Tan0000204 (gene) Snake gourd v1

Overview


Name	Tan0000204
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	protein RTE1-HOMOLOG
Location	LG01: 12282313 .. 12284791 (-)
RNA-Seq Expression	Tan0000204
Synteny	Tan0000204

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGATTCTCTGATAAATACTGGAAAGTTACTACCCATAACTTATGTTCGGGCGTCTTTTGGTCCATGAAACGAACTTTAACTCTGATTCTTCATGCGTTGTTTTTCCCTTTCTTTCTTCTTTAGCACGGATTCATTGAAACTTTGGTTGAACAGCCTAATTTCATTCTTCAAGATGAAGTTTAAGGCCTCTGTATAAACTTTCTTTTACATGCTCGCTTTCTGCAATGATCCCCCAAAAAAGCAAAAGGGATTAGCTGAGATTGTGAAATTGAGGGAACCAAATTGGGACTGTTAAGTTTAGGTGGATCTTTCCTTGTAGCTCTGTTAAAGTGAGGGTATTCATTTCATTTCATTTCAGGCAGCATTTTATGACTTTGGAAATGGAAACAAGTAACGACCCTGAGAATCAGATGATGATTGAAGGACATATTGCTCAGAATATGAAGATTGATCCAGAGAGAGCCCGGTTTCCTTGTTGCATTGTGTGGACACCTCTTCCTGTTATTTCGTGGCTTATTCCTTTCATTGGTCACATTGGTATTGGCAGAGAGGATGGAGTCATCTTGGATTTTGCAGGCCCCAATTTTGTGTGTGTGGATAACTTCACATTTGGAGCAGTCGCACGGTATATTCCAATCAACAGAGAGAAGGTGCAAACCAATTTCTACATTTGAACTAAAGATCAATCTTTTACAATCATCTTTCCCTCAATTTTGCTGTGTTACCAAAATTCATGGCATGATACTGATAGGAACCTCTGTCCCTTTTGAAGTTTTTTTTGCCCATTTCCTACCCAACTGATTTGATTGTAAACAACATGCAGTGTTGCATTTCCACTCGTAGAACTGAAGATGAATTCAGGGAAGTTGATCATGGTAGAGAAATTGCAACATGGGATGATGCATTGCGGGGGAGCACTCAAGAGTTCCAACACCGAGCCTACAATCTCTTAACTTGCAATTGCCATTCCTTTGTAGCTAATAATCTGAACAGACTTGGCTTTCGCACAGGTGGATGGAATGTGGTGAACCTTGCAGCTCTGATCTTTCTTAAGGGTCGGTGGGTTAGTAAAGGAGCTGTGATCCGGACGTTCTTACCATTTGTCGTGGTATTCAGTATAGGACTTGCACTGGGGGGTACTACGTTCCTAACCTTCTTGGCATTCTTCACTTTCTTCCTGGTTGCTTGGTTCATTCTTGGTACTTATGTCTTCAAAAATTTGGTTCAGTTGTAATGTTTTCTACATTATTTTACAAATTGGATACTGTGAATTGAAGGGAGGTAGATTGATTTTCCTTATTGTATCTGTCCAAATCTTTGTTATTCTGTTGTGCCCTTCCTAGGGCGTATCATATACGTAGATGGGGGCAAAACATCTAATGTGACTCTCACGACCCTAACTACTAGCAACCTGTTTTTCAAGTCACTAATCAACAGAGTTCATGAATTGTTTATCAGATAAGTGATTATGATATATCAAAAAACCTTAACTACTATCAACTTATGGAGTTCATGAATTGTTTATCAACTTATTTTTTAAGTCATTAATCAATAGAGTTCATGAATTGTTTATAAGATAAGTGATTATGATATATCAAAATAATAGAGTTCTCAGAAAAGTGATTATGATATATCAAAATATATCAAGTTGAATTGAATAACTATTTGGGCTTAGGTTGAATTGAATAACTATTTTTTTTTTAAAATTAAGTTTAGGCTGAGTTTCCTTGTTTGTTATCTACTTTGTGTTTTCAAAAGTAAGTTTCAAAGCAAGCACAATCTAAAATGGGTCCTAAACCATAAACCATTCGACTTCTATAGTGATTAGGTGAACTTGGGTGGGTTTTATGCTGGTTTTTTTTATGTTTCGAAAATTTTTTTAGAAATATACATTTGTTTGTAAAGCATTTTAGAAAAAAAAAAGGTGATTGTATCAAAGTTTGATATGCTATAATCAGTAATTTGAGTTCCATGCAATTTCTAATGAAATTGTCTACAAGAAGATTTAACCATTTAACTGTACAATTTTAAACCAATTTTAAATATATGTTATACTTATGCCTGTTGAACAAATTATTTCACTTAAAAGACAAGTTTATCGAGAATTGCAAGATTGAACAGAGCAGTAAGTGTTGTATACTTTTAACTCTCCTTTTGCTCCCTAGATAAATAACTTTTTTTTCCTGCTCATTCAATGAAATCACTTTGTCACACCAGGATCCACTTCCTAGTATGAAGACAAATAGATAAAGACAAATAGATAAAGGTATATGTTACCTTACTTTTAAGCTTGTGTTTCCCTCTAAAATGGAAGGGAAGGGTAGCTTGAGATTCAACTTAGGGCCCTAGAATGAAAAAATCACTCCACTCAAAAACAAGTTCTCTTTTTCCTAACAAACACTATTGTATAGAAGCTGCTAAACCATTTGAAACTAATTTCCTTTTGCTGTACAGGTAATCAGGATGAAGACTGA

mRNA sequence

ATGGCTGATTCTCTGATAAATACTGGAAAGCAGCATTTTATGACTTTGGAAATGGAAACAAGTAACGACCCTGAGAATCAGATGATGATTGAAGGACATATTGCTCAGAATATGAAGATTGATCCAGAGAGAGCCCGGTTTCCTTGTTGCATTGTGTGGACACCTCTTCCTGTTATTTCGTGGCTTATTCCTTTCATTGGTCACATTGGTATTGGCAGAGAGGATGGAGTCATCTTGGATTTTGCAGGCCCCAATTTTGTGTGTGTGGATAACTTCACATTTGGAGCAGTCGCACGGTATATTCCAATCAACAGAGAGAAGTGTTGCATTTCCACTCGTAGAACTGAAGATGAATTCAGGGAAGTTGATCATGGTAGAGAAATTGCAACATGGGATGATGCATTGCGGGGGAGCACTCAAGAGTTCCAACACCGAGCCTACAATCTCTTAACTTGCAATTGCCATTCCTTTGTAGCTAATAATCTGAACAGACTTGGCTTTCGCACAGGTGGATGGAATGTGGTGAACCTTGCAGCTCTGATCTTTCTTAAGGGTCGGTGGGTTAGTAAAGGAGCTGTGATCCGGACGTTCTTACCATTTGTCGTGGTATTCAGTATAGGACTTGCACTGGGGGGTACTACGTTCCTAACCTTCTTGGCATTCTTCACTTTCTTCCTGGTTGCTTGGTTCATTCTTGGTAATCAGGATGAAGACTGA

Coding sequence (CDS)

ATGGCTGATTCTCTGATAAATACTGGAAAGCAGCATTTTATGACTTTGGAAATGGAAACAAGTAACGACCCTGAGAATCAGATGATGATTGAAGGACATATTGCTCAGAATATGAAGATTGATCCAGAGAGAGCCCGGTTTCCTTGTTGCATTGTGTGGACACCTCTTCCTGTTATTTCGTGGCTTATTCCTTTCATTGGTCACATTGGTATTGGCAGAGAGGATGGAGTCATCTTGGATTTTGCAGGCCCCAATTTTGTGTGTGTGGATAACTTCACATTTGGAGCAGTCGCACGGTATATTCCAATCAACAGAGAGAAGTGTTGCATTTCCACTCGTAGAACTGAAGATGAATTCAGGGAAGTTGATCATGGTAGAGAAATTGCAACATGGGATGATGCATTGCGGGGGAGCACTCAAGAGTTCCAACACCGAGCCTACAATCTCTTAACTTGCAATTGCCATTCCTTTGTAGCTAATAATCTGAACAGACTTGGCTTTCGCACAGGTGGATGGAATGTGGTGAACCTTGCAGCTCTGATCTTTCTTAAGGGTCGGTGGGTTAGTAAAGGAGCTGTGATCCGGACGTTCTTACCATTTGTCGTGGTATTCAGTATAGGACTTGCACTGGGGGGTACTACGTTCCTAACCTTCTTGGCATTCTTCACTTTCTTCCTGGTTGCTTGGTTCATTCTTGGTAATCAGGATGAAGACTGA

Protein sequence

MADSLINTGKQHFMTLEMETSNDPENQMMIEGHIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVARYIPINREKCCISTRRTEDEFREVDHGREIATWDDALRGSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVIRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVAWFILGNQDED

Homology

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BLAST of Tan0000204 vs. ExPASy Swiss-Prot
Match: Q9SD42 (Protein RTE1-HOMOLOG OS=Arabidopsis thaliana OX=3702 GN=RTH PE=2 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.0e-72
Identity = 136/224 (60.71%), Postives = 166/224 (74.11%), Query Frame = 0


Query: 19  ETSNDPENQMMIEGHIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVI 78
           ET+ D E++MMI   ++  MKIDP+R RFPCCIVWTPLP ISWL+PFIGH+GI REDGVI
Sbjct: 3   ETATDSEHRMMI--GLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVI 62

Query: 79  LDFAGPNFVCVDNFTFGAVARYIPINREK---------CCISTRRTEDEFREVDHGREIA 138
           LDFAGPNFVCVDNF FGAV+RYI IN+E               RR E E  E  H +E  
Sbjct: 63  LDFAGPNFVCVDNFAFGAVSRYIQINKEMESSRSSSSGMFNGERRYEQE--EDSHEKE-P 122

Query: 139 TWDDALRGSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVS 198
           TWDDALR STQE+QH +YN+LTCNCHSFVANNLNRL  ++GGWNVVNLA L+  KGRWV+
Sbjct: 123 TWDDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWVN 182

Query: 199 KGAVIRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVAWFILG 234
           K A++++ LP ++V++IG+ LGG TF+   +     L  WFI+G
Sbjct: 183 KTAIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLLTGWFIIG 221

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BLAST of Tan0000204 vs. ExPASy Swiss-Prot
Match: F4ITL6 (Protein REVERSION-TO-ETHYLENE SENSITIVITY1 OS=Arabidopsis thaliana OX=3702 GN=RTE1 PE=1 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.0e-56
Identity = 108/201 (53.73%), Postives = 144/201 (71.64%), Query Frame = 0


Query: 39  KIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVA 98
           +ID ++++FPCCIVWTPLPV+SWL PFIGHIG+ REDGVILDFAG NF+ VD+F FG  A
Sbjct: 43  EIDTKKSKFPCCIVWTPLPVVSWLAPFIGHIGLCREDGVILDFAGSNFINVDDFAFGPPA 102

Query: 99  RYIPINREKCCI----STRRTEDEFREVDHGREIATWDDALRGSTQEFQHRAYNLLTCNC 158
           RY+ ++R KCC+         +  F+  D G    TWD+AL  ST+ F+H+ YN+ TCNC
Sbjct: 103 RYLQLDRTKCCLPPNMGGHTCKYGFKHTDFG-TARTWDNALSSSTRSFEHKTYNIFTCNC 162

Query: 159 HSFVANNLNRLGFRTGG---WNVVNLAALIFLKGRWVSKGAVIRTFLPFVVVFSIGLALG 218
           HSFVAN LNRL +  GG   WN+VN+A L+ +KG+W++  +V+R+FLP  VV S+G+ L 
Sbjct: 163 HSFVANCLNRLCY--GGSMEWNMVNVAILLMIKGKWINGSSVVRSFLPCAVVTSLGVVLV 222

Query: 219 GTTFLTFLAFFTFFLVAWFIL 233
           G  FL  L+ F+  L AWFI+
Sbjct: 223 GWPFLIGLSSFSLLLFAWFII 240

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BLAST of Tan0000204 vs. ExPASy Swiss-Prot
Match: Q8BVA2 (Transmembrane protein 222 OS=Mus musculus OX=10090 GN=Tmem222 PE=1 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 6.8e-32
Identity = 77/199 (38.69%), Postives = 112/199 (56.28%), Query Frame = 0


Query: 17  EMETSNDPENQMMIEGHIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDG 76
           E+ET    E  M  + H +  + +D ER+RFP C+VWTP+PV++W  P IGH+GI    G
Sbjct: 23  EVETPTGAETDMK-QYHGSGGVVMDVERSRFPYCVVWTPIPVLTWFFPIIGHMGICTSAG 82

Query: 77  VILDFAGPNFVCVDNFTFGAVARYIPINREKCCISTRRTEDEFREVDHGREIAT----WD 136
           VI DFAGP FV  DN  FG  A+                   F ++D G+  A+    WD
Sbjct: 83  VIRDFAGPYFVSEDNMAFGKPAK-------------------FWKLDPGQVYASGPNAWD 142

Query: 137 DALRGSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTG-GWNVVNLAALIFLKGRWVSKG 196
            A+  +++E++HR +NL   NCHS VA  LN + +     WN+V L     + G++VS G
Sbjct: 143 TAVHDASEEYKHRMHNLCCDNCHSHVALALNLMRYNNSTNWNMVTLCCFCLIYGKYVSVG 201

Query: 197 AVIRTFLPFVVVFSIGLAL 211
           A ++T+LPFV++  I L +
Sbjct: 203 AFVKTWLPFVLLLGIILTV 201

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BLAST of Tan0000204 vs. ExPASy Swiss-Prot
Match: Q9H0R3 (Transmembrane protein 222 OS=Homo sapiens OX=9606 GN=TMEM222 PE=1 SV=2)

HSP 1 Score: 136.7 bits (343), Expect = 3.4e-31
Identity = 69/172 (40.12%), Postives = 99/172 (57.56%), Query Frame = 0


Query: 40  IDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVAR 99
           +D ER+RFP C+VWTP+PV++W  P IGH+GI    GVI DFAGP FV  DN  FG  A+
Sbjct: 45  MDVERSRFPYCVVWTPIPVLTWFFPIIGHMGICTSTGVIRDFAGPYFVSEDNMAFGKPAK 104

