Tan0000950 (gene) Snake gourd v1

Overview


Name	Tan0000950
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Pentatricopeptide repeat-containing protein
Location	LG08: 1811976 .. 1812322 (+)
RNA-Seq Expression	Tan0000950
Synteny	Tan0000950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTAGATGACATGATTCGTAAGTTGAAGGAAGCAGGCTACATTCCTGAGAAATCAGAAGTCCTGTTTGACATGGATGAAGAAGAAAAAGAGACTGCTCTTAGCCTTCACAGTGAAAAACTAGCTATTGCATTTGGACTTATTAGCACAAAACCTGGGACACCAATACGGATTGTGAAAAATCTTCGTGTTTGCACTGATTGCCACACTGCTACTAAGATCATCTCAAAGGTTTACAAAAGAGAAGTAGTTGTAAGAGACCGCAATAGGTTTCACCATTTTAAGGATGGGAGTTGTTCTTGTGGAGATTTCTGGTGATTATTCATAAATATCAACAGAAGTTCTAA

mRNA sequence

ATGCTAGATGACATGATTCGTAAGTTGAAGGAAGCAGGCTACATTCCTGAGAAATCAGAAGTCCTGTTTGACATGGATGAAGAAGAAAAAGAGACTGCTCTTAGCCTTCACAGTGAAAAACTAGCTATTGCATTTGGACTTATTAGCACAAAACCTGGGACACCAATACGGATTGTGAAAAATCTTCGTGTTTGCACTGATTGCCACACTGCTACTAAGATCATCTCAAAGTTGTTCTTGTGGAGATTTCTGGTGATTATTCATAAATATCAACAGAAGTTCTAA

Coding sequence (CDS)

ATGCTAGATGACATGATTCGTAAGTTGAAGGAAGCAGGCTACATTCCTGAGAAATCAGAAGTCCTGTTTGACATGGATGAAGAAGAAAAAGAGACTGCTCTTAGCCTTCACAGTGAAAAACTAGCTATTGCATTTGGACTTATTAGCACAAAACCTGGGACACCAATACGGATTGTGAAAAATCTTCGTGTTTGCACTGATTGCCACACTGCTACTAAGATCATCTCAAAGTTGTTCTTGTGGAGATTTCTGGTGATTATTCATAAATATCAACAGAAGTTCTAA

Protein sequence

MLDDMIRKLKEAGYIPEKSEVLFDMDEEEKETALSLHSEKLAIAFGLISTKPGTPIRIVKNLRVCTDCHTATKIISKLFLWRFLVIIHKYQQKF

Homology

[Close]

BLAST of Tan0000950 vs. ExPASy Swiss-Prot
Match: Q683I9 (Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H82 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.3e-23
Identity = 49/79 (62.03%), Postives = 67/79 (84.81%), Query Frame = 0


Query: 1   MLDDMIRKLKEAGYIPEKSEVLFDMDEEEKETALSLHSEKLAIAFGLISTKPGTPIRIVK 60
           MLD+++++L+EAGY+ +  EVL D++E++KE ALS HSEKLAIAF L+ T+PGTP+RI+K
Sbjct: 469 MLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIK 528

Query: 61  NLRVCTDCHTATKIISKLF 80
           NLR+C DCH   K+ISKLF
Sbjct: 529 NLRICGDCHLVMKMISKLF 547

[Close]

BLAST of Tan0000950 vs. ExPASy Swiss-Prot
Match: Q9SMZ2 (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H53 PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 3.3e-22
Identity = 48/76 (63.16%), Postives = 60/76 (78.95%), Query Frame = 0


Query: 4   DMIRKLKEAGYIPEKSEVLFDMDEEEKETALSLHSEKLAIAFGLISTKPGTPIRIVKNLR 63
           DMIR +K+ GY+PE    L D++EEEKE AL  HSEKLA+AFGL+ST P TPIR++KNLR
Sbjct: 889 DMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLR 948

Query: 64  VCTDCHTATKIISKLF 80
           VC DCH A K I+K++
Sbjct: 949 VCGDCHNAMKYIAKVY 964

[Close]

BLAST of Tan0000950 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 4.3e-22
Identity = 52/79 (65.82%), Postives = 66/79 (83.54%), Query Frame = 0


Query: 1   MLDDMIRKLKEAGYIPEKSEVLFDMDEEEKETALSLHSEKLAIAFGLISTKPGTPIRIVK 60
           ML++M   L++AG++P+ SEVL +M+EE KE AL  HSEKLAIAFGLISTKPGT + IVK
Sbjct: 637 MLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVK 696

