Spg039901 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg039901
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCRM domain-containing protein
Locationscaffold10: 46613708 .. 46617295 (+)
RNA-Seq ExpressionSpg039901
SyntenySpg039901
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GATTCATTGTTTGGAGTCGTTTCTCTGATTAGAAATGTGTCATATTTATCTTTATTGAACATACCCACATCATTTGGGCAGTTCTCATATGGAAGTTGTGAGCTTGAAAGAAGTAATCATATTGCAAGGTCTCCCCAGGAATCAACATCTGTACACTCTCCACCTGCCTTCTTTTTCACTAGGAGGAGATATAATGGGTGTGAGTACCTTGGTGGGTTTAAAAACTGGCAATCTGTTTCTGTTAGGCATTTTAGTAATGCAGCTGTGGAGCTGAAGACAGACAGCAATGTTGTCAGGTTTTCTTTTGGTGGATCTTCTGTTACTAATGGTTCCCCACCGAAACAAAAAAAGGTGGTCAAAACTAAATTGTCTAAGACGGCCAAATTGAACGAACTCAGACTCTATCGTCTTAAGGCGAAAAAGAAGAAGACATCTCCCAATCCAGAAGTTAGGATCAGATATTCCCTTGAAAAGGTTGGATACCATCTATAATTTATAGTTATACCTCAGTATTAGAGAAGTTGTAATAAATAGTTAGTATTGTTATATCTGTTAGTTAGCTAGTATTGTTGTCTGCGTTGAACTCAGGGTAGATCTACTCTTCCTTTATAGACAAGTGTGCAGCAATGTCATTTGTAATCGAAGTATATGATTTCACTGCTTACTTTTCATCCTTTTATCCTTAAGATATATCATTTTTTTGTTCCCTAGCAGGCCAAATTGTGTGCAATGTGCGTGTCATAAAATGTGCCAATAATTGCTTTTTCTCTGACTTCTGCTTGACACATTTGTAAAACTGTGAAAGTTCGTTCTTTTGTTTAGTCTGTGTATTGATCATGCATGACTAGTAATTCATATTGTCCAGTAATTTTTATCAAATTTTAATTAATCAAATGTAAAACCCTATTTTTTTTTACCAGAATCATTTGTATTGAACAAAAAGAAGTATTTCAAGCAAGAGCCAAGAAGAAAAACAATTTATTTGATTTTTATACCTTCAATGGATTGCAAATGCATTTTATAGCTTGAGTTGAATTTTGAATTAATATGTATCGCCTTATGATCATTTGTTCTTATGAACCGTGAAGTTATTTGATCTTGCAATATTTTGAAGACTCAAATAATATATGTAGGCCAAAAGGAAAGAAGTGTGGCTGATTGAGAAGTTGAGGAAATTTGAGGTTCCAAAATCTGTTGCAGAAAATTATGATCCTGAAATTCTTACTGAGGAAGAGAAGCACTACTTTAAGCGTACAGGGGAGAAAAAGAAGAATTTTGTTCTTTTGGGGAGACGAGGAGTCTTTGGTGGAGTTGTTCTCAATATGCATCTGCATTGGAAGAAGCATGAAACTGTTAAAGTTATTTGCAAGCCTTGCAAACCAGGGCAGGTTCATGAATATGCTGAAGAGCTTGCTCGATTGAGCAAAGGCATTGTGGTTGACGTTAAACCCAACAACACCATAATCTTCTATCGGGGGAAGAACTATGTGCAGCCTGAAGTAATGTCGCCTCCAGACACGCTATCAAAAGACAAGGTAACCTGAGCTTATTCCTAAAAACTGAAATGATCAAAGAAAAAATATATAATTGATTTATGTGAAAATTACAATGACAAGTTAACCTACAACTGTTAAAATTTTCAAAATTTACCCCTGTGCCTCATGCAGCTTAGTGAATTCTACTTTTTTAATACACATTTTCTGTAATTTCTTTTCTTATTTATTTGAACACATAAGCACCCCCCATCCCCATTTCAGATCTTTTTCTTGGTCCACAGATAGCAATTTATCTATCCGAGTGGGGGTAGAAAACGCCAATTTGTGTCACTTATGTTAGGAGGAAAAAACACGCTCCTAGGAAACAGGGTTGTCATGCATCTGTTTTGTAAATAAGAGAGGGAGAGCCACACTTGAGTGCAGGAGGGGACTGATATAACTTGTAAGTGATGTTTGTGTGAAGGATGAGCACCCACTAGTTTGTAATTTTGTTAGGGAAGGATGAAAGAGAAGAGAGATCAGGAGTAACCGAGTAAGATAAGAACCAGCTGAGTGGTTTTTTGAGATAGTCAAACCTCTCCTAATGTTTGATAATACTTTCTACTCCTTAATAGTAAAGGAAATTCCAATAAAGGGGCCTATCACTATCATATCCTTTTTCTTTTATATGATTTTATGGCAACTTATGCATATGAATTTTGTAGTTTTCAACTACTCTATGGATTTGTTATTTGTAAACTGATAGAAGCTATCTATATTTTTGGATGAGAATGAGGCCAAGGGAGATTTCAAGAGCCCCTGCCTCCTACACAGGCCCGGGCCATGCTATGCAGCTAACTAAAAGGGCCCACATACACAAAATAGTTTCTCTTACGTGCTCTCCCCCTCTTGCCCTTTTTTTTCTTATATACATTTATAATAGGGGGCCTATCATAAACTATTTGCAAAAAAGTATAGATTGTGCACCTCTTCTAATATTATTTCATGTCCATCTTTGTATCTTGCTTTTCAGTTCTCAGGAAATGTCTGTGCCTCATGACACCTTCCGTCTTAAAAATCACTCAAGATACTTTAGATATCTGTTTCAAACCCAAAGCTTTTGGCTATATGTTTATAACGGAGTAGATCACCTTTTTGACGAAGGTTCTGATGTTTCAAATTCAGTTTATTGTAACCAAGCACTTCGCTATATGGTTAGAAAGGAATAGGTCATGTTTTTAGAAAAGGCTCCAATGGGTTGGATTGTTCACATTCAGTCTATGGCTTCACTAGTTCACTTTGACCTTCTATCACAAAATTGTATGTTTTGTTCTTAGACAATCCTTTTTACCCTTCTTTTTGCTAGCTTTGCTTATAAGTTCTCAAGACTTGATGTCTAATTATCTTCACTATCTGATTTTTCCCTTTTAATGATGAAAGAAAAAAAAATTCATTTTATGCATACAAAGAACATTTTTTTTCCTTTTTTTGGGTTCATGGGATTGAGGATTCCATTTTCTGCTTAAGGATGGCATGTTAAATCTTTCAAAATGATAGAAGATTTTTTTTTTTTTGCCCCCATGGAAATTGATATGCAAAGAAGGAATTGATATACACAATACTTCTATTAAAACACAATGCATCTTTCATAGGGAGGCTGAATGAGAACTGTTTGAAGGTTATATGAACAATTTGGAATGCCTTCATTTACTACTTCCAAGTTCTATAAGCCATGCACTTTCTCCTAGTTTGGCACCACTATTTCTCTTGTATTCTCTCCATAACCATTTTTACTTTATATTCTAACTTTTTCCTTGCCCGTTTTTAATTTTCTTATAACACAACATCCCTCTGGTTTAACCATTGGATAATGATTACATCATAAAAGCTTTTTCTTGAGTTCACACATCATAAGAGCTTTAAACAAGCAACTTAACTTTTCGCATGTGAAATATTGCAGGCCTTGGAAAAATATAAGTATGAACAATCACTTGAACATACAAGTCAGTTCATTGAAAAGTTGGAGAAAGAACTTGAAGATTTTCAGAAGCGTCTTACTCAATTCAAGAGAAAAAAGGAAGATGCTGGGGTAGAATTCATGGTTAGTTCATGA

