Spg039271 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg039271
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	RING-CH-type domain-containing protein
Location	scaffold10: 46072880 .. 46076410 (+)
RNA-Seq Expression	Spg039271
Synteny	Spg039271

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCATTATACAAGTAGAATGGTAGATTTTGTTGGTACAGTAATTTGGTAGGCATTGGGCATCCAAGTTTTGGTGTGGTTGGGAAAAGGAAAGGCTCCATGAATTTTTCTCTCTTTTGTACACAATATGTGATGTAATTTTTGTCTCTTAAGATTTCTCTTTTCCCTCGAACAATGATTTGGATGATCACGTTTTCTACTTTTTCTTTTGAGTGAAAAAAAATTTGTAAAGAAAAGGGAAAAAGAAGAAGCTCAATGATACTCTGCATAATGCAGTGCAAAAATTGTCTCCCAAATCTCTCCTCGTCTTTTTCCTCTCTGCAACTCTGTTTTCAGCCTGCACATCGCCACTGACACCCAACAAAGCCGCTGAAAGAGGGGACACCCACCACACTTACTTCTTCTTCTCACTCGATTACTGATTATCGTTCCAAAATCAGACCCTAAATCAAATCATATTTGTTGATGGGAGTCCTTTCTCTCTGTGGGTATTCATGGTTTTGGCCTCACAGAGCCATTACATGAGGATTCTCTCTCTGGGTCTTTGCAATGACGACAATCGAAAACTCCCACGTTGTTGCAATGGAGGAAGAGCAAGAAGAACGGCCTCGCCGGCTTTCTACAGCCGCCACTGACGCCTCTCCGGCTTCTGATGATGTGCGGCGGTGCTCGGGCCAGTCGAGGGCTGAGATTGTGGGGGAGGCGGCGCCGGTGCCGGAGAAAAGAAGGGGATCCTCTGTCTCGGAGTGCTCTGTGGAGATGGATCTGGAATGTGGGTTGGCTGAGATTAAGGTACATTTGGCGAAAATCGAGAGGGATTGCCGGATTTGCCATCTGAGTTTGGATGCTTCTAATCACGAATCTGGAATCCCCATTGAACTGGGTTGTTCTTGTAAGGAAGATTTGGCTGCTGCTCATAAGCAGTGTGCTGAGGCTTGGTTCAGGATTAAGGGCGACATGTAAGTTTCCCTAATTTTTCTTGCTTTCAAGTTTCATTTCTCAACTACTAAGTTTAGTTCATTTATTGTGTTTAATTACGTTCCAATTACTGCGAATCATATTCCATGCATTGGATATAAGAACCTTGTTTTCATGATTTGAACTTGTGGTTCAAATTTCCCTATTCCTATTGGCGTCTTAGCTTTCATTTTTGTGTTATTTTTTCTTGTTTCTGACTACTCTTGAAGTTTGTTTTCTTACTTAAAAGTTGTGGTTGGCTGCTTTTGCTCTTGGTATCTTAGTGATGTAAAAGAATTTGGCTTGTAATTGTCTTTGATCGTGTCAAAATAGCCTGCTTTTGACTAAAATTGACTGATTCCTGGTCTTCTGTCTGCATAACACATTTATCTGAATGTTAAAAATTTGAGATTATGCGGTAATCTGGATTTTTGCTTCTGCCTAAATCCATTAGCCTTTTTTAAGGATCCGTGTTGTTATTTCCTGTTAAAGAACAAAGCCAAAATGAAATGTGCTTCTTTGTCAAAACGAAGAGAAGTTGGCTTTTGCATCGGACCATCTGGGACCGAGATGACGTTTAATCGATGAGACTGCAGCTCTTGGCCTCGTTTCTTGAAGAAGAACTTTGCCTTCAAATGCTCATTTCTTAGCCTAAAAGTATTTTTGCTTGTTTTAGTCTGATGTACTATTGATTAGAGCCCATTTCTTAGCTGAGTTCAAATGTTTGAATATTCTTCTTCAACATGTTTTGTTCTTTTTGTTTGTGGTCAACTGTAGTGTGAAGTTGGAACCAAAGGAGAAAATATTCATTACTTTTAATTTGCAATATTTTCTTCATTACTACAATGTATGATGTTGGTATCTACAAAAGTACACGGAATCAACATTTATTCCAAAAAAGGCCAATCAGTGAGATTCTTTCCTTTTTAACCATTCTTTTATCATACTATATTAAAGAAGACAGTTACAGAGATTGGTACAAATATTATGATGCCATATAGAATAGTTTTGTTTTGAGTTTCAATTTCAAATAGTTTTCTTTCAGGTTTTACTGATATTCTCCATAAATTCTACGATCGGCATATCTATCGATACGAATTTCTATCTTTTGTTCAAAATGTATTAAACTTATATGGGACAAAGTTAGAGCTTCAGTTTGAGGTTGATTGTAATTTCATTTCACCTCTCTCAAATCATCATCCAAGAATATGAAGCTAGTTTTGCTCCCGAGTAATTCACGATAACGAACATGCATCTCCTGTAGAACCTGGGAAACACATTTAAGTTTATAGATAGAGATACTATATTTGAACAAAATTATTTCCTCATTCCTTGTTCTGCAACCTGGATTAGTATCAGCTAATCTAAAATCTCTTTTTGTTTTCATCTTTGTGGTGAAGCTGATTGATGGAAGTATTTTCATGATCACTATCTTCATGATGTCTTGTGCATAAGTTGGAAATATTTTTCTGGTATCTAATCGAACCATGAAAAATCTATCAGCATATTAGAAGAATTTTGTTAATATAATTCAATATGTTAACCAAATATAGTAGGGCAGTTATCTCGTGAGAATAGTCAAGGTGCACACAAGCTAGCCTGTACACCCACAAATATAAAAAATATATATATATATATATATATAAAAGTCGGATCTGTTAAAAACTTTATTGCTTTTGACCTTGTTATGAAAAATTTTCATTATTGGAGAGTGATCTGTATCTAGAAAACTTGCTTGTTATTCATATTGTTCTTCTAGCTATGACTGTATAGAGTTTGGAGTAATTTGAAAGTTGCATTTTCTGAAAAGCAGATTCAGTTCAAACAGGGAAAGACTTTTTTTTTTTTTTTTTGAAAAGAACAGGGAAAGACTTAATATGTACCTTATGTCTCTACTTGCACTGACCAATCTGCAATTTGTTATAGCACCTGTGAAATCTGTGGATCAATTGCACACAATGTTACTGGTACTTATGAAGCCGATTTGACAGAGCAGCGCAATGAGTCAAGCGATGCAGCGACAGCAACCGCTGCAGCCACCGTCGTGGTGCCACCACACTCTACAGAGGCTCGGAACTTCTGGCAGGGCCACAGGTTCCTGAATTTCTTACTCGCCTGCATGGTTTTCGCCTTTGTCATATCATGGCTATTTCACTTCAAAATACCCTCATGATGAAAACTGCACCCGGAAGTAGCATCAAAAGATTGTCGAAAGCTTCGTCTCTCTTCATTCTGCAATCGACCACACCGTGTCGTTACCGACTCGGGGGGTTTGTGATTCGTATACGGATATTCTGTTAATATATGTTAGTGTTAGAGAACCAGATGTAATGTAACTTTGTATTGTATTATTGGGGCTTTGTGATGTTACAGCGTATTGAAAACAGACAGGTTGGATTGTTGGGCGATGAATTTCACAATCAGTTGATGTTCGAAAAGATGCTGTAACGATTCAGCTAGCTGGATTGGCCATTTTCGATTGTTTATGTTGTTTGTCTCTTGTCGTCTCGTTATGGATAATTCTCTGTGGAGATTCCGACATGTCGTTCCTTCTTAAACAACAAAATCGGATTTGGG

mRNA sequence

ATGACGACAATCGAAAACTCCCACGTTGTTGCAATGGAGGAAGAGCAAGAAGAACGGCCTCGCCGGCTTTCTACAGCCGCCACTGACGCCTCTCCGGCTTCTGATGATGTGCGGCGGTGCTCGGGCCAGTCGAGGGCTGAGATTGTGGGGGAGGCGGCGCCGGTGCCGGAGAAAAGAAGGGGATCCTCTGTCTCGGAGTGCTCTGTGGAGATGGATCTGGAATGTGGGTTGGCTGAGATTAAGGTACATTTGGCGAAAATCGAGAGGGATTGCCGGATTTGCCATCTGAGTTTGGATGCTTCTAATCACGAATCTGGAATCCCCATTGAACTGGGTTGTTCTTGTAAGGAAGATTTGGCTGCTGCTCATAAGCAGTGTGCTGAGGCTTGGTTCAGGATTAAGGGCGACATCACCTGTGAAATCTGTGGATCAATTGCACACAATGTTACTGGTACTTATGAAGCCGATTTGACAGAGCAGCGCAATGAGTCAAGCGATGCAGCGACAGCAACCGCTGCAGCCACCGTCGTGGTGCCACCACACTCTACAGAGGCTCGGAACTTCTGGCAGGGCCACAGGTTCCTGAATTTCTTACTCGCCTGCATGGTTTTCGCCTTTGTCATATCATGGCTATTTCACTTCAAAATACCCTCATGA

Coding sequence (CDS)

ATGACGACAATCGAAAACTCCCACGTTGTTGCAATGGAGGAAGAGCAAGAAGAACGGCCTCGCCGGCTTTCTACAGCCGCCACTGACGCCTCTCCGGCTTCTGATGATGTGCGGCGGTGCTCGGGCCAGTCGAGGGCTGAGATTGTGGGGGAGGCGGCGCCGGTGCCGGAGAAAAGAAGGGGATCCTCTGTCTCGGAGTGCTCTGTGGAGATGGATCTGGAATGTGGGTTGGCTGAGATTAAGGTACATTTGGCGAAAATCGAGAGGGATTGCCGGATTTGCCATCTGAGTTTGGATGCTTCTAATCACGAATCTGGAATCCCCATTGAACTGGGTTGTTCTTGTAAGGAAGATTTGGCTGCTGCTCATAAGCAGTGTGCTGAGGCTTGGTTCAGGATTAAGGGCGACATCACCTGTGAAATCTGTGGATCAATTGCACACAATGTTACTGGTACTTATGAAGCCGATTTGACAGAGCAGCGCAATGAGTCAAGCGATGCAGCGACAGCAACCGCTGCAGCCACCGTCGTGGTGCCACCACACTCTACAGAGGCTCGGAACTTCTGGCAGGGCCACAGGTTCCTGAATTTCTTACTCGCCTGCATGGTTTTCGCCTTTGTCATATCATGGCTATTTCACTTCAAAATACCCTCATGA

Protein sequence

MTTIENSHVVAMEEEQEERPRRLSTAATDASPASDDVRRCSGQSRAEIVGEAAPVPEKRRGSSVSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKEDLAAAHKQCAEAWFRIKGDITCEICGSIAHNVTGTYEADLTEQRNESSDAATATAAATVVVPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS

Homology

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BLAST of Spg039271 vs. NCBI nr
Match: KAG6602635.1 (hypothetical protein SDJN03_07868, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 377.9 bits (969), Expect = 6.0e-101
Identity = 189/218 (86.70%), Postives = 200/218 (91.74%), Query Frame = 0


Query: 1   MTTIENSHVVAMEEEQEERPRRLSTAATDASPASDDVRRCSGQSRAEIVGEAAPVPEKRR 60
           M+TIE++HVVAMEEE+EERP R+STA T ASPASDDVRRCS QS AEIVG AA V EKRR
Sbjct: 1   MSTIEDTHVVAMEEEKEERPSRVSTAGTAASPASDDVRRCSVQSSAEIVGAAAAV-EKRR 60

Query: 61  GSSVSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKEDLA 120
           GSSVSECSVEMDLECGL EIKVHLAK+ERDCRICHLSLDA+NHESGIPIELGCSCK+DLA
Sbjct: 61  GSSVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLA 120

Query: 121 AAHKQCAEAWFRIKGDITCEICGSIAHNVTGTYEADLTEQRNESSDAATATAAATVVVPP 180
           AAHK CAEAWF++KGDITCEICGSIAHNVTGT EAD TEQ NES+D  TAT  A VVVPP
Sbjct: 121 AAHKHCAEAWFKVKGDITCEICGSIAHNVTGTCEADSTEQCNESNDGTTATTVAAVVVPP 180

Query: 181 HSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 219
           HSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 HSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 217

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BLAST of Spg039271 vs. NCBI nr
Match: XP_022990745.1 (uncharacterized protein LOC111487535 [Cucurbita maxima])

HSP 1 Score: 377.5 bits (968), Expect = 7.9e-101
Identity = 188/218 (86.24%), Postives = 198/218 (90.83%), Query Frame = 0


Query: 1   MTTIENSHVVAMEEEQEERPRRLSTAATDASPASDDVRRCSGQSRAEIVGEAAPVPEKRR 60
           M+TI+N+HVVAMEEEQEERP R+STA TDASPASDDVRRCS QS AEIVG A    EKRR
Sbjct: 1   MSTIQNTHVVAMEEEQEERPSRVSTAGTDASPASDDVRRCSVQSSAEIVGAAV---EKRR 60

Query: 61  GSSVSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKEDLA 120
           GSSVSECSVEMDLECGL EIKVHLAK+ERDCRICHLSLDA+NHESGIPIELGCSCK+DLA
Sbjct: 61  GSSVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLA 120

Query: 121 AAHKQCAEAWFRIKGDITCEICGSIAHNVTGTYEADLTEQRNESSDAATATAAATVVVPP 180
           AAHK CAEAWF++KGDITCEICGSIAHNVT T EAD TEQ NES+D  TAT AA VVVPP
Sbjct: 121 AAHKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDGTTATTAAAVVVPP 180

Query: 181 HSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 219
           HSTE RNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 HSTETRNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 215

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BLAST of Spg039271 vs. NCBI nr
Match: XP_022957596.1 (uncharacterized protein LOC111458938 [Cucurbita moschata])

HSP 1 Score: 374.8 bits (961), Expect = 5.1e-100
Identity = 188/218 (86.24%), Postives = 199/218 (91.28%), Query Frame = 0


Query: 1   MTTIENSHVVAMEEEQEERPRRLSTAATDASPASDDVRRCSGQSRAEIVGEAAPVPEKRR 60
           M+TIE++HVVAMEEE+EERP R+STA T ASPASDDVRRCS QS AEIVG AA   EKRR
Sbjct: 1   MSTIEDTHVVAMEEEKEERPSRVSTAGTAASPASDDVRRCSVQSSAEIVGAAA--VEKRR 60

Query: 61  GSSVSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKEDLA 120
           GSSVSECSVEMDLECGL EIKVHLAK+ERDCRICHLSLDA+NHESGIPIELGCSCK+DLA
Sbjct: 61  GSSVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLA 120

Query: 121 AAHKQCAEAWFRIKGDITCEICGSIAHNVTGTYEADLTEQRNESSDAATATAAATVVVPP 180
           AAHK CAEAWF++KGDITCEICGSIAHNVT T EAD TEQ NES+D  TAT AA VVVPP
Sbjct: 121 AAHKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDGTTATTAAAVVVPP 180

Query: 181 HSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 219
           HSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 HSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 216

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BLAST of Spg039271 vs. NCBI nr
Match: XP_023524419.1 (uncharacterized protein LOC111788319 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 373.6 bits (958), Expect = 1.1e-99
Identity = 187/218 (85.78%), Postives = 198/218 (90.83%), Query Frame = 0


Query: 1   MTTIENSHVVAMEEEQEERPRRLSTAATDASPASDDVRRCSGQSRAEIVGEAAPVPEKRR 60
           M+TI+N+HVVAMEEEQEERP R+STA T ASPASDDVRRCS QS AEIVG AA V EKRR
Sbjct: 19  MSTIQNTHVVAMEEEQEERPSRVSTAGTAASPASDDVRRCSVQSSAEIVG-AAAVVEKRR 78

Query: 61  GSSVSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKEDLA 120
           GSSVSECSVEMDLECGL EIKVHLAK+ERDCRICHLSLDA+NHESGIPIELGCSCK+DLA
Sbjct: 79  GSSVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLA 138

Query: 121 AAHKQCAEAWFRIKGDITCEICGSIAHNVTGTYEADLTEQRNESSDAATATAAATVVVPP 180
           AAHK CAEAWF++KGDITCEICGSIAHNVT T EAD TEQ NES+D  TAT AA V+VPP
Sbjct: 139 AAHKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDGTTATTAAAVMVPP 198

Query: 181 HSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 219
           H  EARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 199 HPMEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 235

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BLAST of Spg039271 vs. NCBI nr
Match: XP_038884403.1 (uncharacterized protein LOC120075258 [Benincasa hispida])

HSP 1 Score: 367.9 bits (943), Expect = 6.2e-98
Identity = 186/223 (83.41%), Postives = 201/223 (90.13%), Query Frame = 0


Query: 1   MTTIENSHVVAM-----EEEQEERPRRLSTAATDASPASDDVRRCSGQSRAEIVGEAAPV 60
           MTTI+NSHV  M     +++Q++RPRR+S AATD+SPASDDVRRCS QSRA+I+ E A  
Sbjct: 1   MTTIQNSHVGTMDVEQQQQQQQQRPRRVSAAATDSSPASDDVRRCSVQSRADIMEEVA-- 60

Query: 61  PEKRRGSSVSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSC 120
            EKRRGSSVSECSVEMDLECGLAEIKVHLAKIERD RICHLSLDASNHESGIPIELGCSC
Sbjct: 61  AEKRRGSSVSECSVEMDLECGLAEIKVHLAKIERDFRICHLSLDASNHESGIPIELGCSC 120

Query: 121 KEDLAAAHKQCAEAWFRIKGDITCEICGSIAHNVTGTYEADLTEQRNESSDAATATAAAT 180
           K+DLAAAHKQCAEAWF+IKGDITCEICGSIAHNVTGTYE D TEQRNES++A TAT  A 
Sbjct: 121 KDDLAAAHKQCAEAWFKIKGDITCEICGSIAHNVTGTYEPDSTEQRNESNEATTATTTAA 180

Query: 181 VVVPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 219
           VV+P HSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 VVMPLHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 221

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BLAST of Spg039271 vs. ExPASy TrEMBL
Match: A0A6J1JQX9 (uncharacterized protein LOC111487535 OS=Cucurbita maxima OX=3661 GN=LOC111487535 PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 3.8e-101
Identity = 188/218 (86.24%), Postives = 198/218 (90.83%), Query Frame = 0


Query: 1   MTTIENSHVVAMEEEQEERPRRLSTAATDASPASDDVRRCSGQSRAEIVGEAAPVPEKRR 60
           M+TI+N+HVVAMEEEQEERP R+STA TDASPASDDVRRCS QS AEIVG A    EKRR
Sbjct: 1   MSTIQNTHVVAMEEEQEERPSRVSTAGTDASPASDDVRRCSVQSSAEIVGAAV---EKRR 60

Query: 61  GSSVSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKEDLA 120
           GSSVSECSVEMDLECGL EIKVHLAK+ERDCRICHLSLDA+NHESGIPIELGCSCK+DLA
Sbjct: 61  GSSVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLA 120

Query: 121 AAHKQCAEAWFRIKGDITCEICGSIAHNVTGTYEADLTEQRNESSDAATATAAATVVVPP 180
           AAHK CAEAWF++KGDITCEICGSIAHNVT T EAD TEQ NES+D  TAT AA VVVPP
Sbjct: 121 AAHKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDGTTATTAAAVVVPP 180

Query: 181 HSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 219
           HSTE RNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 HSTETRNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 215

[Close]

BLAST of Spg039271 vs. ExPASy TrEMBL
Match: A0A6J1GZN3 (uncharacterized protein LOC111458938 OS=Cucurbita moschata OX=3662 GN=LOC111458938 PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 2.5e-100
Identity = 188/218 (86.24%), Postives = 199/218 (91.28%), Query Frame = 0


Query: 1   MTTIENSHVVAMEEEQEERPRRLSTAATDASPASDDVRRCSGQSRAEIVGEAAPVPEKRR 60
           M+TIE++HVVAMEEE+EERP R+STA T ASPASDDVRRCS QS AEIVG AA   EKRR
Sbjct: 1   MSTIEDTHVVAMEEEKEERPSRVSTAGTAASPASDDVRRCSVQSSAEIVGAAA--VEKRR 60

Query: 61  GSSVSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKEDLA 120
           GSSVSECSVEMDLECGL EIKVHLAK+ERDCRICHLSLDA+NHESGIPIELGCSCK+DLA
Sbjct: 61  GSSVSECSVEMDLECGLGEIKVHLAKMERDCRICHLSLDATNHESGIPIELGCSCKDDLA 120

Query: 121 AAHKQCAEAWFRIKGDITCEICGSIAHNVTGTYEADLTEQRNESSDAATATAAATVVVPP 180
           AAHK CAEAWF++KGDITCEICGSIAHNVT T EAD TEQ NES+D  TAT AA VVVPP
Sbjct: 121 AAHKHCAEAWFKVKGDITCEICGSIAHNVTSTCEADSTEQCNESNDGTTATTAAAVVVPP 180

Query: 181 HSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 219
           HSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 HSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 216

[Close]

BLAST of Spg039271 vs. ExPASy TrEMBL
Match: A0A6J1FEB0 (uncharacterized protein LOC111444740 OS=Cucurbita moschata OX=3662 GN=LOC111444740 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 2.0e-97
Identity = 184/218 (84.40%), Postives = 195/218 (89.45%), Query Frame = 0


Query: 1   MTTIENSHVVAMEEEQEERPRRLSTAATDASPASDDVRRCSGQSRAEIVGEAAPVPEKRR 60
           MTT +NSHVVAME  + E+PRR S A  DA  AS+DVR+CSGQSRAEIVG AA   EKRR
Sbjct: 1   MTTTQNSHVVAMEVGEVEQPRRTSAAGADALLASNDVRQCSGQSRAEIVGAAA---EKRR 60

Query: 61  GSSVSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKEDLA 120
            SSVSECSVEMDLECGLAEIK+HL K+ERDCRICHLSLDASN ESGIPIELGCSCK+DLA
Sbjct: 61  ESSVSECSVEMDLECGLAEIKLHLTKMERDCRICHLSLDASNQESGIPIELGCSCKDDLA 120

Query: 121 AAHKQCAEAWFRIKGDITCEICGSIAHNVTGTYEADLTEQRNESSDAATATAAATVVVPP 180
           AAHK CAEAWF+IKGDITCEICGSIAHNVT TYE D TEQRN+S+DA TATAAA VVVPP
Sbjct: 121 AAHKHCAEAWFKIKGDITCEICGSIAHNVTATYEPDSTEQRNDSNDATTATAAAAVVVPP 180

Query: 181 HSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 219
           HSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 HSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 215

[Close]

BLAST of Spg039271 vs. ExPASy TrEMBL
Match: A0A6J1JXH7 (uncharacterized protein LOC111489196 OS=Cucurbita maxima OX=3661 GN=LOC111489196 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 5.9e-94
Identity = 179/218 (82.11%), Postives = 189/218 (86.70%), Query Frame = 0


Query: 1   MTTIENSHVVAMEEEQEERPRRLSTAATDASPASDDVRRCSGQSRAEIVGEAAPVPEKRR 60
           MTT +NSHVVAME  + E+P R S A  DA  ASDDVR+CSGQSRAEIVG AA   EKRR
Sbjct: 1   MTTTQNSHVVAMEVGEVEQPSRTSAAGADALLASDDVRQCSGQSRAEIVGAAA---EKRR 60

Query: 61  GSSVSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKEDLA 120
            SS SECSVEMDLECGL+EIKVHL K+ RDCRICHLSLDASN ESGIPIELGCSCK+DLA
Sbjct: 61  ESSASECSVEMDLECGLSEIKVHLTKMGRDCRICHLSLDASNQESGIPIELGCSCKDDLA 120

Query: 121 AAHKQCAEAWFRIKGDITCEICGSIAHNVTGTYEADLTEQRNESSDAATATAAATVVVPP 180
           AAHK CAEAWF+IKGDITCEICGSIAHNVT TYE D TEQRN+S+D  TAT AA VVVPP
Sbjct: 121 AAHKHCAEAWFKIKGDITCEICGSIAHNVTVTYEPDSTEQRNDSNDETTATTAAAVVVPP 180

Query: 181 HSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 219
           HS EARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 HSIEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 215

[Close]

BLAST of Spg039271 vs. ExPASy TrEMBL
Match: A0A0A0K8G0 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G009420 PE=4 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.5e-92
Identity = 180/225 (80.00%), Postives = 194/225 (86.22%), Query Frame = 0


Query: 1   MTTIENSHVVAMEEEQ-EERPRRLSTAATDASPASDDVRRCSGQSRAEIVGE------AA 60
           MTT++ SHVVAM+ EQ ++RPR      TD    SDDVRRCS  SRA+I+ E      AA
Sbjct: 1   MTTVQASHVVAMDVEQHQQRPR------TD----SDDVRRCSVHSRADILEEDGVAVAAA 60

Query: 61  PVPEKRRGSSVSECSVEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGC 120
              EKRRGSSVSECSVEMDLECGLAEIKVHLAKIE+DCRICHLSLDASNHESGIPIELGC
Sbjct: 61  AAVEKRRGSSVSECSVEMDLECGLAEIKVHLAKIEKDCRICHLSLDASNHESGIPIELGC 120

Query: 121 SCKEDLAAAHKQCAEAWFRIKGDITCEICGSIAHNVTGTYEADLTEQRNESSDAATATAA 180
           SCK+DLAAAHK CAEAWF+IKGDITCEICGSIAHNVTGTYEAD TEQRNE ++A TATA 
Sbjct: 121 SCKDDLAAAHKHCAEAWFKIKGDITCEICGSIAHNVTGTYEADSTEQRNEPNEATTATAT 180

Query: 181 ATVVVPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 219
           A +V+PPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS
Sbjct: 181 AAIVMPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKIPS 215

[Close]

BLAST of Spg039271 vs. TAIR 10
Match: AT5G05830.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 216.1 bits (549), Expect = 2.8e-56
Identity = 116/210 (55.24%), Postives = 140/210 (66.67%), Query Frame = 0


Query: 12  MEEEQEERPRRLSTAATDASPASD---DVRRCSGQSRAEIVGEAAPVPEKRRGSSVSECS 71
           ME  Q      +S    ++S   D   + RR SG     +  E   V ++ R S+ S CS
Sbjct: 1   MESVQPHLETFVSVKVINSSSGCDGDGEPRRSSG----AVEKEEEIVKDEERRSNASVCS 60

Query: 72  VEMDLECGLAEIKVHLAKIERDCRICHLSLDASNHESGIPIELGCSCKEDLAAAHKQCAE 131
           VE+DLE GL E  VHL++ ERDCRICH+SLDA+N ESG+PIELGCSCK DLAAAHK CAE
Sbjct: 61  VEIDLELGLPEKVVHLSQSERDCRICHMSLDAANLESGVPIELGCSCKADLAAAHKHCAE 120

Query: 132 AWFRIKGDITCEICGSIAHNVTGTYEADLTEQRNESSDAATATAAATVVVPPHSTEARNF 191
            WF+IKG+  CE+CGSIA NV G+ E +  E RNE++     T   +    P   E R+F
Sbjct: 121 TWFKIKGNKICEVCGSIAGNVVGSVEVESEESRNEANGVENLTLRTS---GPRLVEGRSF 180

Query: 192 WQGHRFLNFLLACMVFAFVISWLFHFKIPS 219
           WQGHRFLNFLLACMVFAFVISWLFHF +PS
Sbjct: 181 WQGHRFLNFLLACMVFAFVISWLFHFNVPS 203

[Close]

BLAST of Spg039271 vs. TAIR 10
Match: AT5G01070.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 138.3 bits (347), Expect = 7.5e-33
Identity = 66/131 (50.38%), Postives = 86/131 (65.65%), Query Frame = 0


Query: 88  ERDCRICHLSLDASNHESGIPIELGCSCKEDLAAAHKQCAEAWFRIKGDITCEICGSIAH 147
           E+DCRICHL L++S HE G P+ LGCSCK+DL   HKQCA+ WF+IKG+ TCEIC SIA 
Sbjct: 75  EKDCRICHLGLESSRHECGDPMVLGCSCKDDLGYVHKQCADTWFKIKGNKTCEICRSIAQ 134

Query: 148 NVTGTYEADLTEQRNESSDAATATAAATVVVPPHSTEARNFWQGHRFLNFLLACMVFAFV 207
           N     + ++ +   E++           +V    ++ R   +G+RFLNFLL CMV AFV
Sbjct: 135 NFF-KVDNEIGQTTVETNVDDVEAGNTPTMVATSDSDDRRLCRGNRFLNFLLTCMVCAFV 194

Query: 208 ISWLFHFKIPS 219
           ISW FHF +PS
Sbjct: 195 ISWFFHFNLPS 204

[Close]

BLAST of Spg039271 vs. TAIR 10
Match: AT2G37950.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 134.8 bits (338), Expect = 8.3e-32
Identity = 72/136 (52.94%), Postives = 84/136 (61.76%), Query Frame = 0


Query: 88  ERDCRICHLSLDASNHESGIPIELGCSCKEDLAAAHKQCAEAWFRIKGDITCEICGSIAH 147
           E+DCRICHL ++ S    G  IELGCSCK+DLA AH+QCAE WF+IKGD TCEIC S+A 
Sbjct: 81  EKDCRICHLGVETS---GGGAIELGCSCKDDLAVAHRQCAETWFKIKGDKTCEICQSVAR 140

Query: 148 NVTGTYE-----ADLTEQRNESSDAATATAAATVVVPPHSTEARNFWQGHRFLNFLLACM 207
           NV G  E      +  E RN    AA     ATVV         N WQ  R +N +LACM
Sbjct: 141 NVGGANEMVGSTMEERELRNGEETAAGEGGGATVV--------ENRWQPQRVVNLVLACM 200

Query: 208 VFAFVISWLFHFKIPS 219
           VF F ISW+FHF + S
Sbjct: 201 VFGFFISWIFHFHVSS 205

[Close]

BLAST of Spg039271 vs. TAIR 10
Match: AT5G59000.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 127.9 bits (320), Expect = 1.0e-29
Identity = 70/159 (44.03%), Postives = 86/159 (54.09%), Query Frame = 0


Query: 89  RDCRICHLSLDASNHES-------------------------------GIPIELGCSCKE 148
           RDCRICHL L+ +                                   G+P++LGCSCK 
Sbjct: 79  RDCRICHLPLETNKEAEDEDEEEEDDSDDDEDEEDEEEEEEEEEEEYYGLPLQLGCSCKG 138

Query: 149 DLAAAHKQCAEAWFRIKGDITCEICGSIAHNVTGTYEADLTEQRNESSDAATATAAATVV 208
           DL  AH +CAE WF+IKG++TCEICG++A NV G       EQ N  S A+T + AA   
Sbjct: 139 DLGVAHSKCAETWFKIKGNMTCEICGAMALNVAG-------EQSNPESTASTHSQAA-AG 198

Query: 209 VPPHSTEARNFWQGHRFLNFLLACMVFAFVISWLFHFKI 217
                TE R  W G   +NFLLA MVFAFV+SWLFHFK+
Sbjct: 199 QSLTQTEPRGIWHGRPVMNFLLAAMVFAFVVSWLFHFKV 229

[Close]

BLAST of Spg039271 vs. TAIR 10
Match: AT5G01070.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 82.0 bits (201), Expect = 6.4e-16
Identity = 32/49 (65.31%), Postives = 40/49 (81.63%), Query Frame = 0


Query: 88  ERDCRICHLSLDASNHESGIPIELGCSCKEDLAAAHKQCAEAWFRIKGD 137
           E+DCRICHL L++S HE G P+ LGCSCK+DL   HKQCA+ WF+IKG+
Sbjct: 75  EKDCRICHLGLESSRHECGDPMVLGCSCKDDLGYVHKQCADTWFKIKGN 123

The following BLAST results are available for this feature:

BLAST of Spg039271 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6602635.1	6.0e-101	86.70	hypothetical protein SDJN03_07868, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022990745.1	7.9e-101	86.24	uncharacterized protein LOC111487535 [Cucurbita maxima]	[more]
XP_022957596.1	5.1e-100	86.24	uncharacterized protein LOC111458938 [Cucurbita moschata]	[more]
XP_023524419.1	1.1e-99	85.78	uncharacterized protein LOC111788319 [Cucurbita pepo subsp. pepo]	[more]
XP_038884403.1	6.2e-98	83.41	uncharacterized protein LOC120075258 [Benincasa hispida]	[more]

BLAST of Spg039271 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg039271 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JQX9	3.8e-101	86.24	uncharacterized protein LOC111487535 OS=Cucurbita maxima OX=3661 GN=LOC111487535...	[more]
A0A6J1GZN3	2.5e-100	86.24	uncharacterized protein LOC111458938 OS=Cucurbita moschata OX=3662 GN=LOC1114589...	[more]
A0A6J1FEB0	2.0e-97	84.40	uncharacterized protein LOC111444740 OS=Cucurbita moschata OX=3662 GN=LOC1114447...	[more]
A0A6J1JXH7	5.9e-94	82.11	uncharacterized protein LOC111489196 OS=Cucurbita maxima OX=3661 GN=LOC111489196...	[more]
A0A0A0K8G0	1.5e-92	80.00	RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G00942...	[more]

BLAST of Spg039271 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05830.1	2.8e-56	55.24	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G01070.2	7.5e-33	50.38	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G37950.1	8.3e-32	52.94	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G59000.1	1.0e-29	44.03	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G01070.1	6.4e-16	65.31	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 90..143 e-value: 4.6E-17 score: 72.7
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 91..142 e-value: 5.0E-9 score: 36.1
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 83..149 score: 17.30924
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 79..151 e-value: 1.7E-13 score: 51.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..24
None	No IPR available	PANTHER	PTHR46214	ZINC FINGER, RING-CH-TYPE	coord: 4..218
None	No IPR available	PANTHER	PTHR46214:SF30	RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN	coord: 4..218
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 88..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg039271.1	Spg039271.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008270	zinc ion binding