Query: 61  NLRVCTDCHTATKIISKLF 80
           NLRVC +CH ATK+ISK++
Sbjct: 697 NLRVCRNCHEATKLISKIY 715

[Close]

BLAST of Tan0000950 vs. ExPASy Swiss-Prot
Match: Q9SZT8 (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ELI1 PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 2.8e-21
Identity = 46/78 (58.97%), Postives = 63/78 (80.77%), Query Frame = 0


Query: 1   MLDDMIRKLKEAGYIPEKSEVLFDMDEEEKETALSLHSEKLAIAFGLISTKPGTPIRIVK 60
           ML  +  ++K  GY+P  + VL D++E EKE +L +HSE+LAIA+GLISTKPG+P++I K
Sbjct: 528 MLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFK 587

Query: 61  NLRVCTDCHTATKIISKL 79
           NLRVC+DCHT TK+ISK+
Sbjct: 588 NLRVCSDCHTVTKLISKI 605

[Close]

BLAST of Tan0000950 vs. ExPASy Swiss-Prot
Match: Q9SUH6 (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX=3702 GN=DYW9 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 4.7e-21
Identity = 47/77 (61.04%), Postives = 62/77 (80.52%), Query Frame = 0


Query: 2   LDDMIRKLKEAGYIPEKSEVLFDMDEEEKETALSLHSEKLAIAFGLISTKPGTPIRIVKN 61
           L+ +  K++EAGY PE    L D++EEE+E  + +HSE+LAIAFGLI+T+PGT IRI+KN
Sbjct: 689 LEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKN 748

Query: 62  LRVCTDCHTATKIISKL 79
           LRVC DCHT TK+ISK+
Sbjct: 749 LRVCLDCHTVTKLISKI 765

[Close]

BLAST of Tan0000950 vs. NCBI nr
Match: XP_024182101.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic [Rosa chinensis] >PRQ46486.1 putative tetratricopeptide-like helical domain, DYW domain-containing protein [Rosa chinensis])

HSP 1 Score: 142.5 bits (358), Expect = 1.8e-30
Identity = 67/79 (84.81%), Postives = 77/79 (97.47%), Query Frame = 0


Query: 1   MLDDMIRKLKEAGYIPEKSEVLFDMDEEEKETALSLHSEKLAIAFGLISTKPGTPIRIVK 60
           ML+DMI +LK+AGY+P+KSEVLFDMDEEEKETALSLHSEKLAIAFGLIST PGTPIR+VK
Sbjct: 612 MLEDMISRLKKAGYVPQKSEVLFDMDEEEKETALSLHSEKLAIAFGLISTNPGTPIRVVK 671

Query: 61  NLRVCTDCHTATKIISKLF 80
           NLRVC+DCHTATK+ISK++
Sbjct: 672 NLRVCSDCHTATKLISKVY 690

[Close]

BLAST of Tan0000950 vs. NCBI nr
Match: PQQ20230.1 (pentatricopeptide repeat-containing protein [Prunus yedoensis var. nudiflora])

HSP 1 Score: 137.1 bits (344), Expect = 7.7e-29
Identity = 66/79 (83.54%), Postives = 74/79 (93.67%), Query Frame = 0


Query: 1   MLDDMIRKLKEAGYIPEKSEVLFDMDEEEKETALSLHSEKLAIAFGLISTKPGTPIRIVK 60
           ML DMI +LK+AGY+PEKSEVL D+DEEEKETALSLHSEKLAIAFGLIST PGT IR+VK
Sbjct: 309 MLQDMIERLKKAGYVPEKSEVLLDIDEEEKETALSLHSEKLAIAFGLISTNPGTTIRVVK 368

Query: 61  NLRVCTDCHTATKIISKLF 80
           NLRVC+DCHTATKIISK++
Sbjct: 369 NLRVCSDCHTATKIISKVY 387

[Close]

BLAST of Tan0000950 vs. NCBI nr
Match: XP_021817716.1 (pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like isoform X1 [Prunus avium] >XP_021817717.1 pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like isoform X2 [Prunus avium])

HSP 1 Score: 137.1 bits (344), Expect = 7.7e-29
Identity = 66/79 (83.54%), Postives = 74/79 (93.67%), Query Frame = 0


Query: 1   MLDDMIRKLKEAGYIPEKSEVLFDMDEEEKETALSLHSEKLAIAFGLISTKPGTPIRIVK 60
           ML DMI +LK+AGY+PEKSEVL D+DEEEKETALSLHSEKLAIAFGLIST PGT IR+VK
Sbjct: 618 MLQDMIERLKKAGYVPEKSEVLLDIDEEEKETALSLHSEKLAIAFGLISTNPGTTIRVVK 677