Query: 100 YIPINREKCCISTRRTEDEFREVDHGREIATWDDALRGSTQEFQHRAYNLLTCNCHSFVA 159
           Y  ++  +   S                   WD A+  +++E++HR +NL   NCHS VA
Sbjct: 105 YWKLDPAQVYASGPN---------------AWDTAVHDASEEYKHRMHNLCCDNCHSHVA 164

Query: 160 NNLNRLGFRTG-GWNVVNLAALIFLKGRWVSKGAVIRTFLPFVVVFSIGLAL 211
             LN + +     WN+V L     L G++VS GA ++T+LPF+++  I L +
Sbjct: 165 LALNLMRYNNSTNWNMVTLCFFCLLYGKYVSVGAFVKTWLPFILLLGIILTV 201

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BLAST of Tan0000204 vs. NCBI nr
Match: XP_031740651.1 (protein RTE1-HOMOLOG isoform X1 [Cucumis sativus])

HSP 1 Score: 429.1 bits (1102), Expect = 2.5e-116
Identity = 204/223 (91.48%), Postives = 214/223 (95.96%), Query Frame = 0


Query: 11  QHFMTLEMETSNDPENQMMIEGHIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIG 70
           QHFM+LEME+S DPENQ+MIEG+IAQNMKIDPERARFPCCIVWTPLPVISWL+PFIGHIG
Sbjct: 5   QHFMSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIG 64

Query: 71  IGREDGVILDFAGPNFVCVDNFTFGAVARYIPINREKCCISTRRTEDEFREVDHGREIAT 130
           IGREDGVILDFAGPNFVCVDNFTFGAVARY+ INR+KCCIS  R+E+E REVDH REI+T
Sbjct: 65  IGREDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREIST 124

Query: 131 WDDALRGSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSK 190
           WDDALR STQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSK
Sbjct: 125 WDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSK 184

Query: 191 GAVIRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVAWFILG 234
           GAVIRTFLPFVVVFSIGLALG TTFLTFLAFFTFFLV WFILG
Sbjct: 185 GAVIRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILG 227

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BLAST of Tan0000204 vs. NCBI nr
Match: XP_004146489.1 (protein RTE1-HOMOLOG isoform X2 [Cucumis sativus] >KGN53282.1 hypothetical protein Csa_014607 [Cucumis sativus])

HSP 1 Score: 421.8 bits (1083), Expect = 4.0e-114
Identity = 201/220 (91.36%), Postives = 211/220 (95.91%), Query Frame = 0


Query: 14  MTLEMETSNDPENQMMIEGHIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGR 73
           M+LEME+S DPENQ+MIEG+IAQNMKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGR
Sbjct: 1   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 74  EDGVILDFAGPNFVCVDNFTFGAVARYIPINREKCCISTRRTEDEFREVDHGREIATWDD 133
           EDGVILDFAGPNFVCVDNFTFGAVARY+ INR+KCCIS  R+E+E REVDH REI+TWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD 120

Query: 134 ALRGSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 193
           ALR STQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV
Sbjct: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 194 IRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVAWFILG 234
           IRTFLPFVVVFSIGLALG TTFLTFLAFFTFFLV WFILG
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILG 220

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BLAST of Tan0000204 vs. NCBI nr
Match: KAG6600597.1 (Protein RTE1-HOMOLOG, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 419.5 bits (1077), Expect = 2.0e-113
Identity = 198/224 (88.39%), Postives = 213/224 (95.09%), Query Frame = 0


Query: 10  KQHFMTLEMETSNDPENQMMIEGHIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHI 69
           ++H +TLEM +SNDPENQMMIEG++ Q MKIDPERARFPCCIVWTPLPVISWLIPFIGHI
Sbjct: 294 RKHLITLEMGSSNDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHI 353

Query: 70  GIGREDGVILDFAGPNFVCVDNFTFGAVARYIPINREKCCISTRRTEDEFREVDHGREIA 129
           GIGREDGVILDFAGPNFVCVDNFTFGAVARY+ IN +KCCIST R+EDEFREVD+GREI+
Sbjct: 354 GIGREDGVILDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDEFREVDNGREIS 413

Query: 130 TWDDALRGSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVS 189
           TWDDALR STQEFQHRAYNLLTCNCHSFVANNLNRLGF TGGWNVVNLAAL+FLKGRWVS
Sbjct: 414 TWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVS 473

Query: 190 KGAVIRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVAWFILG 234
           KGAVIRTFLPF VVFSIG+A+GGTTFLTFLAFFTFFLV WF+LG
Sbjct: 474 KGAVIRTFLPFGVVFSIGVAMGGTTFLTFLAFFTFFLVGWFVLG 517

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BLAST of Tan0000204 vs. NCBI nr
Match: XP_038884143.1 (protein RTE1-HOMOLOG [Benincasa hispida] >XP_038884151.1 protein RTE1-HOMOLOG [Benincasa hispida])

HSP 1 Score: 419.5 bits (1077), Expect = 2.0e-113
Identity = 198/216 (91.67%), Postives = 210/216 (97.22%), Query Frame = 0


Query: 18  METSNDPENQMMIEGHIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 77
           ME+SNDPENQ+MIEG+IAQNMKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGREDGV
Sbjct: 1   MESSNDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 60

Query: 78  ILDFAGPNFVCVDNFTFGAVARYIPINREKCCISTRRTEDEFREVDHGREIATWDDALRG 137
           ILDFAGPNFVCVDNFTFGAVARY+ INR+KCCIST R+E+E REVDHGREI+TWDDALR 
Sbjct: 61  ILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISTHRSEEELREVDHGREISTWDDALRR 120

Query: 138 STQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVIRTF 197
           STQEFQHR+YNLLTCNCHSFVANNLNRLGFR GGWNVVNLAALIFLKGRWVSKGAVIRTF
Sbjct: 121 STQEFQHRSYNLLTCNCHSFVANNLNRLGFRIGGWNVVNLAALIFLKGRWVSKGAVIRTF 180

Query: 198 LPFVVVFSIGLALGGTTFLTFLAFFTFFLVAWFILG 234
           LPFVVVF+IGLA+GGTTFLTFLAFFTFFLV WFILG
Sbjct: 181 LPFVVVFNIGLAVGGTTFLTFLAFFTFFLVGWFILG 216

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BLAST of Tan0000204 vs. NCBI nr
Match: XP_022136620.1 (protein RTE1-HOMOLOG [Momordica charantia])

HSP 1 Score: 415.2 bits (1066), Expect = 3.7e-112
Identity = 196/216 (90.74%), Postives = 207/216 (95.83%), Query Frame = 0


Query: 18  METSNDPENQMMIEGHIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 77
           ME++NDPENQ+M+EG+IAQNMKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGREDGV
Sbjct: 1   MESNNDPENQLMVEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 60

Query: 78  ILDFAGPNFVCVDNFTFGAVARYIPINREKCCISTRRTEDEFREVDHGREIATWDDALRG 137
           ILDFAGPNFVCVDNFTFGAVARY+ IN EKCCIST R+EDE RE DHGREI+TWDDALR 
Sbjct: 61  ILDFAGPNFVCVDNFTFGAVARYLQINGEKCCISTHRSEDEMREFDHGREISTWDDALRR 120

Query: 138 STQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVIRTF 197
           STQEFQHR+YNLLTCNCHSFVANNLNRLGFR+GGWNVVNLA LIFLKGRWVS GAVIRTF
Sbjct: 121 STQEFQHRSYNLLTCNCHSFVANNLNRLGFRSGGWNVVNLATLIFLKGRWVSTGAVIRTF 180

Query: 198 LPFVVVFSIGLALGGTTFLTFLAFFTFFLVAWFILG 234
           LPFVVVFSIGLALGGTTFLTFLAFFTFFLV WFILG
Sbjct: 181 LPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILG 216

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BLAST of Tan0000204 vs. ExPASy TrEMBL
Match: A0A0A0KXZ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G044470 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 1.9e-114
Identity = 201/220 (91.36%), Postives = 211/220 (95.91%), Query Frame = 0


Query: 14  MTLEMETSNDPENQMMIEGHIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGR 73
           M+LEME+S DPENQ+MIEG+IAQNMKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGR
Sbjct: 1   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 74  EDGVILDFAGPNFVCVDNFTFGAVARYIPINREKCCISTRRTEDEFREVDHGREIATWDD 133
           EDGVILDFAGPNFVCVDNFTFGAVARY+ INR+KCCIS  R+E+E REVDH REI+TWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD 120

Query: 134 ALRGSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 193
           ALR STQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV
Sbjct: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 194 IRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVAWFILG 234
           IRTFLPFVVVFSIGLALG TTFLTFLAFFTFFLV WFILG
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILG 220

[Close]

BLAST of Tan0000204 vs. ExPASy TrEMBL
Match: A0A6J1C4G0 (protein RTE1-HOMOLOG OS=Momordica charantia OX=3673 GN=LOC111008280 PE=4 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 1.8e-112
Identity = 196/216 (90.74%), Postives = 207/216 (95.83%), Query Frame = 0


Query: 18  METSNDPENQMMIEGHIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 77
           ME++NDPENQ+M+EG+IAQNMKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGREDGV
Sbjct: 1   MESNNDPENQLMVEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGREDGV 60

Query: 78  ILDFAGPNFVCVDNFTFGAVARYIPINREKCCISTRRTEDEFREVDHGREIATWDDALRG 137
           ILDFAGPNFVCVDNFTFGAVARY+ IN EKCCIST R+EDE RE DHGREI+TWDDALR 
Sbjct: 61  ILDFAGPNFVCVDNFTFGAVARYLQINGEKCCISTHRSEDEMREFDHGREISTWDDALRR 120

Query: 138 STQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVIRTF 197
           STQEFQHR+YNLLTCNCHSFVANNLNRLGFR+GGWNVVNLA LIFLKGRWVS GAVIRTF
Sbjct: 121 STQEFQHRSYNLLTCNCHSFVANNLNRLGFRSGGWNVVNLATLIFLKGRWVSTGAVIRTF 180

Query: 198 LPFVVVFSIGLALGGTTFLTFLAFFTFFLVAWFILG 234
           LPFVVVFSIGLALGGTTFLTFLAFFTFFLV WFILG
Sbjct: 181 LPFVVVFSIGLALGGTTFLTFLAFFTFFLVGWFILG 216

[Close]

BLAST of Tan0000204 vs. ExPASy TrEMBL
Match: A0A1S4DZL7 (protein RTE1-HOMOLOG OS=Cucumis melo OX=3656 GN=LOC103493222 PE=4 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 3.1e-112
Identity = 197/220 (89.55%), Postives = 210/220 (95.45%), Query Frame = 0


Query: 14  MTLEMETSNDPENQMMIEGHIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGR 73
           M+LEME++ DPENQ+MIEG+IAQ+MKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGR
Sbjct: 1   MSLEMESNKDPENQLMIEGNIAQHMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 74  EDGVILDFAGPNFVCVDNFTFGAVARYIPINREKCCISTRRTEDEFREVDHGREIATWDD 133
           EDGVILDFAGPNFVCVDNFTFGAVARY+ INR+KCCIS  R+E+E REVD  REI+TWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDRSREISTWDD 120

Query: 134 ALRGSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 193
           ALR STQEFQHR+YNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV
Sbjct: 121 ALRRSTQEFQHRSYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 194 IRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVAWFILG 234
           IRTFLPFVVVFSIGLALG TTFLTFLAFFTFFLV WFILG
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILG 220

[Close]

BLAST of Tan0000204 vs. ExPASy TrEMBL
Match: A0A6J1FW19 (protein RTE1-HOMOLOG-like OS=Cucurbita moschata OX=3662 GN=LOC111447395 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 1.1e-109
Identity = 193/216 (89.35%), Postives = 205/216 (94.91%), Query Frame = 0


Query: 18  METSNDPENQMMIEGHIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 77
           M +SNDPENQMMIEG++ Q MKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV
Sbjct: 1   MGSSNDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 60

Query: 78  ILDFAGPNFVCVDNFTFGAVARYIPINREKCCISTRRTEDEFREVDHGREIATWDDALRG 137
           ILDFAGPNFVCVDNFTFGAVARY+ IN +KCCIST R+EDEFREVD+GREI+TWDDALR 
Sbjct: 61  ILDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDEFREVDNGREISTWDDALRR 120

Query: 138 STQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVIRTF 197
           STQEFQHRAYNLLTCNCHSFVANNLNRLGF TGGWNVVNLAAL+FLKGRWVSKGAVIRTF
Sbjct: 121 STQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAVIRTF 180

Query: 198 LPFVVVFSIGLALGGTTFLTFLAFFTFFLVAWFILG 234
           LPF VVFSIG+A+ GTTFLTFLAFFTFFLV WF+LG
Sbjct: 181 LPFGVVFSIGVAMVGTTFLTFLAFFTFFLVGWFVLG 216

[Close]

BLAST of Tan0000204 vs. ExPASy TrEMBL
Match: A0A6J1J2Z1 (protein RTE1-HOMOLOG-like OS=Cucurbita maxima OX=3661 GN=LOC111481385 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.2e-108
Identity = 191/216 (88.43%), Postives = 203/216 (93.98%), Query Frame = 0


Query: 18  METSNDPENQMMIEGHIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 77
           M +SNDPENQMMIEG++ Q MKIDPE ARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV
Sbjct: 1   MGSSNDPENQMMIEGNVVQEMKIDPESARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 60

Query: 78  ILDFAGPNFVCVDNFTFGAVARYIPINREKCCISTRRTEDEFREVDHGREIATWDDALRG 137
           ILDFA PNFVCVDNFTFGAVARY+ IN +KCCIST R+EDEFREVD+GREI+TWDDALR 
Sbjct: 61  ILDFADPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDEFREVDNGREISTWDDALRR 120

Query: 138 STQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAVIRTF 197
           STQEFQHR YNLLTCNCHSFVANNLNRLGF TGGWNVVNLAAL+FLKGRWVSKGAVIRTF
Sbjct: 121 STQEFQHRPYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAVIRTF 180

Query: 198 LPFVVVFSIGLALGGTTFLTFLAFFTFFLVAWFILG 234
           LPF VVFSIG+A+GGTTFLTFLAFFTFFLV WF+LG
Sbjct: 181 LPFGVVFSIGVAMGGTTFLTFLAFFTFFLVGWFVLG 216

[Close]

BLAST of Tan0000204 vs. TAIR 10
Match: AT3G51040.1 (RTE1-homolog )

HSP 1 Score: 274.6 bits (701), Expect = 7.3e-74
Identity = 136/224 (60.71%), Postives = 166/224 (74.11%), Query Frame = 0


Query: 19  ETSNDPENQMMIEGHIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVI 78
           ET+ D E++MMI   ++  MKIDP+R RFPCCIVWTPLP ISWL+PFIGH+GI REDGVI
Sbjct: 3   ETATDSEHRMMI--GLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVI 62

Query: 79  LDFAGPNFVCVDNFTFGAVARYIPINREK---------CCISTRRTEDEFREVDHGREIA 138
           LDFAGPNFVCVDNF FGAV+RYI IN+E               RR E E  E  H +E  
Sbjct: 63  LDFAGPNFVCVDNFAFGAVSRYIQINKEMESSRSSSSGMFNGERRYEQE--EDSHEKE-P 122

Query: 139 TWDDALRGSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVS 198
           TWDDALR STQE+QH +YN+LTCNCHSFVANNLNRL  ++GGWNVVNLA L+  KGRWV+
Sbjct: 123 TWDDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWVN 182

Query: 199 KGAVIRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVAWFILG 234
           K A++++ LP ++V++IG+ LGG TF+   +     L  WFI+G
Sbjct: 183 KTAIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLLTGWFIIG 221

[Close]

BLAST of Tan0000204 vs. TAIR 10
Match: AT3G51040.2 (RTE1-homolog )

HSP 1 Score: 274.6 bits (701), Expect = 7.3e-74
Identity = 136/224 (60.71%), Postives = 166/224 (74.11%), Query Frame = 0


Query: 19  ETSNDPENQMMIEGHIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVI 78
           ET+ D E++MMI   ++  MKIDP+R RFPCCIVWTPLP ISWL+PFIGH+GI REDGVI
Sbjct: 3   ETATDSEHRMMI--GLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVI 62

Query: 79  LDFAGPNFVCVDNFTFGAVARYIPINREK---------CCISTRRTEDEFREVDHGREIA 138
           LDFAGPNFVCVDNF FGAV+RYI IN+E               RR E E  E  H +E  
Sbjct: 63  LDFAGPNFVCVDNFAFGAVSRYIQINKEMESSRSSSSGMFNGERRYEQE--EDSHEKE-P 122

Query: 139 TWDDALRGSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVS 198
           TWDDALR STQE+QH +YN+LTCNCHSFVANNLNRL  ++GGWNVVNLA L+  KGRWV+
Sbjct: 123 TWDDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWVN 182

Query: 199 KGAVIRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVAWFILG 234
           K A++++ LP ++V++IG+ LGG TF+   +     L  WFI+G
Sbjct: 183 KTAIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLLTGWFIIG 221

[Close]

BLAST of Tan0000204 vs. TAIR 10
Match: AT3G51040.3 (RTE1-homolog )

HSP 1 Score: 274.6 bits (701), Expect = 7.3e-74
Identity = 136/224 (60.71%), Postives = 166/224 (74.11%), Query Frame = 0


Query: 19  ETSNDPENQMMIEGHIAQNMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVI 78
           ET+ D E++MMI   ++  MKIDP+R RFPCCIVWTPLP ISWL+PFIGH+GI REDGVI
Sbjct: 3   ETATDSEHRMMI--GLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVI 62

Query: 79  LDFAGPNFVCVDNFTFGAVARYIPINREK---------CCISTRRTEDEFREVDHGREIA 138
           LDFAGPNFVCVDNF FGAV+RYI IN+E               RR E E  E  H +E  
Sbjct: 63  LDFAGPNFVCVDNFAFGAVSRYIQINKEMESSRSSSSGMFNGERRYEQE--EDSHEKE-P 122

Query: 139 TWDDALRGSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVS 198
           TWDDALR STQE+QH +YN+LTCNCHSFVANNLNRL  ++GGWNVVNLA L+  KGRWV+
Sbjct: 123 TWDDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWVN 182

Query: 199 KGAVIRTFLPFVVVFSIGLALGGTTFLTFLAFFTFFLVAWFILG 234
           K A++++ LP ++V++IG+ LGG TF+   +     L  WFI+G
Sbjct: 183 KTAIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLLTGWFIIG 221

[Close]

BLAST of Tan0000204 vs. TAIR 10
Match: AT2G26070.1 (Protein of unknown function (DUF778) )

HSP 1 Score: 221.5 bits (563), Expect = 7.4e-58
Identity = 108/201 (53.73%), Postives = 144/201 (71.64%), Query Frame = 0


Query: 39  KIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVA 98
           +ID ++++FPCCIVWTPLPV+SWL PFIGHIG+ REDGVILDFAG NF+ VD+F FG  A
Sbjct: 43  EIDTKKSKFPCCIVWTPLPVVSWLAPFIGHIGLCREDGVILDFAGSNFINVDDFAFGPPA 102

Query: 99  RYIPINREKCCI----STRRTEDEFREVDHGREIATWDDALRGSTQEFQHRAYNLLTCNC 158
           RY+ ++R KCC+         +  F+  D G    TWD+AL  ST+ F+H+ YN+ TCNC
Sbjct: 103 RYLQLDRTKCCLPPNMGGHTCKYGFKHTDFG-TARTWDNALSSSTRSFEHKTYNIFTCNC 162

Query: 159 HSFVANNLNRLGFRTGG---WNVVNLAALIFLKGRWVSKGAVIRTFLPFVVVFSIGLALG 218
           HSFVAN LNRL +  GG   WN+VN+A L+ +KG+W++  +V+R+FLP  VV S+G+ L 
Sbjct: 163 HSFVANCLNRLCY--GGSMEWNMVNVAILLMIKGKWINGSSVVRSFLPCAVVTSLGVVLV 222

Query: 219 GTTFLTFLAFFTFFLVAWFIL 233
           G  FL  L+ F+  L AWFI+
Sbjct: 223 GWPFLIGLSSFSLLLFAWFII 240

The following BLAST results are available for this feature:

BLAST of Tan0000204 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SD42	1.0e-72	60.71	Protein RTE1-HOMOLOG OS=Arabidopsis thaliana OX=3702 GN=RTH PE=2 SV=1	[more]
F4ITL6	1.0e-56	53.73	Protein REVERSION-TO-ETHYLENE SENSITIVITY1 OS=Arabidopsis thaliana OX=3702 GN=RT...	[more]
Q8BVA2	6.8e-32	38.69	Transmembrane protein 222 OS=Mus musculus OX=10090 GN=Tmem222 PE=1 SV=1	[more]
Q9H0R3	3.4e-31	40.12	Transmembrane protein 222 OS=Homo sapiens OX=9606 GN=TMEM222 PE=1 SV=2	[more]

BLAST of Tan0000204 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031740651.1	2.5e-116	91.48	protein RTE1-HOMOLOG isoform X1 [Cucumis sativus]	[more]
XP_004146489.1	4.0e-114	91.36	protein RTE1-HOMOLOG isoform X2 [Cucumis sativus] >KGN53282.1 hypothetical prote...	[more]
KAG6600597.1	2.0e-113	88.39	Protein RTE1-HOMOLOG, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038884143.1	2.0e-113	91.67	protein RTE1-HOMOLOG [Benincasa hispida] >XP_038884151.1 protein RTE1-HOMOLOG [B...	[more]
XP_022136620.1	3.7e-112	90.74	protein RTE1-HOMOLOG [Momordica charantia]	[more]

BLAST of Tan0000204 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXZ7	1.9e-114	91.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G044470 PE=4 SV=1	[more]
A0A6J1C4G0	1.8e-112	90.74	protein RTE1-HOMOLOG OS=Momordica charantia OX=3673 GN=LOC111008280 PE=4 SV=1	[more]
A0A1S4DZL7	3.1e-112	89.55	protein RTE1-HOMOLOG OS=Cucumis melo OX=3656 GN=LOC103493222 PE=4 SV=1	[more]
A0A6J1FW19	1.1e-109	89.35	protein RTE1-HOMOLOG-like OS=Cucurbita moschata OX=3662 GN=LOC111447395 PE=4 SV=...	[more]
A0A6J1J2Z1	1.2e-108	88.43	protein RTE1-HOMOLOG-like OS=Cucurbita maxima OX=3661 GN=LOC111481385 PE=4 SV=1	[more]

BLAST of Tan0000204 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51040.1	7.3e-74	60.71	RTE1-homolog	[more]
AT3G51040.2	7.3e-74	60.71	RTE1-homolog	[more]
AT3G51040.3	7.3e-74	60.71	RTE1-homolog	[more]
AT2G26070.1	7.4e-58	53.73	Protein of unknown function (DUF778)	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008496	TMEM222/RTE1	PFAM	PF05608	DUF778	coord: 114..187 e-value: 1.9E-18 score: 67.5 coord: 56..115 e-value: 1.9E-20 score: 74.0
IPR008496	TMEM222/RTE1	PANTHER	PTHR20921	UNCHARACTERIZED	coord: 12..233
None	No IPR available	PANTHER	PTHR20921:SF5	SUBFAMILY NOT NAMED	coord: 12..233

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0000204.1	Tan0000204.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010104	regulation of ethylene-activated signaling pathway
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane