Tan0000186 (gene) Snake gourd v1

Overview


Name	Tan0000186
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	TPD1 protein homolog 1-like
Location	LG01: 101136913 .. 101138924 (-)
RNA-Seq Expression	Tan0000186
Synteny	Tan0000186

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATATTCTAACTGCTCCTCAGAAAATAAAATTTGTTTCTGGGAAGGAAAAAAAAAATGTCCCCGTTGATGGCTGTCATCTTCAAGATTATTTATGTATTCATCTTCATCTCTCTCCTTGCCAAAGGTATGATCAATTAACTCTCTTATAGAAATTTGCATCTTTTTTAGGCCTAAATCTAAAATTTATATAGCTCTTTTTATAATATTCTCACGTAAAAATAAAAATTATGATTCTTTGCTCTACTTTTTTTTGTCTATCTTTTCTTCTAGTTGATTGGGTGGTCCTTGAATCAAAATTCATAATTGTTTTGGAAAAATTAAATGAAGGAAGTATTTTAATCCAAATATATAAGATAGCTTTCGTTTTGATAAGAAAAACATGAATCAAATGACTAATTAAGGACGTGTTTGACAGTGATTTTATTTTAAACTTTATTTCTACTTTTAAAAGTTTGACCACACTACTTGTTAAAAATTTTCTTTGTTTTGTAATCGATTGTTTAACCCTAACTAAATTTTGAAGCTAACACAAAAACACTTCCTAGAAATTTATTTTGTTTTAGAAATTTAATAAAAATTTGAAAAGTTTTAAAATAAAATAAGTTGCTGGCAAATAAGCTTAAAGAAAAAGGCAAGGAAATATCCTTTACTAGTTTTGTTAGTGGAAGCTAGCTTTTATGGCTTTAGGTCACCAACTCTCCTATTCTTTCAACACTAGCATCAACCTCCACACATAGCCTTGCAGACTTTGTGGGCATCTATGTTTTCATAAAATAAGCTCTATGTGAGATTGATTTTGAGAGTATTAAAAGTGATTAAGATGGAGTTTTAACCACTCTTTAATTTTGATTAAAAATTTTATTATGAATCAATCTATTTAAAATTACTTTTTTAAACAGGTTGATTTGCATCATCTATTAAATAACCACCACCTTCTAAAAGTAGAGACTAAAAATTAAGGGTCTCTCACTTACAAATTTTCAATTTTCAATTTTCAATTTTAATGTTAAGATTGACTTCACATATCACCCTCTTTTCTCCATGCTTTTATGGAGGAAAAACAAAAAAAAGTTAAAACTAGAGTGCATTTGTTTAATATAGTTTCTTCTAATATTTTATCAAACAATTTAGAGTAAATAAAATATAAATTTACGTTGAAAGCATATTCCACACCAAAAAAAATGAAATTGAATAAAGCCTTTGGCCCATAATTACAATGTTATTTTGACAAGTCACTTGGACAAAGTAGTTTTGTACCCAATCTTAAAAACAAAAATGCTAACAAAGTTATAATTATTAAAATAGTCCCAAAAATACCAACATGAAAATAGTTTTGGAGAATTGACATTTACTCCTTTCCTTGATGTCGAAGGTTCAAACCTCCTATCCCATTTGTTGTACTAAAAAATAAAAGGAAAAAAATAGTCCCAAAAATAACATGTTCTAGGACACAAATTAACTTGGATGAACATATCAAACTTGATCTAACTTATGTTTGTTCTGTGGAAAATGCTTTGAACATTTAAGGGAGTTTGCAATGCTCAATGGGTAACTTAACAATCAGCCAAACTCCAACCGAGGCAATGGTAAATGGCAAAACAGAATGGAAAGTTACTATCACCAATGAATGCCAAAATTGCACTCAGTTCAATGTGAGATTGAAGTGTGGAGGTTTCAGCACAGTTGAAGCCATTAAACCCACCACCTTAGCCAAGTTGGGGTCTCAATGTGTGGTCAATGGTGGCTTTCCAATCTATTCTGCTGTTCCCATCACCTTCACTTATGCATGGGACCCTTCATTTGATTTCAGGCCTTTCTTCTCCCAAGTTGCTTGTGCCTAGTTACACAAGGTGTTTGCTTTCTCTTTTCTCCAATGTAGGAGTCCTCCTTCACTCCTTTTATGTTCTGTACTACAAGTCTTTTATACAGTTTTAAGTCTTATTTTGGCCCCTTCAAACTTCCATATATATTTATATTGCTACGAACAAAAGTTGGTTGAAGTCAGTTAATG

mRNA sequence

GATATTCTAACTGCTCCTCAGAAAATAAAATTTGTTTCTGGGAAGGAAAAAAAAAATGTCCCCGTTGATGGCTGTCATCTTCAAGATTATTTATGTATTCATCTTCATCTCTCTCCTTGCCAAAGGGAGTTTGCAATGCTCAATGGGTAACTTAACAATCAGCCAAACTCCAACCGAGGCAATGGTAAATGGCAAAACAGAATGGAAAGTTACTATCACCAATGAATGCCAAAATTGCACTCAGTTCAATGTGAGATTGAAGTGTGGAGGTTTCAGCACAGTTGAAGCCATTAAACCCACCACCTTAGCCAAGTTGGGGTCTCAATGTGTGGTCAATGGTGGCTTTCCAATCTATTCTGCTGTTCCCATCACCTTCACTTATGCATGGGACCCTTCATTTGATTTCAGGCCTTTCTTCTCCCAAGTTGCTTGTGCCTAGTTACACAAGGTGTTTGCTTTCTCTTTTCTCCAATGTAGGAGTCCTCCTTCACTCCTTTTATGTTCTGTACTACAAGTCTTTTATACAGTTTTAAGTCTTATTTTGGCCCCTTCAAACTTCCATATATATTTATATTGCTACGAACAAAAGTTGGTTGAAGTCAGTTAATG

Coding sequence (CDS)

ATGTCCCCGTTGATGGCTGTCATCTTCAAGATTATTTATGTATTCATCTTCATCTCTCTCCTTGCCAAAGGGAGTTTGCAATGCTCAATGGGTAACTTAACAATCAGCCAAACTCCAACCGAGGCAATGGTAAATGGCAAAACAGAATGGAAAGTTACTATCACCAATGAATGCCAAAATTGCACTCAGTTCAATGTGAGATTGAAGTGTGGAGGTTTCAGCACAGTTGAAGCCATTAAACCCACCACCTTAGCCAAGTTGGGGTCTCAATGTGTGGTCAATGGTGGCTTTCCAATCTATTCTGCTGTTCCCATCACCTTCACTTATGCATGGGACCCTTCATTTGATTTCAGGCCTTTCTTCTCCCAAGTTGCTTGTGCCTAG

Protein sequence

MSPLMAVIFKIIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQFNVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSAVPITFTYAWDPSFDFRPFFSQVACA

Homology

[Close]

BLAST of Tan0000186 vs. ExPASy Swiss-Prot
Match: Q6TLJ2 (Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana OX=3702 GN=TPD1 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.8e-07
Identity = 31/103 (30.10%), Postives = 52/103 (50.49%), Query Frame = 0


Query: 27  QCSMGNLTISQTPTEAMVNGKTEWKVTITNECQN-CTQFNVRLKCGGFSTVEAIKPTTLA 86
           +C   ++ ++Q  TE M NG   + V ITN+C + C    + + CG FS+ + I P    
Sbjct: 76  KCKSTDIVVNQAVTEPMPNGIPGYMVEITNQCMSGCIISRIHINCGWFSSAKLINPRVFK 135

Query: 87  KLG-SQCVVNGGFPIYSAVPITFTYAWDPSFDFRPFFSQVACA 128
           ++    C+VN G P+     ++F YA   +F +    + V CA
Sbjct: 136 RIHYDDCLVNNGKPLPFGSTLSFHYA--NTFPYHLSVAFVTCA 176

[Close]

BLAST of Tan0000186 vs. NCBI nr
Match: XP_022141668.1 (TPD1 protein homolog 1-like [Momordica charantia])

HSP 1 Score: 187.2 bits (474), Expect = 8.8e-44
Identity = 90/126 (71.43%), Postives = 102/126 (80.95%), Query Frame = 0


Query: 2   SPLMAVIFKIIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNC 61
           S LMAVIFK I VFIF+SLLAKG   CSM +L I QTPT  MVNGK EW+V I+NEC+NC
Sbjct: 25  SLLMAVIFKAICVFIFLSLLAKGGWGCSMEDLAIRQTPTGEMVNGKREWRVRISNECKNC 84

Query: 62  TQFNVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSAVPITFTYAWDPSFDFRPFF 121
           TQ NVR KCGGF T +AIK T LAK+G+QCVVN G PIYS++PITFTYAWDP F+F PFF
Sbjct: 85  TQLNVRFKCGGFKTAKAIKLTILAKMGAQCVVNAGLPIYSSIPITFTYAWDPLFNFTPFF 144

Query: 122 SQVACA 128
           SQV C+
Sbjct: 145 SQVVCS 150

[Close]

BLAST of Tan0000186 vs. NCBI nr
Match: XP_038896903.1 (TPD1 protein homolog 1-like [Benincasa hispida])

HSP 1 Score: 130.6 bits (327), Expect = 9.8e-27
Identity = 61/123 (49.59%), Postives = 84/123 (68.29%), Query Frame = 0


Query: 5   MAVIFKIIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQF 64
           M    K + V  F  LL+KG  QCSM ++TISQ+ T   VNGK EW+ TITN C  C+Q+
Sbjct: 1   MVASIKFLCVLFFFCLLSKGKSQCSMNDITISQSTTGKEVNGKQEWRATITNNCV-CSQY 60

Query: 65  NVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSAVPITFTYAWDPSFDFRPFFSQV 124
           +V+  C GF++VE +  + L   GS+C+VN G P++ + PI+FTYAWD +F F+P FSQV
Sbjct: 61  SVKFDCNGFNSVEKVDESILMVAGSECLVNNGQPMFKSNPISFTYAWDNAFSFKPLFSQV 120

Query: 125 ACA 128
           AC+
Sbjct: 121 ACS 122

[Close]

BLAST of Tan0000186 vs. NCBI nr
Match: KGN60075.1 (hypothetical protein Csa_001952 [Cucumis sativus])

HSP 1 Score: 125.6 bits (314), Expect = 3.1e-25
Identity = 59/123 (47.97%), Postives = 82/123 (66.67%), Query Frame = 0


Query: 5   MAVIFKIIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQF 64
           M       Y+  F  LL+KG+ +CSM ++ ISQ+ T   VNGK EW+ TI N+C  C+Q+
Sbjct: 1   MVASINYFYLLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCV-CSQY 60

Query: 65  NVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSAVPITFTYAWDPSFDFRPFFSQV 124
           +V+  C GF+TVE +  + L   GS C+VN G PI+++ PI+FTYAWD +F F P FSQV
Sbjct: 61  SVKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPISFTYAWDNAFPFSPLFSQV 120

Query: 125 ACA 128
           AC+
Sbjct: 121 ACS 122

[Close]

BLAST of Tan0000186 vs. NCBI nr
Match: XP_038881121.1 (uncharacterized protein At1g05835-like [Benincasa hispida])

HSP 1 Score: 124.8 bits (312), Expect = 5.4e-25
Identity = 56/123 (45.53%), Postives = 86/123 (69.92%), Query Frame = 0


Query: 5   MAVIFKIIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQF 64
           MA+  K++   + +SL++ G+ QC + N+TISQ  T   ++G TEWKVTI+N C  C+Q 
Sbjct: 1   MAIFVKLVTALLVLSLVSTGNCQCILNNITISQRMTGFQIHGMTEWKVTISNNCP-CSQS 60

Query: 65  NVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSAVPITFTYAWDPSFDFRPFFSQV 124
            V++ C GF T E+I P+ LA   ++C+VN G PI+++ PITF+YA DP F+F+P  SQ+
Sbjct: 61  EVKIDCKGFQTTESIDPSILAVFDTECLVNNGLPIFNSNPITFSYAQDPQFNFKPISSQI 120

Query: 125 ACA 128
           +C+
Sbjct: 121 SCS 122

[Close]

BLAST of Tan0000186 vs. NCBI nr
Match: XP_022141896.1 (uncharacterized protein At1g05835-like [Momordica charantia])

HSP 1 Score: 124.8 bits (312), Expect = 5.4e-25
Identity = 57/123 (46.34%), Postives = 83/123 (67.48%), Query Frame = 0


Query: 5   MAVIFKIIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQF 64
           M    K++    F  LL+KG+ QCS+G+++I Q  TE  V G+ EW VT++N C  C+Q+
Sbjct: 1   MVASIKLLCALFFFCLLSKGNCQCSLGDISIKQEATEKRVGGQQEWLVTVSNNCV-CSQY 60

Query: 65  NVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSAVPITFTYAWDPSFDFRPFFSQV 124
           NV+L C GFS+ E +  + L   G++C++NGG PI+ + PI+FTYAWD  F F+P  SQV
Sbjct: 61  NVKLDCTGFSSEEIVDSSKLTNTGNECLINGGRPIFKSDPISFTYAWDLIFPFKPLSSQV 120

Query: 125 ACA 128
           AC+
Sbjct: 121 ACS 122

[Close]

BLAST of Tan0000186 vs. ExPASy TrEMBL
Match: A0A6J1CL63 (TPD1 protein homolog 1-like OS=Momordica charantia OX=3673 GN=LOC111011970 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 4.3e-44
Identity = 90/126 (71.43%), Postives = 102/126 (80.95%), Query Frame = 0


Query: 2   SPLMAVIFKIIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNC 61
           S LMAVIFK I VFIF+SLLAKG   CSM +L I QTPT  MVNGK EW+V I+NEC+NC
Sbjct: 25  SLLMAVIFKAICVFIFLSLLAKGGWGCSMEDLAIRQTPTGEMVNGKREWRVRISNECKNC 84

Query: 62  TQFNVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSAVPITFTYAWDPSFDFRPFF 121
           TQ NVR KCGGF T +AIK T LAK+G+QCVVN G PIYS++PITFTYAWDP F+F PFF
Sbjct: 85  TQLNVRFKCGGFKTAKAIKLTILAKMGAQCVVNAGLPIYSSIPITFTYAWDPLFNFTPFF 144

Query: 122 SQVACA 128
           SQV C+
Sbjct: 145 SQVVCS 150

[Close]

BLAST of Tan0000186 vs. ExPASy TrEMBL
Match: A0A0A0LDN0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G875990 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.5e-25
Identity = 59/123 (47.97%), Postives = 82/123 (66.67%), Query Frame = 0


Query: 5   MAVIFKIIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQF 64
           M       Y+  F  LL+KG+ +CSM ++ ISQ+ T   VNGK EW+ TI N+C  C+Q+
Sbjct: 1   MVASINYFYLLFFFCLLSKGNCECSMNDIEISQSTTGREVNGKQEWRATIRNKCV-CSQY 60

Query: 65  NVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSAVPITFTYAWDPSFDFRPFFSQV 124
           +V+  C GF+TVE +  + L   GS C+VN G PI+++ PI+FTYAWD +F F P FSQV
Sbjct: 61  SVKFDCNGFNTVEKVDESILMVAGSVCLVNNGQPIFNSSPISFTYAWDNAFPFSPLFSQV 120

Query: 125 ACA 128
           AC+
Sbjct: 121 ACS 122

[Close]

BLAST of Tan0000186 vs. ExPASy TrEMBL
Match: A0A6J1CKK7 (uncharacterized protein At1g05835-like OS=Momordica charantia OX=3673 GN=LOC111012144 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 2.6e-25
Identity = 57/123 (46.34%), Postives = 83/123 (67.48%), Query Frame = 0


Query: 5   MAVIFKIIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQF 64
           M    K++    F  LL+KG+ QCS+G+++I Q  TE  V G+ EW VT++N C  C+Q+
Sbjct: 1   MVASIKLLCALFFFCLLSKGNCQCSLGDISIKQEATEKRVGGQQEWLVTVSNNCV-CSQY 60

Query: 65  NVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSAVPITFTYAWDPSFDFRPFFSQV 124
           NV+L C GFS+ E +  + L   G++C++NGG PI+ + PI+FTYAWD  F F+P  SQV
Sbjct: 61  NVKLDCTGFSSEEIVDSSKLTNTGNECLINGGRPIFKSDPISFTYAWDLIFPFKPLSSQV 120

Query: 125 ACA 128
           AC+
Sbjct: 121 ACS 122

[Close]