Query: 61  NLRVCTDCHTATKIISKLF 80
           NLRVC+DCHTATKIISK++
Sbjct: 678 NLRVCSDCHTATKIISKVY 696

[Close]

BLAST of Tan0000950 vs. NCBI nr
Match: XP_034225178.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Prunus dulcis] >XP_034225201.1 pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Prunus dulcis] >VVA10669.1 PREDICTED: pentatricopeptide [Prunus dulcis] >VVA41861.1 PREDICTED: pentatricopeptide [Prunus dulcis])

HSP 1 Score: 137.1 bits (344), Expect = 7.7e-29
Identity = 66/79 (83.54%), Postives = 74/79 (93.67%), Query Frame = 0


Query: 1   MLDDMIRKLKEAGYIPEKSEVLFDMDEEEKETALSLHSEKLAIAFGLISTKPGTPIRIVK 60
           ML DMI +LK+AGY+PEKSEVL D+DEEEKETALSLHSEKLAIAFGLIST PGT IR+VK
Sbjct: 618 MLQDMIERLKKAGYVPEKSEVLLDIDEEEKETALSLHSEKLAIAFGLISTNPGTTIRVVK 677

Query: 61  NLRVCTDCHTATKIISKLF 80
           NLRVC+DCHTATKIISK++
Sbjct: 678 NLRVCSDCHTATKIISKVY 696

[Close]

BLAST of Tan0000950 vs. NCBI nr
Match: XP_007203470.1 (pentatricopeptide repeat-containing protein At1g08070, chloroplastic [Prunus persica] >ONH98216.1 hypothetical protein PRUPE_7G236200 [Prunus persica])

HSP 1 Score: 137.1 bits (344), Expect = 7.7e-29
Identity = 66/79 (83.54%), Postives = 74/79 (93.67%), Query Frame = 0


Query: 1   MLDDMIRKLKEAGYIPEKSEVLFDMDEEEKETALSLHSEKLAIAFGLISTKPGTPIRIVK 60
           ML DMI +LK+AGY+PEKSEVL D+DEEEKETALSLHSEKLAIAFGLIST PGT IR+VK
Sbjct: 618 MLQDMIERLKKAGYVPEKSEVLLDIDEEEKETALSLHSEKLAIAFGLISTNPGTTIRVVK 677

Query: 61  NLRVCTDCHTATKIISKLF 80
           NLRVC+DCHTATKIISK++
Sbjct: 678 NLRVCSDCHTATKIISKVY 696

[Close]

BLAST of Tan0000950 vs. ExPASy TrEMBL
Match: A0A2P6RJ71 (Putative tetratricopeptide-like helical domain, DYW domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0089561 PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 8.9e-31
Identity = 67/79 (84.81%), Postives = 77/79 (97.47%), Query Frame = 0


Query: 1   MLDDMIRKLKEAGYIPEKSEVLFDMDEEEKETALSLHSEKLAIAFGLISTKPGTPIRIVK 60
           ML+DMI +LK+AGY+P+KSEVLFDMDEEEKETALSLHSEKLAIAFGLIST PGTPIR+VK
Sbjct: 612 MLEDMISRLKKAGYVPQKSEVLFDMDEEEKETALSLHSEKLAIAFGLISTNPGTPIRVVK 671

Query: 61  NLRVCTDCHTATKIISKLF 80
           NLRVC+DCHTATK+ISK++
Sbjct: 672 NLRVCSDCHTATKLISKVY 690

[Close]

BLAST of Tan0000950 vs. ExPASy TrEMBL
Match: M5VTK1 (DYW_deaminase domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_7G236200 PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.7e-29
Identity = 66/79 (83.54%), Postives = 74/79 (93.67%), Query Frame = 0


Query: 1   MLDDMIRKLKEAGYIPEKSEVLFDMDEEEKETALSLHSEKLAIAFGLISTKPGTPIRIVK 60
           ML DMI +LK+AGY+PEKSEVL D+DEEEKETALSLHSEKLAIAFGLIST PGT IR+VK
Sbjct: 618 MLQDMIERLKKAGYVPEKSEVLLDIDEEEKETALSLHSEKLAIAFGLISTNPGTTIRVVK 677

Query: 61  NLRVCTDCHTATKIISKLF 80
           NLRVC+DCHTATKIISK++
Sbjct: 678 NLRVCSDCHTATKIISKVY 696

[Close]

