Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGAGGGCAGAAGAAACTTACAGAGAAACCAAGCAAGGAGAGGTTGAAGATAAAGATTCTATAGGCACAGCTTTGTTATCAGCTGGAACAGCATTGTTAATGGCAGCTTGTTTGAAGAAAGCTGTGGTTCTGTTCTTGGTTGAGCAATGGCGGATCTGGGTCTTCCTTGTCTTGAATCTCATCCTTGTAGCAATTTTCTTCACGTCCAGTCCTTCAAGTTACAGTGAAAGCCAAACCCAAGAGCCAAGTGCTAAAACAAATCAGAAGAAGATTAGAAACAGAGAGTGCAAGGAGCCTGAAAAAGTAGAAAAAGTTGAAATCAAACAACAACAGATGGATAAAGCAGAGGAAACTGAAGAACAAGAAGTAATTGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAAATTGGGTTGTCGAAAGAAGAGTTGAATGAGAGAGTGGAAGCTTTCATTGTGATGTTCAAGAAGCAATTGATTTCAGATGCGAGAAAAGTGGGAAACAGACGCACCCCATTGAGCTATAATACTCGATAG
mRNA sequence
ATGTGGAGGGCAGAAGAAACTTACAGAGAAACCAAGCAAGGAGAGGTTGAAGATAAAGATTCTATAGGCACAGCTTTGTTATCAGCTGGAACAGCATTGTTAATGGCAGCTTGTTTGAAGAAAGCTGTGGTTCTGTTCTTGGTTGAGCAATGGCGGATCTGGGTCTTCCTTGTCTTGAATCTCATCCTTGTAGCAATTTTCTTCACGTCCAGTCCTTCAAGTTACAGTGAAAGCCAAACCCAAGAGCCAAGTGCTAAAACAAATCAGAAGAAGATTAGAAACAGAGAGTGCAAGGAGCCTGAAAAAGTAGAAAAAGTTGAAATCAAACAACAACAGATGGATAAAGCAGAGGAAACTGAAGAACAAGAAGTAATTGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAAATTGGGTTGTCGAAAGAAGAGTTGAATGAGAGAGTGGAAGCTTTCATTGTGATGTTCAAGAAGCAATTGATTTCAGATGCGAGAAAAGTGGGAAACAGACGCACCCCATTGAGCTATAATACTCGATAG
Coding sequence (CDS)
ATGTGGAGGGCAGAAGAAACTTACAGAGAAACCAAGCAAGGAGAGGTTGAAGATAAAGATTCTATAGGCACAGCTTTGTTATCAGCTGGAACAGCATTGTTAATGGCAGCTTGTTTGAAGAAAGCTGTGGTTCTGTTCTTGGTTGAGCAATGGCGGATCTGGGTCTTCCTTGTCTTGAATCTCATCCTTGTAGCAATTTTCTTCACGTCCAGTCCTTCAAGTTACAGTGAAAGCCAAACCCAAGAGCCAAGTGCTAAAACAAATCAGAAGAAGATTAGAAACAGAGAGTGCAAGGAGCCTGAAAAAGTAGAAAAAGTTGAAATCAAACAACAACAGATGGATAAAGCAGAGGAAACTGAAGAACAAGAAGTAATTGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAAATTGGGTTGTCGAAAGAAGAGTTGAATGAGAGAGTGGAAGCTTTCATTGTGATGTTCAAGAAGCAATTGATTTCAGATGCGAGAAAAGTGGGAAACAGACGCACCCCATTGAGCTATAATACTCGATAG
Protein sequence
MWRAEETYRETKQGEVEDKDSIGTALLSAGTALLMAACLKKAVVLFLVEQWRIWVFLVLNLILVAIFFTSSPSSYSESQTQEPSAKTNQKKIRNRECKEPEKVEKVEIKQQQMDKAEETEEQEVIEEEEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARKVGNRRTPLSYNTR
Homology
BLAST of Spg039734 vs. NCBI nr
Match:
KAG7016160.1 (hypothetical protein SDJN02_21264, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 255.8 bits (652), Expect = 2.9e-64
Identity = 155/181 (85.64%), Postives = 166/181 (91.71%), Query Frame = 0
Query: 1 MWRAEETYRETKQGEVEDKDSIGTALLSAGTALLMAACLKKAVVLFLVEQWRIWVFLVLN 60
MWRAEE+YRE+KQ EVEDKDSIGTALLSAGTALLMAACLK+AVVLFLVEQWRIWVFL+LN
Sbjct: 1 MWRAEESYRESKQAEVEDKDSIGTALLSAGTALLMAACLKRAVVLFLVEQWRIWVFLLLN 60
Query: 61 LILVAIFFT---SSPSSYSESQTQEPSAKTNQKKIRNRECKEPEKVEKVEIKQQQMDKAE 120
LILVAIFFT SSPSSYSESQTQE +AK QKKI NRECKE EKVEK+EIK Q+ +K E
Sbjct: 61 LILVAIFFTSSPSSPSSYSESQTQEANAKIKQKKIENRECKEAEKVEKLEIKHQEREK-E 120
Query: 121 ETEEQEVIEEEEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARKVGNRRTPLSY 179
E EE+E+ EEEEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDAR+ GNRRTPLSY
Sbjct: 121 EEEEEELPEEEEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARRGGNRRTPLSY 180
BLAST of Spg039734 vs. NCBI nr
Match:
KAG6578611.1 (hypothetical protein SDJN03_23059, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 248.8 bits (634), Expect = 3.5e-62
Identity = 152/181 (83.98%), Postives = 162/181 (89.50%), Query Frame = 0
Query: 1 MWRAEETYRETKQGEVEDKDSIGTALLSAGTALLMAACLKKAVVLFLVEQWRIWVFLVLN 60
MWRAEE+YRE+KQ EVEDKDSIGTALLSAGTALLMAACLK+AVVLFLVEQWRIWVFL+LN
Sbjct: 1 MWRAEESYRESKQAEVEDKDSIGTALLSAGTALLMAACLKRAVVLFLVEQWRIWVFLLLN 60
Query: 61 LILVAIFFT---SSPSSYSESQTQEPSAKTNQKKIRNRECKEPEKVEKVEIKQQQMDKAE 120
LILVAIFFT SSPSSYSESQTQE +AK QKKI NRECKE EKVEK+EIK Q+ +K E
Sbjct: 61 LILVAIFFTSSPSSPSSYSESQTQEANAKIKQKKIENRECKEAEKVEKLEIKHQEREKEE 120
Query: 121 ETEEQEVIEEEEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARKVGNRRTPLSY 179
E EE+ EEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDAR+ GNRRTPLSY
Sbjct: 121 EEEEE---LPEEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARRGGNRRTPLSY 178
BLAST of Spg039734 vs. NCBI nr
Match:
XP_022134128.1 (coiled-coil domain-containing glutamate-rich protein 1 [Momordica charantia])
HSP 1 Score: 234.2 bits (596), Expect = 8.9e-58
Identity = 143/181 (79.01%), Postives = 159/181 (87.85%), Query Frame = 0
Query: 1 MWRAEETYRETKQGEVEDKDSIGTALLSAGTALLMAACLKKAVVLFLVEQWRIWVFLVLN 60
MW+AEE YRETKQGEVEDKDS+GT LLSAGTALLMAACLK+AVVLFLVEQWR+WVFLVLN
Sbjct: 1 MWKAEENYRETKQGEVEDKDSMGTVLLSAGTALLMAACLKRAVVLFLVEQWRVWVFLVLN 60
Query: 61 LILVAIFFTSSPSSYSESQTQEPSAKTNQKKIRNRECK-EPEKVEKVEIKQQQMDKAEET 120
LI+VAIFFTSSPS+Y ES Q+PS QKKI++RECK EKVEKVE K Q+MDK EE
Sbjct: 61 LIVVAIFFTSSPSNYRES--QDPSVGKKQKKIKDRECKVAEEKVEKVEAKPQEMDKEEEI 120
Query: 121 EEQEVIEEEEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARKVGNRRTPLSYNT 180
EE+E IEEEEEEEEEE+ ++GLSKEELNERVEAFIVMFK+QLI DARK GN TPLSYN+
Sbjct: 121 EEEE-IEEEEEEEEEEDADVGLSKEELNERVEAFIVMFKQQLILDARKGGNSHTPLSYNS 178
BLAST of Spg039734 vs. NCBI nr
Match:
XP_038890929.1 (uncharacterized protein LOC120080357 [Benincasa hispida])
HSP 1 Score: 219.5 bits (558), Expect = 2.3e-53
Identity = 138/178 (77.53%), Postives = 146/178 (82.02%), Query Frame = 0
Query: 1 MWRAEETYRETKQGEVEDKDSIGTALLSAGTALLMAACLKKAVVLFLVEQWRIWVFLVLN 60
MWRAEE+YRE KQGEVEDKDSIG LLSAGTALLMAACLKKAVV+FLVEQWRIWVFLVLN
Sbjct: 1 MWRAEESYRELKQGEVEDKDSIGNVLLSAGTALLMAACLKKAVVMFLVEQWRIWVFLVLN 60
Query: 61 LILVAIFFTSSPSSYSESQTQEPSAKTNQKKIRNRECKEPEKVEKVEIKQQQMDKAEETE 120
LILVAIFFTSSP+SYSE+Q +E QKKI+NRE KE EK EIK E
Sbjct: 61 LILVAIFFTSSPASYSENQNEE----AKQKKIKNRELKE---AEKTEIK----------E 120
Query: 121 EQEVIEEEEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARKVGNRRTPLSYN 179
E+E+ EEE EEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARK NR TP SYN
Sbjct: 121 EEEIEEEEIEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARKGRNRSTPFSYN 161
BLAST of Spg039734 vs. NCBI nr
Match:
XP_022959957.1 (uncharacterized protein LOC111460852 [Cucurbita moschata] >KAG6602469.1 hypothetical protein SDJN03_07702, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033143.1 hypothetical protein SDJN02_07196, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 216.1 bits (549), Expect = 2.5e-52
Identity = 138/181 (76.24%), Postives = 149/181 (82.32%), Query Frame = 0
Query: 1 MWRAEETYRETKQGEVEDKDSIGTALLSAGTALLMAACLKKAVVL-FLVEQWRIWVFLVL 60
MWRAEE RE+KQGEVEDKD +LSAGTALLMAACLK+AVVL FLVEQWRIWVFL L
Sbjct: 1 MWRAEEGCRESKQGEVEDKDCTSRGVLSAGTALLMAACLKRAVVLFFLVEQWRIWVFLAL 60
Query: 61 NLILVAIFFTSSPSSYSESQTQEPSAKTNQKKIRNRECKEPEKVEKVEIKQQQMDKAEET 120
NLILV IFFTSSP+SYSESQTQEP T +KKIR+ EPEKVE+VEIKQQ+MDK
Sbjct: 61 NLILVTIFFTSSPASYSESQTQEP---TKKKKIRS---SEPEKVEEVEIKQQEMDK---- 120
Query: 121 EEQEVIEEEEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARKVGNRRTPLSYNT 180
EEE EE+EEEE IGLSKEELNERVEAFIVMFKKQLISDARKVG+RRTPLSY T
Sbjct: 121 -------EEEIEEDEEEEVIGLSKEELNERVEAFIVMFKKQLISDARKVGSRRTPLSYKT 164
BLAST of Spg039734 vs. ExPASy TrEMBL
Match:
A0A6J1C149 (coiled-coil domain-containing glutamate-rich protein 1 OS=Momordica charantia OX=3673 GN=LOC111006473 PE=4 SV=1)
HSP 1 Score: 234.2 bits (596), Expect = 4.3e-58
Identity = 143/181 (79.01%), Postives = 159/181 (87.85%), Query Frame = 0
Query: 1 MWRAEETYRETKQGEVEDKDSIGTALLSAGTALLMAACLKKAVVLFLVEQWRIWVFLVLN 60
MW+AEE YRETKQGEVEDKDS+GT LLSAGTALLMAACLK+AVVLFLVEQWR+WVFLVLN
Sbjct: 1 MWKAEENYRETKQGEVEDKDSMGTVLLSAGTALLMAACLKRAVVLFLVEQWRVWVFLVLN 60
Query: 61 LILVAIFFTSSPSSYSESQTQEPSAKTNQKKIRNRECK-EPEKVEKVEIKQQQMDKAEET 120
LI+VAIFFTSSPS+Y ES Q+PS QKKI++RECK EKVEKVE K Q+MDK EE
Sbjct: 61 LIVVAIFFTSSPSNYRES--QDPSVGKKQKKIKDRECKVAEEKVEKVEAKPQEMDKEEEI 120
Query: 121 EEQEVIEEEEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARKVGNRRTPLSYNT 180
EE+E IEEEEEEEEEE+ ++GLSKEELNERVEAFIVMFK+QLI DARK GN TPLSYN+
Sbjct: 121 EEEE-IEEEEEEEEEEDADVGLSKEELNERVEAFIVMFKQQLILDARKGGNSHTPLSYNS 178
BLAST of Spg039734 vs. ExPASy TrEMBL
Match:
A0A6J1H605 (uncharacterized protein LOC111460852 OS=Cucurbita moschata OX=3662 GN=LOC111460852 PE=4 SV=1)
HSP 1 Score: 216.1 bits (549), Expect = 1.2e-52
Identity = 138/181 (76.24%), Postives = 149/181 (82.32%), Query Frame = 0
Query: 1 MWRAEETYRETKQGEVEDKDSIGTALLSAGTALLMAACLKKAVVL-FLVEQWRIWVFLVL 60
MWRAEE RE+KQGEVEDKD +LSAGTALLMAACLK+AVVL FLVEQWRIWVFL L
Sbjct: 1 MWRAEEGCRESKQGEVEDKDCTSRGVLSAGTALLMAACLKRAVVLFFLVEQWRIWVFLAL 60
Query: 61 NLILVAIFFTSSPSSYSESQTQEPSAKTNQKKIRNRECKEPEKVEKVEIKQQQMDKAEET 120
NLILV IFFTSSP+SYSESQTQEP T +KKIR+ EPEKVE+VEIKQQ+MDK
Sbjct: 61 NLILVTIFFTSSPASYSESQTQEP---TKKKKIRS---SEPEKVEEVEIKQQEMDK---- 120
Query: 121 EEQEVIEEEEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARKVGNRRTPLSYNT 180
EEE EE+EEEE IGLSKEELNERVEAFIVMFKKQLISDARKVG+RRTPLSY T
Sbjct: 121 -------EEEIEEDEEEEVIGLSKEELNERVEAFIVMFKKQLISDARKVGSRRTPLSYKT 164
BLAST of Spg039734 vs. ExPASy TrEMBL
Match:
A0A1S3C9Q4 (ABC transporter F family member 4 OS=Cucumis melo OX=3656 GN=LOC103498035 PE=4 SV=1)
HSP 1 Score: 193.0 bits (489), Expect = 1.1e-45
Identity = 132/180 (73.33%), Postives = 144/180 (80.00%), Query Frame = 0
Query: 1 MWRAEETYRETKQ-GEVEDKDSIGTALLSAGTALLMAACLKKAVVLFLVEQWRIWVFLVL 60
MWR EE RE KQ GE EDKDSI ALLSAGTALLMA CLKKAVV+FLVEQWRIWVFL L
Sbjct: 1 MWRTEEINRELKQGGEFEDKDSIRNALLSAGTALLMATCLKKAVVMFLVEQWRIWVFLAL 60
Query: 61 NLILVAIFFTSSPSSYSESQTQEPSAKTNQKKIRNRECKEPEKVEKVEIKQQQMDKAEET 120
NLILVAIFFTS+P++YSE+Q QE S KT QKK N E KE +K E+ + KQ++ + E
Sbjct: 61 NLILVAIFFTSNPANYSETQKQETSGKTKQKKTENIELKEAKK-EEDKTKQKKTENREFK 120
Query: 121 E-EQEVIEEEEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARKVGNRRTPLSYN 179
E +E E EEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARK GNR LSYN
Sbjct: 121 EARKEEDEIEEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARKGGNR---LSYN 176
BLAST of Spg039734 vs. ExPASy TrEMBL
Match:
A0A0A0KVE3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G633200 PE=4 SV=1)
HSP 1 Score: 179.5 bits (454), Expect = 1.3e-41
Identity = 129/186 (69.35%), Postives = 146/186 (78.49%), Query Frame = 0
Query: 1 MWRAEETYRETKQ-GEVEDKDSIGTALLSAGTALLMAACLKK-AVVLFLVEQWRIWVFLV 60
MWR EE RE KQ GE EDKDSI ALLSAGTALLMA CLKK AVV+FLVEQWRIWVFLV
Sbjct: 1 MWRTEEINRELKQGGEFEDKDSIRNALLSAGTALLMATCLKKLAVVMFLVEQWRIWVFLV 60
Query: 61 LNLILVAIFFTS---SPSSYSESQTQEPSAKTNQKKIRNRECKEPEKVEKVEIKQQQMDK 120
LNLILVAIFFTS +P++YSE+Q QE S KT KKI RE +E +K E+ + KQ++++
Sbjct: 61 LNLILVAIFFTSNPANPANYSETQKQETSGKTKLKKIEKRELEEAKK-EEDKTKQKKIEN 120
Query: 121 AEETE---EQEVIEEEEEEEEEEEEEIGLSKEELNERVEAFIVMFKKQLISDARKVGNRR 179
E E E++ I+EE+E EEEEEEEI LSKEELNERVEAFIVMFKKQLISDARK GNR
Sbjct: 121 REIKEAIKEEDEIKEEDEIEEEEEEEIELSKEELNERVEAFIVMFKKQLISDARKGGNR- 180
BLAST of Spg039734 vs. ExPASy TrEMBL
Match:
A0A6J1JR04 (uncharacterized protein LOC111487056 OS=Cucurbita maxima OX=3661 GN=LOC111487056 PE=4 SV=1)
HSP 1 Score: 153.7 bits (387), Expect = 7.4e-34
Identity = 108/146 (73.97%), Postives = 116/146 (79.45%), Query Frame = 0
Query: 35 MAACLKKAVVL-FLVEQWRIWVFLVLNLILVAIFFTSSPSSYSESQTQEPSAKTNQKKIR 94
MAACLK+AVVL FLVEQWRIWVFLVLNLILV IFFTSSP+SYSE+Q QEP T +KKIR
Sbjct: 1 MAACLKRAVVLFFLVEQWRIWVFLVLNLILVTIFFTSSPASYSENQIQEP---TKKKKIR 60
Query: 95 NRECKEPEKVEKVEIKQQQMDKAEETEEQEVIEEEEEEEEEEEEEIGLSKE------ELN 154
N EPEKVE+VEIKQQ++ K EEE EE+EEEEEIGLSKE ELN
Sbjct: 61 N---SEPEKVEEVEIKQQEIGK-----------EEEIEEDEEEEEIGLSKEELNERVELN 120
Query: 155 ERVEAFIVMFKKQLISDARKVGNRRT 174
ERVEAFIVMFKKQLISDARKVGNRRT
Sbjct: 121 ERVEAFIVMFKKQLISDARKVGNRRT 129
BLAST of Spg039734 vs. TAIR 10
Match:
AT3G28420.1 (Putative membrane lipoprotein )
HSP 1 Score: 49.3 bits (116), Expect = 3.8e-06
Identity = 68/193 (35.23%), Postives = 103/193 (53.37%), Query Frame = 0
Query: 10 ETKQGEVEDKDSIGTALLSAGTALLMAACLKKAVVLFLVEQWRIWVFLVLNLILVAIFFT 69
E K+ +++++ T+LL+A L MA + V +L+EQWR VFL+LN++L+A++FT
Sbjct: 2 EMKRDIRVEEENMCTSLLTAVVVLSMACLKHFSSVSYLIEQWRSLVFLILNVVLLAVYFT 61
Query: 70 SSPSSYSES------------QTQEPSAKTNQKKIR---NREC-------KEPEKVEK-- 129
S+ + S +E K +KK R C EP++V K
Sbjct: 62 STRPNLGRSHDFKTRRGGRLRMMREKKNKIKKKKTRVVVEPACFDQGFLLVEPKEVIKKC 121
Query: 130 --VEIKQQQMDKAEETEEQEVIEEEEEE---EEEEEEEIGLSKEELNERVEAFIVMFKKQ 174
VE ++ K EET + + ++E E EE+E E LS EELNERVEAFI F++
Sbjct: 122 VLVEETKRVCPKFEETVKDCLFHKKEIEYNGEEDEFEPGRLSNEELNERVEAFITTFRQH 181
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7016160.1 | 2.9e-64 | 85.64 | hypothetical protein SDJN02_21264, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAG6578611.1 | 3.5e-62 | 83.98 | hypothetical protein SDJN03_23059, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022134128.1 | 8.9e-58 | 79.01 | coiled-coil domain-containing glutamate-rich protein 1 [Momordica charantia] | [more] |
XP_038890929.1 | 2.3e-53 | 77.53 | uncharacterized protein LOC120080357 [Benincasa hispida] | [more] |
XP_022959957.1 | 2.5e-52 | 76.24 | uncharacterized protein LOC111460852 [Cucurbita moschata] >KAG6602469.1 hypothet... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1C149 | 4.3e-58 | 79.01 | coiled-coil domain-containing glutamate-rich protein 1 OS=Momordica charantia OX... | [more] |
A0A6J1H605 | 1.2e-52 | 76.24 | uncharacterized protein LOC111460852 OS=Cucurbita moschata OX=3662 GN=LOC1114608... | [more] |
A0A1S3C9Q4 | 1.1e-45 | 73.33 | ABC transporter F family member 4 OS=Cucumis melo OX=3656 GN=LOC103498035 PE=4 S... | [more] |
A0A0A0KVE3 | 1.3e-41 | 69.35 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G633200 PE=4 SV=1 | [more] |
A0A6J1JR04 | 7.4e-34 | 73.97 | uncharacterized protein LOC111487056 OS=Cucurbita maxima OX=3661 GN=LOC111487056... | [more] |
Match Name | E-value | Identity | Description | |
AT3G28420.1 | 3.8e-06 | 35.23 | Putative membrane lipoprotein | [more] |