mRNA sequence

GATTCATTGTTTGGAGTCGTTTCTCTGATTAGAAATGTGTCATATTTATCTTTATTGAACATACCCACATCATTTGGGCAGTTCTCATATGGAAGTTGTGAGCTTGAAAGAAGTAATCATATTGCAAGGTCTCCCCAGGAATCAACATCTGTACACTCTCCACCTGCCTTCTTTTTCACTAGGAGGAGATATAATGGGTGTGAGTACCTTGGTGGGTTTAAAAACTGGCAATCTGTTTCTGTTAGGCATTTTAGTAATGCAGCTGTGGAGCTGAAGACAGACAGCAATGTTGTCAGGTTTTCTTTTGGTGGATCTTCTGTTACTAATGGTTCCCCACCGAAACAAAAAAAGGTGGTCAAAACTAAATTGTCTAAGACGGCCAAATTGAACGAACTCAGACTCTATCGTCTTAAGGCGAAAAAGAAGAAGACATCTCCCAATCCAGAAGTTAGGATCAGATATTCCCTTGAAAAGGCCAAAAGGAAAGAAGTGTGGCTGATTGAGAAGTTGAGGAAATTTGAGGTTCCAAAATCTGTTGCAGAAAATTATGATCCTGAAATTCTTACTGAGGAAGAGAAGCACTACTTTAAGCGTACAGGGGAGAAAAAGAAGAATTTTGTTCTTTTGGGGAGACGAGGAGTCTTTGGTGGAGTTGTTCTCAATATGCATCTGCATTGGAAGAAGCATGAAACTGTTAAAGTTATTTGCAAGCCTTGCAAACCAGGGCAGGTTCATGAATATGCTGAAGAGCTTGCTCGATTGAGCAAAGGCATTGTGGTTGACGTTAAACCCAACAACACCATAATCTTCTATCGGGGGAAGAACTATGTGCAGCCTGAAGTAATGTCGCCTCCAGACACGCTATCAAAAGACAAGGCCTTGGAAAAATATAAGTATGAACAATCACTTGAACATACAAGTCAGTTCATTGAAAAGTTGGAGAAAGAACTTGAAGATTTTCAGAAGCGTCTTACTCAATTCAAGAGAAAAAAGGAAGATGCTGGGGTAGAATTCATGGTTAGTTCATGA

Coding sequence (CDS)

GATTCATTGTTTGGAGTCGTTTCTCTGATTAGAAATGTGTCATATTTATCTTTATTGAACATACCCACATCATTTGGGCAGTTCTCATATGGAAGTTGTGAGCTTGAAAGAAGTAATCATATTGCAAGGTCTCCCCAGGAATCAACATCTGTACACTCTCCACCTGCCTTCTTTTTCACTAGGAGGAGATATAATGGGTGTGAGTACCTTGGTGGGTTTAAAAACTGGCAATCTGTTTCTGTTAGGCATTTTAGTAATGCAGCTGTGGAGCTGAAGACAGACAGCAATGTTGTCAGGTTTTCTTTTGGTGGATCTTCTGTTACTAATGGTTCCCCACCGAAACAAAAAAAGGTGGTCAAAACTAAATTGTCTAAGACGGCCAAATTGAACGAACTCAGACTCTATCGTCTTAAGGCGAAAAAGAAGAAGACATCTCCCAATCCAGAAGTTAGGATCAGATATTCCCTTGAAAAGGCCAAAAGGAAAGAAGTGTGGCTGATTGAGAAGTTGAGGAAATTTGAGGTTCCAAAATCTGTTGCAGAAAATTATGATCCTGAAATTCTTACTGAGGAAGAGAAGCACTACTTTAAGCGTACAGGGGAGAAAAAGAAGAATTTTGTTCTTTTGGGGAGACGAGGAGTCTTTGGTGGAGTTGTTCTCAATATGCATCTGCATTGGAAGAAGCATGAAACTGTTAAAGTTATTTGCAAGCCTTGCAAACCAGGGCAGGTTCATGAATATGCTGAAGAGCTTGCTCGATTGAGCAAAGGCATTGTGGTTGACGTTAAACCCAACAACACCATAATCTTCTATCGGGGGAAGAACTATGTGCAGCCTGAAGTAATGTCGCCTCCAGACACGCTATCAAAAGACAAGGCCTTGGAAAAATATAAGTATGAACAATCACTTGAACATACAAGTCAGTTCATTGAAAAGTTGGAGAAAGAACTTGAAGATTTTCAGAAGCGTCTTACTCAATTCAAGAGAAAAAAGGAAGATGCTGGGGTAGAATTCATGGTTAGTTCATGA

Protein sequence

DSLFGVVSLIRNVSYLSLLNIPTSFGQFSYGSCELERSNHIARSPQESTSVHSPPAFFFTRRRYNGCEYLGGFKNWQSVSVRHFSNAAVELKTDSNVVRFSFGGSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKRLTQFKRKKEDAGVEFMVSS
Homology
BLAST of Spg039901 vs. NCBI nr
Match: XP_022967603.1 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbita maxima])

HSP 1 Score: 573.5 bits (1477), Expect = 1.2e-159
Identity = 294/342 (85.96%), Postives = 311/342 (90.94%), Query Frame = 0

Query: 1   DSLFGVVSLIRNVSYLSLLNIPTSFGQFSYGSCELERSNHIARSPQESTSVHSPPAFFFT 60
           DSL+G +SLIRNVS LSL NIPTSFGQ SY SCE + SN I++S QESTS+  PP FFFT
Sbjct: 14  DSLYGFISLIRNVSRLSLFNIPTSFGQSSYESCEHQISNCISKSLQESTSIRYPPGFFFT 73