BLAST of Tan0000950 vs. ExPASy TrEMBL
Match: A0A5E4GQU3 (PREDICTED: pentatricopeptide OS=Prunus dulcis OX=3755 GN=ALMOND_2B006710 PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.7e-29
Identity = 66/79 (83.54%), Postives = 74/79 (93.67%), Query Frame = 0


Query: 1   MLDDMIRKLKEAGYIPEKSEVLFDMDEEEKETALSLHSEKLAIAFGLISTKPGTPIRIVK 60
           ML DMI +LK+AGY+PEKSEVL D+DEEEKETALSLHSEKLAIAFGLIST PGT IR+VK
Sbjct: 618 MLQDMIERLKKAGYVPEKSEVLLDIDEEEKETALSLHSEKLAIAFGLISTNPGTTIRVVK 677

Query: 61  NLRVCTDCHTATKIISKLF 80
           NLRVC+DCHTATKIISK++
Sbjct: 678 NLRVCSDCHTATKIISKVY 696

[Close]

BLAST of Tan0000950 vs. ExPASy TrEMBL
Match: A0A6P5SU63 (pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like isoform X1 OS=Prunus avium OX=42229 GN=LOC110759883 PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.7e-29
Identity = 66/79 (83.54%), Postives = 74/79 (93.67%), Query Frame = 0


Query: 1   MLDDMIRKLKEAGYIPEKSEVLFDMDEEEKETALSLHSEKLAIAFGLISTKPGTPIRIVK 60
           ML DMI +LK+AGY+PEKSEVL D+DEEEKETALSLHSEKLAIAFGLIST PGT IR+VK
Sbjct: 618 MLQDMIERLKKAGYVPEKSEVLLDIDEEEKETALSLHSEKLAIAFGLISTNPGTTIRVVK 677

Query: 61  NLRVCTDCHTATKIISKLF 80
           NLRVC+DCHTATKIISK++
Sbjct: 678 NLRVCSDCHTATKIISKVY 696

[Close]

BLAST of Tan0000950 vs. ExPASy TrEMBL
Match: A0A314ZNK1 (Pentatricopeptide repeat-containing protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_15876 PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.7e-29
Identity = 66/79 (83.54%), Postives = 74/79 (93.67%), Query Frame = 0


Query: 1   MLDDMIRKLKEAGYIPEKSEVLFDMDEEEKETALSLHSEKLAIAFGLISTKPGTPIRIVK 60
           ML DMI +LK+AGY+PEKSEVL D+DEEEKETALSLHSEKLAIAFGLIST PGT IR+VK
Sbjct: 309 MLQDMIERLKKAGYVPEKSEVLLDIDEEEKETALSLHSEKLAIAFGLISTNPGTTIRVVK 368

Query: 61  NLRVCTDCHTATKIISKLF 80
           NLRVC+DCHTATKIISK++
Sbjct: 369 NLRVCSDCHTATKIISKVY 387

[Close]

BLAST of Tan0000950 vs. TAIR 10
Match: AT3G62890.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 110.2 bits (274), Expect = 9.4e-25
Identity = 49/79 (62.03%), Postives = 67/79 (84.81%), Query Frame = 0


Query: 1   MLDDMIRKLKEAGYIPEKSEVLFDMDEEEKETALSLHSEKLAIAFGLISTKPGTPIRIVK 60
           MLD+++++L+EAGY+ +  EVL D++E++KE ALS HSEKLAIAF L+ T+PGTP+RI+K
Sbjct: 469 MLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIK 528

Query: 61  NLRVCTDCHTATKIISKLF 80
           NLR+C DCH   K+ISKLF
Sbjct: 529 NLRICGDCHLVMKMISKLF 547

[Close]

BLAST of Tan0000950 vs. TAIR 10
Match: AT4G33170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 105.5 bits (262), Expect = 2.3e-23
Identity = 48/76 (63.16%), Postives = 60/76 (78.95%), Query Frame = 0


Query: 4   DMIRKLKEAGYIPEKSEVLFDMDEEEKETALSLHSEKLAIAFGLISTKPGTPIRIVKNLR 63
           DMIR +K+ GY+PE    L D++EEEKE AL  HSEKLA+AFGL+ST P TPIR++KNLR
Sbjct: 889 DMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLR 948

Query: 64  VCTDCHTATKIISKLF 80
           VC DCH A K I+K++
Sbjct: 949 VCGDCHNAMKYIAKVY 964

[Close]

BLAST of Tan0000950 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 105.1 bits (261), Expect = 3.0e-23
Identity = 52/79 (65.82%), Postives = 66/79 (83.54%), Query Frame = 0


Query: 1   MLDDMIRKLKEAGYIPEKSEVLFDMDEEEKETALSLHSEKLAIAFGLISTKPGTPIRIVK 60
           ML++M   L++AG++P+ SEVL +M+EE KE AL  HSEKLAIAFGLISTKPGT + IVK
Sbjct: 637 MLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVK 696

Query: 61  NLRVCTDCHTATKIISKLF 80
           NLRVC +CH ATK+ISK++
Sbjct: 697 NLRVCRNCHEATKLISKIY 715

[Close]

BLAST of Tan0000950 vs. TAIR 10
Match: AT4G37380.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 102.4 bits (254), Expect = 2.0e-22
Identity = 46/78 (58.97%), Postives = 63/78 (80.77%), Query Frame = 0


Query: 1   MLDDMIRKLKEAGYIPEKSEVLFDMDEEEKETALSLHSEKLAIAFGLISTKPGTPIRIVK 60
           ML  +  ++K  GY+P  + VL D++E EKE +L +HSE+LAIA+GLISTKPG+P++I K
Sbjct: 528 MLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFK 587

Query: 61  NLRVCTDCHTATKIISKL 79
           NLRVC+DCHT TK+ISK+
Sbjct: 588 NLRVCSDCHTVTKLISKI 605

[Close]

BLAST of Tan0000950 vs. TAIR 10
Match: AT4G30700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 101.7 bits (252), Expect = 3.4e-22
Identity = 47/77 (61.04%), Postives = 62/77 (80.52%), Query Frame = 0


Query: 2   LDDMIRKLKEAGYIPEKSEVLFDMDEEEKETALSLHSEKLAIAFGLISTKPGTPIRIVKN 61
           L+ +  K++EAGY PE    L D++EEE+E  + +HSE+LAIAFGLI+T+PGT IRI+KN
Sbjct: 689 LEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKN 748

Query: 62  LRVCTDCHTATKIISKL 79
           LRVC DCHT TK+ISK+
Sbjct: 749 LRVCLDCHTVTKLISKI 765

The following BLAST results are available for this feature:

BLAST of Tan0000950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q683I9	1.3e-23	62.03	Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana OX...	[more]
Q9SMZ2	3.3e-22	63.16	Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX...	[more]
Q9LN01	4.3e-22	65.82	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
Q9SZT8	2.8e-21	58.97	Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis t...	[more]
Q9SUH6	4.7e-21	61.04	Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX...	[more]

BLAST of Tan0000950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_024182101.1	1.8e-30	84.81	pentatricopeptide repeat-containing protein At1g08070, chloroplastic [Rosa chine...	[more]
PQQ20230.1	7.7e-29	83.54	pentatricopeptide repeat-containing protein [Prunus yedoensis var. nudiflora]	[more]
XP_021817716.1	7.7e-29	83.54	pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like isofor...	[more]
XP_034225178.1	7.7e-29	83.54	pentatricopeptide repeat-containing protein At1g08070, chloroplastic-like [Prunu...	[more]
XP_007203470.1	7.7e-29	83.54	pentatricopeptide repeat-containing protein At1g08070, chloroplastic [Prunus per...	[more]

BLAST of Tan0000950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P6RJ71	8.9e-31	84.81	Putative tetratricopeptide-like helical domain, DYW domain-containing protein OS...	[more]
M5VTK1	3.7e-29	83.54	DYW_deaminase domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_7G236...	[more]
A0A5E4GQU3	3.7e-29	83.54	PREDICTED: pentatricopeptide OS=Prunus dulcis OX=3755 GN=ALMOND_2B006710 PE=3 SV...	[more]
A0A6P5SU63	3.7e-29	83.54	pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like isofor...	[more]
A0A314ZNK1	3.7e-29	83.54	Pentatricopeptide repeat-containing protein OS=Prunus yedoensis var. nudiflora O...	[more]

BLAST of Tan0000950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62890.1	9.4e-25	62.03	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G33170.1	2.3e-23	63.16	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G08070.1	3.0e-23	65.82	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G37380.1	2.0e-22	58.97	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G30700.1	3.4e-22	61.04	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 2..79 e-value: 3.0E-25 score: 88.5
None	No IPR available	PANTHER	PTHR47926:SF236	SUBFAMILY NOT NAMED	coord: 2..82
None	No IPR available	PANTHER	PTHR47926	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 2..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0000950.1	Tan0000950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding