
Tan0000816 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGATTACAAGAAACTGGTTTAGAAGAGCTCGAAGGAAGTTGAGTAGAAAAGGCAACAGAGACATTGTTTTTCTGCAGACAAATCTCAGCCCAACGCATGATGATGAAGAAGAAACCAATCTTACATTAGCACAAAATCAACAAGAAGATGAAGAAGAAGAAGATGATGTCGAAATTGCCAATGACTCAATTGTTCCAAGTTTTCAAAAGAAAGTTTTGACTTTAGAGGAAGTGGCAGCCATCAAAATCCAAGCTTGTTTCAGAGGCCATCTTGTATTATATCTTTACCTTAACATTTTACTTCCCTTTTTACTGTTTTGCATTCCAAGCTTGTTTCAGAGATGACTTTTGAGAGAGTGCAAAGTGCTTTTAACCCATTAAAAGTATTTCTAATAAATTTCATGATTTCTGTTCGAATATGAAGAATGATTTTCAAATTTTTAAAAATAGTATAAAAAGCACTTAAAGTGCTTTGAGGAGAAGTGCTTGCTTAATGCTTTTTCCAAGGGTGCTTAGGAAAAAAAATTTATTTTTGCTTAAAAGCATTTTTTTTCAGAAGTCGTCGATCTCAAAGTTCAAACTAACCTTAAAACGCCATTATTTCAACATTTTTGAGTGTGTATGGCTTCTTAATTCTAGTTTGATATTAGTTTGATCAACAAGCTAATGTATATAAGAAAAATGGGTAGAAATTGACATTGTGAGTATTTAAATGTTGGTCTTTTACTAGATTACTAGATAACTGATAGACTCAAAAGCGTCAATTACAGAAAATTTGAATAGCAATTAGGATTTTATAATTGAATGATTGTCTCAACACGTACATTTGTTCTTCAGGCAAGACGAGCATTTCGAGCACTAAGAAGCTTGGTGAAGCTGCAAGCGCTGGCTCGAGGAGTGTGCGCGAGGAGGCAGGCACGCATAGCTCTTCAGTTCATGCATGCATTAGTTCGATTGCAGGTTCGGGTTCGCGCTCGCCAGCTTCTGAACAGATACAGTGAAGAGTCTGATTGTTGA ATGGGGATTACAAGAAACTGGTTTAGAAGAGCTCGAAGGAAGTTGAGTAGAAAAGGCAACAGAGACATTGTTTTTCTGCAGACAAATCTCAGCCCAACGCATGATGATGAAGAAGAAACCAATCTTACATTAGCACAAAATCAACAAGAAGATGAAGAAGAAGAAGATGATGTCGAAATTGCCAATGACTCAATTGTTCCAAGTTTTCAAAAGAAAGTTTTGACTTTAGAGGAAGTGGCAGCCATCAAAATCCAAGCTTGTTTCAGAGGCCATCTTGCAAGACGAGCATTTCGAGCACTAAGAAGCTTGGTGAAGCTGCAAGCGCTGGCTCGAGGAGTGTGCGCGAGGAGGCAGGCACGCATAGCTCTTCAGTTCATGCATGCATTAGTTCGATTGCAGGTTCGGGTTCGCGCTCGCCAGCTTCTGAACAGATACAGTGAAGAGTCTGATTGTTGA ATGGGGATTACAAGAAACTGGTTTAGAAGAGCTCGAAGGAAGTTGAGTAGAAAAGGCAACAGAGACATTGTTTTTCTGCAGACAAATCTCAGCCCAACGCATGATGATGAAGAAGAAACCAATCTTACATTAGCACAAAATCAACAAGAAGATGAAGAAGAAGAAGATGATGTCGAAATTGCCAATGACTCAATTGTTCCAAGTTTTCAAAAGAAAGTTTTGACTTTAGAGGAAGTGGCAGCCATCAAAATCCAAGCTTGTTTCAGAGGCCATCTTGCAAGACGAGCATTTCGAGCACTAAGAAGCTTGGTGAAGCTGCAAGCGCTGGCTCGAGGAGTGTGCGCGAGGAGGCAGGCACGCATAGCTCTTCAGTTCATGCATGCATTAGTTCGATTGCAGGTTCGGGTTCGCGCTCGCCAGCTTCTGAACAGATACAGTGAAGAGTCTGATTGTTGA MGITRNWFRRARRKLSRKGNRDIVFLQTNLSPTHDDEEETNLTLAQNQQEDEEEEDDVEIANDSIVPSFQKKVLTLEEVAAIKIQACFRGHLARRAFRALRSLVKLQALARGVCARRQARIALQFMHALVRLQVRVRARQLLNRYSEESDC Homology
BLAST of Tan0000816 vs. ExPASy Swiss-Prot
Match: Q9SD11 (Protein IQ-DOMAIN 20 OS=Arabidopsis thaliana OX=3702 GN=IQD20 PE=1 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 1.7e-20 Identity = 56/69 (81.16%), Postives = 62/69 (89.86%), Query Frame = 0
BLAST of Tan0000816 vs. ExPASy Swiss-Prot
Match: Q9FT53 (Protein IQ-DOMAIN 3 OS=Arabidopsis thaliana OX=3702 GN=IQD3 PE=1 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 3.8e-12 Identity = 45/90 (50.00%), Postives = 61/90 (67.78%), Query Frame = 0
BLAST of Tan0000816 vs. ExPASy Swiss-Prot
Match: A0A1P8B590 (Protein IQ-DOMAIN 19 OS=Arabidopsis thaliana OX=3702 GN=IQD19 PE=1 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.4e-11 Identity = 38/66 (57.58%), Postives = 49/66 (74.24%), Query Frame = 0
BLAST of Tan0000816 vs. ExPASy Swiss-Prot
Match: O64852 (Protein IQ-DOMAIN 6 OS=Arabidopsis thaliana OX=3702 GN=IQD6 PE=1 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 3.2e-11 Identity = 40/65 (61.54%), Postives = 50/65 (76.92%), Query Frame = 0
BLAST of Tan0000816 vs. ExPASy Swiss-Prot
Match: F4J061 (Protein IQ-DOMAIN 5 OS=Arabidopsis thaliana OX=3702 GN=IQD5 PE=1 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.6e-10 Identity = 40/74 (54.05%), Postives = 51/74 (68.92%), Query Frame = 0
BLAST of Tan0000816 vs. NCBI nr
Match: KAG6577802.1 (Protein IQ-DOMAIN 20, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015841.1 Protein IQ-DOMAIN 31, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 231.9 bits (590), Expect = 3.7e-57 Identity = 131/156 (83.97%), Postives = 138/156 (88.46%), Query Frame = 0
BLAST of Tan0000816 vs. NCBI nr
Match: XP_022923472.1 (protein IQ-DOMAIN 31-like [Cucurbita moschata]) HSP 1 Score: 229.2 bits (583), Expect = 2.4e-56 Identity = 130/159 (81.76%), Postives = 138/159 (86.79%), Query Frame = 0
BLAST of Tan0000816 vs. NCBI nr
Match: XP_038904192.1 (protein IQ-DOMAIN 31 [Benincasa hispida]) HSP 1 Score: 224.2 bits (570), Expect = 7.7e-55 Identity = 128/153 (83.66%), Postives = 137/153 (89.54%), Query Frame = 0
BLAST of Tan0000816 vs. NCBI nr
Match: XP_004146164.2 (protein IQ-DOMAIN 1 [Cucumis sativus] >KGN55627.1 hypothetical protein Csa_009661 [Cucumis sativus]) HSP 1 Score: 211.1 bits (536), Expect = 6.8e-51 Identity = 125/159 (78.62%), Postives = 133/159 (83.65%), Query Frame = 0
BLAST of Tan0000816 vs. NCBI nr
Match: KAG7027812.1 (Protein IQ-DOMAIN 14, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 203.8 bits (517), Expect = 1.1e-48 Identity = 114/151 (75.50%), Postives = 124/151 (82.12%), Query Frame = 0
BLAST of Tan0000816 vs. ExPASy TrEMBL
Match: A0A6J1E674 (protein IQ-DOMAIN 31-like OS=Cucurbita moschata OX=3662 GN=LOC111431153 PE=4 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 1.2e-56 Identity = 130/159 (81.76%), Postives = 138/159 (86.79%), Query Frame = 0
BLAST of Tan0000816 vs. ExPASy TrEMBL
Match: A0A0A0L4V7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G002470 PE=4 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 3.3e-51 Identity = 125/159 (78.62%), Postives = 133/159 (83.65%), Query Frame = 0
BLAST of Tan0000816 vs. ExPASy TrEMBL
Match: A0A6J1H822 (protein IQ-DOMAIN 1 OS=Cucurbita moschata OX=3662 GN=LOC111460382 PE=4 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 2.2e-47 Identity = 112/151 (74.17%), Postives = 120/151 (79.47%), Query Frame = 0
BLAST of Tan0000816 vs. ExPASy TrEMBL
Match: A0A6J1I877 (protein IQ-DOMAIN 1 OS=Cucurbita maxima OX=3661 GN=LOC111470076 PE=4 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 2.7e-45 Identity = 112/152 (73.68%), Postives = 115/152 (75.66%), Query Frame = 0
BLAST of Tan0000816 vs. ExPASy TrEMBL
Match: A0A6P5T0E7 (uncharacterized protein LOC110761358 OS=Prunus avium OX=42229 GN=LOC110761358 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 1.6e-26 Identity = 82/146 (56.16%), Postives = 98/146 (67.12%), Query Frame = 0
BLAST of Tan0000816 vs. TAIR 10
Match: AT3G51380.1 (IQ-domain 20 ) HSP 1 Score: 100.5 bits (249), Expect = 1.2e-21 Identity = 56/69 (81.16%), Postives = 62/69 (89.86%), Query Frame = 0
BLAST of Tan0000816 vs. TAIR 10
Match: AT3G52290.1 (IQ-domain 3 ) HSP 1 Score: 72.8 bits (177), Expect = 2.7e-13 Identity = 45/90 (50.00%), Postives = 61/90 (67.78%), Query Frame = 0
BLAST of Tan0000816 vs. TAIR 10
Match: AT4G14750.1 (IQ-domain 19 ) HSP 1 Score: 70.1 bits (170), Expect = 1.7e-12 Identity = 38/66 (57.58%), Postives = 49/66 (74.24%), Query Frame = 0
BLAST of Tan0000816 vs. TAIR 10
Match: AT2G26180.1 (IQ-domain 6 ) HSP 1 Score: 69.7 bits (169), Expect = 2.3e-12 Identity = 40/65 (61.54%), Postives = 50/65 (76.92%), Query Frame = 0
BLAST of Tan0000816 vs. TAIR 10
Match: AT3G22190.1 (IQ-domain 5 ) HSP 1 Score: 67.4 bits (163), Expect = 1.1e-11 Identity = 40/74 (54.05%), Postives = 51/74 (68.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|