Spg039879 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg039879
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Metalloendoproteinase 3-MMP-like
Location	scaffold10: 43607969 .. 43608976 (+)
RNA-Seq Expression	Spg039879
Synteny	Spg039879

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTAAATTATGTCTCCAACTCTTCCTCCTCCTCCTCCTCGCCTTCATTGCACCTCACGTGATCTCGGCACGTGATCTTGACATCCACAAATCTTCTCGCCCTCTATTTCCCAAGCATCTTCAAGGAAGTCGCAAAGGCGACAAGCTCGGAGGAATCCACAGCGTCAAGACGTACCTACAACGTTACGGTTACTTGAGCAAAAACAATTCCCATGCAGACGCATTCGACGAGCCCTTGGAATCCGCCGTTAAGAGATACCAAAAATTCTTCAAGCTCAACGCGAGCGGGATTTTGGACAAGGAGACGCTAGCTCAAATGTCGAAGAATCGATGTGGGGTAACAGATAATTTCTAGGTTGTATGAGCTGGGGCATATTCTTGGGCTTGGCCACAGCGACAGGCCTGACATGGACGCTGGAACCACCAAGACCAAGTTGCATCCTGACGATCTTGCTGGGTTTATTCGTGCTTTATACCCTTAGAACTATTTGTTTCTCTAACTATTTACAGATTCTTTTTTCTTGCGTGTAAGTTTGGTTTGTTGCAATTTTTACGTTAGGATAGGTTTCAACTCGGAGAATTGTAAAAAAAGCATTCATACATGTGTTATGAATTACAAAACATTTATCTGATATGGAAACGATGGTATCTAGACAAAAATAACCTTAGAGTTTATTTTTTTTAATTAATTTTTATAAACAATTTGGAAGTTTTGAGAGAGTTATTTAAGGGTTAATTTTGTTCATTAATTTAAATTTAATTTTATGAGAAGCTTGATTTTCATTAAATTCATGAATTTTTGGTCATATGTGTTTATGAACAATAAACTGTATCAAATCATAACCTGCTGTTAGAGGTGATTCTAGACTATCTTTAAAATCAAGGAACTAAGTAGGACAACACATCATCAACGCGAGAATTTGATTCAGAATCAAATCCCAAAGTAGAGAAAGGTCGAGAAGGATTGGGCTCGCCAAATCCCTTGGCCGAGGCTGAGGCTTAG

mRNA sequence

ATGGCTTCTAAATTATGTCTCCAACTCTTCCTCCTCCTCCTCCTCGCCTTCATTGCACCTCACGTGATCTCGGCACGTGATCTTGACATCCACAAATCTTCTCGCCCTCTATTTCCCAAGCATCTTCAAGGAAGTCGCAAAGGCGACAAGCTCGGAGGAATCCACAGCGTCAAGACGTACCTACAACGTTACGGTTACTTGAGCAAAAACAATTCCCATGCAGACGCATTCGACGAGCCCTTGGAATCCGCCGTTAAGAGATACCAAAAATTCTTCAAGCTCAACGCGAGCGGGATTTTGGACAAGGAGACGCTAGCTCAAATGTCGAAGAATCGATAA

Coding sequence (CDS)

ATGGCTTCTAAATTATGTCTCCAACTCTTCCTCCTCCTCCTCCTCGCCTTCATTGCACCTCACGTGATCTCGGCACGTGATCTTGACATCCACAAATCTTCTCGCCCTCTATTTCCCAAGCATCTTCAAGGAAGTCGCAAAGGCGACAAGCTCGGAGGAATCCACAGCGTCAAGACGTACCTACAACGTTACGGTTACTTGAGCAAAAACAATTCCCATGCAGACGCATTCGACGAGCCCTTGGAATCCGCCGTTAAGAGATACCAAAAATTCTTCAAGCTCAACGCGAGCGGGATTTTGGACAAGGAGACGCTAGCTCAAATGTCGAAGAATCGATAA

Protein sequence

MASKLCLQLFLLLLLAFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDKLGGIHSVKTYLQRYGYLSKNNSHADAFDEPLESAVKRYQKFFKLNASGILDKETLAQMSKNR

Homology

[Close]

BLAST of Spg039879 vs. NCBI nr
Match: KAA0037452.1 (metalloendoproteinase 3-MMP-like [Cucumis melo var. makuwa] >TYK01926.1 metalloendoproteinase 3-MMP-like [Cucumis melo var. makuwa])

HSP 1 Score: 142.9 bits (359), Expect = 1.7e-30
Identity = 77/115 (66.96%), Postives = 86/115 (74.78%), Query Frame = 0


Query: 1   MASKLCLQLFLLLLLAFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDKLGGIHSVKTY 60
           MASKLCLQLF  LL AFI PH+ SAR L  HK SR LFP+HL GSRK D   GIH VK Y
Sbjct: 1   MASKLCLQLF--LLFAFITPHLTSARHLRNHKPSRLLFPEHLIGSRKNDNFEGIHKVKAY 60

Query: 61  LQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNASGILDKETLAQMSKNR 113
           LQRYGYLS   +NN   DAFD+ LESA+K YQK FKLN SG+LD+ETL QM++ R
Sbjct: 61  LQRYGYLSDEKENNLSTDAFDDDLESAIKSYQKVFKLNVSGVLDRETLQQMARPR 113

[Close]

BLAST of Spg039879 vs. NCBI nr
Match: XP_008458911.1 (PREDICTED: metalloendoproteinase 3-MMP-like [Cucumis melo])

HSP 1 Score: 141.0 bits (354), Expect = 6.4e-30
Identity = 76/115 (66.09%), Postives = 85/115 (73.91%), Query Frame = 0


Query: 1   MASKLCLQLFLLLLLAFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDKLGGIHSVKTY 60
           M SKLCLQLF  LL AFI PH+ SAR L  HK SR LFP+HL GSRK D   GIH VK Y
Sbjct: 1   MGSKLCLQLF--LLFAFITPHLTSARHLRNHKPSRLLFPEHLIGSRKNDNFEGIHKVKAY 60

Query: 61  LQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNASGILDKETLAQMSKNR 113
           LQRYGYLS   +NN   DAFD+ LESA+K YQK FKLN SG+LD+ETL QM++ R
Sbjct: 61  LQRYGYLSDEKENNLSIDAFDDDLESAIKSYQKVFKLNVSGVLDRETLQQMARPR 113

[Close]

BLAST of Spg039879 vs. NCBI nr
Match: XP_004142466.2 (metalloendoproteinase 2-MMP [Cucumis sativus] >KGN52408.1 hypothetical protein Csa_008745 [Cucumis sativus])

HSP 1 Score: 134.0 bits (336), Expect = 7.8e-28
Identity = 74/116 (63.79%), Postives = 85/116 (73.28%), Query Frame = 0


Query: 1   MASKLCLQLFLLLLLAFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDKL-GGIHSVKT 60
           MA+KLCLQLF  LLLAF+ PH+ SAR L  HKSSR LFP+HL GS K D +  GIH VK 
Sbjct: 1   MAAKLCLQLF--LLLAFVTPHLTSARPLHNHKSSRLLFPEHLIGSSKNDSIVEGIHKVKA 60

Query: 61  YLQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNASGILDKETLAQMSKNR 113
           YLQRYGY S   +NN   DAFD+ LESA+K YQKF  L  SG+LD+ETL QMS+ R
Sbjct: 61  YLQRYGYFSNENENNLSTDAFDDDLESAIKSYQKFSNLKVSGVLDRETLQQMSRPR 114

[Close]

BLAST of Spg039879 vs. NCBI nr
Match: XP_008458912.1 (PREDICTED: metalloendoproteinase 3-MMP-like [Cucumis melo] >KAA0037453.1 metalloendoproteinase 3-MMP-like [Cucumis melo var. makuwa] >TYK01927.1 metalloendoproteinase 3-MMP-like [Cucumis melo var. makuwa])

HSP 1 Score: 133.7 bits (335), Expect = 1.0e-27
Identity = 76/116 (65.52%), Postives = 84/116 (72.41%), Query Frame = 0


Query: 1   MASKLCLQLFLLLLLAFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDKL-GGIHSVKT 60
           MASKLCLQLF  LLLAFI PH+ SAR L  HK S  LFPKHL GS K D +  GIH VK 
Sbjct: 1   MASKLCLQLF--LLLAFITPHLTSARHLHNHKPSPFLFPKHLIGSSKNDSIVEGIHKVKA 60

Query: 61  YLQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNASGILDKETLAQMSKNR 113
           YLQRYGYLS   +NN   DAFD+ LESA+K YQKF K+  SG+LD+ETL QMS  R
Sbjct: 61  YLQRYGYLSNENENNLSTDAFDDDLESAIKSYQKFSKIKVSGVLDRETLQQMSTPR 114

[Close]

BLAST of Spg039879 vs. NCBI nr
Match: XP_008458913.1 (PREDICTED: metalloendoproteinase 5-MMP-like [Cucumis melo])

HSP 1 Score: 133.3 bits (334), Expect = 1.3e-27
Identity = 74/116 (63.79%), Postives = 83/116 (71.55%), Query Frame = 0


Query: 1   MASKLCLQLFLLLLLAFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDKL-GGIHSVKT 60
           MASKLCLQLF  LLLAF+ PH+ SAR L  HK SR LFP+HL GS K D +  GIH VK 
Sbjct: 1   MASKLCLQLF--LLLAFVTPHLTSARHLHNHKPSRLLFPEHLIGSSKNDNIVEGIHKVKA 60

Query: 61  YLQRYGYLSKNNSH---ADAFDEPLESAVKRYQKFFKLNASGILDKETLAQMSKNR 113
           YLQRYGY S  N++    D FD  LESA+K YQKF KL  SG+LD+ETL QMSK R
Sbjct: 61  YLQRYGYFSNENANTLSTDVFDNDLESAIKSYQKFSKLKVSGVLDRETLQQMSKPR 114

[Close]

BLAST of Spg039879 vs. ExPASy Swiss-Prot
Match: Q9ZUJ5 (Metalloendoproteinase 5-MMP OS=Arabidopsis thaliana OX=3702 GN=5MMP PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-08
Identity = 40/116 (34.48%), Postives = 58/116 (50.00%), Query Frame = 0


Query: 9   LFLLLLLAFIAPHVISARDLDIHKSSRPL------------FPKHLQGSRKGDKLGGIHS 68
           L L +L+ F   + ISA+      S  PL            F K L G   G+ + G+  
Sbjct: 4   LLLTILIFFFTVNPISAKFYTNVSSIPPLQFLNATQNAWETFSK-LAGCHIGENINGLSK 63

Query: 69  VKTYLQRYGYLSKNNSHADAFDEPLESAVKRYQKFFKLNASGILDKETLAQMSKNR 113
           +K Y +R+GY++   +  D FD+ L+SA+  YQK F L  +G LD  TL Q+ K R
Sbjct: 64  LKQYFRRFGYITTTGNCTDDFDDVLQSAINTYQKNFNLKVTGKLDSSTLRQIVKPR 118

[Close]

BLAST of Spg039879 vs. ExPASy Swiss-Prot
Match: Q5XF51 (Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana OX=3702 GN=3MMP PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.1e-07
Identity = 35/111 (31.53%), Postives = 60/111 (54.05%), Query Frame = 0


Query: 12  LLLLAFIAPHVISARDLDIHKSSRPLFPKHLQ--------------GSRKGDKLGGIHSV 71
           ++ L F AP  +SA     + +S  + P+ L+              G   G K  G++ +
Sbjct: 8   MVFLLFFAPSPVSA---GFYTNSSAIPPQLLRNATGNPWNSFLNFTGCHAGKKYDGLYML 67

Query: 72  KTYLQRYGYLSKNN---SHADAFDEPLESAVKRYQKFFKLNASGILDKETL 106
           K Y Q +GY+++ N   +  D FD+ L++AV+ YQ+ F+LN +G+LD+ TL
Sbjct: 68  KQYFQHFGYITETNLSGNFTDDFDDILKNAVEMYQRNFQLNVTGVLDELTL 115

[Close]

BLAST of Spg039879 vs. ExPASy Swiss-Prot
Match: O04529 (Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana OX=3702 GN=2MMP PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.5e-05
Identity = 24/64 (37.50%), Postives = 39/64 (60.94%), Query Frame = 0


Query: 44  GSRKGDKLGGIHSVKTYLQRYGYLSK--NNSHADAFDEPLESAVKRYQKFFKLNASGILD 103
           G   G  + G++ +K Y QR+GY+ +  + +  D FD+ L++AV+ YQ  F LN +G LD
Sbjct: 49  GCHHGQNVDGLYRIKKYFQRFGYIPETFSGNFTDDFDDILKAAVELYQTNFNLNVTGELD 108

Query: 104 KETL 106
             T+
Sbjct: 109 ALTI 112

[Close]

BLAST of Spg039879 vs. ExPASy Swiss-Prot
Match: P29136 (Metalloendoproteinase 1 OS=Glycine max OX=3847 PE=1 SV=2)

HSP 1 Score: 49.3 bits (116), Expect = 3.3e-05
Identity = 25/65 (38.46%), Postives = 33/65 (50.77%), Query Frame = 0


Query: 48  GDKLGGIHSVKTYLQRYGYLSKNNSHADAFDEPLESAVKRYQKFFKLNASGILDKETLAQ 107
           G    G+ +VK Y    GY+       D FD+ L SA+K YQK + LN +G  D  TL Q
Sbjct: 48  GQNYKGLSNVKNYFHHLGYIPNAPHFDDNFDDTLVSAIKTYQKNYNLNVTGKFDINTLKQ 107

Query: 108 MSKNR 113
           +   R
Sbjct: 108 IMTPR 112

[Close]

BLAST of Spg039879 vs. ExPASy TrEMBL
Match: A0A5D3BUL7 (Metalloendoproteinase 3-MMP-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G00140 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 8.1e-31
Identity = 77/115 (66.96%), Postives = 86/115 (74.78%), Query Frame = 0


Query: 1   MASKLCLQLFLLLLLAFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDKLGGIHSVKTY 60
           MASKLCLQLF  LL AFI PH+ SAR L  HK SR LFP+HL GSRK D   GIH VK Y
Sbjct: 1   MASKLCLQLF--LLFAFITPHLTSARHLRNHKPSRLLFPEHLIGSRKNDNFEGIHKVKAY 60

Query: 61  LQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNASGILDKETLAQMSKNR 113
           LQRYGYLS   +NN   DAFD+ LESA+K YQK FKLN SG+LD+ETL QM++ R
Sbjct: 61  LQRYGYLSDEKENNLSTDAFDDDLESAIKSYQKVFKLNVSGVLDRETLQQMARPR 113

[Close]

BLAST of Spg039879 vs. ExPASy TrEMBL
Match: A0A1S3C8Z2 (metalloendoproteinase 3-MMP-like OS=Cucumis melo OX=3656 GN=LOC103498174 PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 3.1e-30
Identity = 76/115 (66.09%), Postives = 85/115 (73.91%), Query Frame = 0


Query: 1   MASKLCLQLFLLLLLAFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDKLGGIHSVKTY 60
           M SKLCLQLF  LL AFI PH+ SAR L  HK SR LFP+HL GSRK D   GIH VK Y
Sbjct: 1   MGSKLCLQLF--LLFAFITPHLTSARHLRNHKPSRLLFPEHLIGSRKNDNFEGIHKVKAY 60

Query: 61  LQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNASGILDKETLAQMSKNR 113
           LQRYGYLS   +NN   DAFD+ LESA+K YQK FKLN SG+LD+ETL QM++ R
Sbjct: 61  LQRYGYLSDEKENNLSIDAFDDDLESAIKSYQKVFKLNVSGVLDRETLQQMARPR 113

[Close]

BLAST of Spg039879 vs. ExPASy TrEMBL
Match: A0A0A0KS35 (ZnMc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G632070 PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 3.8e-28
Identity = 74/116 (63.79%), Postives = 85/116 (73.28%), Query Frame = 0


Query: 1   MASKLCLQLFLLLLLAFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDKL-GGIHSVKT 60
           MA+KLCLQLF  LLLAF+ PH+ SAR L  HKSSR LFP+HL GS K D +  GIH VK 
Sbjct: 1   MAAKLCLQLF--LLLAFVTPHLTSARPLHNHKSSRLLFPEHLIGSSKNDSIVEGIHKVKA 60

Query: 61  YLQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNASGILDKETLAQMSKNR 113
           YLQRYGY S   +NN   DAFD+ LESA+K YQKF  L  SG+LD+ETL QMS+ R
Sbjct: 61  YLQRYGYFSNENENNLSTDAFDDDLESAIKSYQKFSNLKVSGVLDRETLQQMSRPR 114

[Close]

BLAST of Spg039879 vs. ExPASy TrEMBL
Match: A0A5D3BRA5 (Metalloendoproteinase 3-MMP-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G00150 PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 4.9e-28
Identity = 76/116 (65.52%), Postives = 84/116 (72.41%), Query Frame = 0


Query: 1   MASKLCLQLFLLLLLAFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDKL-GGIHSVKT 60
           MASKLCLQLF  LLLAFI PH+ SAR L  HK S  LFPKHL GS K D +  GIH VK 
Sbjct: 1   MASKLCLQLF--LLLAFITPHLTSARHLHNHKPSPFLFPKHLIGSSKNDSIVEGIHKVKA 60

Query: 61  YLQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNASGILDKETLAQMSKNR 113
           YLQRYGYLS   +NN   DAFD+ LESA+K YQKF K+  SG+LD+ETL QMS  R
Sbjct: 61  YLQRYGYLSNENENNLSTDAFDDDLESAIKSYQKFSKIKVSGVLDRETLQQMSTPR 114

[Close]

BLAST of Spg039879 vs. ExPASy TrEMBL
Match: A0A1S3C9J1 (metalloendoproteinase 3-MMP-like OS=Cucumis melo OX=3656 GN=LOC103498175 PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 4.9e-28
Identity = 76/116 (65.52%), Postives = 84/116 (72.41%), Query Frame = 0


Query: 1   MASKLCLQLFLLLLLAFIAPHVISARDLDIHKSSRPLFPKHLQGSRKGDKL-GGIHSVKT 60
           MASKLCLQLF  LLLAFI PH+ SAR L  HK S  LFPKHL GS K D +  GIH VK 
Sbjct: 1   MASKLCLQLF--LLLAFITPHLTSARHLHNHKPSPFLFPKHLIGSSKNDSIVEGIHKVKA 60

Query: 61  YLQRYGYLS---KNNSHADAFDEPLESAVKRYQKFFKLNASGILDKETLAQMSKNR 113
           YLQRYGYLS   +NN   DAFD+ LESA+K YQKF K+  SG+LD+ETL QMS  R
Sbjct: 61  YLQRYGYLSNENENNLSTDAFDDDLESAIKSYQKFSKIKVSGVLDRETLQQMSTPR 114

[Close]

BLAST of Spg039879 vs. TAIR 10
Match: AT1G59970.1 (Matrixin family protein )

HSP 1 Score: 60.8 bits (146), Expect = 7.8e-10
Identity = 40/116 (34.48%), Postives = 58/116 (50.00%), Query Frame = 0


Query: 9   LFLLLLLAFIAPHVISARDLDIHKSSRPL------------FPKHLQGSRKGDKLGGIHS 68
           L L +L+ F   + ISA+      S  PL            F K L G   G+ + G+  
Sbjct: 4   LLLTILIFFFTVNPISAKFYTNVSSIPPLQFLNATQNAWETFSK-LAGCHIGENINGLSK 63

Query: 69  VKTYLQRYGYLSKNNSHADAFDEPLESAVKRYQKFFKLNASGILDKETLAQMSKNR 113
           +K Y +R+GY++   +  D FD+ L+SA+  YQK F L  +G LD  TL Q+ K R
Sbjct: 64  LKQYFRRFGYITTTGNCTDDFDDVLQSAINTYQKNFNLKVTGKLDSSTLRQIVKPR 118

[Close]

BLAST of Spg039879 vs. TAIR 10
Match: AT1G24140.1 (Matrixin family protein )

HSP 1 Score: 56.6 bits (135), Expect = 1.5e-08
Identity = 35/111 (31.53%), Postives = 60/111 (54.05%), Query Frame = 0


Query: 12  LLLLAFIAPHVISARDLDIHKSSRPLFPKHLQ--------------GSRKGDKLGGIHSV 71
           ++ L F AP  +SA     + +S  + P+ L+              G   G K  G++ +
Sbjct: 8   MVFLLFFAPSPVSA---GFYTNSSAIPPQLLRNATGNPWNSFLNFTGCHAGKKYDGLYML 67

Query: 72  KTYLQRYGYLSKNN---SHADAFDEPLESAVKRYQKFFKLNASGILDKETL 106
           K Y Q +GY+++ N   +  D FD+ L++AV+ YQ+ F+LN +G+LD+ TL
Sbjct: 68  KQYFQHFGYITETNLSGNFTDDFDDILKNAVEMYQRNFQLNVTGVLDELTL 115

[Close]

BLAST of Spg039879 vs. TAIR 10
Match: AT1G70170.1 (matrix metalloproteinase )

HSP 1 Score: 50.4 bits (119), Expect = 1.1e-06
Identity = 24/64 (37.50%), Postives = 39/64 (60.94%), Query Frame = 0


Query: 44  GSRKGDKLGGIHSVKTYLQRYGYLSK--NNSHADAFDEPLESAVKRYQKFFKLNASGILD 103
           G   G  + G++ +K Y QR+GY+ +  + +  D FD+ L++AV+ YQ  F LN +G LD
Sbjct: 49  GCHHGQNVDGLYRIKKYFQRFGYIPETFSGNFTDDFDDILKAAVELYQTNFNLNVTGELD 108

Query: 104 KETL 106
             T+
Sbjct: 109 ALTI 112

The following BLAST results are available for this feature:

BLAST of Spg039879 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0037452.1	1.7e-30	66.96	metalloendoproteinase 3-MMP-like [Cucumis melo var. makuwa] >TYK01926.1 metalloe...	[more]
XP_008458911.1	6.4e-30	66.09	PREDICTED: metalloendoproteinase 3-MMP-like [Cucumis melo]	[more]
XP_004142466.2	7.8e-28	63.79	metalloendoproteinase 2-MMP [Cucumis sativus] >KGN52408.1 hypothetical protein C...	[more]
XP_008458912.1	1.0e-27	65.52	PREDICTED: metalloendoproteinase 3-MMP-like [Cucumis melo] >KAA0037453.1 metallo...	[more]
XP_008458913.1	1.3e-27	63.79	PREDICTED: metalloendoproteinase 5-MMP-like [Cucumis melo]	[more]

BLAST of Spg039879 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZUJ5	1.1e-08	34.48	Metalloendoproteinase 5-MMP OS=Arabidopsis thaliana OX=3702 GN=5MMP PE=1 SV=1	[more]
Q5XF51	2.1e-07	31.53	Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana OX=3702 GN=3MMP PE=1 SV=1	[more]
O04529	1.5e-05	37.50	Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana OX=3702 GN=2MMP PE=1 SV=1	[more]
P29136	3.3e-05	38.46	Metalloendoproteinase 1 OS=Glycine max OX=3847 PE=1 SV=2	[more]

BLAST of Spg039879 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BUL7	8.1e-31	66.96	Metalloendoproteinase 3-MMP-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3C8Z2	3.1e-30	66.09	metalloendoproteinase 3-MMP-like OS=Cucumis melo OX=3656 GN=LOC103498174 PE=3 SV...	[more]
A0A0A0KS35	3.8e-28	63.79	ZnMc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G632070 PE=3 S...	[more]
A0A5D3BRA5	4.9e-28	65.52	Metalloendoproteinase 3-MMP-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3C9J1	4.9e-28	65.52	metalloendoproteinase 3-MMP-like OS=Cucumis melo OX=3656 GN=LOC103498175 PE=3 SV...	[more]

BLAST of Spg039879 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G59970.1	7.8e-10	34.48	Matrixin family protein	[more]
AT1G24140.1	1.5e-08	31.53	Matrixin family protein	[more]
AT1G70170.1	1.1e-06	37.50	matrix metalloproteinase	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036366	PGBD superfamily	GENE3D	1.10.101.10		coord: 53..112 e-value: 2.3E-17 score: 64.6
IPR002477	Peptidoglycan binding-like	PFAM	PF01471	PG_binding_1	coord: 54..108 e-value: 1.4E-15 score: 57.2
None	No IPR available	PANTHER	PTHR10201:SF272	METALLOENDOPROTEINASE 2-MMP-LIKE	coord: 24..112
None	No IPR available	PANTHER	PTHR10201	MATRIX METALLOPROTEINASE	coord: 24..112
IPR036365	PGBD-like superfamily	SUPERFAMILY	47090	PGBD-like	coord: 48..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg039879.1	Spg039879.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030574	collagen catabolic process
biological_process	GO:0030198	extracellular matrix organization
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004222	metalloendopeptidase activity