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Tan0000291 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTAGCTTCCAACACCCAATTCTCCTTTCTTCCTTCCTTCTTCCTTCTCTCTTTCTTTCTCTCTCTCTCTCAGTTTCATTCTCTGTGCAGAAAGCTTTGTTAATGTATTTTAATGGCATCGGTAAGATTCTCTCACTCTTTTTCTCTCTTCTTTCATCTATTCTTCGATCTCTGTTCTGTTTGCATTTTTATGTTTTTGTCGAATCGATTCGATTGAATCATGCCTCTCTTATTCGGAATCGAGCAATTTCAAATCTATGACCTGCCTTCTGTGTGATGGTTTGATATTACAAAATGAATTTGCTCGTATCTAGCGATTTCAAATTCTTGAGACAGTTTTTATGCTTATTGACATTTGCTCGTATCGAATAAGGAATCGGTGTTGAGCATTTCAAATTGTTGGGATTGGTATTTACCTGTATGAAATTTAACTGGCGACAAAACTACTCATTCTTGGATTTGAGTCATTTTTTCATACAAAGTTGTAGAACATTCTTAAAATGCAAAAGAATTTGGCATGAATTTGGAATCTATTGGGTTTTCCCCCTTTTGTGGGAAAAATTATCTATATGAATTGTCTTCCATCGTTTGTTGAGAATCTCACTTTGATAAAGTAGAGAGAAATCTCACAATATATATGATAATATGGGCTACTCCTCTCATAACCAATTGATTTTGAGATGAACCCCATATAATATAATATGGTATCAGAGTCTATCAAACCCAAACAAGTATTCGGTCCAAAAATTGAAATTGGGATCCAATCCAAGAATGGTGGACCCAAAGAGCCACCATCTTGAGGGGGCATGTTGAAGATCTCACATTTGAAAAGTTAAGAGAAACCTGGGCTAATTCTCTCATTGCCAATTGGTTTTGGGATGAAACCTCATATAATCTAATACACTTTTCCCGGCCATGTCTGTCTTGTTTGAGTTTCACATCAGCAGAAACACAATTCATTGCTTTAACAGAAATGCAATGCTAAAAGCAAATACAAGATAGCTATAGAGATCTTCACATAAAAGCAAACCCTTTTGATAGCAATGGAAGAACTGACAAGCATGAGAAATTCACAATTATTGTTATCAATGTAGAAGAAGATCTGAATTCTGATATATATGTTTCTAATGTCTATAGCAGGATAAAGGTCGCCCCTTGCCGAAATTCGGTGAGTGGGATGTCAATAATCCCGCCTCAGCCGAAGGCTTTACAGTAATATTTAGCAAAGCTAGAGATGAGAAGAAGTCAAATGAGGCTCCTGGGAACACATCAGCAAAAAACAATACATCCAGACCAGATGAGAATTATCAGTATTCCCCCATGGTATGTAATATCACTAACTAAATTTATCCATCAAAACATAGTTTAACATGTTAAAGCATTATATCATCGATCAAAAAAGGTCAGAAGTTCGAATCTCCACCTCCGTATGGTGTTGTTGAATTCAAAGTGAAATATCACTTAACTTACTTGGCTTTCGCTTCATCTTTCTTCCCACATTCTGGTTGGAATTTACTACAAATTCTCTTGTGTGTTTGGATGCAGAAAAAATGGTTTTGCTGTTTCTGAAACTGATAGGGAGTGATGGTGTTGGTAACAACAGACATGGTGAAAGAAGGCTAAAGATTTTCTGATTTATGAGTGAGATGCAGAATCAAGTAGGGATGTGATGGTTTATTTCCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTCTCTCTCTCTGTACCTCTGATGACTATATATGCAAAATATAGAATACAAAAATTTTCATGACAAGCATATAGAAGTTGAGCAGTGGTTATAGCTCCCTGTAAGTCTCGCTCTAATAGAAACTTTTTGCTTCTTTCA TTAGCTTCCAACACCCAATTCTCCTTTCTTCCTTCCTTCTTCCTTCTCTCTTTCTTTCTCTCTCTCTCTCAGTTTCATTCTCTGTGCAGAAAGCTTTGTTAATGTATTTTAATGGCATCGGATAAAGGTCGCCCCTTGCCGAAATTCGGTGAGTGGGATGTCAATAATCCCGCCTCAGCCGAAGGCTTTACAGTAATATTTAGCAAAGCTAGAGATGAGAAGAAGTCAAATGAGGCTCCTGGGAACACATCAGCAAAAAACAATACATCCAGACCAGATGAGAATTATCAGTATTCCCCCATGAAAAAATGGTTTTGCTGTTTCTGAAACTGATAGGGAGTGATGGTGTTGGTAACAACAGACATGGTGAAAGAAGGCTAAAGATTTTCTGATTTATGAGTGAGATGCAGAATCAAGTAGGGATGTGATGGTTTATTTCCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTCTCTCTCTCTGTACCTCTGATGACTATATATGCAAAATATAGAATACAAAAATTTTCATGACAAGCATATAGAAGTTGAGCAGTGGTTATAGCTCCCTGTAAGTCTCGCTCTAATAGAAACTTTTTGCTTCTTTCA ATGGCATCGGATAAAGGTCGCCCCTTGCCGAAATTCGGTGAGTGGGATGTCAATAATCCCGCCTCAGCCGAAGGCTTTACAGTAATATTTAGCAAAGCTAGAGATGAGAAGAAGTCAAATGAGGCTCCTGGGAACACATCAGCAAAAAACAATACATCCAGACCAGATGAGAATTATCAGTATTCCCCCATGAAAAAATGGTTTTGCTGTTTCTGA MASDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAPGNTSAKNNTSRPDENYQYSPMKKWFCCF Homology
BLAST of Tan0000291 vs. ExPASy Swiss-Prot
Match: O22633 (Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 5.9e-16 Identity = 42/70 (60.00%), Postives = 50/70 (71.43%), Query Frame = 0
BLAST of Tan0000291 vs. ExPASy Swiss-Prot
Match: Q8GYN5 (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 5.5e-06 Identity = 27/67 (40.30%), Postives = 38/67 (56.72%), Query Frame = 0
BLAST of Tan0000291 vs. NCBI nr
Match: KGN58221.1 (hypothetical protein Csa_017629 [Cucumis sativus]) HSP 1 Score: 146.0 bits (367), Expect = 1.3e-31 Identity = 67/71 (94.37%), Postives = 70/71 (98.59%), Query Frame = 0
BLAST of Tan0000291 vs. NCBI nr
Match: XP_038883812.1 (protein NOI4-like isoform X1 [Benincasa hispida]) HSP 1 Score: 145.2 bits (365), Expect = 2.1e-31 Identity = 66/68 (97.06%), Postives = 67/68 (98.53%), Query Frame = 0
BLAST of Tan0000291 vs. NCBI nr
Match: XP_038883820.1 (protein NOI4-like isoform X2 [Benincasa hispida]) HSP 1 Score: 145.2 bits (365), Expect = 2.1e-31 Identity = 66/68 (97.06%), Postives = 67/68 (98.53%), Query Frame = 0
BLAST of Tan0000291 vs. NCBI nr
Match: KAG6581070.1 (Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 142.5 bits (358), Expect = 1.4e-30 Identity = 64/68 (94.12%), Postives = 67/68 (98.53%), Query Frame = 0
BLAST of Tan0000291 vs. NCBI nr
Match: KAG6588926.1 (Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 130.6 bits (327), Expect = 5.5e-27 Identity = 59/69 (85.51%), Postives = 63/69 (91.30%), Query Frame = 0
BLAST of Tan0000291 vs. ExPASy TrEMBL
Match: A0A0A0LDP9 (AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G595220 PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 6.1e-32 Identity = 67/71 (94.37%), Postives = 70/71 (98.59%), Query Frame = 0
BLAST of Tan0000291 vs. ExPASy TrEMBL
Match: A0A5D3E371 (RPM1-interacting protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold595G00620 PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.2e-24 Identity = 57/63 (90.48%), Postives = 61/63 (96.83%), Query Frame = 0
BLAST of Tan0000291 vs. ExPASy TrEMBL
Match: A0A5J5AK52 (AvrRpt-cleavage domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_004861 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 7.5e-22 Identity = 56/74 (75.68%), Postives = 63/74 (85.14%), Query Frame = 0
BLAST of Tan0000291 vs. ExPASy TrEMBL
Match: A0A2P5B5J0 (RIN4, pathogenic type III effector avirulence factor Avr cleavage site OS=Parasponia andersonii OX=3476 GN=PanWU01x14_269930 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 9.7e-22 Identity = 55/76 (72.37%), Postives = 61/76 (80.26%), Query Frame = 0
BLAST of Tan0000291 vs. ExPASy TrEMBL
Match: B9SLS6 (NOI, putative OS=Ricinus communis OX=3988 GN=RCOM_0530960 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 2.8e-21 Identity = 54/71 (76.06%), Postives = 57/71 (80.28%), Query Frame = 0
BLAST of Tan0000291 vs. TAIR 10
Match: AT5G63270.1 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 83.2 bits (204), Expect = 9.3e-17 Identity = 43/78 (55.13%), Postives = 51/78 (65.38%), Query Frame = 0
BLAST of Tan0000291 vs. TAIR 10
Match: AT5G55850.3 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 82.8 bits (203), Expect = 1.2e-16 Identity = 41/69 (59.42%), Postives = 49/69 (71.01%), Query Frame = 0
BLAST of Tan0000291 vs. TAIR 10
Match: AT2G04410.1 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 81.6 bits (200), Expect = 2.7e-16 Identity = 41/71 (57.75%), Postives = 50/71 (70.42%), Query Frame = 0
BLAST of Tan0000291 vs. TAIR 10
Match: AT5G40645.1 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 80.1 bits (196), Expect = 7.9e-16 Identity = 41/65 (63.08%), Postives = 49/65 (75.38%), Query Frame = 0
BLAST of Tan0000291 vs. TAIR 10
Match: AT5G55850.1 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 79.0 bits (193), Expect = 1.8e-15 Identity = 36/43 (83.72%), Postives = 40/43 (93.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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