Spg039626 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTCACCAGTTCTCCTCTGGTTCTCATCGCAATCCTCTCAAAATCTCCTTAGTTCATTAAAAAAAGATTTGGAGTCCGAGGCTTAGGCTAAGGCAAACTTCTGCAAGAACTGGCTAACTCTCAGGGAATTCTGGAGGAAGAAGATTCCAGTAATCAAAGGGTGGTTCTCGCCCTATATGAGGCCTTAAGCTCTCGAAACGTGAACACTGTTCACCAAATCCTCGCCCCCGATCTCGAGTGGTGGTTCCATGGTCCGCCGTCCCACCAATTTCTGATGCGCCTTCTCACTGGAGCCTCATCCAACGGCCAATCCTTCCAGTTCGTTCCTCAATCGATCACTTCCTTCGGCCCCACCGTCCTCGTCGAAGGCTGCGATCCTACCCGTTCCATCTCCTGGATCCACGCTTGGACCATCACTGATGGGATAATCACTCAGGTTCGCGAATATTTCAATACCTCTCTCACTGTTACTCGCCTCGGAAATCCAACCGACTCTCCCTCGTCCTCCTCCGCCGCGTCGGAGATTTCCTCCGCCTCGTCGCTGCACCATTGCCCTTCCGTTTGGGAAAGTACTCTCTCCAATCAGGTCGGAAAATCGGTGCCTGGGCTCGTCCTGGCCATATAA ATGCCTCACCAGTTCTCCTCTGGTTCTCATCGCAATCCTCTCAAAATCTCCTTAGGAATTCTGGAGGAAGAAGATTCCAGTAATCAAAGGGTGGTTCTCGCCCTATATGAGGCCTTAAGCTCTCGAAACGTGAACACTGTTCACCAAATCCTCGCCCCCGATCTCGAGTGGTGGTTCCATGGTCCGCCGTCCCACCAATTTCTGATGCGCCTTCTCACTGGAGCCTCATCCAACGGCCAATCCTTCCAGTTCGTTCCTCAATCGATCACTTCCTTCGGCCCCACCGTCCTCGTCGAAGGCTGCGATCCTACCCGTTCCATCTCCTGGATCCACGCTTGGACCATCACTGATGGGATAATCACTCAGGTTCGCGAATATTTCAATACCTCTCTCACTGTTACTCGCCTCGGAAATCCAACCGACTCTCCCTCGTCCTCCTCCGCCGCGTCGGAGATTTCCTCCGCCTCGTCGCTGCACCATTGCCCTTCCGTTTGGGAAAGTACTCTCTCCAATCAGGTCGGAAAATCGGTGCCTGGGCTCGTCCTGGCCATATAA ATGCCTCACCAGTTCTCCTCTGGTTCTCATCGCAATCCTCTCAAAATCTCCTTAGGAATTCTGGAGGAAGAAGATTCCAGTAATCAAAGGGTGGTTCTCGCCCTATATGAGGCCTTAAGCTCTCGAAACGTGAACACTGTTCACCAAATCCTCGCCCCCGATCTCGAGTGGTGGTTCCATGGTCCGCCGTCCCACCAATTTCTGATGCGCCTTCTCACTGGAGCCTCATCCAACGGCCAATCCTTCCAGTTCGTTCCTCAATCGATCACTTCCTTCGGCCCCACCGTCCTCGTCGAAGGCTGCGATCCTACCCGTTCCATCTCCTGGATCCACGCTTGGACCATCACTGATGGGATAATCACTCAGGTTCGCGAATATTTCAATACCTCTCTCACTGTTACTCGCCTCGGAAATCCAACCGACTCTCCCTCGTCCTCCTCCGCCGCGTCGGAGATTTCCTCCGCCTCGTCGCTGCACCATTGCCCTTCCGTTTGGGAAAGTACTCTCTCCAATCAGGTCGGAAAATCGGTGCCTGGGCTCGTCCTGGCCATATAA MPHQFSSGSHRNPLKISLGILEEEDSSNQRVVLALYEALSSRNVNTVHQILAPDLEWWFHGPPSHQFLMRLLTGASSNGQSFQFVPQSITSFGPTVLVEGCDPTRSISWIHAWTITDGIITQVREYFNTSLTVTRLGNPTDSPSSSSAASEISSASSLHHCPSVWESTLSNQVGKSVPGLVLAI Homology
BLAST of Spg039626 vs. NCBI nr
Match: KAG6602601.1 (Wound-induced protein 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 313.2 bits (801), Expect = 1.5e-81 Identity = 159/168 (94.64%), Postives = 163/168 (97.02%), Query Frame = 0
BLAST of Spg039626 vs. NCBI nr
Match: KAA0052041.1 (wound-induced protein 1 [Cucumis melo var. makuwa] >TYK04520.1 wound-induced protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 309.3 bits (791), Expect = 2.2e-80 Identity = 155/169 (91.72%), Postives = 164/169 (97.04%), Query Frame = 0
BLAST of Spg039626 vs. NCBI nr
Match: KAG7033280.1 (Wound-induced protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 308.9 bits (790), Expect = 2.9e-80 Identity = 157/168 (93.45%), Postives = 161/168 (95.83%), Query Frame = 0
BLAST of Spg039626 vs. NCBI nr
Match: KAE8646573.1 (hypothetical protein Csa_005623 [Cucumis sativus]) HSP 1 Score: 308.9 bits (790), Expect = 2.9e-80 Identity = 154/170 (90.59%), Postives = 165/170 (97.06%), Query Frame = 0
BLAST of Spg039626 vs. NCBI nr
Match: KAG7016029.1 (Wound-induced protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 307.4 bits (786), Expect = 8.5e-80 Identity = 155/183 (84.70%), Postives = 165/183 (90.16%), Query Frame = 0
BLAST of Spg039626 vs. ExPASy Swiss-Prot
Match: P20144 (Wound-induced protein 1 OS=Solanum tuberosum OX=4113 GN=WUN1 PE=2 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 1.2e-33 Identity = 75/117 (64.10%), Postives = 91/117 (77.78%), Query Frame = 0
BLAST of Spg039626 vs. ExPASy Swiss-Prot
Match: Q94AK6 (Senescence associated gene 20 OS=Arabidopsis thaliana OX=3702 GN=SAG20 PE=2 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 3.2e-29 Identity = 70/117 (59.83%), Postives = 83/117 (70.94%), Query Frame = 0
BLAST of Spg039626 vs. ExPASy TrEMBL
Match: A0A5D3BZG9 (Wound-induced protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001370 PE=4 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 1.1e-80 Identity = 155/169 (91.72%), Postives = 164/169 (97.04%), Query Frame = 0
BLAST of Spg039626 vs. ExPASy TrEMBL
Match: A0A6A1VMJ2 (Wound-induced protein 1 OS=Morella rubra OX=262757 GN=CJ030_MR5G017372 PE=4 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 1.5e-61 Identity = 128/173 (73.99%), Postives = 147/173 (84.97%), Query Frame = 0
BLAST of Spg039626 vs. ExPASy TrEMBL
Match: A0A314Y1I0 (Wound-induced protein 1-like OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_10679 PE=4 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 2.8e-60 Identity = 124/172 (72.09%), Postives = 143/172 (83.14%), Query Frame = 0
BLAST of Spg039626 vs. ExPASy TrEMBL
Match: A0A5D2KKV1 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D06G210900v1 PE=4 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 3.6e-60 Identity = 125/175 (71.43%), Postives = 144/175 (82.29%), Query Frame = 0
BLAST of Spg039626 vs. ExPASy TrEMBL
Match: A0A7J6HR99 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_023048 PE=4 SV=1) HSP 1 Score: 240.4 bits (612), Expect = 6.1e-60 Identity = 128/185 (69.19%), Postives = 145/185 (78.38%), Query Frame = 0
BLAST of Spg039626 vs. TAIR 10
Match: AT3G10985.1 (senescence associated gene 20 ) HSP 1 Score: 129.8 bits (325), Expect = 2.3e-30 Identity = 70/117 (59.83%), Postives = 83/117 (70.94%), Query Frame = 0
BLAST of Spg039626 vs. TAIR 10
Match: AT5G01740.1 (Nuclear transport factor 2 (NTF2) family protein ) HSP 1 Score: 106.7 bits (265), Expect = 2.0e-23 Identity = 62/163 (38.04%), Postives = 90/163 (55.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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