Query: 61  RRRYNGCEYLGGFKNWQSVSVRHFSNAAVELKTDSNVVRFSFGGSSVTNGSPPKQKKVVK 120
            +RY+ CE LGGF+ WQ  SVRHFSN AVELKTDSN+VRFSFGGSS TNGSP KQKKV K
Sbjct: 74  -KRYSMCESLGGFEKWQ--SVRHFSNGAVELKTDSNIVRFSFGGSSSTNGSPRKQKKVAK 133

Query: 121 TKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVA 180
            KLSK AKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFEVPKSV 
Sbjct: 134 AKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVL 193

Query: 181 ENYDPEILTEEEKHYFKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCK 240
           ENYDPEILTEEEKHY KRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCK
Sbjct: 194 ENYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCK 253

Query: 241 PGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYE 300
           PGQVHEYAEELARLSKGIV+D+KPNN+I+FYRGKNYVQPEVMSPPDTLSKDKALEKYKYE
Sbjct: 254 PGQVHEYAEELARLSKGIVIDIKPNNSIVFYRGKNYVQPEVMSPPDTLSKDKALEKYKYE 313

Query: 301 QSLEHTSQFIEKLEKELEDFQKRLTQFKRKKEDAGVEFMVSS 343
           QSLEHTSQF+EKLEKELEDF K L QFKRKKE+A VEFMV+S
Sbjct: 314 QSLEHTSQFVEKLEKELEDFHKHLAQFKRKKEEAAVEFMVNS 352

BLAST of Spg039901 vs. NCBI nr
Match: KAG7011409.1 (putative CRM domain-containing protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 569.3 bits (1466), Expect = 2.2e-158
Identity = 291/342 (85.09%), Postives = 311/342 (90.94%), Query Frame = 0

Query: 1   DSLFGVVSLIRNVSYLSLLNIPTSFGQFSYGSCELERSNHIARSPQESTSVHSPPAFFFT 60
           DSL+G +SLIRNVS LSL NIP+SFGQ SY SCE + SN I++S QESTS+  PP FFF 
Sbjct: 14  DSLYGFISLIRNVSRLSLFNIPSSFGQSSYRSCEYQISNCISKSLQESTSIRYPPGFFFA 73

Query: 61  RRRYNGCEYLGGFKNWQSVSVRHFSNAAVELKTDSNVVRFSFGGSSVTNGSPPKQKKVVK 120
            +RY+ CE LGGF+ WQ  SVRHFSN AVELKTDSN+VRFSFGGSS TNGSP KQKKV K
Sbjct: 74  -KRYSMCESLGGFEKWQ--SVRHFSNGAVELKTDSNIVRFSFGGSSSTNGSPRKQKKVAK 133

Query: 121 TKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVA 180
            KLSK AKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFEVPKSV 
Sbjct: 134 AKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVL 193

Query: 181 ENYDPEILTEEEKHYFKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCK 240
           ENYDPEILTEEEKHY KRTGEKKKNF+LLGRRGVFGGVVLNMHLHWKKHETVKVICKPCK
Sbjct: 194 ENYDPEILTEEEKHYLKRTGEKKKNFMLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCK 253

Query: 241 PGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYE 300
           PGQVHEYAEELARLSKGIV+D+KPNN+I+FYRGKNYV+PEVMSPPDTLSKDKALEKYKYE
Sbjct: 254 PGQVHEYAEELARLSKGIVIDIKPNNSIVFYRGKNYVRPEVMSPPDTLSKDKALEKYKYE 313

Query: 301 QSLEHTSQFIEKLEKELEDFQKRLTQFKRKKEDAGVEFMVSS 343
           QSLEHTSQFIEKLEKELEDFQK L QFKRKKE+A +EFMV+S
Sbjct: 314 QSLEHTSQFIEKLEKELEDFQKHLAQFKRKKEEAALEFMVNS 352

BLAST of Spg039901 vs. NCBI nr
Match: XP_022963469.1 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbita moschata])

HSP 1 Score: 566.6 bits (1459), Expect = 1.4e-157
Identity = 291/342 (85.09%), Postives = 310/342 (90.64%), Query Frame = 0

Query: 1   DSLFGVVSLIRNVSYLSLLNIPTSFGQFSYGSCELERSNHIARSPQESTSVHSPPAFFFT 60
           DSL+G +SLIRNVS LSL NIP+SFGQ SY SCE + SN I++S QESTS+  PP FFF 
Sbjct: 14  DSLYGFISLIRNVSRLSLFNIPSSFGQSSYRSCEYQISNCISKSLQESTSIRYPPGFFFA 73

Query: 61  RRRYNGCEYLGGFKNWQSVSVRHFSNAAVELKTDSNVVRFSFGGSSVTNGSPPKQKKVVK 120
            +RY+ CE LGGF+ WQ  SVRHFSN AVELKTDSN+VRFSFGGSS TNGSP KQKKV K
Sbjct: 74  -KRYSMCESLGGFEKWQ--SVRHFSNGAVELKTDSNIVRFSFGGSSSTNGSPRKQKKVAK 133

Query: 121 TKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVA 180
            KLSK AKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFEVPKSV 
Sbjct: 134 AKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVL 193

Query: 181 ENYDPEILTEEEKHYFKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCK 240
           ENYDPEILTEEEKHY KRTGEKKKNF+LLGRRGVFGGVVLNMHLHWKKHETVKVICKPCK
Sbjct: 194 ENYDPEILTEEEKHYLKRTGEKKKNFMLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCK 253

Query: 241 PGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYE 300
           PGQVHEYAEELARLSKGIV+D+KPNN+IIFYRGKNYV+PEVMSP DTLSKDKALEKYKYE
Sbjct: 254 PGQVHEYAEELARLSKGIVIDIKPNNSIIFYRGKNYVRPEVMSPSDTLSKDKALEKYKYE 313

Query: 301 QSLEHTSQFIEKLEKELEDFQKRLTQFKRKKEDAGVEFMVSS 343
           QSLEHTSQFIEKLEKELEDFQK L QFKRKKE+A +EFMV+S
Sbjct: 314 QSLEHTSQFIEKLEKELEDFQKHLAQFKRKKEEAALEFMVNS 352

BLAST of Spg039901 vs. NCBI nr
Match: KAG6571683.1 (putative CRM domain-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 565.5 bits (1456), Expect = 3.2e-157
Identity = 290/342 (84.80%), Postives = 309/342 (90.35%), Query Frame = 0

Query: 1   DSLFGVVSLIRNVSYLSLLNIPTSFGQFSYGSCELERSNHIARSPQESTSVHSPPAFFFT 60
           DSL+G +SLIRNVS LSL NIP+SFGQ SY SCE + SN I++S QESTS+  PP FFF 
Sbjct: 14  DSLYGFISLIRNVSRLSLFNIPSSFGQSSYRSCEYQISNCISKSLQESTSIRYPPGFFFA 73

Query: 61  RRRYNGCEYLGGFKNWQSVSVRHFSNAAVELKTDSNVVRFSFGGSSVTNGSPPKQKKVVK 120
            +RY+ CE LGGF+ WQ  SVRHFSN AVELKTDSN+VRFSFGGSS TNGSP KQKKV K
Sbjct: 74  -KRYSMCESLGGFEKWQ--SVRHFSNGAVELKTDSNIVRFSFGGSSSTNGSPRKQKKVAK 133

Query: 121 TKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVA 180
            KLSK AKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFEVPKSV 
Sbjct: 134 AKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVL 193

Query: 181 ENYDPEILTEEEKHYFKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCK 240
           ENYDPEILTEEEKHY KRTGEKKKNF+LLGRRGVFGGVVLNMHLHWKKHETVKVICKPCK
Sbjct: 194 ENYDPEILTEEEKHYLKRTGEKKKNFMLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCK 253

Query: 241 PGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYE 300
           PGQVHEYAEELARLSKGIV+D+KPNN+IIFYRGKNYV+PEVMSP DTLSKDKALEKYKYE
Sbjct: 254 PGQVHEYAEELARLSKGIVIDIKPNNSIIFYRGKNYVRPEVMSPSDTLSKDKALEKYKYE 313

Query: 301 QSLEHTSQFIEKLEKELEDFQKRLTQFKRKKEDAGVEFMVSS 343
           QSLEHTSQFIEKLEKELEDFQK L QFKRKKE+A +EFM+ S
Sbjct: 314 QSLEHTSQFIEKLEKELEDFQKHLAQFKRKKEEAALEFMIRS 352

BLAST of Spg039901 vs. NCBI nr
Match: XP_023511616.1 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 564.3 bits (1453), Expect = 7.1e-157
Identity = 290/342 (84.80%), Postives = 309/342 (90.35%), Query Frame = 0

Query: 1   DSLFGVVSLIRNVSYLSLLNIPTSFGQFSYGSCELERSNHIARSPQESTSVHSPPAFFFT 60
           DSL+G +S+IRNVS LSL NI TSFGQ SYGSCE + SN I++S QESTS+   P FFF 
Sbjct: 14  DSLYGFISMIRNVSRLSLFNISTSFGQSSYGSCEYQISNCISKSLQESTSIRYLPGFFFA 73

Query: 61  RRRYNGCEYLGGFKNWQSVSVRHFSNAAVELKTDSNVVRFSFGGSSVTNGSPPKQKKVVK 120
            +RY+ CE LGGF+ WQ  SVRHFSN AVELKTDSN+VRFSFGGSS TNGSP KQKKV K
Sbjct: 74  -KRYSMCESLGGFEKWQ--SVRHFSNGAVELKTDSNIVRFSFGGSSSTNGSPRKQKKVAK 133

Query: 121 TKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVA 180
            KLSK AKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFEVPKSV 
Sbjct: 134 AKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVL 193

Query: 181 ENYDPEILTEEEKHYFKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCK 240
           E YDPEILTEEEKHY KRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCK
Sbjct: 194 ETYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCK 253

Query: 241 PGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYE 300
           PGQVHEYAEELARLSKGIV+D+KPNN+I+FYRGKNYV+PEVMSPPDTLSK+KALEKYKYE
Sbjct: 254 PGQVHEYAEELARLSKGIVIDIKPNNSIVFYRGKNYVRPEVMSPPDTLSKNKALEKYKYE 313

Query: 301 QSLEHTSQFIEKLEKELEDFQKRLTQFKRKKEDAGVEFMVSS 343
           QSLEHTSQFIEKLEKELEDFQK L QFKRKKE+A VEFMV+S
Sbjct: 314 QSLEHTSQFIEKLEKELEDFQKHLAQFKRKKEEAAVEFMVNS 352

BLAST of Spg039901 vs. ExPASy Swiss-Prot
Match: Q67XL4 (Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g25440 PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.3e-41
Identity = 105/232 (45.26%), Postives = 144/232 (62.07%), Query Frame = 0

Query: 92  KTDSNVVRFSFGGSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVR 151
           +T  + +  S   SS    S  K K+  K    K A +  L+ +R K KK+      E +
Sbjct: 83  ETGDDDISKSENSSSQDGDSCTKLKR--KKLKGKRAVVRWLKFFRWKKKKEFERMTSEEK 142

Query: 152 IRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTGEKKKNFVLLGR 211
           I   L KA++KE  L+E ++K E  +S    +DPEILT EE  Y+ + G K KN+V +GR
Sbjct: 143 ILNKLRKARKKEERLMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVGR 202

Query: 212 RGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFY 271
           RG++ GV+LNMHLHWKKH+T++V+ K   P +V E A ELARL+ GIV+DV   NTII Y
Sbjct: 203 RGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNTIIMY 262

Query: 272 RGKNYVQP--EVMSPPDTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQ 322
           RGKNYVQP  E+MSP  TL + KAL+K K   +L    ++I +LE+EL+  Q
Sbjct: 263 RGKNYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQ 312

BLAST of Spg039901 vs. ExPASy Swiss-Prot
Match: Q9LT57 (CRM-domain containing factor CFM9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CFM9 PE=2 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.2e-36
Identity = 90/214 (42.06%), Postives = 136/214 (63.55%), Query Frame = 0

Query: 104 GSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE 163
           G S + G   + K   + +      L E+R  R K  KKK   + E R+ Y+L++AK+K 
Sbjct: 11  GMSTSRGRSMRSKVESRMRKESGKTLREIR--RAKKLKKKLMTDEE-RLIYNLKRAKKKV 70

Query: 164 VWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTGEKKKNFVLLGRRGVFGGVVLNMH 223
             L++KL+K+++P+  +  +DPE+ T E+   FK+ G K KN+V +G RGVFGGVV NMH
Sbjct: 71  ALLLQKLKKYDLPELPSPVHDPELFTSEQVQAFKKIGFKNKNYVPVGVRGVFGGVVQNMH 130

Query: 224 LHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMS 283
           +HWK HETV+V C      ++ E A  +ARLS G+V+++    TII +RG+NY QP+ + 
Sbjct: 131 MHWKFHETVQVCCDNFPKEKIKEMASMIARLSGGVVINIHNVKTIIMFRGRNYRQPKNLI 190

Query: 284 PPDTLSKDKALEKYKYEQSLEHTSQFIEKLEKEL 318
           P +TL+K KAL K ++EQ+LE     I+K E++L
Sbjct: 191 PVNTLTKRKALFKARFEQALESQKLNIKKTEQQL 221

BLAST of Spg039901 vs. ExPASy Swiss-Prot
Match: Q2R1U8 (CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=CFM3 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 7.7e-21
Identity = 69/191 (36.13%), Postives = 100/191 (52.36%), Query Frame = 0