BLAST of Tan0000186 vs. ExPASy TrEMBL
Match: A0A0A0LEA1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G875970 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.9e-24
Identity = 58/123 (47.15%), Postives = 83/123 (67.48%), Query Frame = 0


Query: 5   MAVIFKIIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQF 64
           M    K + V  F  LL+KG+ +C + ++ ISQT T ++V GK  WK TITN C  C Q 
Sbjct: 1   MVASIKFVCVLFFFCLLSKGNCECVLNDIAISQTTTGSIVQGKQVWKATITNNC-ICGQS 60

Query: 65  NVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSAVPITFTYAWDPSFDFRPFFSQV 124
           +++L C GF+TV+A+ P+ LA  GS C+VNGG PI+ + PI+FTYA D +F F+P  SQ+
Sbjct: 61  SLKLDCNGFNTVQAVDPSILAVSGSVCLVNGGQPIFQSTPISFTYASDNAFPFKPLSSQI 120

Query: 125 ACA 128
           +C+
Sbjct: 121 SCS 122

[Close]

BLAST of Tan0000186 vs. ExPASy TrEMBL
Match: A0A2G9I3S0 (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_02871 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.9e-23
Identity = 59/125 (47.20%), Postives = 81/125 (64.80%), Query Frame = 0


Query: 5   MAVIFKIIYVFIFISLLAKGSL--QCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCT 64
           MA I  I+ V +F+SL+++GSL  QC + +L I+Q PT   VN K EW  TI+N C  CT
Sbjct: 1   MASIINILCVILFVSLMSQGSLQQQCEIKDLKINQKPTGKNVNNKPEWTATISNNC-ICT 60

Query: 65  QFNVRLKCGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSAVPITFTYAWDPSFDFRPFFS 124
           Q NV+L C GF T E + P+ L+K G  C++N G PIY    I+F YAWD  F F+  +S
Sbjct: 61  QMNVQLSCKGFQTEEPVDPSLLSKSGDLCLINNGLPIYGFRSISFVYAWDAPFAFKTSYS 120

Query: 125 QVACA 128
           ++AC+
Sbjct: 121 EIACS 124

[Close]

BLAST of Tan0000186 vs. TAIR 10
Match: AT4G32110.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein )

HSP 1 Score: 90.1 bits (222), Expect = 1.4e-18
Identity = 43/117 (36.75%), Postives = 65/117 (55.56%), Query Frame = 0


Query: 10  KIIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQFNVRLK 69
           K++ + +F++ + +G   CS+ +L++ Q+ T  +V  K EW+V +TN C NC   N  L 
Sbjct: 7   KLLCLVLFLAFVNQGYGDCSLNSLSVKQSKTGKLVQNKPEWEVRVTNPCNNCKFQNTELL 66

Query: 70  CGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSAVPITFTYAWDPSFDFRPFFSQVAC 127
           C GF++V  I  + L K G  C+VN G  I   V I F Y WD SFD +     + C
Sbjct: 67  CVGFNSVTPIDTSLLLKSGDACLVNAGKFIVPHVDIVFKYVWDTSFDLKVIDGVMVC 123

[Close]

BLAST of Tan0000186 vs. TAIR 10
Match: AT4G32105.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein )

HSP 1 Score: 85.1 bits (209), Expect = 4.4e-17
Identity = 38/117 (32.48%), Postives = 63/117 (53.85%), Query Frame = 0


Query: 10  KIIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQFNVRLK 69
           K++ + +F++ + +G   C +  L++ Q+ T  +V  K EW+V +TN C NC     +L 
Sbjct: 7   KVLCLVLFLAFVNQGYGDCHLNYLSVKQSKTGKLVQNKPEWEVRVTNPCNNCKFQYTKLS 66

Query: 70  CGGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSAVPITFTYAWDPSFDFRPFFSQVAC 127
           C GF +V  +  + L+K G  C++N G  I+  V   F Y WD SFD +     + C
Sbjct: 67  CVGFQSVTPVATSLLSKSGDICLLNAGNFIFPHVDFVFNYVWDTSFDLKVIDGVIVC 123

[Close]

BLAST of Tan0000186 vs. TAIR 10
Match: AT4G32100.1 (Beta-1,3-N-Acetylglucosaminyltransferase family protein )

HSP 1 Score: 59.3 bits (142), Expect = 2.6e-09
Identity = 36/117 (30.77%), Postives = 58/117 (49.57%), Query Frame = 0


Query: 11  IIYVFIFISLLAKGSLQCSMGNLTISQTPTEAMVNGKTEWKVTITNECQNCTQFNVRLKC 70
           ++ +F F++    G    S+ +L++ Q+ T  MV  K EW+V + N    C   +  L C
Sbjct: 11  LVLLFAFVT-QGYGDDSYSLESLSVIQSKTGNMVENKPEWEVKVLNS-SPCYFTHTTLSC 70

Query: 71  GGFSTVEAIKPTTLAKLGSQCVVNGGFPIYSAVPITFTYAWDPSFDFRPFFSQVACA 128
             F +V  I    L+K G  C++  G  I+    I+F Y WD SFD +     +AC+
Sbjct: 71  VRFKSVTPIDSKVLSKSGDTCLLGNGDSIHD---ISFKYVWDTSFDLKVVDGYIACS 122

[Close]

BLAST of Tan0000186 vs. TAIR 10
Match: AT4G24972.1 (tapetum determinant 1 )

HSP 1 Score: 55.1 bits (131), Expect = 4.9e-08
Identity = 31/103 (30.10%), Postives = 52/103 (50.49%), Query Frame = 0


Query: 27  QCSMGNLTISQTPTEAMVNGKTEWKVTITNECQN-CTQFNVRLKCGGFSTVEAIKPTTLA 86
           +C   ++ ++Q  TE M NG   + V ITN+C + C    + + CG FS+ + I P    
Sbjct: 76  KCKSTDIVVNQAVTEPMPNGIPGYMVEITNQCMSGCIISRIHINCGWFSSAKLINPRVFK 135

Query: 87  KLG-SQCVVNGGFPIYSAVPITFTYAWDPSFDFRPFFSQVACA 128
           ++    C+VN G P+     ++F YA   +F +    + V CA
Sbjct: 136 RIHYDDCLVNNGKPLPFGSTLSFHYA--NTFPYHLSVAFVTCA 176

The following BLAST results are available for this feature:

BLAST of Tan0000186 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6TLJ2	6.8e-07	30.10	Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana OX=3702 GN=TPD1 PE=1 SV=1	[more]

BLAST of Tan0000186 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141668.1	8.8e-44	71.43	TPD1 protein homolog 1-like [Momordica charantia]	[more]
XP_038896903.1	9.8e-27	49.59	TPD1 protein homolog 1-like [Benincasa hispida]	[more]
KGN60075.1	3.1e-25	47.97	hypothetical protein Csa_001952 [Cucumis sativus]	[more]
XP_038881121.1	5.4e-25	45.53	uncharacterized protein At1g05835-like [Benincasa hispida]	[more]
XP_022141896.1	5.4e-25	46.34	uncharacterized protein At1g05835-like [Momordica charantia]	[more]

BLAST of Tan0000186 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CL63	4.3e-44	71.43	TPD1 protein homolog 1-like OS=Momordica charantia OX=3673 GN=LOC111011970 PE=4 ...	[more]
A0A0A0LDN0	1.5e-25	47.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G875990 PE=4 SV=1	[more]
A0A6J1CKK7	2.6e-25	46.34	uncharacterized protein At1g05835-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A0A0LEA1	2.9e-24	47.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G875970 PE=4 SV=1	[more]
A0A2G9I3S0	1.9e-23	47.20	Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_02871 P...	[more]

BLAST of Tan0000186 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32110.1	1.4e-18	36.75	Beta-1,3-N-Acetylglucosaminyltransferase family protein	[more]
AT4G32105.1	4.4e-17	32.48	Beta-1,3-N-Acetylglucosaminyltransferase family protein	[more]
AT4G32100.1	2.6e-09	30.77	Beta-1,3-N-Acetylglucosaminyltransferase family protein	[more]
AT4G24972.1	4.9e-08	30.10	tapetum determinant 1	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040361	Tapetum determinant 1	PANTHER	PTHR33184	PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED	coord: 5..126
None	No IPR available	PANTHER	PTHR33184:SF44	BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN	coord: 5..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0000186.1	Tan0000186.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane