Spg039585 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTAGAGAGGCTTGCAGTGGGAGAAGCGAATTTGGATGCGGATTCTTCACCTATTGGGTTGTGCTTGGAAGTGTTGTGGCCGGGGAGCTTCACTGCAGATCTAATTGGTTTTGCATTTAGGTGTCGGACTGTCGACGCGATGCTTTGGTATGGGCGTTGTGCTGGGAGCTGAGAGCGTAAACGAACGGTCTGGTTTGGTTTTTTTTGTTTTTGGCTTTGGAGTATTCTCGGTGCTACCTGTGATTTTTGAAAATTTTCGGCACGAGACTTGGGGGATTTAGACATGAATCGTAGCTTTAGGGCTTTGGAATCGCAAATGCAAGCTCCGGTAAAGCAGCGGCAGCAGCAAGTTGGGGGACTGAGGGCGTCGGTGATGAAAGATAAGGAGGAGGAGCTTGCTTTGTTCTTAGAAATGAGAAAGCGTGAGAAAGAGAGGAATGATCTTCTCTCTAACAACGCGGAAGAGTTCGATGCGCCTTTAGGTATGGCCTCTGTTTCTAACTTTGGACTTGCACTTCAGCTGCTCTGAGGTTTTGCTTTATGGCATTGTTCTGGAAATTTCTAGAATTCGTCCTTGATTGATAGTTAAAAAGTTTTTGTAGCCCTCGTTTCTTTTGTCTATCAGATGAATACTGATCCAGAAAGAAAAGGAGTAATCCACCGTTTTCTTTGACGTCTATTTTTGCTTATTCTACTGGAATTACGTTTTATCGAATTCAATTTCCCGTTTTGTGCAGGAACAAAACCAGGAACTTCTCCAATATTTAACATCTCATCAGCGACTCCAGCCCCTACACGCAAGACTGGTGCTGATGATTTTCTTAATTCTGACAATGATAAAAATGATTATGATTGGTAAAGTTGTCACCTTACACTTTTCGTTTTAGTTTATTGAATGAAATTCCCTATTTGAAGATTGCTGTTTTTATCCTGGCTCAACCGATCATTCATAGTGTTGAGAATAACTCAATGTCTCGATATCAGTAATTGACTTGGGAGGGTTTCCAAATGAAACCACGTCAAATTAGTACCAGGCAGTAGATACTTATGCCAAAGGAAGGTAGATAGGAAGCTTGAAATTAGAACAAGTTCTTATTCAATGTATCTGGACTAACATCTACGAAAAAAATATAACACCATAACATGATTTAAGCTTACATTTGAGAAAAGATAAAATTAGGGCAAATGTCGTAATTTACCAATAAGGGTGTAATTAACAAGTCAATGAGACCAAGAAATTTTTTTAACAGGTCATTTAAACCAAATAAATTGCTAAAACAGTTGTGAAGATTGTGTTCATGCATTGCAATCTTTCACTCGATTAACTCATCAATGTCAAAGGCTGATCCAGTTGGTTGAATTTAACTAAGATGAAACGAGTCAGATCTTATCCTTCCATATTCCGTTATTTCTTGTTGTGGGATGGTGGCAATGTGCAAATGTAAAACGGTTTAAAGAACCTACCTGCCACCTGGTTTAATTTGTCAAATTGGTCCATTTTGTTTCATTGAAATGGCACATATGGTTCGTGATTTGTGTGCCATGTATATTAGTTTCATTAAGAAATAATAACAGGATTTTAGAGAAAGTAAAAACAAGTACAGAGTACTTAAAACCATTTTTGTTGACAAGAAACAATCTTTTTATTGATAAATGAAAAATAAAGAAAAAAGTTCAAGAATACCAACTCCTAAAGGGATTAAAAAGAAACCAAAACATCCCAATAAAGAACAAAACTCCAAATATTACAAGAGCCAAAAAATATAAAGGGTATGATTCGTAAATTATACAAACCACAATGGTGTAATTTGCAATCCTTTTTTATGTTGTATATCAGTTATCATATCTGTATCATTAGTATGAACTCAAAAAAAAAAAAATCTGTATCATTTGTAGCCTGAGAGAGAAATGAATGGATCAAAATTTTGAACCATGATGTAAAAGAGTGTGGCTCTGATGAGTTATGTTAGTGATCTGAGAGAGATATGAGTGGACCAATTTGTTGAGGATCTCCATTCTGTTCAGGTTTCTGCTATGGCACTTATGTTGGTCTCTTTACTTCTTCTACTTGATTATTACTTGTTTACGCCCTTGTTAAAAAAGGATTTTCTTTTATTTTCTATGATGAAATAAGCATTCAGTAGTTTCTGAAGACGTGGATAGACAAAATTTCAAGAAATCCTCTTGTTAACAGAGAACATCTACCCTAGTGTAGCTATTATTTAGTTGAAAGAACATGAGCCTATCTAAGAGTTCTGGTCTATTGACTGTGCGTCACTGGCTTTGTGATATGGACGATAATATGCTGCATGATGAGGTTCATTCTTTTGGCTTATAGCTTCATTGATGAGGATGACAATGGCATGTCTAGAATAGGTGGGAATGGAAAGAAGACAAGTATCTTACATCTCAAGTTAGAATTTCAGTGAGGTCTCAAGTTTAATGAAAAAGGTCTCAATTTTCAATGTGATACTGCATGACCTCAACCCTTGATGCAAAGGTAGAATTCCTAAAATTTACTATCAATTTCACTTCTAGAACAAGCAACATGGATCTGTGGTGGAAGTCTCATTCTGTGGATTTAGATGTTTTTGAGGTCACAGGTTCAAATTATGGTTACCATCTATCTAGGAAATTAAACAATATATGAATTTCCTAATATCAAATGTGGTAAGGTTAGATAGTTCCCAAGTAGGATTAGTCAAGGAGTGTGAGTTAGTCTAGTCAACTACAGCTATAAAAAGGTTCTCTCAAACAACGAATATTTTGCAAAAATTTTGATTTTGTGGTCAAAATATTGGACATGATAGAATAATATTTATGTTGATCTTGTTTAAAATAATATTTGTGTTGATTACCACTTGCCACAGCTCATAAGGTTTTGGGTTATCGAAACTTATTATCATGGGGATCCCCAAAGAGACTCTTCCCAGTAGGCTAGATTTTGTTGTTTGAAACTTTATATTCATAGGTGGGGAAAGGAATGAGATCGTTGTGGAGTTGCAGACCAGATCATCAAGCAGTACCTTTTGCTTCCGTCTGAACATAGCTGTTTTCATTCACATGTCAATAGTGAAAAGTATCTTTTCCAGTAATGGAATGCCTATTTCAATTATTCTTGTGGGTTTAGAATGGTTCATGTCTAGTTGTTTTATGATTGGTTATGGCTTTTACTTTGTACAATTTGAAGAACCAGTTAAATTAACAGAGTTTGATCTGTTTTCAGGCTTCTAACTCCTCCTGGAACT TTAGAGAGGCTTGCAGTGGGAGAAGCGAATTTGGATGCGGATTCTTCACCTATTGGGTTGTGCTTGGAAGTGTTGTGGCCGGGGAGCTTCACTGCAGATCTAATTGACTTGGGGGATTTAGACATGAATCGTAGCTTTAGGGCTTTGGAATCGCAAATGCAAGCTCCGGTAAAGCAGCGGCAGCAGCAAGTTGGGGGACTGAGGGCGTCGGTGATGAAAGATAAGGAGGAGGAGCTTGCTTTGTTCTTAGAAATGAGAAAGCGTGAGAAAGAGAGGAATGATCTTCTCTCTAACAACGCGGAAGAGTTCGATGCGCCTTTAGGAACAAAACCAGGAACTTCTCCAATATTTAACATCTCATCAGCGACTCCAGCCCCTACACGCAAGACTGGTGCTGATGATTTTCTTAATTCTGACAATGATAAAAATGATTATGATTGGTAA TTAGAGAGGCTTGCAGTGGGAGAAGCGAATTTGGATGCGGATTCTTCACCTATTGGGTTGTGCTTGGAAGTGTTGTGGCCGGGGAGCTTCACTGCAGATCTAATTGACTTGGGGGATTTAGACATGAATCGTAGCTTTAGGGCTTTGGAATCGCAAATGCAAGCTCCGGTAAAGCAGCGGCAGCAGCAAGTTGGGGGACTGAGGGCGTCGGTGATGAAAGATAAGGAGGAGGAGCTTGCTTTGTTCTTAGAAATGAGAAAGCGTGAGAAAGAGAGGAATGATCTTCTCTCTAACAACGCGGAAGAGTTCGATGCGCCTTTAGGAACAAAACCAGGAACTTCTCCAATATTTAACATCTCATCAGCGACTCCAGCCCCTACACGCAAGACTGGTGCTGATGATTTTCTTAATTCTGACAATGATAAAAATGATTATGATTGGTAA LERLAVGEANLDADSSPIGLCLEVLWPGSFTADLIDLGDLDMNRSFRALESQMQAPVKQRQQQVGGLRASVMKDKEEELALFLEMRKREKERNDLLSNNAEEFDAPLGTKPGTSPIFNISSATPAPTRKTGADDFLNSDNDKNDYDW Homology
BLAST of Spg039585 vs. NCBI nr
Match: XP_038885154.1 (endochitinase A [Benincasa hispida]) HSP 1 Score: 208.0 bits (528), Expect = 5.6e-50 Identity = 108/110 (98.18%), Postives = 108/110 (98.18%), Query Frame = 0
BLAST of Spg039585 vs. NCBI nr
Match: XP_023551118.1 (flocculation protein FLO11-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 206.1 bits (523), Expect = 2.1e-49 Identity = 106/111 (95.50%), Postives = 108/111 (97.30%), Query Frame = 0
BLAST of Spg039585 vs. NCBI nr
Match: XP_022939313.1 (flocculation protein FLO11-like [Cucurbita moschata]) HSP 1 Score: 206.1 bits (523), Expect = 2.1e-49 Identity = 106/111 (95.50%), Postives = 108/111 (97.30%), Query Frame = 0
BLAST of Spg039585 vs. NCBI nr
Match: KAG6578448.1 (hypothetical protein SDJN03_22896, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 204.9 bits (520), Expect = 4.7e-49 Identity = 105/111 (94.59%), Postives = 108/111 (97.30%), Query Frame = 0
BLAST of Spg039585 vs. NCBI nr
Match: KAG7016011.1 (hypothetical protein SDJN02_21115 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 204.9 bits (520), Expect = 4.7e-49 Identity = 105/111 (94.59%), Postives = 108/111 (97.30%), Query Frame = 0
BLAST of Spg039585 vs. ExPASy TrEMBL
Match: A0A6J1FLB1 (flocculation protein FLO11-like OS=Cucurbita moschata OX=3662 GN=LOC111445266 PE=4 SV=1) HSP 1 Score: 206.1 bits (523), Expect = 1.0e-49 Identity = 106/111 (95.50%), Postives = 108/111 (97.30%), Query Frame = 0
BLAST of Spg039585 vs. ExPASy TrEMBL
Match: A0A6J1BXA9 (mucin-5AC isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006344 PE=4 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 6.7e-49 Identity = 104/106 (98.11%), Postives = 106/106 (100.00%), Query Frame = 0
BLAST of Spg039585 vs. ExPASy TrEMBL
Match: A0A6J1JXM8 (flocculation protein FLO11-like OS=Cucurbita maxima OX=3661 GN=LOC111489236 PE=4 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 1.5e-48 Identity = 104/111 (93.69%), Postives = 106/111 (95.50%), Query Frame = 0
BLAST of Spg039585 vs. ExPASy TrEMBL
Match: A0A6J1JP82 (zonadhesin OS=Cucurbita maxima OX=3661 GN=LOC111487104 PE=4 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 1.6e-47 Identity = 102/106 (96.23%), Postives = 103/106 (97.17%), Query Frame = 0
BLAST of Spg039585 vs. ExPASy TrEMBL
Match: A0A1S3B3G3 (endochitinase A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485566 PE=4 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 4.8e-47 Identity = 104/106 (98.11%), Postives = 104/106 (98.11%), Query Frame = 0
BLAST of Spg039585 vs. TAIR 10
Match: AT2G40070.1 (BEST Arabidopsis thaliana protein match is: proline-rich family protein (TAIR:AT3G09000.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 117.9 bits (294), Expect = 7.1e-27 Identity = 66/107 (61.68%), Postives = 85/107 (79.44%), Query Frame = 0
BLAST of Spg039585 vs. TAIR 10
Match: AT2G40070.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: proline-rich family protein (TAIR:AT3G09000.1); Has 108635 Blast hits to 60786 proteins in 2176 species: Archae - 287; Bacteria - 15142; Metazoa - 39415; Fungi - 26849; Plants - 4416; Viruses - 2864; Other Eukaryotes - 19662 (source: NCBI BLink). ) HSP 1 Score: 82.0 bits (201), Expect = 4.3e-16 Identity = 42/64 (65.62%), Postives = 52/64 (81.25%), Query Frame = 0
BLAST of Spg039585 vs. TAIR 10
Match: AT3G09000.1 (proline-rich family protein ) HSP 1 Score: 52.4 bits (124), Expect = 3.7e-07 Identity = 35/82 (42.68%), Postives = 49/82 (59.76%), Query Frame = 0
BLAST of Spg039585 vs. TAIR 10
Match: AT2G38160.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40070.2); Has 972 Blast hits to 731 proteins in 211 species: Archae - 0; Bacteria - 236; Metazoa - 194; Fungi - 201; Plants - 218; Viruses - 32; Other Eukaryotes - 91 (source: NCBI BLink). ) HSP 1 Score: 41.2 bits (95), Expect = 8.4e-04 Identity = 28/78 (35.90%), Postives = 43/78 (55.13%), Query Frame = 0
BLAST of Spg039585 vs. TAIR 10
Match: AT2G38160.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40070.2). ) HSP 1 Score: 41.2 bits (95), Expect = 8.4e-04 Identity = 28/78 (35.90%), Postives = 43/78 (55.13%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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