Query: 151 RIRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYD-PEILTEEEKHYFKRTGEKKKNFVLL 210
           ++ + L+ A++K       L K E      E    PE +T+EE+  F++ G + K F+LL
Sbjct: 554 KLEWKLQLAQKKIEKAERVLGKVETALKPTEGIQPPETITDEERFMFRKLGLRMKAFLLL 613

Query: 211 GRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVD---VKPNN 270
           GRRGVF G + NMHLHWK  E VK++ K    G V + A  L   S GI+V    V    
Sbjct: 614 GRRGVFDGTIENMHLHWKYRELVKILVKAKSFGDVKKIALSLEAESGGILVSVDKVSKGY 673

Query: 271 TIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKRLTQ 330
            I+ +RGK+Y +P  + P + LSK KAL +    Q  E  S  I  L + ++  +  L Q
Sbjct: 674 AIVVFRGKDYARPSKLRPRNLLSKRKALARSIEIQRREALSHHIATLNRRVKKLKAELLQ 733

Query: 331 FKRKKEDAGVE 338
            +  KE+  VE
Sbjct: 734 MEGVKEEGDVE 744

BLAST of Spg039901 vs. ExPASy Swiss-Prot
Match: Q8L7C2 (CRM-domain containing factor CFM2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CFM2 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.2e-20
Identity = 75/235 (31.91%), Postives = 122/235 (51.91%), Query Frame = 0

Query: 101 SFGGSSVTNGSPPKQKKVVKTKLSKTAK--LNELRLYRLKAKKKKTS----PNPEVRIRY 160
           S  G+ +T      + + VK  +   AK   + ++ +++K++++ +         +++  
Sbjct: 489 SVHGNKLTENEEEIKPRAVKEDIELEAKDQKDHIQTHQMKSRQRNSPEAILEKTSMKLSM 548

Query: 161 SLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTGEKKKNFVLLGRRGV 220
           +LEK    E  L + L   E P+    + D E +T +EK+  ++ G K K F+LLGRRGV
Sbjct: 549 ALEKKANAEKVLAD-LENRESPQ--LSDIDKEGITNDEKYMLRKIGLKMKPFLLLGRRGV 608

Query: 221 FGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVK---PNNTIIFY 280
           F G + NMHLHWK  E VK+IC        H+ AE L   S GI+V V+       II Y
Sbjct: 609 FDGTIENMHLHWKYRELVKIICNEYSIEAAHKVAEILEAESGGILVAVEMVSKGYAIIVY 668

Query: 281 RGKNYVQPEVMSPPDTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKRLTQ 327
           RGKNY +P+ + P   LSK +AL++    Q  +     + KL   +E+  ++L +
Sbjct: 669 RGKNYERPQCLRPQTLLSKREALKRSVEAQRRKSLKLHVLKLSNNIEELNRQLVE 720

BLAST of Spg039901 vs. ExPASy Swiss-Prot
Match: A7XN92 (CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Zea mays OX=4577 GN=CFM3 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.1e-19
Identity = 67/191 (35.08%), Postives = 99/191 (51.83%), Query Frame = 0

Query: 151 RIRYSLEKAKRKEVWLIEKLRKFEVP-KSVAENYDPEILTEEEKHYFKRTGEKKKNFVLL 210
           ++ + L  A++K       L K E   +   ++  PE +T+EE+  F++ G + K F+LL
Sbjct: 546 KLEWKLSLAQKKMEKAERVLGKVETALRPTEDSRPPETITDEERFMFRKLGLRMKAFLLL 605

Query: 211 GRRGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVD---VKPNN 270
           GRRGVF G + NMHLHWK  E VK++ K      V   A  L   S GI+V    V    
Sbjct: 606 GRRGVFDGTIENMHLHWKYRELVKILVKAKSFADVKRIALSLEAESGGILVSVDKVSKGY 665

Query: 271 TIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKRLTQ 330
            I+ +RGKNY +P  + P + LSK KAL +    Q  +  S+   KL +++E  +  L Q
Sbjct: 666 AIVVFRGKNYRRPSSLRPRNLLSKRKALARSIELQRHQALSRHFAKLNRKVERLKAELVQ 725

Query: 331 FKRKKEDAGVE 338
            +  KE    E
Sbjct: 726 MEDVKEQGDEE 736

BLAST of Spg039901 vs. ExPASy TrEMBL
Match: A0A6J1HVJ0 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467053 PE=4 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 5.7e-160
Identity = 294/342 (85.96%), Postives = 311/342 (90.94%), Query Frame = 0

Query: 1   DSLFGVVSLIRNVSYLSLLNIPTSFGQFSYGSCELERSNHIARSPQESTSVHSPPAFFFT 60
           DSL+G +SLIRNVS LSL NIPTSFGQ SY SCE + SN I++S QESTS+  PP FFFT
Sbjct: 14  DSLYGFISLIRNVSRLSLFNIPTSFGQSSYESCEHQISNCISKSLQESTSIRYPPGFFFT 73

Query: 61  RRRYNGCEYLGGFKNWQSVSVRHFSNAAVELKTDSNVVRFSFGGSSVTNGSPPKQKKVVK 120
            +RY+ CE LGGF+ WQ  SVRHFSN AVELKTDSN+VRFSFGGSS TNGSP KQKKV K
Sbjct: 74  -KRYSMCESLGGFEKWQ--SVRHFSNGAVELKTDSNIVRFSFGGSSSTNGSPRKQKKVAK 133

Query: 121 TKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVA 180
            KLSK AKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFEVPKSV 
Sbjct: 134 AKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVL 193

Query: 181 ENYDPEILTEEEKHYFKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCK 240
           ENYDPEILTEEEKHY KRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCK
Sbjct: 194 ENYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCK 253

Query: 241 PGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYE 300
           PGQVHEYAEELARLSKGIV+D+KPNN+I+FYRGKNYVQPEVMSPPDTLSKDKALEKYKYE
Sbjct: 254 PGQVHEYAEELARLSKGIVIDIKPNNSIVFYRGKNYVQPEVMSPPDTLSKDKALEKYKYE 313

Query: 301 QSLEHTSQFIEKLEKELEDFQKRLTQFKRKKEDAGVEFMVSS 343
           QSLEHTSQF+EKLEKELEDF K L QFKRKKE+A VEFMV+S
Sbjct: 314 QSLEHTSQFVEKLEKELEDFHKHLAQFKRKKEEAAVEFMVNS 352

BLAST of Spg039901 vs. ExPASy TrEMBL
Match: A0A6J1HK68 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111463795 PE=4 SV=1)

HSP 1 Score: 566.6 bits (1459), Expect = 7.0e-158
Identity = 291/342 (85.09%), Postives = 310/342 (90.64%), Query Frame = 0

Query: 1   DSLFGVVSLIRNVSYLSLLNIPTSFGQFSYGSCELERSNHIARSPQESTSVHSPPAFFFT 60
           DSL+G +SLIRNVS LSL NIP+SFGQ SY SCE + SN I++S QESTS+  PP FFF 
Sbjct: 14  DSLYGFISLIRNVSRLSLFNIPSSFGQSSYRSCEYQISNCISKSLQESTSIRYPPGFFFA 73

Query: 61  RRRYNGCEYLGGFKNWQSVSVRHFSNAAVELKTDSNVVRFSFGGSSVTNGSPPKQKKVVK 120
            +RY+ CE LGGF+ WQ  SVRHFSN AVELKTDSN+VRFSFGGSS TNGSP KQKKV K
Sbjct: 74  -KRYSMCESLGGFEKWQ--SVRHFSNGAVELKTDSNIVRFSFGGSSSTNGSPRKQKKVAK 133

Query: 121 TKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVA 180
            KLSK AKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFEVPKSV 
Sbjct: 134 AKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVPKSVL 193

Query: 181 ENYDPEILTEEEKHYFKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCK 240
           ENYDPEILTEEEKHY KRTGEKKKNF+LLGRRGVFGGVVLNMHLHWKKHETVKVICKPCK
Sbjct: 194 ENYDPEILTEEEKHYLKRTGEKKKNFMLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCK 253

Query: 241 PGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYE 300
           PGQVHEYAEELARLSKGIV+D+KPNN+IIFYRGKNYV+PEVMSP DTLSKDKALEKYKYE
Sbjct: 254 PGQVHEYAEELARLSKGIVIDIKPNNSIIFYRGKNYVRPEVMSPSDTLSKDKALEKYKYE 313

Query: 301 QSLEHTSQFIEKLEKELEDFQKRLTQFKRKKEDAGVEFMVSS 343
           QSLEHTSQFIEKLEKELEDFQK L QFKRKKE+A +EFMV+S
Sbjct: 314 QSLEHTSQFIEKLEKELEDFQKHLAQFKRKKEEAALEFMVNS 352

BLAST of Spg039901 vs. ExPASy TrEMBL
Match: A0A6J1CKB1 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012231 PE=4 SV=1)

HSP 1 Score: 559.3 bits (1440), Expect = 1.1e-155
Identity = 289/340 (85.00%), Postives = 300/340 (88.24%), Query Frame = 0

Query: 1   DSLFGVVSLIRNVSYLSLLNIPTSFGQFSYGSCELERSNHIARSPQESTSVHSPPAFFFT 60
           +SL G +SLIRNVS  SL NIP SFGQ  YGSCE +RSNHI    QESTS+H PP F F+
Sbjct: 14  NSLVGFISLIRNVSRRSLSNIPASFGQSKYGSCEHQRSNHIVTPLQESTSIHFPPGFLFS 73

Query: 61  RRRYNGCEYLGGFKNWQSVSVRHFSNAAVELKTDSNVVRFSFGGSSVTNGSPPKQKKVVK 120
            RRYN  E+LGGFK WQ  S RHF + AVELKTDSN+VRFSFG  SVTNGSPPKQKKV K
Sbjct: 74  -RRYNVPEFLGGFKKWQ--SFRHFRSVAVELKTDSNIVRFSFGRPSVTNGSPPKQKKVAK 133

Query: 121 TKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVA 180
           TKLSK AKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFEV K V 
Sbjct: 134 TKLSKKAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEVSKPVV 193

Query: 181 ENYDPEILTEEEKHYFKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCK 240
           E YDPEILTEEEKH+ KRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCK
Sbjct: 194 EKYDPEILTEEEKHFLKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCK 253

Query: 241 PGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYE 300
           PGQVHEYAEEL RLSKGIVVD+KPNN IIFYRGKNYVQPEVMSPPDTLSKDKA+EKYKYE
Sbjct: 254 PGQVHEYAEELTRLSKGIVVDIKPNNAIIFYRGKNYVQPEVMSPPDTLSKDKAMEKYKYE 313

Query: 301 QSLEHTSQFIEKLEKELEDFQKRLTQFKRKKEDAGVEFMV 341
           QSLEHTSQFIEKLEKELEDFQK L QFKRKKEDAGVE MV
Sbjct: 314 QSLEHTSQFIEKLEKELEDFQKHLAQFKRKKEDAGVESMV 350

BLAST of Spg039901 vs. ExPASy TrEMBL
Match: A0A5A7SK96 (Putative CRM domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G002570 PE=4 SV=1)

HSP 1 Score: 523.9 bits (1348), Expect = 5.2e-145
Identity = 276/333 (82.88%), Postives = 291/333 (87.39%), Query Frame = 0

Query: 2   SLFGVVSLIRNVSYLSLLNIPTSFGQFSYGSCELERSNHIARSPQESTSVHSPPAFFFTR 61
           SLFG  SLIRN S LSLL++PTSFGQ S+GSCE + S+ I +S  ESTS   PP    T 
Sbjct: 105 SLFGFTSLIRNASPLSLLSVPTSFGQSSHGSCEHQASSRIVKSLNESTSRDCPPGSSLT- 164

Query: 62  RRYNGCEYLGGFKNWQSVSVRHFSNAAVELKTDSNVVRFSFGGSSVTNGSPPKQKKVVKT 121
            RY+  E  GGFK WQ  SVRHFSNA VELKTDSN VRFSFG SS TNGS  KQKKV KT
Sbjct: 165 WRYSMWESYGGFKRWQ--SVRHFSNAVVELKTDSNTVRFSFGPSS-TNGSQLKQKKVAKT 224

Query: 122 KLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAE 181
           KLSK  KLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFE+PKSV E
Sbjct: 225 KLSKKDKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEIPKSVVE 284

Query: 182 NYDPEILTEEEKHYFKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKP 241
            YDPEILTEEEKHY KRTGEKKKNFVLLGRRGVFGGVVLNMH+HWKKHETVKVICKPCKP
Sbjct: 285 KYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKP 344

Query: 242 GQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYEQ 301
           GQVHEYAEEL+RLSKGIV+D+KPNN+IIFYRGKNYVQPEVMSPPDTLSKDKALEKY+YEQ
Sbjct: 345 GQVHEYAEELSRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLSKDKALEKYRYEQ 404

Query: 302 SLEHTSQFIEKLEKELEDFQKRLTQFKRKKEDA 335
           SLEHTSQFIEKLEKELEDFQK L QFKR+KEDA
Sbjct: 405 SLEHTSQFIEKLEKELEDFQKHLAQFKRRKEDA 433

BLAST of Spg039901 vs. ExPASy TrEMBL
Match: A0A1S3C151 (uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103495436 PE=4 SV=1)

HSP 1 Score: 523.9 bits (1348), Expect = 5.2e-145
Identity = 276/333 (82.88%), Postives = 291/333 (87.39%), Query Frame = 0

Query: 2   SLFGVVSLIRNVSYLSLLNIPTSFGQFSYGSCELERSNHIARSPQESTSVHSPPAFFFTR 61
           SLFG  SLIRN S LSLL++PTSFGQ S+GSCE + S+ I +S  ESTS   PP    T 
Sbjct: 16  SLFGFTSLIRNASPLSLLSVPTSFGQSSHGSCEHQASSRIVKSLNESTSRDCPPGSSLT- 75

Query: 62  RRYNGCEYLGGFKNWQSVSVRHFSNAAVELKTDSNVVRFSFGGSSVTNGSPPKQKKVVKT 121
            RY+  E  GGFK WQ  SVRHFSNA VELKTDSN VRFSFG SS TNGS  KQKKV KT
Sbjct: 76  WRYSMWESYGGFKRWQ--SVRHFSNAVVELKTDSNTVRFSFGPSS-TNGSQLKQKKVAKT 135

Query: 122 KLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKSVAE 181
           KLSK  KLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE WLIEKLRKFE+PKSV E
Sbjct: 136 KLSKKDKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEAWLIEKLRKFEIPKSVVE 195

Query: 182 NYDPEILTEEEKHYFKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKPCKP 241
            YDPEILTEEEKHY KRTGEKKKNFVLLGRRGVFGGVVLNMH+HWKKHETVKVICKPCKP
Sbjct: 196 KYDPEILTEEEKHYLKRTGEKKKNFVLLGRRGVFGGVVLNMHMHWKKHETVKVICKPCKP 255

Query: 242 GQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKYKYEQ 301
           GQVHEYAEEL+RLSKGIV+D+KPNN+IIFYRGKNYVQPEVMSPPDTLSKDKALEKY+YEQ
Sbjct: 256 GQVHEYAEELSRLSKGIVIDIKPNNSIIFYRGKNYVQPEVMSPPDTLSKDKALEKYRYEQ 315

Query: 302 SLEHTSQFIEKLEKELEDFQKRLTQFKRKKEDA 335
           SLEHTSQFIEKLEKELEDFQK L QFKR+KEDA
Sbjct: 316 SLEHTSQFIEKLEKELEDFQKHLAQFKRRKEDA 344

BLAST of Spg039901 vs. TAIR 10
Match: AT4G13070.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 380.2 bits (975), Expect = 1.8e-105
Identity = 202/276 (73.19%), Postives = 231/276 (83.70%), Query Frame = 0

Query: 62  RRYNGCEYLGGFKNWQSVSVRHFSNAAVELKTDSNVVRFSFGG-SSVTNGSPP--KQKKV 121
           +R+N   Y G F      S R+ SN+ +EL+TD NVVRF+F   SS  N   P  K+KK 
Sbjct: 59  QRWNLFAYDGLF------SRRYLSNSTIELRTDDNVVRFAFNNVSSSGNNVVPTRKEKKW 118

Query: 122 VKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKEVWLIEKLRKFEVPKS 181
            + KLS+ AK+NELR YRLKAKKK  SPNPEVRIRY LEKAKRKE WLIEKLRK++VPKS
Sbjct: 119 KRAKLSRKAKVNELRFYRLKAKKKMNSPNPEVRIRYKLEKAKRKEEWLIEKLRKYDVPKS 178

Query: 182 VAENYDPEILTEEEKHYFKRTGEKKKNFVLLGRRGVFGGVVLNMHLHWKKHETVKVICKP 241
            AE YDPE LTEEE+HY KRTGEK+KNFVL+GRRGVFGGVVLN+HLHWKKHETVKVICKP
Sbjct: 179 PAEPYDPESLTEEEQHYLKRTGEKRKNFVLVGRRGVFGGVVLNLHLHWKKHETVKVICKP 238

Query: 242 C-KPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMSPPDTLSKDKALEKY 301
           C KPGQVHEYAEELARLSKGIV+DVKPNNTI+ YRGKNYV+PEVMSP DTLSKDKALEKY
Sbjct: 239 CNKPGQVHEYAEELARLSKGIVIDVKPNNTIVLYRGKNYVRPEVMSPVDTLSKDKALEKY 298

Query: 302 KYEQSLEHTSQFIEKLEKELEDFQKRLTQFKRKKED 334
           +YEQSLEHTS+FIEKLEKELE++ K + + K+KK++
Sbjct: 299 RYEQSLEHTSEFIEKLEKELEEYHKYVARHKKKKDE 328

BLAST of Spg039901 vs. TAIR 10
Match: AT2G28480.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 212.6 bits (540), Expect = 4.9e-55
Identity = 123/227 (54.19%), Postives = 153/227 (67.40%), Query Frame = 0

Query: 112 PPKQ-----KKVVKTKLSK------TAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAK 171
           PPK+     KK +K K  K       A   + R   +K KKKK   N E RI+Y LEKAK
Sbjct: 78  PPKKYKWLTKKRLKLKRKKEREERNAANRKDPRRLTVKGKKKK-FVNAEERIKYKLEKAK 137

Query: 172 RKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTGEKKKNFVLLGRRGVFGGVVL 231
            KE  LIE+L+++EV K       P  +T EE+ Y K+ G+K+ N+V +GRRGVFGGV+L
Sbjct: 138 IKEALLIERLKRYEVAKVQGPEVRPHEITGEERFYLKKMGQKRSNYVPIGRRGVFGGVIL 197

Query: 232 NMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPE 291
           NMHLHWKKHETVKVIC   KPGQV +YAEELA+LS G+ V++  ++TIIFYRGK YVQP+
Sbjct: 198 NMHLHWKKHETVKVICNNSKPGQVQQYAEELAKLSGGVPVNIIGDDTIIFYRGKGYVQPQ 257

Query: 292 VMSPPDTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQKRLTQF 328
           VMSP DTLSK +A EK KYEQSLE    FI   EKELE + + +  +
Sbjct: 258 VMSPIDTLSKKRAYEKSKYEQSLESVRHFIAIAEKELELYYRHVALY 303

BLAST of Spg039901 vs. TAIR 10
Match: AT3G25440.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 171.0 bits (432), Expect = 1.6e-42
Identity = 105/232 (45.26%), Postives = 144/232 (62.07%), Query Frame = 0

Query: 92  KTDSNVVRFSFGGSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVR 151
           +T  + +  S   SS    S  K K+  K    K A +  L+ +R K KK+      E +
Sbjct: 83  ETGDDDISKSENSSSQDGDSCTKLKR--KKLKGKRAVVRWLKFFRWKKKKEFERMTSEEK 142

Query: 152 IRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTGEKKKNFVLLGR 211
           I   L KA++KE  L+E ++K E  +S    +DPEILT EE  Y+ + G K KN+V +GR
Sbjct: 143 ILNKLRKARKKEERLMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVGR 202

Query: 212 RGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFY 271
           RG++ GV+LNMHLHWKKH+T++V+ K   P +V E A ELARL+ GIV+DV   NTII Y
Sbjct: 203 RGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNTIIMY 262

Query: 272 RGKNYVQP--EVMSPPDTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQ 322
           RGKNYVQP  E+MSP  TL + KAL+K K   +L    ++I +LE+EL+  Q
Sbjct: 263 RGKNYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQ 312

BLAST of Spg039901 vs. TAIR 10
Match: AT3G25440.2 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 171.0 bits (432), Expect = 1.6e-42
Identity = 105/232 (45.26%), Postives = 144/232 (62.07%), Query Frame = 0

Query: 92  KTDSNVVRFSFGGSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVR 151
           +T  + +  S   SS    S  K K+  K    K A +  L+ +R K KK+      E +
Sbjct: 19  ETGDDDISKSENSSSQDGDSCTKLKR--KKLKGKRAVVRWLKFFRWKKKKEFERMTSEEK 78

Query: 152 IRYSLEKAKRKEVWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTGEKKKNFVLLGR 211
           I   L KA++KE  L+E ++K E  +S    +DPEILT EE  Y+ + G K KN+V +GR
Sbjct: 79  ILNKLRKARKKEERLMETMKKLEPSESAETTHDPEILTPEEHFYYLKMGLKCKNYVPVGR 138

Query: 212 RGVFGGVVLNMHLHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFY 271
           RG++ GV+LNMHLHWKKH+T++V+ K   P +V E A ELARL+ GIV+DV   NTII Y
Sbjct: 139 RGIYQGVILNMHLHWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNTIIMY 198

Query: 272 RGKNYVQP--EVMSPPDTLSKDKALEKYKYEQSLEHTSQFIEKLEKELEDFQ 322
           RGKNYVQP  E+MSP  TL + KAL+K K   +L    ++I +LE+EL+  Q
Sbjct: 199 RGKNYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQ 248

BLAST of Spg039901 vs. TAIR 10
Match: AT3G27550.1 (RNA-binding CRS1 / YhbY (CRM) domain protein )

HSP 1 Score: 154.5 bits (389), Expect = 1.6e-37
Identity = 90/214 (42.06%), Postives = 136/214 (63.55%), Query Frame = 0

Query: 104 GSSVTNGSPPKQKKVVKTKLSKTAKLNELRLYRLKAKKKKTSPNPEVRIRYSLEKAKRKE 163
           G S + G   + K   + +      L E+R  R K  KKK   + E R+ Y+L++AK+K 
Sbjct: 11  GMSTSRGRSMRSKVESRMRKESGKTLREIR--RAKKLKKKLMTDEE-RLIYNLKRAKKKV 70

Query: 164 VWLIEKLRKFEVPKSVAENYDPEILTEEEKHYFKRTGEKKKNFVLLGRRGVFGGVVLNMH 223
             L++KL+K+++P+  +  +DPE+ T E+   FK+ G K KN+V +G RGVFGGVV NMH
Sbjct: 71  ALLLQKLKKYDLPELPSPVHDPELFTSEQVQAFKKIGFKNKNYVPVGVRGVFGGVVQNMH 130

Query: 224 LHWKKHETVKVICKPCKPGQVHEYAEELARLSKGIVVDVKPNNTIIFYRGKNYVQPEVMS 283
           +HWK HETV+V C      ++ E A  +ARLS G+V+++    TII +RG+NY QP+ + 
Sbjct: 131 MHWKFHETVQVCCDNFPKEKIKEMASMIARLSGGVVINIHNVKTIIMFRGRNYRQPKNLI 190

Query: 284 PPDTLSKDKALEKYKYEQSLEHTSQFIEKLEKEL 318
           P +TL+K KAL K ++EQ+LE     I+K E++L
Sbjct: 191 PVNTLTKRKALFKARFEQALESQKLNIKKTEQQL 221

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022967603.11.2e-15985.96uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbit... [more]
KAG7011409.12.2e-15885.09putative CRM domain-containing protein, chloroplastic [Cucurbita argyrosperma su... [more]
XP_022963469.11.4e-15785.09uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbit... [more]
KAG6571683.13.2e-15784.80putative CRM domain-containing protein, chloroplastic, partial [Cucurbita argyro... [more]
XP_023511616.17.1e-15784.80uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Cucurbit... [more]
Match NameE-valueIdentityDescription
Q67XL42.3e-4145.26Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabid... [more]
Q9LT572.2e-3642.06CRM-domain containing factor CFM9, mitochondrial OS=Arabidopsis thaliana OX=3702... [more]
Q2R1U87.7e-2136.13CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Oryza sativa s... [more]
Q8L7C22.2e-2031.91CRM-domain containing factor CFM2, chloroplastic OS=Arabidopsis thaliana OX=3702... [more]
A7XN921.1e-1935.08CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Zea mays OX=45... [more]
Match NameE-valueIdentityDescription
A0A6J1HVJ05.7e-16085.96uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucurb... [more]
A0A6J1HK687.0e-15885.09uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucurb... [more]
A0A6J1CKB11.1e-15585.00uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Momord... [more]
A0A5A7SK965.2e-14582.88Putative CRM domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A1S3C1515.2e-14582.88uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Cucumi... [more]
Match NameE-valueIdentityDescription
AT4G13070.11.8e-10573.19RNA-binding CRS1 / YhbY (CRM) domain protein [more]
AT2G28480.14.9e-5554.19RNA-binding CRS1 / YhbY (CRM) domain protein [more]
AT3G25440.11.6e-4245.26RNA-binding CRS1 / YhbY (CRM) domain protein [more]
AT3G25440.21.6e-4245.26RNA-binding CRS1 / YhbY (CRM) domain protein [more]
AT3G27550.11.6e-3742.06RNA-binding CRS1 / YhbY (CRM) domain protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 303..337
NoneNo IPR availablePANTHERPTHR31426:SF3OS06G0304500 PROTEINcoord: 76..334
IPR001890RNA-binding, CRM domainSMARTSM01103CRS1_YhbY_2coord: 188..272
e-value: 2.9E-22
score: 90.0
IPR001890RNA-binding, CRM domainPFAMPF01985CRS1_YhbYcoord: 188..272
e-value: 2.3E-18
score: 66.1
IPR001890RNA-binding, CRM domainPROSITEPS51295CRMcoord: 186..283
score: 19.672785
IPR035920YhbY-like superfamilyGENE3D3.30.110.60coord: 187..284
e-value: 5.5E-23
score: 82.9
IPR035920YhbY-like superfamilySUPERFAMILY75471YhbY-likecoord: 187..282
IPR040286CRM domain-containing protein At3g25440-likePANTHERPTHR31426GROUP II INTRON SPLICING FACTOR CRS1-LIKEcoord: 76..334

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg039901.1Spg039901.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding