Spg039924 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg039924
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	MRN complex-interacting protein isoform X1
Location	scaffold10: 40489547 .. 40490927 (+)
RNA-Seq Expression	Spg039924
Synteny	Spg039924

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGACGATCTTCATCGCCGTCCAGTGTTTCCAGTGCTGCACCATGCAGGCAGCGATCTCGTTCCGTCTCTCTCTGTTTCTCTTTTCCTTCTCTGTTTCTCTCTCTAACTGATGTAATGGCGGTGGTTTTGATTTAGGTGAAGCAGCAGAAGAGGAGTGGGAATAAGTGGATCTGTGCAGTGTGCAACGAGAAGCAATCGGTGCAGAAGGTGTTTGCTCGAGCTCCTATGGCTAAAGACGTCCGTAAGTTCGTACAGAGCTTCAACATGTCTAGAAAATATGCAGATGAACAGACCAAAGTCGATGAGCCACTCGATGGAGGAACTGTTGACGACGATCAGCTTGAATGTAGTGCAAGGAGGGAAAGACGCAGCGATTGGAGCGAGTACCTCGATCTCGAAGAAGATCGCATCCAAAGTGGAAAAGAAAACGAACGAGAATTAGGTCATTCATTTCGTAAATGCATTTTTATTACGATTCGTTTATCGAACCACTCGAAGTAAAATCTTCTTTAGATATTATTTTGTGGAGCAGGAAGTGATTCTAGCGACGGAAAGATTGTGACAGAATTTCCAGAAGTAAAAACCCGGAAATCTAGTTCCCCGAGCCGTCCAAGCTGGTCGGAAGATGGAGAAGGAGATGGATTTTACAGACCAGTTTTCAAAAAGAGGAAGAACATCGCCAAGAATTCGAGCTCCAAAGGTAAAATTTGGAGATGATCCTAATACTTTAACTTTTTCTGTTGAGCAAAAACGGCCAAAATTGCAGATGATATTCAAAACTGGGAGTCGCCATCGGCCATTCACGCATCAAAATGGAGTAAAGGCATCTCGGAAGACGATGAAAAAGTTCTCCCGAAGAGAAAACACATCGCCGAGCATTCAAGCTCCCAAGGTAAAGCTCTAAGATAATCCTAATACTCTTCTTGCACATTTCCAAACAAAAAAATTGACTAGAAACAGCAATAAATTGCAGACGAGATTCGAAAATGGGAATCGCCATCAGCCATTCACGCATCAAAATGGAGCAAGAGCGTCTTTGAAGACAAAGAAAATGAAAGGACGAAAACTTGCATCATGGCGAAGGTAAAAGGACCTTCCAAGTGGAGCGAATACATCACTGAAGAAGACAACAGCGGGACCAGAAATGGAGAAAATATGGCAACAGAACAAGGCATGGACTTGAAGATGATGATTAATGATGAAATGGTTGAAGATGATATCCACCCTGATTTCAAATGACAATGACTCGAGATGAATAATAAGAATGTTCTATCGTTTAAACGATAAATAGCCGTTAAATCTTTAATGGTGATCAACAAGCATTATTCCATGAAGATATATATATATATACCCGAGCAAGATCTTCCAAATATCCTG

mRNA sequence

ATGTCGACGATCTTCATCGCCGTGAAGCAGCAGAAGAGGAGTGGGAATAAGTGGATCTGTGCAGTGTGCAACGAGAAGCAATCGGTGCAGAAGGTGTTTGCTCGAGCTCCTATGGCTAAAGACGTCCGTAAGTTCGTACAGAGCTTCAACATGTCTAGAAAATATGCAGATGAACAGACCAAAGTCGATGAGCCACTCGATGGAGGAACTGTTGACGACGATCAGCTTGAATGTAGTGCAAGGAGGGAAAGACGCAGCGATTGGAGCGAGTACCTCGATCTCGAAGAAGATCGCATCCAAAGTGGAAAAGAAAACGAACGAGAATTAGGAAGTGATTCTAGCGACGGAAAGATTGTGACAGAATTTCCAGAAGTAAAAACCCGGAAATCTAGTTCCCCGAGCCGTCCAAGCTGGTCGGAAGATGGAGAAGGAGATGGATTTTACAGACCAGTTTTCAAAAAGAGGAAGAACATCGCCAAGAATTCGAGCTCCAAAGATGATATTCAAAACTGGGAGTCGCCATCGGCCATTCACGCATCAAAATGGAGTAAAGGCATCTCGGAAGACGATGAAAAAGTTCTCCCGAAGAGAAAACACATCGCCGAGCATTCAAGCTCCCAAGACGAGATTCGAAAATGGGAATCGCCATCAGCCATTCACGCATCAAAATGGAGCAAGAGCGTCTTTGAAGACAAAGAAAATGAAAGGACGAAAACTTGCATCATGGCGAAGGTAAAAGGACCTTCCAAGTGGAGCGAATACATCACTGAAGAAGACAACAGCGGGACCAGAAATGGAGAAAATATGGCAACAGAACAAGGCATGGACTTGAAGATGATGATTAATGATGAAATGGTTGAAGATGATATCCACCCTGATTTCAAATGA

Coding sequence (CDS)

ATGTCGACGATCTTCATCGCCGTGAAGCAGCAGAAGAGGAGTGGGAATAAGTGGATCTGTGCAGTGTGCAACGAGAAGCAATCGGTGCAGAAGGTGTTTGCTCGAGCTCCTATGGCTAAAGACGTCCGTAAGTTCGTACAGAGCTTCAACATGTCTAGAAAATATGCAGATGAACAGACCAAAGTCGATGAGCCACTCGATGGAGGAACTGTTGACGACGATCAGCTTGAATGTAGTGCAAGGAGGGAAAGACGCAGCGATTGGAGCGAGTACCTCGATCTCGAAGAAGATCGCATCCAAAGTGGAAAAGAAAACGAACGAGAATTAGGAAGTGATTCTAGCGACGGAAAGATTGTGACAGAATTTCCAGAAGTAAAAACCCGGAAATCTAGTTCCCCGAGCCGTCCAAGCTGGTCGGAAGATGGAGAAGGAGATGGATTTTACAGACCAGTTTTCAAAAAGAGGAAGAACATCGCCAAGAATTCGAGCTCCAAAGATGATATTCAAAACTGGGAGTCGCCATCGGCCATTCACGCATCAAAATGGAGTAAAGGCATCTCGGAAGACGATGAAAAAGTTCTCCCGAAGAGAAAACACATCGCCGAGCATTCAAGCTCCCAAGACGAGATTCGAAAATGGGAATCGCCATCAGCCATTCACGCATCAAAATGGAGCAAGAGCGTCTTTGAAGACAAAGAAAATGAAAGGACGAAAACTTGCATCATGGCGAAGGTAAAAGGACCTTCCAAGTGGAGCGAATACATCACTGAAGAAGACAACAGCGGGACCAGAAATGGAGAAAATATGGCAACAGAACAAGGCATGGACTTGAAGATGATGATTAATGATGAAATGGTTGAAGATGATATCCACCCTGATTTCAAATGA

Protein sequence

MSTIFIAVKQQKRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQTKVDEPLDGGTVDDDQLECSARRERRSDWSEYLDLEEDRIQSGKENERELGSDSSDGKIVTEFPEVKTRKSSSPSRPSWSEDGEGDGFYRPVFKKRKNIAKNSSSKDDIQNWESPSAIHASKWSKGISEDDEKVLPKRKHIAEHSSSQDEIRKWESPSAIHASKWSKSVFEDKENERTKTCIMAKVKGPSKWSEYITEEDNSGTRNGENMATEQGMDLKMMINDEMVEDDIHPDFK

Homology

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BLAST of Spg039924 vs. NCBI nr
Match: XP_038885326.1 (MRN complex-interacting protein [Benincasa hispida])

HSP 1 Score: 371.7 bits (953), Expect = 5.9e-99
Identity = 204/317 (64.35%), Postives = 243/317 (76.66%), Query Frame = 0


Query: 1   MSTIFIA----------VKQQKRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60
           M+TIFIA          VKQQ++SGN+WICAVCNEKQS+QKVFARA MAKDVRKFVQ+FN
Sbjct: 1   MATIFIAVQCFQCSTMQVKQQRKSGNRWICAVCNEKQSLQKVFARASMAKDVRKFVQNFN 60

Query: 61  MSRKYADEQTKVDEPLDGGTVDDDQLECSARRERRSDWSEYLDLEEDRIQSGKENERELG 120
           MSRKYADEQ K DE LDGG VD+D+L+CSARR+RR+DWSEYLD EEDR  +G+ENE EL 
Sbjct: 61  MSRKYADEQAKADELLDGGIVDEDKLDCSARRKRRNDWSEYLDPEEDRSHNGRENEGELE 120

Query: 121 SDSSDGKIVTEFPEVKTRKSSSPSRPSWSEDGEGDGFYRPVFKKRKNIAKNSSSKDDIQN 180
           S+S+D KIVTE PEVKTRKS S S   WSE GEGDGFYRP+F KRK+IA N SS+D+++N
Sbjct: 121 SESTDEKIVTEIPEVKTRKSGSTSCSRWSE-GEGDGFYRPIFSKRKHIANNLSSQDEVRN 180

Query: 181 WESPSAIHASKWSKGISEDDEKVLPKRKHIAEHSSSQ----------DEIRKWESPSAIH 240
           WES S I   KWSKG   +DE+++ K K+++     +          DEI+ WE  S I 
Sbjct: 181 WESTSTIQTMKWSKG---NDEQIISKAKNLSAPFQDKKMSKNSHKIADEIQNWELQSEIE 240

Query: 241 ASKWSKSVFEDKENERTKTCIMAKVKGP-SKWSEYITEEDNSGTRNGENMATEQGMD-LK 296
           ASK SK + +D EN RTKT I+AKV+GP SKWSEYITEEDN   RNGENMAT+Q +D LK
Sbjct: 241 ASKGSKDMSKDDENSRTKTSILAKVRGPSSKWSEYITEEDNCRGRNGENMATDQCIDILK 300

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BLAST of Spg039924 vs. NCBI nr
Match: XP_004141004.1 (MRN complex-interacting protein [Cucumis sativus] >KGN46102.1 hypothetical protein Csa_005258 [Cucumis sativus])

HSP 1 Score: 369.4 bits (947), Expect = 2.9e-98
Identity = 208/317 (65.62%), Postives = 239/317 (75.39%), Query Frame = 0


Query: 1   MSTIFIA----------VKQQKRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60
           M+TIFIA          VKQQ++SGNKWICAVCN+KQSVQKVFARAPMAKDVRKFVQSFN
Sbjct: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNQKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYADEQTKVDEPLDGGTVDDDQLECSARRERRSDWSEYLDLEEDRIQSGKENERELG 120
           MSRKYA+EQ  VDE +DGG VDDD+L CS RR+ RSDWS+YLD  EDR  SG+ENE EL 
Sbjct: 61  MSRKYANEQANVDELIDGGIVDDDKLVCSGRRKSRSDWSDYLDPVEDRSHSGRENEVEL- 120

Query: 121 SDSSDGKIVTEFPEVKTRKSSSPSRPSWSEDGEGDGFYRPVFKKRKNIAKNSSSKDDIQN 180
              SD KIVTE P++KT KS S S  SWSE+GEGDG YRP+F KRK+IA N SS+D+I+N
Sbjct: 121 --ESDLKIVTELPDIKTWKSGSRSCSSWSEEGEGDGLYRPLFSKRKHIANNLSSQDEIRN 180

Query: 181 WESPSAIHASKWSKGISEDDEKVLPKRKHIA----------EHSSSQDEIRKWESPSAIH 240
           WESPSAIHASK SKG   DDE+ L   K+++               +DEI+ WE PS I 
Sbjct: 181 WESPSAIHASKLSKG---DDEQTLSTAKYLSAPFQDKKMGKNGHKVEDEIQNWELPSEIE 240

Query: 241 ASKWSKSVFEDKENERTKTCIMAKVKG-PSKWSEYITEEDNSGTRNGENMATEQGMD-LK 296
           ASKWSK    D EN RTK+CI+ KV+G  SKWSEYITEE+N G RN ENMA E+GMD LK
Sbjct: 241 ASKWSK----DDENLRTKSCILGKVRGASSKWSEYITEEENCGGRNEENMAREEGMDVLK 300

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BLAST of Spg039924 vs. NCBI nr
Match: XP_008456719.1 (PREDICTED: UPF0544 protein C5orf45 homolog [Cucumis melo] >KAA0031637.1 UPF0544 protein C5orf45-like protein [Cucumis melo var. makuwa] >TYK04473.1 UPF0544 protein C5orf45-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 366.7 bits (940), Expect = 1.9e-97
Identity = 205/316 (64.87%), Postives = 235/316 (74.37%), Query Frame = 0


Query: 1   MSTIFIA----------VKQQKRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60
           M+TIFIA          VKQQ++SGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN
Sbjct: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYADEQTKVDEPLDGGTVDDDQLECSARRERRSDWSEYLDLEEDRIQSGKENERELG 120
           MSRKYA+EQ  VD+ + GG VDDD+L+CS RR+RR+DWSEYLD EEDR  SG+ENE EL 
Sbjct: 61  MSRKYANEQANVDDLIHGGIVDDDKLDCSGRRKRRNDWSEYLDPEEDRSHSGRENEGEL- 120

Query: 121 SDSSDGKIVTEFPEVKTRKSSSPSRPSWSEDGEGDGFYRPVFKKRKNIAKNSSSKDDIQN 180
              SD KI TE P++KT KS S S  SWSE GEGDG YRP+F KRK+IAKN SS+D+IQN
Sbjct: 121 --ESDLKIATELPDIKTWKSGSRSCSSWSE-GEGDGLYRPLFSKRKHIAKNLSSQDEIQN 180

Query: 181 WESPSAIHASKWSKGISEDDEKVLPKRKHIA----------EHSSSQDEIRKWESPSAIH 240
           WESPSAIH SK SKG   DDE+     K+++               + EI+ WE PS I 
Sbjct: 181 WESPSAIHTSKLSKG---DDEQTFSTAKYLSAPFQDKKMSKNSHKVESEIQNWELPSEIE 240

Query: 241 ASKWSKSVFEDKENERTKTCIMAKVKG-PSKWSEYITEEDNSGTRNGENMATEQGMDLKM 296
           ASKW+K    D EN RTK+CI+ KV+G  SKWSEYITEE+N G RN ENMA EQGMD+  
Sbjct: 241 ASKWTK----DDENSRTKSCILGKVRGASSKWSEYITEEENCGGRNEENMAREQGMDILK 300

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BLAST of Spg039924 vs. NCBI nr
Match: XP_023549686.1 (MRN complex-interacting protein isoform X2 [Cucurbita pepo subsp. pepo] >XP_023549687.1 MRN complex-interacting protein isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 352.4 bits (903), Expect = 3.7e-93
Identity = 206/307 (67.10%), Postives = 227/307 (73.94%), Query Frame = 0


Query: 1   MSTIFIA----------VKQQKRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60
           MSTIFIA          VKQQ+RSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN
Sbjct: 1   MSTIFIAVQCFQCSTMQVKQQRRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYADEQTKVDEPLDGGTVDDDQLECSARRERRSDWSEYLDLEEDRIQSGKENERELG 120
           MSRKYADEQTKVDE LD   VD+DQL+ +A+R+RRSDWSEYLDLEEDR Q+G+ENERELG
Sbjct: 61  MSRKYADEQTKVDEILDEEIVDEDQLDFNAKRKRRSDWSEYLDLEEDRSQTGRENERELG 120

Query: 121 SDSSDGKIVTEFPEVKTRKSSSPSRPSWSEDGEGDGFYRPVFKKRKNIAKNSSSKDDIQN 180
           SD +DGKIVTE PE KTRK  S S  S  E GEG  FYRPVF KR +IAKN         
Sbjct: 121 SDFTDGKIVTELPEEKTRKHCSTSCSSRPEGGEGKRFYRPVFPKRTHIAKN--------- 180

Query: 181 WESPSAIHASKWSKGISEDDEKVLPKRKHIAEHSSSQDEIRKWESPSAIHASKWSKSVFE 240
               SAI ASKW KG+ EDDEKV      +  + SS+DEIR WES S I ASKWSK + +
Sbjct: 181 ----SAIQASKWRKGVREDDEKV-----SLKANLSSKDEIRNWESQSDIEASKWSKGMSK 240

Query: 241 DKENERTKTCIMAKVKGPS-KWSEYITEEDNSGTRNGENMATEQGMD-LKMMINDEMVED 296
           D EN     CI+AKV GPS KWSEY+TEED       +NM TEQ MD LKM+INDE+VED
Sbjct: 241 DDEN----ACILAKVGGPSPKWSEYMTEED-------KNMGTEQDMDTLKMIINDEIVED 278

[Close]

BLAST of Spg039924 vs. NCBI nr
Match: XP_022939429.1 (MRN complex-interacting protein isoform X1 [Cucurbita moschata])

HSP 1 Score: 349.7 bits (896), Expect = 2.4e-92
Identity = 205/307 (66.78%), Postives = 224/307 (72.96%), Query Frame = 0


Query: 1   MSTIFIA----------VKQQKRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60
           MSTIFIA          VKQQ+RSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN
Sbjct: 1   MSTIFIAVQCFQCSTMQVKQQRRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYADEQTKVDEPLDGGTVDDDQLECSARRERRSDWSEYLDLEEDRIQSGKENERELG 120
           MSRKYADEQTKVDE LD   VD+DQL+ +A+R+RRSDWSEYLDLEEDR Q+G+ENERELG
Sbjct: 61  MSRKYADEQTKVDEILDEEIVDEDQLDFNAKRKRRSDWSEYLDLEEDRSQTGRENERELG 120

Query: 121 SDSSDGKIVTEFPEVKTRKSSSPSRPSWSEDGEGDGFYRPVFKKRKNIAKNSSSKDDIQN 180
           SD +DGK VTE PE KTRK  S S  S  E  EG  FYRPVF KR +IAKN         
Sbjct: 121 SDFADGKFVTELPEEKTRKHCSTSCSSRPEGVEGKRFYRPVFPKRTHIAKN--------- 180

Query: 181 WESPSAIHASKWSKGISEDDEKVLPKRKHIAEHSSSQDEIRKWESPSAIHASKWSKSVFE 240
               SAI ASKW KG+ EDDEKV  K KH   H SS+DEIR WESPS+            
Sbjct: 181 ----SAIQASKWRKGVREDDEKVSLKAKH---HLSSKDEIRNWESPSS------------ 240

Query: 241 DKENERTKTCIMAKVKGP-SKWSEYITEEDNSGTRNGENMATEQGMD-LKMMINDEMVED 296
            K++E    CI+AKV GP SKWSEYITE+DN G R GENM TEQ MD LKM+ NDE+VED
Sbjct: 241 -KDDE--SACILAKVGGPSSKWSEYITEDDNCGGRKGENMGTEQDMDTLKMITNDEIVED 276

[Close]

BLAST of Spg039924 vs. ExPASy TrEMBL
Match: A0A0A0KCJ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052770 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 1.4e-98
Identity = 208/317 (65.62%), Postives = 239/317 (75.39%), Query Frame = 0


Query: 1   MSTIFIA----------VKQQKRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60
           M+TIFIA          VKQQ++SGNKWICAVCN+KQSVQKVFARAPMAKDVRKFVQSFN
Sbjct: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNQKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYADEQTKVDEPLDGGTVDDDQLECSARRERRSDWSEYLDLEEDRIQSGKENERELG 120
           MSRKYA+EQ  VDE +DGG VDDD+L CS RR+ RSDWS+YLD  EDR  SG+ENE EL 
Sbjct: 61  MSRKYANEQANVDELIDGGIVDDDKLVCSGRRKSRSDWSDYLDPVEDRSHSGRENEVEL- 120

Query: 121 SDSSDGKIVTEFPEVKTRKSSSPSRPSWSEDGEGDGFYRPVFKKRKNIAKNSSSKDDIQN 180
              SD KIVTE P++KT KS S S  SWSE+GEGDG YRP+F KRK+IA N SS+D+I+N
Sbjct: 121 --ESDLKIVTELPDIKTWKSGSRSCSSWSEEGEGDGLYRPLFSKRKHIANNLSSQDEIRN 180

Query: 181 WESPSAIHASKWSKGISEDDEKVLPKRKHIA----------EHSSSQDEIRKWESPSAIH 240
           WESPSAIHASK SKG   DDE+ L   K+++               +DEI+ WE PS I 
Sbjct: 181 WESPSAIHASKLSKG---DDEQTLSTAKYLSAPFQDKKMGKNGHKVEDEIQNWELPSEIE 240

Query: 241 ASKWSKSVFEDKENERTKTCIMAKVKG-PSKWSEYITEEDNSGTRNGENMATEQGMD-LK 296
           ASKWSK    D EN RTK+CI+ KV+G  SKWSEYITEE+N G RN ENMA E+GMD LK
Sbjct: 241 ASKWSK----DDENLRTKSCILGKVRGASSKWSEYITEEENCGGRNEENMAREEGMDVLK 300

[Close]

BLAST of Spg039924 vs. ExPASy TrEMBL
Match: A0A5D3BXL1 (UPF0544 protein C5orf45-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00830 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 9.1e-98
Identity = 205/316 (64.87%), Postives = 235/316 (74.37%), Query Frame = 0


Query: 1   MSTIFIA----------VKQQKRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60
           M+TIFIA          VKQQ++SGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN
Sbjct: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYADEQTKVDEPLDGGTVDDDQLECSARRERRSDWSEYLDLEEDRIQSGKENERELG 120
           MSRKYA+EQ  VD+ + GG VDDD+L+CS RR+RR+DWSEYLD EEDR  SG+ENE EL 
Sbjct: 61  MSRKYANEQANVDDLIHGGIVDDDKLDCSGRRKRRNDWSEYLDPEEDRSHSGRENEGEL- 120

Query: 121 SDSSDGKIVTEFPEVKTRKSSSPSRPSWSEDGEGDGFYRPVFKKRKNIAKNSSSKDDIQN 180
              SD KI TE P++KT KS S S  SWSE GEGDG YRP+F KRK+IAKN SS+D+IQN
Sbjct: 121 --ESDLKIATELPDIKTWKSGSRSCSSWSE-GEGDGLYRPLFSKRKHIAKNLSSQDEIQN 180

Query: 181 WESPSAIHASKWSKGISEDDEKVLPKRKHIA----------EHSSSQDEIRKWESPSAIH 240
           WESPSAIH SK SKG   DDE+     K+++               + EI+ WE PS I 
Sbjct: 181 WESPSAIHTSKLSKG---DDEQTFSTAKYLSAPFQDKKMSKNSHKVESEIQNWELPSEIE 240

Query: 241 ASKWSKSVFEDKENERTKTCIMAKVKG-PSKWSEYITEEDNSGTRNGENMATEQGMDLKM 296
           ASKW+K    D EN RTK+CI+ KV+G  SKWSEYITEE+N G RN ENMA EQGMD+  
Sbjct: 241 ASKWTK----DDENSRTKSCILGKVRGASSKWSEYITEEENCGGRNEENMAREQGMDILK 300

[Close]

BLAST of Spg039924 vs. ExPASy TrEMBL
Match: A0A1S3C3H7 (UPF0544 protein C5orf45 homolog OS=Cucumis melo OX=3656 GN=LOC103496578 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 9.1e-98
Identity = 205/316 (64.87%), Postives = 235/316 (74.37%), Query Frame = 0


Query: 1   MSTIFIA----------VKQQKRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60
           M+TIFIA          VKQQ++SGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN
Sbjct: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYADEQTKVDEPLDGGTVDDDQLECSARRERRSDWSEYLDLEEDRIQSGKENERELG 120
           MSRKYA+EQ  VD+ + GG VDDD+L+CS RR+RR+DWSEYLD EEDR  SG+ENE EL 
Sbjct: 61  MSRKYANEQANVDDLIHGGIVDDDKLDCSGRRKRRNDWSEYLDPEEDRSHSGRENEGEL- 120

Query: 121 SDSSDGKIVTEFPEVKTRKSSSPSRPSWSEDGEGDGFYRPVFKKRKNIAKNSSSKDDIQN 180
              SD KI TE P++KT KS S S  SWSE GEGDG YRP+F KRK+IAKN SS+D+IQN
Sbjct: 121 --ESDLKIATELPDIKTWKSGSRSCSSWSE-GEGDGLYRPLFSKRKHIAKNLSSQDEIQN 180

Query: 181 WESPSAIHASKWSKGISEDDEKVLPKRKHIA----------EHSSSQDEIRKWESPSAIH 240
           WESPSAIH SK SKG   DDE+     K+++               + EI+ WE PS I 
Sbjct: 181 WESPSAIHTSKLSKG---DDEQTFSTAKYLSAPFQDKKMSKNSHKVESEIQNWELPSEIE 240

Query: 241 ASKWSKSVFEDKENERTKTCIMAKVKG-PSKWSEYITEEDNSGTRNGENMATEQGMDLKM 296
           ASKW+K    D EN RTK+CI+ KV+G  SKWSEYITEE+N G RN ENMA EQGMD+  
Sbjct: 241 ASKWTK----DDENSRTKSCILGKVRGASSKWSEYITEEENCGGRNEENMAREQGMDILK 300

[Close]

BLAST of Spg039924 vs. ExPASy TrEMBL
Match: A0A6J1FH51 (MRN complex-interacting protein isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445345 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 1.2e-92
Identity = 205/307 (66.78%), Postives = 224/307 (72.96%), Query Frame = 0


Query: 1   MSTIFIA----------VKQQKRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60
           MSTIFIA          VKQQ+RSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN
Sbjct: 1   MSTIFIAVQCFQCSTMQVKQQRRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYADEQTKVDEPLDGGTVDDDQLECSARRERRSDWSEYLDLEEDRIQSGKENERELG 120
           MSRKYADEQTKVDE LD   VD+DQL+ +A+R+RRSDWSEYLDLEEDR Q+G+ENERELG
Sbjct: 61  MSRKYADEQTKVDEILDEEIVDEDQLDFNAKRKRRSDWSEYLDLEEDRSQTGRENERELG 120

Query: 121 SDSSDGKIVTEFPEVKTRKSSSPSRPSWSEDGEGDGFYRPVFKKRKNIAKNSSSKDDIQN 180
           SD +DGK VTE PE KTRK  S S  S  E  EG  FYRPVF KR +IAKN         
Sbjct: 121 SDFADGKFVTELPEEKTRKHCSTSCSSRPEGVEGKRFYRPVFPKRTHIAKN--------- 180

Query: 181 WESPSAIHASKWSKGISEDDEKVLPKRKHIAEHSSSQDEIRKWESPSAIHASKWSKSVFE 240
               SAI ASKW KG+ EDDEKV  K KH   H SS+DEIR WESPS+            
Sbjct: 181 ----SAIQASKWRKGVREDDEKVSLKAKH---HLSSKDEIRNWESPSS------------ 240

Query: 241 DKENERTKTCIMAKVKGP-SKWSEYITEEDNSGTRNGENMATEQGMD-LKMMINDEMVED 296
            K++E    CI+AKV GP SKWSEYITE+DN G R GENM TEQ MD LKM+ NDE+VED
Sbjct: 241 -KDDE--SACILAKVGGPSSKWSEYITEDDNCGGRKGENMGTEQDMDTLKMITNDEIVED 276

[Close]

BLAST of Spg039924 vs. ExPASy TrEMBL
Match: A0A6J1JWE4 (MRN complex-interacting protein isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488952 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 7.5e-92
Identity = 203/306 (66.34%), Postives = 221/306 (72.22%), Query Frame = 0


Query: 1   MSTIFIA----------VKQQKRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60
           MSTIFIA          VKQQ+RSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN
Sbjct: 1   MSTIFIAVQCFQCSTMQVKQQRRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYADEQTKVDEPLDGGTVDDDQLECSARRERRSDWSEYLDLEEDRIQSGKENERELG 120
           MSRKYADEQTKVDE  D   VD+DQL+ + +R+RRSDWSEYLDLEEDR Q+G+ENERELG
Sbjct: 61  MSRKYADEQTKVDEIFDEEIVDEDQLDFNEKRKRRSDWSEYLDLEEDRSQTGRENERELG 120

Query: 121 SDSSDGKIVTEFPEVKTRKSSSPSRPSWSEDGEGDGFYRPVFKKRKNIAKNSSSKDDIQN 180
           SD +DGKIVTE PE KTRK  S S  +  E GEG  FYRPVF KR +IAKN         
Sbjct: 121 SDFADGKIVTELPEEKTRKHCSTSCSNRPESGEGKIFYRPVFPKRTHIAKN--------- 180

Query: 181 WESPSAIHASKWSKGISEDDEKVLPKRKHIAEHSSSQDEIRKWESPSAIHASKWSKSVFE 240
               SAI ASKWSKG+ EDDEKV  K KH   H SS+DEIR WES S            +
Sbjct: 181 ----SAIQASKWSKGVREDDEKVSLKAKH---HLSSKDEIRNWESLST-----------K 240

Query: 241 DKENERTKTCIMAKVKGPSKWSEYITEEDNSGTRNGENMATEQGMD-LKMMINDEMVEDD 296
           D EN        +KV GPSKWSEYITE+DN G R GENM TEQ MD LKM+INDE+VEDD
Sbjct: 241 DDEN------ACSKVGGPSKWSEYITEDDNCGGRKGENMGTEQDMDTLKMIINDEIVEDD 273

[Close]

BLAST of Spg039924 vs. TAIR 10
Match: AT1G71760.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 84 Blast hits to 84 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 107.8 bits (268), Expect = 1.5e-23
Identity = 100/315 (31.75%), Postives = 150/315 (47.62%), Query Frame = 0


Query: 2   STIFIA----------VKQQKRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNM 61
           ST+FIA          VKQ+K+S NKW+C +CN+KQSV+KVFA+   AK++R FVQSFNM
Sbjct: 3   STLFIALQCYECSTMQVKQKKKSSNKWVCVICNQKQSVKKVFAQGYKAKELRFFVQSFNM 62

Query: 62  SRKYADEQT-KVDEPLDGGTVDDDQLECSARRERRSDWSEYLDLEEDRIQSGKENERELG 121
           SRK ADE+   V +      V+ +  E     ++RSDWS+YLD +         + R L 
Sbjct: 63  SRKVADEEAHAVGDSFPEVYVEGEVNEEVNGTKKRSDWSQYLDFD------SVNDRRRLA 122

Query: 122 SDSSDGKIVTEFP-----EVKTRKSSSPSRPSWSEDGE---GDGFYRPVFKKRKNIAKNS 181
            +  D KIVTE P       K  K S+    S +  GE    +  ++P F +R      S
Sbjct: 123 GEEDDVKIVTEMPSNMFKRPKLNKESNAGGSSSNTGGENKDSNEIFKPSFSRR------S 182

Query: 182 SSKDDIQNWESPSAIHASKWSKGISEDDEKVLPKRKHIAEHSSSQDEIRKWESPSAIHAS 241
             K D ++ +  SA +    S   S +   V+ ++K + E +   + + K        AS
Sbjct: 183 IKKPDFRSGKRSSATYVGHISAFSSNE---VVTRKKDMEERNLESERVTK-------PAS 242

Query: 242 KWSKSVFEDKENERTKTCIMAKVKGPSKWSEYITEEDNSGTRNGENMATEQGMDLKMM-I 295
           KW   + +D+   +           P    +   ++D  G           G D  +M I
Sbjct: 243 KWDAYLIDDEGEHQAP---------PRFGVKKALKDDEVG-----------GWDRAVMEI 275

[Close]

BLAST of Spg039924 vs. TAIR 10
Match: AT1G71760.1 (unknown protein; Has 92 Blast hits to 92 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 44; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). )

HSP 1 Score: 105.1 bits (261), Expect = 9.5e-23
Identity = 98/310 (31.61%), Postives = 144/310 (46.45%), Query Frame = 0


Query: 2   STIFIA----------VKQQKRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFNM 61
           ST+FIA          VKQ+K+S NKW+C +CN+KQSV+KVFA+   AK++R FVQSFNM
Sbjct: 3   STLFIALQCYECSTMQVKQKKKSSNKWVCVICNQKQSVKKVFAQGYKAKELRFFVQSFNM 62

Query: 62  SRKYADEQT-KVDEPLDGGTVDDDQLECSARRERRSDWSEYLDLEEDRIQSGKENERELG 121
           SRK ADE+   V +      V+ +  E     ++RSDWS+YLD +         + R L 
Sbjct: 63  SRKVADEEAHAVGDSFPEVYVEGEVNEEVNGTKKRSDWSQYLDFD------SVNDRRRLA 122

Query: 122 SDSSDGKIVTEFPEVKTRKSSSPSRPSWSEDGEGDGFYRPVFKKRKNIAKNSSSKDDIQN 181
            +  D KIVTE P                     + F RP   K  N A  SSS    +N
Sbjct: 123 GEEDDVKIVTEMP--------------------SNMFKRPKLNKESN-AGGSSSNTGGEN 182

Query: 182 WESPSAIHASKWSKGISEDD---EKVLPKRKHIAEHSSSQDEIRKWESPSAIHASKWSKS 241
            +S      S   + I + D   ++V+ ++K + E +   + + K        ASKW   
Sbjct: 183 KDSNEIFKPSFSRRSIKKPDFRSDEVVTRKKDMEERNLESERVTK-------PASKWDAY 242

Query: 242 VFEDKENERTKTCIMAKVKGPSKWSEYITEEDNSGTRNGENMATEQGMDLKMM-INDE-- 295
           + +D+   +           P    +   ++D  G           G D  +M IN E  
Sbjct: 243 LIDDEGEHQAP---------PRFGVKKALKDDEVG-----------GWDRAVMEINTEYQ 258

The following BLAST results are available for this feature:

BLAST of Spg039924 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885326.1	5.9e-99	64.35	MRN complex-interacting protein [Benincasa hispida]	[more]
XP_004141004.1	2.9e-98	65.62	MRN complex-interacting protein [Cucumis sativus] >KGN46102.1 hypothetical prote...	[more]
XP_008456719.1	1.9e-97	64.87	PREDICTED: UPF0544 protein C5orf45 homolog [Cucumis melo] >KAA0031637.1 UPF0544 ...	[more]
XP_023549686.1	3.7e-93	67.10	MRN complex-interacting protein isoform X2 [Cucurbita pepo subsp. pepo] >XP_0235...	[more]
XP_022939429.1	2.4e-92	66.78	MRN complex-interacting protein isoform X1 [Cucurbita moschata]	[more]

BLAST of Spg039924 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg039924 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCJ3	1.4e-98	65.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052770 PE=4 SV=1	[more]
A0A5D3BXL1	9.1e-98	64.87	UPF0544 protein C5orf45-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3C3H7	9.1e-98	64.87	UPF0544 protein C5orf45 homolog OS=Cucumis melo OX=3656 GN=LOC103496578 PE=4 SV=...	[more]
A0A6J1FH51	1.2e-92	66.78	MRN complex-interacting protein isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1JWE4	7.5e-92	66.34	MRN complex-interacting protein isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of Spg039924 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71760.2	1.5e-23	31.75	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G71760.1	9.5e-23	31.61	unknown protein; Has 92 Blast hits to 92 proteins in 41 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032739	MRN complex-interacting protein	PFAM	PF15749	MRNIP	coord: 7..91 e-value: 2.0E-12 score: 47.8
IPR032739	MRN complex-interacting protein	PANTHER	PTHR15863	MRN COMPLEX-INTERACTING PROTEIN	coord: 8..294
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..124
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..221
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg039924.1	Spg039924.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007095	mitotic G2 DNA damage checkpoint signaling
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003682	chromatin binding