSLRKEARTWFN KESG DSGSDDLFAKASAWYHVTYHHSYWG Y
Sbjct: 1035 SFTRRRDAEAINLAARSLRKEARTWFNTKESGLDSGSDDLFAKASAWYHVTYHHSYWGSY 1094
Query: 1081 NEGTKRDHYLSFPWCVYDKLMQIKENNLRRRERASRMATLDRFGSVLNLGGR 1133
N+G KRDHYLSFPWCVY KLMQ+KENNLR+RERASR+ATLDRF VLNL GR
Sbjct: 1095 NDGMKRDHYLSFPWCVYHKLMQVKENNLRKRERASRLATLDRFSRVLNLDGR 1145
BLAST of Tan0001219 vs. ExPASy TrEMBL
Match:
A0A1S3CPY1 (RNA-dependent RNA polymerase OS=Cucumis melo OX=3656 GN=LOC103502906 PE=3 SV=1)
HSP 1 Score: 1976.8 bits (5120), Expect = 0.0e+00
Identity = 969/1133 (85.53%), Postives = 1035/1133 (91.35%), Query Frame = 0
Query: 1 MGRTVHINGFPSHVTADAVKIFLEGHTGVGTVYAIKVRPPKRGGTRVYAIVQFTGAAQAE 60
MG+T+HI+GFPSHVTADAVK FLEGHTG GTVYAIKVRPPKRGG R+YAIVQFT A QAE
Sbjct: 1 MGKTIHISGFPSHVTADAVKNFLEGHTGPGTVYAIKVRPPKRGGGRLYAIVQFTSATQAE 60
Query: 61 SIISLANRRLWYGSSYLKARVADVDIVPKPRTYVHTLENLTLCFGCQVSGERFHVLWEGG 120
I+SLAN+RLWYGSSYLKAR +VDIVPKP+TY++ L++L LCFGCQVS E+F VLWEG
Sbjct: 61 LIVSLANQRLWYGSSYLKARSTEVDIVPKPKTYMYMLKDLLLCFGCQVSSEKFRVLWEGN 120
Query: 121 VDLVTFGIGMRKMNFCLIHNFVEYRLELSYENIWQIQLHHPQHQSMKYLLIQLYGAPRIY 180
VDLVTFGIGMRKMNF L +N VEYRLELSYENIWQIQLH PQ QSMKYLLIQLYGAPRIY
Sbjct: 121 VDLVTFGIGMRKMNFHLKYNSVEYRLELSYENIWQIQLHSPQCQSMKYLLIQLYGAPRIY 180
Query: 181 KKVAPSSGQVFDDPHLNFFKEVPDDQWVRTDDFTPSCSIGQSSSLCLKLPNGRQLPNFRQ 240
KKVAPSSGQ+FD+P LNFF EVPDDQWVRT DFT SCSIGQSSSLCLKLPNG +LP F+Q
Sbjct: 181 KKVAPSSGQIFDNPILNFFMEVPDDQWVRTTDFTSSCSIGQSSSLCLKLPNGLELPTFKQ 240
Query: 241 NFAYYEEFENEFELVDGGDGFSCSKDLVPMVDSRPNVFLPYEIIFKVNVLVQNGCIPGPL 300
NFAYYEEFE+EF L+D FS +DL P+VDSRP+V LPYEIIFK+N LVQ+GCIP L
Sbjct: 241 NFAYYEEFEHEFRLIDEDASFSFCRDLAPIVDSRPHV-LPYEIIFKINALVQHGCIPWSL 300
Query: 301 LDTGFYRLVDP-SRIRIEFVEHALEKLFHLKECSYEPSSFLTEQYRKYSRHPPNSPAISL 360
LDT FYRLV+ IRIEFVEHALEKLFHLKEC+Y+PS+FLTEQ+R+YSRHPPNSP ISL
Sbjct: 301 LDTSFYRLVERIITIRIEFVEHALEKLFHLKECNYDPSNFLTEQFRRYSRHPPNSPVISL 360
Query: 361 DAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRQFPQDIDNFLRVTFVDEEWDKMRSIDLL 420
D GLVYVRRVQITPCKVYFCGPEVNVSNRVLR F + IDNFLRV+FVDEEWDKMRS DLL
Sbjct: 361 DDGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSKYIDNFLRVSFVDEEWDKMRSTDLL 420
Query: 421 PRMSSTIKDGKTDIYSRILSVLRNGIVIGAKNFEFLAFSSSQLRDNSLWMFASRPGLDAA 480
PRMSS +D KTDIY RILSVL+NGIVIG K F+FLAFSSSQLRDNSLWMFAS P +DAA
Sbjct: 421 PRMSSKSEDSKTDIYRRILSVLKNGIVIGDKTFQFLAFSSSQLRDNSLWMFASGPDIDAA 480
Query: 481 AIREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDG 540
IR WMGDFRHIKNPAKYAARLGQSFGSSTE LSVA +EREIIPDIEVQHGEVKYVFSDG
Sbjct: 481 YIRAWMGDFRHIKNPAKYAARLGQSFGSSTEALSVASNEREIIPDIEVQHGEVKYVFSDG 540
Query: 541 IGKISSDFAKRVAAKCSLQAFTPSAFQIRYGGYKGVVAVDPLSSIKLSLRNSMCKFESDN 600
IGKISS FAK VA KC QA PSAFQIRYGGYKGVVAVDP S+IKLSLR SMCKFESDN
Sbjct: 541 IGKISSKFAKEVATKCGFQA-VPSAFQIRYGGYKGVVAVDPYSTIKLSLRKSMCKFESDN 600
Query: 601 TKLDVLGYSKYQPCFLNRQVITLLSTLGVKDEVFEKKQREAVEQLDAILTDPLRAQEALE 660
KLDVLG+SKYQPCFLNRQ+ITLLSTLGV+DE+FEKKQ EAVEQLDAILTDPL+AQEALE
Sbjct: 601 IKLDVLGHSKYQPCFLNRQLITLLSTLGVRDEIFEKKQSEAVEQLDAILTDPLKAQEALE 660
Query: 661 LMSPGENTNILKEMLKCGYKPDIEPYLSMMLQTFRASKLLELRTKSRIFIPDGRAVMGCL 720
LMSPGENTNILKEMLKCGYKPD+EPYLSMMLQTFRASKLLELRTKSRIFIP+GRA+MGCL
Sbjct: 661 LMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGCL 720
Query: 721 DETGTLEYGQVFVQISSARHRNLSDTFAFNMRGSERCLVIEGNVIVAKNPCLHPGDVRVL 780
DET TLEYGQVFVQIS RHRNLS++FAFN G E CLVIEG V VAKNPCLHPGDVRVL
Sbjct: 721 DETMTLEYGQVFVQISGGRHRNLSESFAFN-SGQEHCLVIEGKVTVAKNPCLHPGDVRVL 780
Query: 781 RAVNIPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQVLPMDYTP 840
+AVN+P LYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQ+ PMDYTP
Sbjct: 781 KAVNVPGLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQITPMDYTP 840
Query: 841 APPIQLDRDVRIEDVQEYFVNYMVNDSLGIIANAHTAFADKESFKARSSPCLELAKLFSI 900
A PI+LDRDV ED+QEYFVNYMVNDSLGIIANAHTAFADKE FKARSSPC+ELAK FSI
Sbjct: 841 ALPIELDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSSPCVELAKQFSI 900
Query: 901 AVDFPKTGVPAIIPSHLNVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPTVSYIRSF 960
AVDFPKTGVPAIIPSHL VKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPT+S+I+ F
Sbjct: 901 AVDFPKTGVPAIIPSHLYVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPTLSHIQPF 960
Query: 961 TRDVAMQCYDFDMEVEGFEDYVEDAFYHKNNYDYKLGNLLDYYGIKSEAEILSGSIMRMS 1020
TRDVA +CYD DMEVEGFEDY EDAFYHK+NYD KLGNLLDYYGIKSEAEILSGSIMRMS
Sbjct: 961 TRDVARRCYDCDMEVEGFEDYFEDAFYHKSNYDDKLGNLLDYYGIKSEAEILSGSIMRMS 1020
Query: 1021 KSFTRRRDAEAINLAVRSLRKEARTWFNAKESGPDSGSDDLFAKASAWYHVTYHHSYWGC 1080
KSFTRRRDAEAINLAVRSLRKEARTWFNA+E G DS SDDLFAKASAWY+VTYHHSYWGC
Sbjct: 1021 KSFTRRRDAEAINLAVRSLRKEARTWFNARE-GADSNSDDLFAKASAWYYVTYHHSYWGC 1080
Query: 1081 YNEGTKRDHYLSFPWCVYDKLMQIKENNLRRRERASRMATLDRFGSVLNLGGR 1133
YNEG KRDHYLSFPWC+YDKLMQIKENNLR+RERA+R+AT DRFG VLNLGGR
Sbjct: 1081 YNEGMKRDHYLSFPWCIYDKLMQIKENNLRKRERAARLATFDRFGHVLNLGGR 1129
BLAST of Tan0001219 vs. TAIR 10
Match:
AT1G14790.1 (RNA-dependent RNA polymerase 1 )
HSP 1 Score: 1422.5 bits (3681), Expect = 0.0e+00
Identity = 721/1133 (63.64%), Postives = 859/1133 (75.82%), Query Frame = 0
Query: 1 MGRTVHINGFPSHVTADAVKIFLEGHTGVGTVYAIKVRPPKRGGTRVYAIVQFTGAAQAE 60
MG+T+ + GFP+ V+A+ VK FLE TG GTVYAIKVR PK+GG RVYAIVQFT
Sbjct: 1 MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGPRVYAIVQFTSERHTR 60
Query: 61 SIISLANRRLWYGSSYLKARVADVDIVPKPRTYVHTLENLTLCFGCQVSGERFHVLWEGG 120
II+ A RL+YG SYLKA + DIVPKPR +HT+ L + FGCQVS ++F LW
Sbjct: 61 LIITAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTLWSAQ 120
Query: 121 VDLVTFGIGMRKMNFCLIHNFVEYRLELSYENIWQIQLHHPQHQSMKYLLIQLYGAPRIY 180
V+FGIGMRK++F +YRLELSYENIWQI LH PQ +S K+L+IQ+ GAP+I+
Sbjct: 121 DVCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAPKIF 180
Query: 181 KKVAPSSGQVFDDPHLNFFKEVPDDQWVRTDDFTPSCSIGQSSSLCLKLPNGRQLPNFRQ 240
+K +F ++F+ + D+QW+RT DFT S IGQS++ CL+LP +P+FR+
Sbjct: 181 EKEDQPINLLFG--IMDFYSDGSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNVPDFRE 240
Query: 241 NFAYYEEFENEFELVDGGDGFSCSKD-LVPMVDSRPNVFLPYEIIFKVNVLVQNGCIPGP 300
NFA Y E L++ G +S + + LVP+VD P LP+EI+FK+N LVQN C+ GP
Sbjct: 241 NFANYAEHRASSFLIESGSSYSSNANTLVPVVDPPPGFSLPFEILFKLNTLVQNACLSGP 300
Query: 301 LLDTGFYRLVDPSRIRIEFVEHALEKLFHLKECSYEPSSFLTEQYRKY--SRHPPNSPAI 360
LD FYRL++ + ++H LEKLFHL EC YEP+ +L ++Y+K+ P SP I
Sbjct: 301 ALDLDFYRLLNQKKYDRALIDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGKLPLSPTI 360
Query: 361 SLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRQFPQDIDNFLRVTFVDEEWDKMRSID 420
SLD GLVY+ RVQ+TP +VYF GPEVNVSNRVLR + + I+NFLRV+FVDE+ +K+RS+D
Sbjct: 361 SLDDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVRSMD 420
Query: 421 LLPRMSSTIKDGKTDIYSRILSVLRNGIVIGAKNFEFLAFSSSQLRDNSLWMFASRPGLD 480
L PR S+ +T +Y RI SVLR+GIVIG K FEFLAFSSSQLR+NS WMFA +
Sbjct: 421 LSPRSST---QRRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIDRIT 480
Query: 481 AAAIREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFS 540
AA IR WMGDF HI+N AKYAARLGQSF SS ETL+V E E+IPD+E+ +YVFS
Sbjct: 481 AAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGTRYVFS 540
Query: 541 DGIGKISSDFAKRVAAKCSLQAFTPSAFQIRYGGYKGVVAVDPLSSIKLSLRNSMCKFES 600
DGIGKIS++FA++VA KC L F+PSAFQIRYGGYKGVVAVDP SS KLSLR SM KFES
Sbjct: 541 DGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSMSKFES 600
Query: 601 DNTKLDVLGYSKYQPCFLNRQVITLLSTLGVKDEVFEKKQREAVEQLDAILTDPLRAQEA 660
+NTKLDVL +SKYQPC++NRQ+ITLLSTLGV D VFEKKQRE V++LDAILT PL A EA
Sbjct: 601 ENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPLEAHEA 660
Query: 661 LELMSPGENTNILKEMLKCGYKPDIEPYLSMMLQTFRASKLLELRTKSRIFIPDGRAVMG 720
L LM+PGENTNILK ++ CGYKPD EP+LSMMLQ FRASKLLELRTK+RIFI GR++MG
Sbjct: 661 LGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGGRSMMG 720
Query: 721 CLDETGTLEYGQVFVQISSARHRNLSDTFAFNMRGSERCLVIEGNVIVAKNPCLHPGDVR 780
CLDET TLEYGQV VQ S MR R +I G V+VAKNPCLHPGDVR
Sbjct: 721 CLDETRTLEYGQVVVQYSDP------------MRPGRR-FIITGPVVVAKNPCLHPGDVR 780
Query: 781 VLRAVNIPRLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQVLPMDY 840
VL+AVN+P L HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD EL+PPR PMDY
Sbjct: 781 VLQAVNVPALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPPRTSEPMDY 840
Query: 841 TPAPPIQLDRDVRIEDVQEYFVNYMVNDSLGIIANAHTAFADKESFKARSSPCLELAKLF 900
TP P LD DV IE+V+EYF NY+VNDSLGIIANAHTAFADKE KA S PC+ELAK F
Sbjct: 841 TPEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELAKKF 900
Query: 901 SIAVDFPKTGVPAIIPSHLNVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPTVSYIR 960
S AVDFPKTGV A+IP HL VKE+PDFMEKPD+P+YESKNVIGKLFR VK+ AP + I+
Sbjct: 901 STAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERAPPLISIK 960
Query: 961 SFTRDVAMQCYDFDMEVEGFEDYVEDAFYHKNNYDYKLGNLLDYYGIKSEAEILSGSIMR 1020
SFT DVA + YD DMEV+GFE+YV++AFY K NYD+KLGNL+DYYGIK+EAEILSG IMR
Sbjct: 961 SFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGGIMR 1020
Query: 1021 MSKSFTRRRDAEAINLAVRSLRKEARTWFNAKESGPDSGSDDLFAKASAWYHVTYHHSYW 1080
MSKSFT+RRDAE+I AVR+LRKE + FNA E ++ AKASAWYHVTYH SYW
Sbjct: 1021 MSKSFTKRRDAESIGRAVRALRKETLSLFNASEE-----EENESAKASAWYHVTYHSSYW 1080
Query: 1081 GCYNEGTKRDHYLSFPWCVYDKLMQIKENNLRRRERASRMATLDRFGSVLNLG 1131
G YNEG RDH+LSF WCVYDKL++IK+ NL RR+ R TL+R VL G
Sbjct: 1081 GLYNEGLNRDHFLSFAWCVYDKLVRIKKTNLGRRQ---RQETLERLDHVLRFG 1107
BLAST of Tan0001219 vs. TAIR 10
Match:
AT4G11130.1 (RNA-dependent RNA polymerase 2 )
HSP 1 Score: 761.1 bits (1964), Expect = 1.2e-219
Identity = 450/1133 (39.72%), Postives = 661/1133 (58.34%), Query Frame = 0
Query: 4 TVHINGFPSHVTADAVKIFLEGHTGVGTVYAIKVRPPKRGG--TRVYAIVQFTG-AAQAE 63
TV I+ P + AD + FLE H G TV+A+++ P R R +A VQFT ++
Sbjct: 11 TVKISNVPQTIVADELLRFLELHLGEDTVFALEI-PTTRDNWKPRDFARVQFTTLEVKSR 70
Query: 64 SIISLANRRLWYGSSYLKARVADVDIVPKPRTYVHTLENLTLCFGCQVSGE-RFHVL--W 123
+ + + +L + + L+ A DI+P+P L+++ L G S E RF L W
Sbjct: 71 AQLLSSQSKLLFKTHNLRLSEAYDDIIPRPVDPRKRLDDIVLTVGFPESDEKRFCALEKW 130
Query: 124 EGGVDLVTFGIGMRKMNFCLIHNFVEYRLELSYENIWQIQ--LHHPQHQSMKYLLIQLYG 183
+G + R++ F + + Y++E+ +E+I + + + L++L
Sbjct: 131 DGVRCWIL--TEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGDASEIDAFLLKLKY 190
Query: 184 APRIYKKVAPSSGQVFDDPHLNFFKEVPDDQWVRTDDFTPSCSIGQSSSLCLKLPNGRQL 243
P+++K+V F F KE D W+RT DF+ S SIG S+ CL++ NG +
Sbjct: 191 GPKVFKRVTVHIATKFKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTSTCFCLEVHNGSTM 250
Query: 244 PNFRQNFAYYEEFENEFELVDGGDGFSCSKDLVPMVDSR-PNVFLPYEIIFKVNVLVQNG 303
+ YY E VD G F+ + +VP++++ + PYEI+F++N LV
Sbjct: 251 LDIFSGLPYYREDTLSLTYVD-GKTFASAAQIVPLLNAAILGLEFPYEILFQLNALVHAQ 310
Query: 304 CIPGPLLDTGFYRLVDPSR-IRIEFVEHALEKLFHLKECSYEPSSFLTEQYRKYSRHPPN 363
I L L+ R + +E L+KL Y+P F+ Q + + +
Sbjct: 311 KI--SLFAASDMELIKILRGMSLETALVILKKLHQQSSICYDPVFFVKTQMQSVVKKMKH 370
Query: 364 SPAIS----LDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRQFPQDIDNFLRVTFVDEE 423
SPA + + ++ +R +TP K+Y GPE+ +N V++ F + + +F+RVTFV+E+
Sbjct: 371 SPASAYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSDFMRVTFVEED 430
Query: 424 WDKM--RSIDLLPRMSSTIKDGKTDIYSRILSVLRNGIVIGAKNFEFLAFSSSQLRDNSL 483
W K+ ++ + + +K +T+IY+R+LS+L GI +G K FEFLAFS+SQLR NS+
Sbjct: 431 WSKLPANALSVNSKEGYFVKPSRTNIYNRVLSILGEGITVGPKRFEFLAFSASQLRGNSV 490
Query: 484 WMFASRPGLDAAAIREWMGDFRHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEV 543
WMFAS + A IREWMG FR I++ +K AAR+GQ F +S +TL V + E IPDIEV
Sbjct: 491 WMFASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQDVEQIPDIEV 550
Query: 544 QHGEVKYVFSDGIGKISSDFAKRVAAKCSLQAFTPSAFQIRYGGYKGVVAVDPLSSIKLS 603
Y FSDGIGKIS FAK+VA KC L + PSAFQIRYGGYKGV+AVD S KLS
Sbjct: 551 TTDGADYCFSDGIGKISLAFAKQVAQKCGL-SHVPSAFQIRYGGYKGVIAVDRSSFRKLS 610
Query: 604 LRNSMCKFESDNTKLDVLGYSKYQPCFLNRQVITLLSTLGVKDEVFEKKQREAVEQLDAI 663
LR+SM KF+S+N L+V +++ PCFLNR++I LLSTLG++D +FE Q + L +
Sbjct: 611 LRDSMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQAVHLSMLGNM 670
Query: 664 LTDPLRAQEALELMSPGENTNILKEMLKCGYKPDIEPYLSMMLQTFRASKLLELRTKSRI 723
L D A L+ +S + N+L +ML GY P EPYLSMML+ S+L EL+++ RI
Sbjct: 671 LEDRDAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQLSELKSRCRI 730
Query: 724 FIPDGRAVMGCLDETGTLEYGQVFVQISSARHRNLSDTFAFNMRGSERCLVIEGNVIVAK 783
+P GR ++GC+DE G LEYGQV+V+++ + S ++ + E V+ G V+V K
Sbjct: 731 LVPKGRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEETSVVIGKVVVTK 790
Query: 784 NPCLHPGDVRVLRAVNIPRLYH--MVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTE 843
NPCLHPGD+RVL A+ +DC++FPQKG RPHPNECSG DLDGD +FV WD +
Sbjct: 791 NPCLHPGDIRVLDAIYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDGDQFFVSWDEK 850
Query: 844 LIPPRQVLPMDYTPAPPIQLDRDVRIEDVQEYFVNYMVNDSLGIIANAHTAFADKESFKA 903
+IP PMDY + P +D DV +E++ ++FV+YM++D+LG+I+ AH AD++ KA
Sbjct: 851 IIPSEMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHLVHADRDPEKA 910
Query: 904 RSSPCLELAKLFSIAVDFPKTGVPAIIPSHLNVKEFPDFMEKPDRPSYESKNVIGKLFRA 963
RS CLELA L S AVDF KTG PA +P L +EFPDF+E+ ++P+Y S++V GKL+RA
Sbjct: 911 RSQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISESVFGKLYRA 970
Query: 964 VKDIAPTVSYIRSFTRDVAMQCYDFDMEVEGFEDYVEDAFYHKNNYDYKLGNLLDYYGIK 1023
VK +++ + YD +E GFE ++E A H++ Y KL +L+ YYG
Sbjct: 971 VKS---SLAQRKPEAESEDTVAYDVTLEEAGFESFIETAKAHRDMYGEKLTSLMIYYGAA 1030
Query: 1024 SEAEILSGSI----MRMSKSFTRRRD-AEAINLAVRSLRKEARTWFNAKESGPDSGSDDL 1083
+E EIL+G + M +++ R D + I L+V+ L KEA WF S D+
Sbjct: 1031 NEEEILTGILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFE------KSCEDEQ 1090
Query: 1084 FAK--ASAWYHVTYHHSYWGCYNEGTKRDHYLSFPWCVYDKLMQIKENNLRRR 1112
K ASAWY+VTY+ N ++ +LSFPW V D L+ IK N +R+
Sbjct: 1091 QKKKLASAWYYVTYNP------NHRDEKLTFLSFPWIVGDVLLDIKAENAQRQ 1121
BLAST of Tan0001219 vs. TAIR 10
Match:
AT3G49500.1 (RNA-dependent RNA polymerase 6 )
HSP 1 Score: 589.0 bits (1517), Expect = 8.3e-168
Identity = 401/1102 (36.39%), Postives = 574/1102 (52.09%), Query Frame = 0
Query: 92 TYVHTLENLTLCFGCQVSGERFHVLWEG-GVDLV------TFGIGMRK-----MNFCLIH 151
T + L +TL G VS + F V W GVD + T RK ++H
Sbjct: 127 TVPYKLAGITLEIGTLVSRDDFFVSWRAEGVDFLVDPFDNTCKFCFRKSTAFSFKDAVMH 186
Query: 152 NFV--EYRLELSYENIWQIQLHHPQHQSMKYLLIQLYGAPRIYKKVAPSS------GQVF 211
+ +Y+LEL +I ++ + H + L++QL +PR++ + A G +
Sbjct: 187 AVINCDYKLELLVRDIQTVRQYKTLHGFV--LILQLASSPRVWYRTADDDIYDTVPGDLL 246
Query: 212 DDPHLNFFKEVPDDQWVRTDDFTPSCSIGQSSSLCLKL---------------------- 271
DD DD W+RT DFT +IG+ S + +
Sbjct: 247 DD----------DDPWIRTTDFTQVGAIGRCHSYRVLISPRYENKLRTALDYFRMRRVQE 306
Query: 272 PNGRQLPNFRQNFAYYEEFENEFELVDGGDGFSCSKDLVPMVDSRPNVFLPYEIIFKVNV 331
R P R + E + F + +G S +EI+F VN
Sbjct: 307 ERVRWPPRIRNEPCFGEPVSDHFFCIHHKEGIS------------------FEIMFLVNS 366
Query: 332 LVQNGCIPGPLLDTGFYRLV--DPSRIRIEFVEHALEKLFHLKECSYEPSSFLTEQYRK- 391
++ G L F+ L+ P + I ++H C+Y+ F + Y++
Sbjct: 367 VLHRGVFNQFQLTERFFDLLRNQPKDVNIASLKHL---------CTYKRPVF--DAYKRL 426
Query: 392 ------YSRHPPNSPAISLDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRQFPQDIDNF 451
++P + + +RR+ ITP + Y PEV +SNRVLR++ + F
Sbjct: 427 KLVQEWIQKNPKLLGSHEQSEDISEIRRLVITPTRAYCLPPEVELSNRVLRRYKAVAERF 486
Query: 452 LRVTFVDEEWDKMRSIDLLPRMSSTIKD-------GKTDIYSRILSVLRNGIVIGAKNFE 511
LRVTF+DE + S L ++ +KD KT ++ R+ S+L +G + + +
Sbjct: 487 LRVTFMDESMQTINSNVLSYFVAPIVKDLTSSSFSQKTYVFKRVKSILTDGFKLCGRKYS 546
Query: 512 FLAFSSSQLRDNSLWMFASRPGLDAAAIREWMGDFRHIKNPAKYAARLGQSFGSSTETLS 571
FLAFS++QLRD S W FA + I+ WMG F+ KN AK AAR+G F S+ T+
Sbjct: 547 FLAFSANQLRDRSAWFFAEDGKTRVSDIKTWMGKFKD-KNVAKCAARMGLCFSSTYATVD 606
Query: 572 VARHEREI-IPDIEVQHGEVKYVFSDGIGKISSDFAKRVAAKCSLQA-FTPSAFQIRYGG 631
V HE + +PDIE ++G YVFSDGIG I+ D A V K L ++P A+QIRY G
Sbjct: 607 VMPHEVDTEVPDIE-RNG---YVFSDGIGTITPDLADEVMEKLKLDVHYSPCAYQIRYAG 666
Query: 632 YKGVVAVDPLSS--IKLSLRNSMCKFESDNTKLDVLGYSKYQPCFLNRQVITLLSTLGVK 691
+KGVVA P S I+L+LR+SM KF S +T L++ ++++QP FLNRQ+ITLLS LGV
Sbjct: 667 FKGVVARWPSKSDGIRLALRDSMKKFFSKHTILEICSWTRFQPGFLNRQIITLLSVLGVP 726
Query: 692 DEVFEKKQREAVEQLDAILTDPLRAQEALELMSPGENTNILKEMLKCGYKPDIEPYLSMM 751
DE+F Q + +L+ IL D A E L S E N ML G+KP EP+L M
Sbjct: 727 DEIFWDMQESMLYKLNRILDDTDVAFEVL-TASCAEQGNTAAIMLSAGFKPKTEPHLRGM 786
Query: 752 LQTFRASKLLELRTKSRIFIPDGRAVMGCLDETGTLEYGQVFVQISSARHRNLSDTFAFN 811
L + R ++L LR KSRIF+ GR +MGCLDE G LE+GQ F+Q+S N
Sbjct: 787 LSSVRIAQLWGLREKSRIFVTSGRWLMGCLDEAGILEHGQCFIQVSKPSIENCFSKHGSR 846
Query: 812 MRGSERCL-VIEGNVIVAKNPCLHPGDVRVLRAVNIPRLYHMVDCVVFPQKGSRPHPNEC 871
+ ++ L V++G V +AKNPCLHPGDVR+L AV++P+L+HM DC++FPQKG RPH NE
Sbjct: 847 FKETKTDLEVVKGYVAIAKNPCLHPGDVRILEAVDVPQLHHMYDCLIFPQKGDRPHTNEA 906
Query: 872 SGSDLDGDIYFVCWDTELIPP-RQVLP-MDYTPAPPIQLDRDVRIEDVQEYFVNYMVNDS 931
SGSDLDGD+YFV WD +LIPP R+ P M Y A L R V +D+ ++F + N+
Sbjct: 907 SGSDLDGDLYFVAWDQKLIPPNRKSYPAMHYDAAEEKSLGRAVNHQDIIDFFARNLANEQ 966
Query: 932 LGIIANAHTAFADKESFKARSSPCLELAKLFSIAVDFPKTGVPAIIPSHLNVKEFPDFME 991
LG I NAH AD+ + A CL LA+L + AVDFPKTG +P HL K +PDFM
Sbjct: 967 LGTICNAHVVHADRSEYGAMDEECLLLAELAATAVDFPKTGKIVSMPFHLKPKLYPDFMG 1026
Query: 992 KPDRPSYESKNVIGKLFRAVKDIAPTVSYIRS-FTRDVAMQCYDFDMEVEGFEDYVEDAF 1051
K D +Y+S ++G+L+R VK++ + S + D + YD +E+ GFED + +A+
Sbjct: 1027 KEDYQTYKSNKILGRLYRRVKEVYDEDAEASSEESTDPSAIPYDAVLEIPGFEDLIPEAW 1086
Query: 1052 YHKNNYDYKLGNLLDYYGIKSEAEILSGSIMRMSKSFTRRRD--AEAINLAVRSLRKEAR 1111
HK YD +L LL Y ++ E EI++G I M K ++++ E + + SL+KE R
Sbjct: 1087 GHKCLYDGQLIGLLGQYKVQKEEEIVTGHIWSMPKYTSKKQGELKERLKHSYNSLKKEFR 1146
Query: 1112 TWFNAKESGPDSGSDD-----LFAKASAWYHVTYHHSYWGCYNEGTKRDH-----YLSFP 1116
F ++ S++ KASAWYHVTYH + E D LSF
Sbjct: 1147 KVFEETIPDHENLSEEEKNILYEKKASAWYHVTYHPEWVKKSLELQDPDESSHAAMLSFA 1178
BLAST of Tan0001219 vs. TAIR 10
Match:
AT2G19910.1 (RNA-dependent RNA polymerase family protein )
HSP 1 Score: 124.4 bits (311), Expect = 5.8e-28
Identity = 147/609 (24.14%), Postives = 241/609 (39.57%), Query Frame = 0
Query: 432 DIYSRILSVLRNGIVIGAKNFEFLAFSSSQLR------------------DNSLWMFASR 491
D+YS + +NGI++G + + F F D++ +
Sbjct: 266 DLYSTYKGIAKNGIMVGLRRYRFFVFKDGGKEEKKKDVSTKGVKCYFIRTDSTASIDMQN 325
Query: 492 PGLDAA-AIREWMGDFRHIKNPA---KYAARLGQSFGSSTETLSV--ARHEREIIPDIEV 551
P + A ++ E F H+ + Y +R S T+TL V E I DI
Sbjct: 326 PYIFAGKSMHEARMHFMHVNTLSSLPNYMSRFSLIL-SKTKTLEVDMTGITFEQIDDIHC 385
Query: 552 QHGEVKYVF---------SDGIGKISSDFAK---------------RVAAK--------- 611
+ K V SDG G IS D A+ + +K
Sbjct: 386 HDQDDKDVLDKNGKPCIHSDGTGYISEDLARMCPVNIFKGKSMRSNNIQSKNLNFEGQGP 445
Query: 612 CSLQAFTPSAFQIRYGGY--KGVVAVD-PLSSIKLSLRNSMCKFESDNTKLDVLGYSKYQ 671
C + F+I Y GY KG + L + +R SM K D T ++ ++ +
Sbjct: 446 CGQEPPLLIQFRIFYNGYAVKGTFLTNKKLPPRTVQVRPSMIKVYEDRTLSNLSTFNSLE 505
Query: 672 ---------PCFLNRQVITLLSTLGVKDEVFEKKQREAVEQLDAILTDPLRAQEALELMS 731
L+R ++ LLS GV ++ F R +E+ I A +A
Sbjct: 506 VVTTSNPPRKARLSRNLVALLSYGGVPNDFFLNILRNTLEESKTIFYSERAAFKAAINYG 565
Query: 732 PGENTNILKEMLKCGYKPDIEPYLSMMLQTFRASKLLELRTKSRIFIPDGRAVMGCLDET 791
+ T +M+ G D EPYL L ++ L+ R I + +MG +D T
Sbjct: 566 DDQYT---ADMILVGIPLD-EPYLKDRLSYLLKTERNALKA-GRFPIDESYYIMGTVDPT 625
Query: 792 GTLEYGQVFVQISSARHRNLSDTFAFNMRGSERCLVIEGNVIVAKNPCLHPGDVRVLRAV 851
G L+ ++ V + S + I G+V+V +NP LH GD+ VL+A
Sbjct: 626 GELKENEICVILHSGQ--------------------ISGDVLVYRNPGLHFGDIHVLKAT 685
Query: 852 NIPRLYHMVD----CVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELI---PPRQVLPM 911
+ L V V FPQKG R +E +G D DGD+YF+ + +L+ P +
Sbjct: 686 YVKALEDYVGNAKFAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPKLLEHFKPSEPWVS 745
Query: 912 DYTPA------PPIQLDRDVRIEDVQEYFV--NYMVNDSLGIIANAHTAFAD-------- 947
P+ P +L + E++ + F+ + D +G+ A+ D
Sbjct: 746 SSKPSKIYCGRKPSELSEEELEEELFKMFLKARFCKRDVIGMAADCWLGIMDPFLTLGDE 805
BLAST of Tan0001219 vs. TAIR 10
Match:
AT2G19930.1 (RNA-dependent RNA polymerase family protein )
HSP 1 Score: 114.4 bits (285), Expect = 6.0e-25
Identity = 121/468 (25.85%), Postives = 203/468 (43.38%), Query Frame = 0
Query: 535 VFSDGIGKISSDFAKR-----VAAKCSLQAFTPSA----------FQIRYGGY--KG--- 594
+ SDG G IS D A+ KC A F++ Y GY KG
Sbjct: 397 IHSDGTGYISEDLARMCPLNIFKGKCLRSESIQEACYQDPPLLIQFRMFYDGYAVKGTFL 456
Query: 595 --------VVAVDPLSSIKLSLRNSMCKFESDNTKLDVLGYSKYQPCFLNRQVITLLSTL 654
V V P S IK+S S+ F + N V + + L++ ++ LLS
Sbjct: 457 LNKKLCPRTVQVRP-SMIKVSKDPSLSNFSTFNALEVVTTSNPPKRTKLSKNLVALLSYG 516
Query: 655 GVKDEVFEKKQREAVEQLDAILTDPLRAQEALELMSPGENTNILKEMLKCGY---KPDIE 714
G+ +E F +E+ +I + A A ++ N +M+ G +P ++
Sbjct: 517 GIPNEFFLDILLNTLEESKSIFYNKRAALNAALNYGEMDDQN-AAQMILVGIPLDEPHLK 576
Query: 715 PYLSMMLQTFRASKLLELRTKSRIFIPDGRAVMGCLDETGTLEYGQVFVQISSARHRNLS 774
YLS++L+T + +L+ ++ + + +MG +D TG L+ +V V + S +
Sbjct: 577 NYLSILLKTEKN----DLKA-GKLPVTESYYLMGTVDPTGALKEDEVCVILESGQ----- 636
Query: 775 DTFAFNMRGSERCLVIEGNVIVAKNPCLHPGDVRVLRAVNIPRLYHMVD----CVVFPQK 834
I G V+V +NP LH GD+ +L+A + L V V FPQK
Sbjct: 637 ---------------ISGEVLVYRNPGLHFGDIHILKATYVKALEEYVGNSKFAVFFPQK 696
Query: 835 GSRPHPNECSGSDLDGDIYFVCWDTELI-------PPRQVLPMDYTPA--PPIQLDRDVR 894
G R +E +G D DGD+YF+ + EL+ P + P + + P QL +
Sbjct: 697 GPRSLGDEIAGGDFDGDMYFISRNPELLENFKPSEPWVSLTPPSKSNSGRAPSQLSPEEL 756
Query: 895 IEDVQEYFV--NYMVNDSLGIIANAHTAFADK---------ESFKARSSPCLELAKLFSI 948
E++ E F+ + ++ +GI A++ D+ E LEL ++
Sbjct: 757 EEELFEMFLTAGFHASNVIGIAADSWLTIMDRFLILGDDRAEEKAEMKKKMLELIDIYYD 816
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9LQV2 | 0.0e+00 | 63.64 | RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=RDR1 PE=2 SV=1 | [more] |
Q0DXS3 | 3.8e-282 | 65.94 | Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica OX=39947... | [more] |
O82504 | 1.7e-218 | 39.72 | RNA-dependent RNA polymerase 2 OS=Arabidopsis thaliana OX=3702 GN=RDR2 PE=1 SV=1 | [more] |
Q7XM31 | 8.9e-215 | 39.17 | Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica OX=39947... | [more] |
Q9SG02 | 1.2e-166 | 36.39 | RNA-dependent RNA polymerase 6 OS=Arabidopsis thaliana OX=3702 GN=RDR6 PE=1 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KAG6599933.1 | 0.0e+00 | 88.69 | RNA-dependent RNA polymerase 1, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
XP_022943173.1 | 0.0e+00 | 88.69 | RNA-dependent RNA polymerase 1-like isoform X2 [Cucurbita moschata] >XP_02294317... | [more] |
XP_022943172.1 | 0.0e+00 | 88.69 | RNA-dependent RNA polymerase 1-like isoform X1 [Cucurbita moschata] | [more] |
XP_022994928.1 | 0.0e+00 | 88.78 | probable RNA-dependent RNA polymerase 1 isoform X2 [Cucurbita maxima] >XP_022994... | [more] |
XP_022994920.1 | 0.0e+00 | 88.78 | probable RNA-dependent RNA polymerase 1 isoform X1 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FXH5 | 0.0e+00 | 88.69 | RNA-dependent RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111447985 PE=3 ... | [more] |
A0A6J1FSA2 | 0.0e+00 | 88.69 | RNA-dependent RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111447985 PE=3 ... | [more] |
A0A6J1K2P9 | 0.0e+00 | 88.78 | RNA-dependent RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111490498 PE=3 SV... | [more] |
A0A6J1K2N6 | 0.0e+00 | 88.78 | RNA-dependent RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111490498 PE=3 SV... | [more] |
A0A1S3CPY1 | 0.0e+00 | 85.53 | RNA-dependent RNA polymerase OS=Cucumis melo OX=3656 GN=LOC103502906 PE=3 SV=1 | [more] |