Spg039333 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg039333
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	psbP-like protein 1, chloroplastic
Location	scaffold10: 42420120 .. 42425868 (+)
RNA-Seq Expression	Spg039333
Synteny	Spg039333

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAATTGTAATTTAGCGAACTTTTGTTTATTCGACACGAAATTAGAAAATTAGTTTTCTCAAATTCTTTTGGAAGAGAAAAGGCAGAAAAACGGGTGAGGGGCCGACGCAAGAAATGTGGCTGAGCAAACCCGCGAACACAACGGATAGGAAATCCAAGAACAGAACCAAAAGATAAGGCCATCTCACATCAACGAAGCACACGCTACACAAGCAAAGGACCTTCAATGGCTTCTCTGAATTGCTCTCCCTCTCTCCAAAAGCCTCTCTTCGTCAATTCTCTTCCCCAGGTTCACAGTTCATTTCGAAATCATTTCAATTTTGGTCGTTTCTGTTTGCTCTCAGGCTTTTGGATTCTGATTAACGATCAGCAATGTTTCTTCGCTCACAGAATCTCCATGGAAGATTTGTTTGCTGCAGAGCAGGGATTTCACTTCTCGTCAGGGCCGAGCAAGCACACGGATCTTCCTTTAATGGCCATGCCTGCAGTTCTGAAGGTCAGTTTGAGTAATCTGAGATGGAATATCAGAGTCTTGTGAATTAGAGTATTGATTATGCTTCCATTTAGCTTAATATTTCGAGTTGATTCAGTGTGCATGCCAGTTGGAGACTGTGTTCAGTATCGAGATGATTTGGCTCAAGCAAATTGAGAGTGTAGAAGGTTTTATAACTTTTAATCATCTGTTAGAAAATAGGACTCACCGCCACCCCCATACTTATAGATTGATGTAAAGTGGAAGGATATAAAGTGAGAAATGTACTGTGCAAATCTTCTTAAAAGCATAAGTTCGCCTAGCTTGTAGGTACTATGGTAATGCCTGAGATACGACATCCCTTACAAGATTAATGCCCTATAGTAATTTTGTTGCGTGAACCAAGGGGTTGAATATCAATATCCTCCTCTCTGCTGACCCAACTCATTAAGTGAACTGGCCATAGCAAACTAATGTCAGACTAGTTTGAATTATTGTTTTAGAAGGGATACTAGTTCAACTCATGTAAGAATAAGTTAATTGGGTAGCGTCAAAGCACACAGACCTCAACTCCAAGAATGTGGAAGCAAATGAGGGAACTCGTTCTAGAGATTTTAATCCCATGTTCCCATTTTGCCGAGGATGAAAATCGTTACATGGGTGGAAAAGCATTTTGCTTCAAGGAAAATTACCTGAGGGCGAAGTCTCGACTGTGATGGCCAATTATGGATTTTCTTCTTTGCTAGCTTGCCATGTACTGTCTCCTCAGACTTTAATACTTATATCGCTTAAATGGCATTTTCTGGCTTGTATAATGTTATCACAATTCAGGCATTTTTTATACTGCTTTTATATTTCTCCCCATGGATGATCTCATTGCATTCTTATCAGCTCTAGAAACTAATTAAAGAATTTCATTTTTCAACAGTTGCTCTGTTTTTTGGCAGATAGACTTGGGAGGCGCCAGCTGCTGGCTGGCAGTGCCTTTATTACTTGGATTTCTCTTGCAGACATGAATTCCATGTCATGTAAGATTTATCACTCCTATTACTTACTGATATTTTACATTGCTCTTTCATTTTTGTTGCTTCTCTTCAAGAAGTTTAATTCTGAAATTAGCCCCTCTAGTGTGCACTGTATTTCTTTCTTCCAAAATGAAGGATGATGATATCCTAAGAGTACCCGCTTGATATTGCTCAGTTGCTGCAGAAACAAAGAAAGGGTTTCTATCAGTTTCTGACAAGAAAGACGGTTACTCGTTTGTCTATCCATTTGGGTGGCAGGTACACTAATTGTTCACTTTTATGTTTGCTCCACTCCATTGCCTTTGCACACACAATCCACTTTAAATTTAACTACTTGGCATAAGATGCACGCTTCAAAGTATTTTTTCACTCGAGGAGTGAGCAGGAGGTAGTCATTGATGGTCAAGACAAGGTATTCAAAGATGTAATTGAACCATTAGAAAGTGTCAGTGTAAATATGATTCCTACCAGCAAAGAAGATATTCGAGATTTTGGGTCCCCTCAACAGGTTAGCAATAAAATGTTTGAATGTTGCAATAAGTTGGTAATTTTAATTTTTAGGTAACTTCAGTGTCTTATGGTTCAGGTTGCAGAAACTTTGATAAAGAAGGTTTTAGCTCCTTCTAATCAAAAAACGAAGTTAATTGAAGCATCAGAGGTTTGACTATCTATACTGTTGTCTGAGATTTTATCATTTTCTGGAGTGAAATAAATAGTTGCTGTAAATTAACTTACCCAATAAATCTGATGCACAAGCATCACCGAACACTATAGTGGAAGGTTCTTTAGAATATTCTTCCACAAATTTTCTTGACATCATTGTAAATCCATCTTCTAAAATTAAAAATACACCCAAAAGTAAAACCAATTCACTTATGTAATTGTGAAGTGGATGACTTATTTAGTCAATCAGTTCACCACATCATAACTTAGGGTTTTGGAATGAGAAGGATTGGAGAAGTGTGTTGGGATTGATGAGCAGGAGTTGAAGGATTCGTATTTCTCTCAATGGAGAGAGGGAGAGATGAAGGAGATGTAGTGTAAGAATTAGGGCAAAGGAGAGAAAGGAATTTGATTTGATTAGTTTGAGAAAGTGGAATTGGGACTGTGATTGTGACTTTTTCTCTGTGAGAGAGATGAGAGATGTTTTGAAGAGAAAATAAAATAGACGAAATTAAATTAACAAGAAAAAGAAAAAAAAAATGAGCGCATCAAGTAGGGGTCGAGAACCTACAACTTTTTGCTTAGCAAACGGACACGCTCTATCCACTGAGCTACAAGCGCTTACTTTTATACATTGACCGTCTAAAATTAAAAATGCACTCAAAAGTAAAACCAATTCACTAATGTAATCTGTGAAGTGAATGACTTATTTAGTCAATCAGTTCACCACATCATAGGTTAGGATTTTGGAATGAGAGGGGTCGGAGAATAATGGGTTGGGATTGATGAGCAGGAGTTGAAGGATTCGCATTTCCCTCAATGGGGAGAGGGAGAGATGATGGAGATGTAGTGTAAGAATTAGGGCAAAGCAGATAAAGGAATTTGATTTGATTAGTTTGAGAAAGTGGAATTGGGAATCTGACTGACTTTTTTTCTGTGAGAGAGATGTGTAATCTGTGAAGTGAATGACTTATTTAGTCAATCAATTCACCACATCATAGCTTAGGATTTTGGAATGAGAGGGATTGGAGAATAATGGGTTGGGATTGATGAGCAGGAGTTGAAGGATTCGCATTTCCCTCAATGGAGAGATGAAGGAGGTGTACTGTAAGAATTAGGGCAAAGCAGAGAAAGGAAATTGATTTGATTGGTTTAAGAAAGTGGAATTGGGACTGTGACTGACTTTTTCTTTGTGAGACAGATGTGAGATGTTTTGAAGAGAAAATAAAATAGACGCAATTAAATTATTATTAACAACAAAAAGAAAGAATTGAGCGCACCAGGTAGGGGTCGAACCTACGACTTTCTGCTTAGGAAACAGACGCTCTATCCACTGAGCTACAAGCGCTTACTTCTGTTCAAAATTTTTCTAAAATTAAAAATACACCCAAAAGTAAAATCAATTCACTTATGTAATCTGTGAAGTGAATGACTTATTTAGTTCATTAGTACATGAGAGACGAGAGATGTTTAGAAAAGAAAATAAAATAGAAGATAAAAAGAAAGACATAAACGCGCCAGGTAGGGGTTAAACCTACGACTTTCTGCTTAGGAAACAGACGCTATATCCACTGAGCTACAAGTGCTTACTTTTGTTCACAATTCTTCTAAAATTAAAAATACGCCCAAAAGTAAATCAATTCACTTATGTAATCTGTAAAGTGAATGACTTAGTCCATTAGTACATGAGAGATGTTTTGAAAAGAAAATAAAATATAAAATAAAAAGGAAGACATAAAACGCACCAGGTAGGGGTCGAACCTACGACTTTCTGCTTAGGAAACAGACGCTCTATCCACTGAGCTACAAGCGCTTACTTTTGTTGTTGAAACACAGAATTATTAATTTAATGAATTATTACCTAATTACAAGTTTAAAATGTGTCTCACAAATTTAAAATTGTCTAAATTGTCTAATATGTCTCTGAACTTTACATTTTATGCTTAGTAGTTGTCTAGTAGGTTCCCATCAACTTTTGATTTTTTTGCTTGATAAGCCCTTACCATATTTGACATTTTTTCTTTGAAGGTTCGTGAATATTAGAAAATGTCAAATATGATAGATTTATTAGACATTTTTTTATAAAGTTTAGAAATATATTAGACACAACAATTTTTTAATGTTAAATTTTTTGTCTAGTAGGTTCCCATAAACTTTTGGTTTTTTTGTTTAATAAGCCTTTATCATATTTGACATTTTTTCTTTGAAGGTTCGTGAATGTTAGAAAATGTCAAATATAATAGATTTATTAGACACTTTTTATAAAGTTTAGAAATATATTAGACACAACATTTAAAGTTCAAGAACTAAGCTTATAATTTAACTCAAATAAAAATTATGATTAAATTTCATTTTAATTCCTGAACTGTCAACTATTCAAAAAAAAACCTAAACTTTCAACACTGTTCTATTTTGGTCTATGAACTCTCCTAAGTTTGTTTTATTTCGGGCTCCTAACTTTTAAAATGATGAAAAAAGGCTTATTTTACTTTTGGGTGTAAAATTGAAAATACACCAAAAGTAAAACCAATTCACATTTGAGTTTTTCTTACAAATACTGATGATAGAACCAAACTCCAATGAGGTTGGTCGTCACTTCTTCTCGCCCAGCAACCAGCATACTTTCATTTTGTCGTACAAGATGTGCTCTGAATATAATAGCACGTTACTTCAAAATAGCTCTCCTTGTAAAGTTCGACATGATAGACAGAGATAACGACCAATGAGTTTTTTTTTTTTTTTTCTTTTAATCAGACCAAGAAGTTAATATTAACTTATTTTGTTGTTCAATCTATGTGAGCAAGCGTCCTAAGTTGTTTTGGTTTATAGCTTTTGGAGGAGGTCAAATTTGTCTAACTTGTCAAGTTTACTTGCTCTACAATTTTTGTAGCTTTATTCCAAATTGTGAATGACAAGCATCTGATTTACCCAAAAACAAATGATGTTTTCACCTCTATGCCTATGTGCTTATTGGTCTGTTTTGAATGAATGATGCAGCATGACGTTGATGGAAAAGCATACTACACATTTGAATTTGTAGCTCAAGCTCCAAACTACACTCGCCATGCTCTTAGCACGATTGCTGTTGCCAATGGTATGGAACTTCACTAGTCTAATTTCACTTTTCTTGTGTAATTTTTGTCCAAGTGATTCTTGTTAATCTATTCGTGTATTTTGAGGGAGAAAAATAACCTGATTTCTAAAAATAATTCCCTGACAAGCCCCTAGATTCCCAACGAAGCTCTCTTTACATCTTTAATGCCAATTATATCCTTCATTCTTCAATGGCAGGAAAATTCTACACTTTGACAACCGGAGCAAATGAGAGGAGGTGGGAGAAAATGAAAGATAAATTGCGCACAGTTGTTGATTCCTTCACAATTTCAAACGTTTGATGGGGTTCCCCTGTGAACACATTTATCATTGTTCGAACGCCATTTTGATTCTTTCAGGTTGCTTAGAATTGAACTTTAGTAACTTATTCACACCTTTTGTCCTTTAATTCTTTAGATCGAGGAGTGAACTTAGAGGGATTGTAACGCCCTGTATTGTCGGATGGATATGTTAAAGAATGCTATAACACCAA

mRNA sequence

ATGGAAGATTTGTTTGCTGCAGAGCAGGGATTTCACTTCTCGTCAGGGCCGAGCAAGCACACGGATCTTCCTTTAATGGCCATGCCTGCAGTTCTGAAGTGTGCATGCCAGTTGGAGACTGTGTTCAGTATCGAGATGATTTGGCTCAAGCAAATTGAGAGTGTAGAAGATAGACTTGGGAGGCGCCAGCTGCTGGCTGGCAGTGCCTTTATTACTTGGATTTCTCTTGCAGACATGAATTCCATGTCATTTGCTGCAGAAACAAAGAAAGGGTTTCTATCAGTTTCTGACAAGAAAGACGGTTACTCGTTTGTCTATCCATTTGGGTGGCAGGAGGTAGTCATTGATGGTCAAGACAAGGTATTCAAAGATGTAATTGAACCATTAGAAAGTGTCAGTGTAAATATGATTCCTACCAGCAAAGAAGATATTCGAGATTTTGGGTCCCCTCAACAGGTTGCAGAAACTTTGATAAAGAAGGTTTTAGCTCCTTCTAATCAAAAAACGAAGTTAATTGAAGCATCAGAGCATGACGTTGATGGAAAAGCATACTACACATTTGAATTTGTAGCTCAAGCTCCAAACTACACTCGCCATGCTCTTAGCACGATTGCTGTTGCCAATGGAAAATTCTACACTTTGACAACCGGAGCAAATGAGAGGAGGTGGGAGAAAATGAAAGATAAATTGCGCACAGTTGTTGATTCCTTCACAATTTCAAACGTTTGA

Coding sequence (CDS)

ATGGAAGATTTGTTTGCTGCAGAGCAGGGATTTCACTTCTCGTCAGGGCCGAGCAAGCACACGGATCTTCCTTTAATGGCCATGCCTGCAGTTCTGAAGTGTGCATGCCAGTTGGAGACTGTGTTCAGTATCGAGATGATTTGGCTCAAGCAAATTGAGAGTGTAGAAGATAGACTTGGGAGGCGCCAGCTGCTGGCTGGCAGTGCCTTTATTACTTGGATTTCTCTTGCAGACATGAATTCCATGTCATTTGCTGCAGAAACAAAGAAAGGGTTTCTATCAGTTTCTGACAAGAAAGACGGTTACTCGTTTGTCTATCCATTTGGGTGGCAGGAGGTAGTCATTGATGGTCAAGACAAGGTATTCAAAGATGTAATTGAACCATTAGAAAGTGTCAGTGTAAATATGATTCCTACCAGCAAAGAAGATATTCGAGATTTTGGGTCCCCTCAACAGGTTGCAGAAACTTTGATAAAGAAGGTTTTAGCTCCTTCTAATCAAAAAACGAAGTTAATTGAAGCATCAGAGCATGACGTTGATGGAAAAGCATACTACACATTTGAATTTGTAGCTCAAGCTCCAAACTACACTCGCCATGCTCTTAGCACGATTGCTGTTGCCAATGGAAAATTCTACACTTTGACAACCGGAGCAAATGAGAGGAGGTGGGAGAAAATGAAAGATAAATTGCGCACAGTTGTTGATTCCTTCACAATTTCAAACGTTTGA

Protein sequence

MEDLFAAEQGFHFSSGPSKHTDLPLMAMPAVLKCACQLETVFSIEMIWLKQIESVEDRLGRRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDKVFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQKTKLIEASEHDVDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTISNV

Homology

[Close]

BLAST of Spg039333 vs. NCBI nr
Match: KAG7033025.1 (PsbP-like protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 395.6 bits (1015), Expect = 3.1e-106
Identity = 203/242 (83.88%), Postives = 213/242 (88.02%), Query Frame = 0


Query: 1   MEDLFAAEQGFHFSSGPSKHTDLPLMAMPAVLKCACQLETVFSIEMIWLKQIESVEDRLG 60
           +EDLFAAE+GF F SGPSKHTDLP+M   AV K  C L                  DRLG
Sbjct: 54  VEDLFAAERGFRFLSGPSKHTDLPVMVKLAVPKSLCFL-----------------ADRLG 113

Query: 61  RRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDK 120
           RRQLLAGS+FITWISLADMNSMSFAAE+KKGFLSV+DK DGYSF+YPFGWQEVVIDGQDK
Sbjct: 114 RRQLLAGSSFITWISLADMNSMSFAAESKKGFLSVTDKTDGYSFLYPFGWQEVVIDGQDK 173

Query: 121 VFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQKTKLIEASEHDVD 180
           VFKDVIEPLESVSVN+IPTSKEDIRDFG PQQVAETLIKKVLAPSNQKTKLIEASEH+VD
Sbjct: 174 VFKDVIEPLESVSVNLIPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIEASEHEVD 233

Query: 181 GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTIS 240
           GKAYYTFEFVAQAPNYTRHALSTIAV+NGKFYTLTTGANERRWEKMKDKLRTVVDSFTIS
Sbjct: 234 GKAYYTFEFVAQAPNYTRHALSTIAVSNGKFYTLTTGANERRWEKMKDKLRTVVDSFTIS 278

Query: 241 NV 243
           NV
Sbjct: 294 NV 278

[Close]

BLAST of Spg039333 vs. NCBI nr
Match: XP_038890216.1 (psbP-like protein 1, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 368.6 bits (945), Expect = 4.1e-98
Identity = 185/189 (97.88%), Postives = 187/189 (98.94%), Query Frame = 0


Query: 54  SVEDRLGRRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEV 113
           S EDRLGRRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEV
Sbjct: 54  SSEDRLGRRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEV 113

Query: 114 VIDGQDKVFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQKTKLIE 173
           VIDGQDKVFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQ+TKLIE
Sbjct: 114 VIDGQDKVFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQRTKLIE 173

Query: 174 ASEHDVDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTV 233
           ASEHDV+GKAYYTFEFVAQAPNYTRHALSTI VANGKFYTLTTGANERRWEKMKDKLRTV
Sbjct: 174 ASEHDVNGKAYYTFEFVAQAPNYTRHALSTIVVANGKFYTLTTGANERRWEKMKDKLRTV 233

Query: 234 VDSFTISNV 243
           VDSFTISNV
Sbjct: 234 VDSFTISNV 242

[Close]

BLAST of Spg039333 vs. NCBI nr
Match: KAG7016254.1 (PsbP-like protein 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 365.5 bits (937), Expect = 3.4e-97
Identity = 182/189 (96.30%), Postives = 186/189 (98.41%), Query Frame = 0


Query: 54  SVEDRLGRRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEV 113
           S EDRLGRRQLLAGSAFITWI LADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEV
Sbjct: 54  SSEDRLGRRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEV 113

Query: 114 VIDGQDKVFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQKTKLIE 173
           VIDGQDKVFKDVIEPLE+VSVNMIPTSKEDIRDFGSPQQ+AETLIKKVLAPSNQ+TKLIE
Sbjct: 114 VIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKVLAPSNQRTKLIE 173

Query: 174 ASEHDVDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTV 233
           ASEHD+DGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTV
Sbjct: 174 ASEHDIDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTV 233

Query: 234 VDSFTISNV 243
           VDSFTIS V
Sbjct: 234 VDSFTISKV 242

[Close]

BLAST of Spg039333 vs. NCBI nr
Match: XP_023551143.1 (psbP-like protein 1, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 365.5 bits (937), Expect = 3.4e-97
Identity = 182/189 (96.30%), Postives = 186/189 (98.41%), Query Frame = 0


Query: 54  SVEDRLGRRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEV 113
           S EDRLGRRQLLAGSAFITWI LADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEV
Sbjct: 54  SSEDRLGRRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEV 113

Query: 114 VIDGQDKVFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQKTKLIE 173
           VIDGQDKVFKDVIEPLE+VSVNMIPTSKEDIRDFGSPQQ+AETLIKKVLAPSNQ+TKLIE
Sbjct: 114 VIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKVLAPSNQRTKLIE 173

Query: 174 ASEHDVDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTV 233
           ASEHD+DGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTV
Sbjct: 174 ASEHDIDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTV 233

Query: 234 VDSFTISNV 243
           VDSFTIS V
Sbjct: 234 VDSFTISKV 242

[Close]

BLAST of Spg039333 vs. NCBI nr
Match: XP_004149814.1 (psbP-like protein 1, chloroplastic [Cucumis sativus] >KGN51262.1 hypothetical protein Csa_008747 [Cucumis sativus])

HSP 1 Score: 364.0 bits (933), Expect = 1.0e-96
Identity = 182/189 (96.30%), Postives = 187/189 (98.94%), Query Frame = 0


Query: 54  SVEDRLGRRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEV 113
           S EDRLGRRQLL+GSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEV
Sbjct: 48  SSEDRLGRRQLLSGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEV 107

Query: 114 VIDGQDKVFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQKTKLIE 173
           VIDGQDKVFKDVIEPLE+VSVN+IPTSKEDIRDFG PQQVAETLIKKVLAPSNQKTKLIE
Sbjct: 108 VIDGQDKVFKDVIEPLENVSVNLIPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIE 167

Query: 174 ASEHDVDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTV 233
           ASEHDV+GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTV
Sbjct: 168 ASEHDVNGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTV 227

Query: 234 VDSFTISNV 243
           VDSFTIS+V
Sbjct: 228 VDSFTISSV 236

[Close]

BLAST of Spg039333 vs. ExPASy Swiss-Prot
Match: P82538 (PsbP-like protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPL1 PE=1 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 6.1e-73
Identity = 132/186 (70.97%), Postives = 154/186 (82.80%), Query Frame = 0


Query: 55  VEDRLGRRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVV 114
           ++D+  RR ++       WISL     +SFAAE+KKGFL+VSD KD Y+F+YPFGWQEVV
Sbjct: 44  LQDKCQRRLIVTFGVVAPWISLLSRAPLSFAAESKKGFLAVSDNKDAYAFLYPFGWQEVV 103

Query: 115 IDGQDKVFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQKTKLIEA 174
           I+GQDKV+KDVIEPLESVSVN++PTSK+ I++FG P+Q+AETLIKKVLAP NQKT LI+A
Sbjct: 104 IEGQDKVYKDVIEPLESVSVNLVPTSKQTIKEFGPPKQIAETLIKKVLAPPNQKTTLIDA 163

Query: 175 SEHDVDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVV 234
           SEHDVDGK YY FEF  QA NYTRHAL TI V NG FYTLTTGANERRWEKMKD+L TVV
Sbjct: 164 SEHDVDGKTYYQFEFTVQARNYTRHALGTITVFNGNFYTLTTGANERRWEKMKDRLHTVV 223

Query: 235 DSFTIS 241
           DSF I+
Sbjct: 224 DSFKIT 229

[Close]

BLAST of Spg039333 vs. ExPASy Swiss-Prot
Match: O80634 (Photosynthetic NDH subunit of lumenal location 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSL1 PE=1 SV=2)

HSP 1 Score: 133.7 bits (335), Expect = 2.9e-30
Identity = 70/182 (38.46%), Postives = 99/182 (54.40%), Query Frame = 0


Query: 61  RRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDK 120
           RRQ L G    T ++ +   ++  A E  K +    D++DGYS+ YP  W+E      D 
Sbjct: 59  RRQALVGVG--TLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDS 118

Query: 121 VFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQKTKLIEASEHDVD 180
            FKD    L++V V  IPT K DI + G  ++V   L+K   A  NQ   + +  E   D
Sbjct: 119 AFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKERVED 178

Query: 181 GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTIS 240
           GK YYTFE+  + P Y   + +T+AV N ++YTL  GANERRW K+K +L+ V DS  I 
Sbjct: 179 GKNYYTFEYGLRTPIYATTSFATVAVGNNRYYTLIVGANERRWRKVKKQLQVVADSLKIL 238

Query: 241 NV 243
            +
Sbjct: 239 QI 238

[Close]

BLAST of Spg039333 vs. ExPASy Swiss-Prot
Match: Q40407 (Oxygen-evolving enhancer protein 2, chloroplastic OS=Narcissus pseudonarcissus OX=39639 GN=PSBP PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.8e-09
Identity = 57/208 (27.40%), Postives = 93/208 (44.71%), Query Frame = 0


Query: 58  RLGRRQLLAGSAFITWISLADMNSMSFA-----AETKKGFLSVSDKKDGYSFVYPFGW-- 117
           RL    L+ G+A  + +S AD      A      +T   F +V+   DG+  + P  W  
Sbjct: 58  RLALTILIGGAALGSRVSAADAAYGESANVFGKPKTNTDFQTVTG--DGFKILIPSKWNP 117

Query: 118 -QEVVIDGQDKVFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQ--------------VAE 177
            +EV   GQ   ++D  +   +V V + PT K+ I+D+GSP+Q                +
Sbjct: 118 SKEVEFPGQVLRYEDNFDTTSNVGVMVNPTDKKSIKDYGSPEQFLSQVDYLLGKQAYFGK 177

Query: 178 TLIKKVLAPSNQKT-KLIEASEHDVDGKAYYTFEFV---AQAPNYTRHALSTIAVANGKF 237
           T+ +    P+  +T  ++E S   V GK YY+   +   A      +H L T  V++GK 
Sbjct: 178 TISEGGFEPNAVRTANILETSTPVVGGKDYYSIHVLTRTADGDEGGKHLLITATVSDGKL 237

Query: 238 YTLTTGANERRWEK-MKDKLRTVVDSFT 239
           Y     A ++RW K  K  + +   SF+
Sbjct: 238 YICKAQAGDKRWFKGAKKFVESAASSFS 263

[Close]

BLAST of Spg039333 vs. ExPASy Swiss-Prot
Match: O49080 (Oxygen-evolving enhancer protein 2, chloroplastic OS=Fritillaria agrestis OX=64177 GN=PSBP PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 6.9e-08
Identity = 49/177 (27.68%), Postives = 81/177 (45.76%), Query Frame = 0


Query: 86  AETKKGFLSVSDKKDGYSFVYPFGW---QEVVIDGQDKVFKDVIEPLESVSVNMIPTSKE 145
           A+T   FL  +   DG++ + P  W   +EV   GQ   ++D  +   +VSV + PTSK+
Sbjct: 90  AKTNTDFLPYTG--DGFNLLIPAKWNPSKEVEFPGQVLRYEDNFDVTSNVSVTVTPTSKK 149

Query: 146 DIRDFGSPQQVAET----LIKKVLA----------PSNQKT-KLIEASEHDVDGKAYYTF 205
            I D+G+P++   T    L K+  +          P +  T  ++E S   V GK YY  
Sbjct: 150 SITDYGTPEEFLSTVDYLLGKQAYSGKTASEGGFDPDSVATANILEVSTPVVGGKQYYNI 209

Query: 206 EFV---AQAPNYTRHALSTIAVANGKFYTLTTGANERRWEK-MKDKLRTVVDSFTIS 241
             +   A      +H + +  V +GK Y     A ++RW K  K  + +   SF ++
Sbjct: 210 SVLTRTADGDEGGKHHVISATVTDGKLYICKAQAGDKRWFKGAKKFVESTTTSFNVA 264

[Close]

BLAST of Spg039333 vs. ExPASy Swiss-Prot
Match: P18212 (Oxygen-evolving enhancer protein 2-2, chloroplastic OS=Nicotiana tabacum OX=4097 GN=PSBP2 PE=1 SV=2)

HSP 1 Score: 56.6 bits (135), Expect = 4.5e-07
Identity = 45/163 (27.61%), Postives = 70/163 (42.94%), Query Frame = 0


Query: 100 DGYSFVYPFGW---QEVVIDGQDKVFKDVIEPLESVSVNMIPTSKEDIRDFGSPQ----Q 159
           DG+    P  W   +EV   GQ   F+D  +   +V V + PT K+ I DFGSP+    Q
Sbjct: 103 DGFKLQIPSKWNPNKEVEYPGQVLRFEDNFDATSNVIVAITPTDKKSITDFGSPEQFLSQ 162

Query: 160 VAETLIKKVLAPSNQK-----------TKLIEASEHDVDGKAYYTFEFVAQAPNYT---R 219
           V   L ++  +                  ++E S  +V GK YY    + +  +     +
Sbjct: 163 VDYLLGRQAYSGKTDSEGGFESDAVAIANVLETSSAEVGGKPYYYLSVLTRTADGNEGGK 222

Query: 220 HALSTIAVANGKFYTLTTGANERRWEK-MKDKLRTVVDSFTIS 241
           H L T  V +GK Y     A ++RW K  K  +     SF+++
Sbjct: 223 HQLITATVNDGKLYICKAQAGDKRWFKGAKKFVENTATSFSLA 265

[Close]

BLAST of Spg039333 vs. ExPASy TrEMBL
Match: A0A0A0KS54 (PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G505230 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 4.8e-97
Identity = 182/189 (96.30%), Postives = 187/189 (98.94%), Query Frame = 0


Query: 54  SVEDRLGRRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEV 113
           S EDRLGRRQLL+GSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEV
Sbjct: 48  SSEDRLGRRQLLSGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEV 107

Query: 114 VIDGQDKVFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQKTKLIE 173
           VIDGQDKVFKDVIEPLE+VSVN+IPTSKEDIRDFG PQQVAETLIKKVLAPSNQKTKLIE
Sbjct: 108 VIDGQDKVFKDVIEPLENVSVNLIPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIE 167

Query: 174 ASEHDVDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTV 233
           ASEHDV+GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTV
Sbjct: 168 ASEHDVNGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTV 227

Query: 234 VDSFTISNV 243
           VDSFTIS+V
Sbjct: 228 VDSFTISSV 236

[Close]

BLAST of Spg039333 vs. ExPASy TrEMBL
Match: A0A6J1FN44 (psbP-like protein 1, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445433 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 4.8e-97
Identity = 181/189 (95.77%), Postives = 185/189 (97.88%), Query Frame = 0


Query: 54  SVEDRLGRRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEV 113
           S EDRLGRRQLLAGSAFITWI LADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEV
Sbjct: 54  SSEDRLGRRQLLAGSAFITWIYLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEV 113

Query: 114 VIDGQDKVFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQKTKLIE 173
           VIDGQDKVFKDVIEPLE+VSVNMIPTSKEDIRDFGSPQQ+AETLIKKVLAPSNQ+TKLIE
Sbjct: 114 VIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKVLAPSNQRTKLIE 173

Query: 174 ASEHDVDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTV 233
           ASEHD+DGKAYYTFEFVAQAPNYTRHALSTI VANGKFYTLTTGANERRWEKMKDKLRTV
Sbjct: 174 ASEHDIDGKAYYTFEFVAQAPNYTRHALSTIVVANGKFYTLTTGANERRWEKMKDKLRTV 233

Query: 234 VDSFTISNV 243
           VDSFTIS V
Sbjct: 234 VDSFTISKV 242

[Close]

BLAST of Spg039333 vs. ExPASy TrEMBL
Match: A0A5D3C3H9 (PsbP-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002630 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 6.3e-97
Identity = 182/189 (96.30%), Postives = 187/189 (98.94%), Query Frame = 0


Query: 54  SVEDRLGRRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEV 113
           S EDRLGRRQLL+GSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEV
Sbjct: 48  SSEDRLGRRQLLSGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEV 107

Query: 114 VIDGQDKVFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQKTKLIE 173
           VIDGQDKVFKDVIEPLESVSVN+IPTSKEDIRDFG PQQVAETLIKKVLAPSNQKTKLIE
Sbjct: 108 VIDGQDKVFKDVIEPLESVSVNLIPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIE 167

Query: 174 ASEHDVDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTV 233
           ASEHDV+GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTV
Sbjct: 168 ASEHDVNGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTV 227

Query: 234 VDSFTISNV 243
           V+SFTIS+V
Sbjct: 228 VESFTISSV 236

[Close]

BLAST of Spg039333 vs. ExPASy TrEMBL
Match: A0A1S3CJG4 (psbP-like protein 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501654 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 6.3e-97
Identity = 182/189 (96.30%), Postives = 187/189 (98.94%), Query Frame = 0


Query: 54  SVEDRLGRRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEV 113
           S EDRLGRRQLL+GSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEV
Sbjct: 48  SSEDRLGRRQLLSGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEV 107

Query: 114 VIDGQDKVFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQKTKLIE 173
           VIDGQDKVFKDVIEPLESVSVN+IPTSKEDIRDFG PQQVAETLIKKVLAPSNQKTKLIE
Sbjct: 108 VIDGQDKVFKDVIEPLESVSVNLIPTSKEDIRDFGPPQQVAETLIKKVLAPSNQKTKLIE 167

Query: 174 ASEHDVDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTV 233
           ASEHDV+GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTV
Sbjct: 168 ASEHDVNGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTV 227

Query: 234 VDSFTISNV 243
           V+SFTIS+V
Sbjct: 228 VESFTISSV 236

[Close]

BLAST of Spg039333 vs. ExPASy TrEMBL
Match: A0A6J1JSB4 (psbP-like protein 1, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489333 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 8.3e-97
Identity = 181/189 (95.77%), Postives = 185/189 (97.88%), Query Frame = 0


Query: 54  SVEDRLGRRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEV 113
           S EDRLGRRQLLAGSAFITWI LADMN MSFAAETKKGFLSVSDKKDGYSFVYPFGWQEV
Sbjct: 54  SSEDRLGRRQLLAGSAFITWIYLADMNFMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEV 113

Query: 114 VIDGQDKVFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQKTKLIE 173
           VIDGQDKVFKDVIEPLE+VSVNMIPTSKEDIRDFGSPQQ+AETLIKKVLAPSNQ+TKLIE
Sbjct: 114 VIDGQDKVFKDVIEPLENVSVNMIPTSKEDIRDFGSPQQIAETLIKKVLAPSNQRTKLIE 173

Query: 174 ASEHDVDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTV 233
           ASEHD+DGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTV
Sbjct: 174 ASEHDIDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTV 233

Query: 234 VDSFTISNV 243
           VDSFTIS V
Sbjct: 234 VDSFTISKV 242

[Close]

BLAST of Spg039333 vs. TAIR 10
Match: AT3G55330.1 (PsbP-like protein 1 )

HSP 1 Score: 275.4 bits (703), Expect = 4.4e-74
Identity = 132/186 (70.97%), Postives = 154/186 (82.80%), Query Frame = 0


Query: 55  VEDRLGRRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVV 114
           ++D+  RR ++       WISL     +SFAAE+KKGFL+VSD KD Y+F+YPFGWQEVV
Sbjct: 44  LQDKCQRRLIVTFGVVAPWISLLSRAPLSFAAESKKGFLAVSDNKDAYAFLYPFGWQEVV 103

Query: 115 IDGQDKVFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQKTKLIEA 174
           I+GQDKV+KDVIEPLESVSVN++PTSK+ I++FG P+Q+AETLIKKVLAP NQKT LI+A
Sbjct: 104 IEGQDKVYKDVIEPLESVSVNLVPTSKQTIKEFGPPKQIAETLIKKVLAPPNQKTTLIDA 163

Query: 175 SEHDVDGKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVV 234
           SEHDVDGK YY FEF  QA NYTRHAL TI V NG FYTLTTGANERRWEKMKD+L TVV
Sbjct: 164 SEHDVDGKTYYQFEFTVQARNYTRHALGTITVFNGNFYTLTTGANERRWEKMKDRLHTVV 223

Query: 235 DSFTIS 241
           DSF I+
Sbjct: 224 DSFKIT 229

[Close]

BLAST of Spg039333 vs. TAIR 10
Match: AT2G39470.1 (PsbP-like protein 2 )

HSP 1 Score: 133.7 bits (335), Expect = 2.1e-31
Identity = 70/182 (38.46%), Postives = 99/182 (54.40%), Query Frame = 0


Query: 61  RRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDK 120
           RRQ L G    T ++ +   ++  A E  K +    D++DGYS+ YP  W+E      D 
Sbjct: 59  RRQALVGVG--TLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDS 118

Query: 121 VFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQKTKLIEASEHDVD 180
            FKD    L++V V  IPT K DI + G  ++V   L+K   A  NQ   + +  E   D
Sbjct: 119 AFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKERVED 178

Query: 181 GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTIS 240
           GK YYTFE+  + P Y   + +T+AV N ++YTL  GANERRW K+K +L+ V DS  I 
Sbjct: 179 GKNYYTFEYGLRTPIYATTSFATVAVGNNRYYTLIVGANERRWRKVKKQLQVVADSLKIL 238

Query: 241 NV 243
            +
Sbjct: 239 QI 238

[Close]

BLAST of Spg039333 vs. TAIR 10
Match: AT2G39470.2 (PsbP-like protein 2 )

HSP 1 Score: 133.7 bits (335), Expect = 2.1e-31
Identity = 70/182 (38.46%), Postives = 99/182 (54.40%), Query Frame = 0


Query: 61  RRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDK 120
           RRQ L G    T ++ +   ++  A E  K +    D++DGYS+ YP  W+E      D 
Sbjct: 51  RRQALVGVG--TLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDS 110

Query: 121 VFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQKTKLIEASEHDVD 180
            FKD    L++V V  IPT K DI + G  ++V   L+K   A  NQ   + +  E   D
Sbjct: 111 AFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKERVED 170

Query: 181 GKAYYTFEFVAQAPNYTRHALSTIAVANGKFYTLTTGANERRWEKMKDKLRTVVDSFTIS 240
           GK YYTFE+  + P Y   + +T+AV N ++YTL  GANERRW K+K +L+ V DS  I 
Sbjct: 171 GKNYYTFEYGLRTPIYATTSFATVAVGNNRYYTLIVGANERRWRKVKKQLQVVADSLKIL 230

Query: 241 NV 243
            +
Sbjct: 231 QI 230

[Close]

BLAST of Spg039333 vs. TAIR 10
Match: AT2G39470.3 (PsbP-like protein 2 )

HSP 1 Score: 68.9 bits (167), Expect = 6.2e-12
Identity = 39/116 (33.62%), Postives = 57/116 (49.14%), Query Frame = 0


Query: 61  RRQLLAGSAFITWISLADMNSMSFAAETKKGFLSVSDKKDGYSFVYPFGWQEVVIDGQDK 120
           RRQ L G    T ++ +   ++  A E  K +    D++DGYS+ YP  W+E      D 
Sbjct: 51  RRQALVGVG--TLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDS 110

Query: 121 VFKDVIEPLESVSVNMIPTSKEDIRDFGSPQQVAETLIKKVLAPSNQKTKLIEASE 177
            FKD    L++V V  IPT K DI + G  ++V   L+K   A  NQ   + +  E
Sbjct: 111 AFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKE 164

[Close]

BLAST of Spg039333 vs. TAIR 10
Match: AT1G06680.1 (photosystem II subunit P-1 )

HSP 1 Score: 55.8 bits (133), Expect = 5.4e-08
Identity = 44/163 (26.99%), Postives = 70/163 (42.94%), Query Frame = 0


Query: 100 DGYSFVYPFGW---QEVVIDGQDKVFKDVIEPLESVSVNMIPTSKEDIRDFGSPQ----Q 159
           DG+    P  W   +E+   GQ   F+D  +   +++V + PT K+ I D+GSP+    Q
Sbjct: 101 DGFKVQVPAKWNPSKEIEYPGQVLRFEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQ 160

Query: 160 VAETLIKKVLAPSNQK-----------TKLIEASEHDVDGKAYYTFEFV---AQAPNYTR 219
           V   L K+                     ++E+S  +V GK YY    +   A      +
Sbjct: 161 VNYLLGKQAYFGETASEGGFDNNAVATANILESSSQEVGGKPYYYLSVLTRTADGDEGGK 220

Query: 220 HALSTIAVANGKFYTLTTGANERRWEKMKDK-LRTVVDSFTIS 241
           H L T  V  GK Y     A ++RW K   K + +   SF+++
Sbjct: 221 HQLITATVNGGKLYICKAQAGDKRWFKGARKFVESAATSFSVA 263

The following BLAST results are available for this feature:

BLAST of Spg039333 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033025.1	3.1e-106	83.88	PsbP-like protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyr...	[more]
XP_038890216.1	4.1e-98	97.88	psbP-like protein 1, chloroplastic isoform X2 [Benincasa hispida]	[more]
KAG7016254.1	3.4e-97	96.30	PsbP-like protein 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023551143.1	3.4e-97	96.30	psbP-like protein 1, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_004149814.1	1.0e-96	96.30	psbP-like protein 1, chloroplastic [Cucumis sativus] >KGN51262.1 hypothetical pr...	[more]

BLAST of Spg039333 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P82538	6.1e-73	70.97	PsbP-like protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPL1 PE=1 ...	[more]
O80634	2.9e-30	38.46	Photosynthetic NDH subunit of lumenal location 1, chloroplastic OS=Arabidopsis t...	[more]
Q40407	4.8e-09	27.40	Oxygen-evolving enhancer protein 2, chloroplastic OS=Narcissus pseudonarcissus O...	[more]
O49080	6.9e-08	27.68	Oxygen-evolving enhancer protein 2, chloroplastic OS=Fritillaria agrestis OX=641...	[more]
P18212	4.5e-07	27.61	Oxygen-evolving enhancer protein 2-2, chloroplastic OS=Nicotiana tabacum OX=4097...	[more]

BLAST of Spg039333 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KS54	4.8e-97	96.30	PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G505230 PE=4 S...	[more]
A0A6J1FN44	4.8e-97	95.77	psbP-like protein 1, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A5D3C3H9	6.3e-97	96.30	PsbP-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G0...	[more]
A0A1S3CJG4	6.3e-97	96.30	psbP-like protein 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501654 PE=4 ...	[more]
A0A6J1JSB4	8.3e-97	95.77	psbP-like protein 1, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

BLAST of Spg039333 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55330.1	4.4e-74	70.97	PsbP-like protein 1	[more]
AT2G39470.1	2.1e-31	38.46	PsbP-like protein 2	[more]
AT2G39470.2	2.1e-31	38.46	PsbP-like protein 2	[more]
AT2G39470.3	6.2e-12	33.62	PsbP-like protein 2	[more]
AT1G06680.1	5.4e-08	26.99	photosystem II subunit P-1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002683	PsbP, C-terminal	PFAM	PF01789	PsbP	coord: 91..239 e-value: 4.8E-51 score: 173.0
None	No IPR available	GENE3D	3.40.1000.10	Mog1/PsbP, alpha/beta/alpha sandwich	coord: 79..240 e-value: 1.0E-50 score: 174.1
None	No IPR available	PANTHER	PTHR31407	FAMILY NOT NAMED	coord: 51..240
None	No IPR available	PANTHER	PTHR31407:SF4	PSBP-LIKE PROTEIN 1, CHLOROPLASTIC	coord: 51..240
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	SUPERFAMILY	55724	Mog1p/PsbP-like	coord: 95..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg039333.1	Spg039333.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009654	photosystem II oxygen evolving complex
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0005509	calcium ion binding