Spg039264 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg039264
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description40S ribosomal protein S17-like
Locationscaffold10: 40991391 .. 40992780 (-)
RNA-Seq ExpressionSpg039264
SyntenySpg039264
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAATCCGAGTTCAACACGATGAGGTGGCGGAATCTGAAGGGAAGAATAGAAAAAGTTCCATACAAATAACCACAGAGAATGATTCCTCCCGTGGCAAGAAACCCTAAAGTAGCCCTTCTCTTATAACTCGCTCTCTCGCATTAGGGCTTCTCTCAAGTCGTAGCGGCAGCAGAACTTCGCTCTCTCTGGTACTCTTCAGAACCCTTTTGTTCTCCTTCCAGGTCAGTTCTTCTAACTAGGGTTTCCTAATTCTCTTCTTGATCGTTCGATTTTATAGAAATTGTATGTTCATTTTCATGTCGAGTTTTCCAGTTATCGAGTTTGTTAGATTCATCACTAGTTCTTATGTTTTCGGTGAATTAAATAGACGATTGATTGATTGATTCTGCCTCTTGATTTTGTTTAGTTATCGGTAATTTGTTGAGGGGTCTTGTTAATCTGTTTAGTGGTTGGCGAGAAAGAGAAATCTCTATCGCCCTGGTTACGAATCTGGCTTTGATTTTCACGTGGGTTCCTTTATGTGATTGCATTGCTGAGCCCTGTGTGATGATCAATGGTTTATAAGCTTGTAGCTACCTGATGTTGAATGTACATTTTCCAAAAATGCCGGTCGCAATATATATTTATTTGTCGGTTTTTTTTTTGTGTGTTTCTTAAGTTTGTTCTTCTAATTATAGGGTTGAATAATGTATGATTTTTCCTTGAATGATAATGAAGGAAGAATAAAAAGGAAAGTTATGGCCGTTTGTAGTTGTAGTGTATGGTAAAACACCACCTCAAATCAAAGGGTTTTGAACTGAGTGGATTGGTTCTTGACCTAGACTAAGACCATCGAGATATTTGTAAATATGATTTTGTTCGAAAATGTCATCTCTCTTCGTAGTTGCGAAATTGGTGTAATCTATGTTAGGTTGCTTCTTCTTATTCTCTCTCTTTTTTGCAGGTAAAGTTTAGTAGAAGATGGGTCGTGTTCGCACCAAGACTGTGAAGAAGTCTTCACGCCAGGTGATTGAAAGGTACTACTCTAAGATGACACTGGATTTCCACACAAACAAGAAGATCTTGGAAGAGGTTGCCATCATCCCATCAAAAAGGCTCCGAAACAAGATTGCTGGTTTCTCAACCCACTTGATGAAGAGAATTCAGAAGGGTCCAGTCAGGGGCATCTCATTGAAGCTGCAAGAAGAAGAGCGTGAGCGCCGTATGGACTTTGTGCCAGACGAATCAGCCATTAAGACCGACGAAATTAAGGTTGACAAGGAGACACTTGATATGCTTGCTGCTTTCGGCATGTCAGACATTCCCGGACTTGTGGAGGTTGAGCCACAGGCTATGATTCCACCCCAAGCTTTCGGCAGGGGTGCAGGTGGCCCAAGGAGATACTAA

mRNA sequence

ATGCAAATCCGAGTTCAACACGATGAGGTGGCGGAATCTGAAGGGAAGAATAGAAAAAGGCTTCTCTCAAGTCGTAGCGGCAGCAGAACTTCGCTCTCTCTGGTACTCTTCAGAACCCTTTTGTTCTCCTTCCAGAAGATGGGTCGTGTTCGCACCAAGACTGTGAAGAAGTCTTCACGCCAGGTGATTGAAAGGTACTACTCTAAGATGACACTGGATTTCCACACAAACAAGAAGATCTTGGAAGAGGTTGCCATCATCCCATCAAAAAGGCTCCGAAACAAGATTGCTGGTTTCTCAACCCACTTGATGAAGAGAATTCAGAAGGGTCCAGTCAGGGGCATCTCATTGAAGCTGCAAGAAGAAGAGCGTGAGCGCCGTATGGACTTTGTGCCAGACGAATCAGCCATTAAGACCGACGAAATTAAGGTTGACAAGGAGACACTTGATATGCTTGCTGCTTTCGGCATGTCAGACATTCCCGGACTTGTGGAGGTTGAGCCACAGGCTATGATTCCACCCCAAGCTTTCGGCAGGGGTGCAGGTGGCCCAAGGAGATACTAA

Coding sequence (CDS)

ATGCAAATCCGAGTTCAACACGATGAGGTGGCGGAATCTGAAGGGAAGAATAGAAAAAGGCTTCTCTCAAGTCGTAGCGGCAGCAGAACTTCGCTCTCTCTGGTACTCTTCAGAACCCTTTTGTTCTCCTTCCAGAAGATGGGTCGTGTTCGCACCAAGACTGTGAAGAAGTCTTCACGCCAGGTGATTGAAAGGTACTACTCTAAGATGACACTGGATTTCCACACAAACAAGAAGATCTTGGAAGAGGTTGCCATCATCCCATCAAAAAGGCTCCGAAACAAGATTGCTGGTTTCTCAACCCACTTGATGAAGAGAATTCAGAAGGGTCCAGTCAGGGGCATCTCATTGAAGCTGCAAGAAGAAGAGCGTGAGCGCCGTATGGACTTTGTGCCAGACGAATCAGCCATTAAGACCGACGAAATTAAGGTTGACAAGGAGACACTTGATATGCTTGCTGCTTTCGGCATGTCAGACATTCCCGGACTTGTGGAGGTTGAGCCACAGGCTATGATTCCACCCCAAGCTTTCGGCAGGGGTGCAGGTGGCCCAAGGAGATACTAA

Protein sequence

MQIRVQHDEVAESEGKNRKRLLSSRSGSRTSLSLVLFRTLLFSFQKMGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAAFGMSDIPGLVEVEPQAMIPPQAFGRGAGGPRRY
Homology
[Close]
BLAST of Spg039264 vs. NCBI nr
Match: XP_008456611.1 (PREDICTED: 40S ribosomal protein S17-3 [Cucumis melo] >TYK11778.1 40S ribosomal protein S17-3 [Cucumis melo var. makuwa])

HSP 1 Score: 271.9 bits (694), Expect = 4.0e-69
Identity = 140/141 (99.29%), Postives = 140/141 (99.29%), Query Frame = 0 

Query: 47  MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 106
           MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 107 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAAFGMSDIPGLVEV 166
           IQKGPVRGISLKLQEEERERRMDFVPDESAIK DEIKVDKETLDMLAAFGMSDIPGLVEV
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPDESAIKIDEIKVDKETLDMLAAFGMSDIPGLVEV 120

Query: 167 EPQAMIPPQAFGRGAGGPRRY 188
           EPQAMIPPQAFGRGAGGPRRY
Sbjct: 121 EPQAMIPPQAFGRGAGGPRRY 141

[Close]
BLAST of Spg039264 vs. NCBI nr
Match: XP_038884069.1 (40S ribosomal protein S17-4 [Benincasa hispida])

HSP 1 Score: 271.2 bits (692), Expect = 6.8e-69
Identity = 139/141 (98.58%), Postives = 140/141 (99.29%), Query Frame = 0 

Query: 47  MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 106
           MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 107 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAAFGMSDIPGLVEV 166
           IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAAFGMS+IPGLVEV
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAAFGMSEIPGLVEV 120

Query: 167 EPQAMIPPQAFGRGAGGPRRY 188
           EPQ MIPPQAFGRGAGGPRRY
Sbjct: 121 EPQTMIPPQAFGRGAGGPRRY 141

[Close]
BLAST of Spg039264 vs. NCBI nr
Match: XP_004140911.1 (40S ribosomal protein S17-3 [Cucumis sativus] >KGN46049.1 hypothetical protein Csa_005187 [Cucumis sativus])

HSP 1 Score: 270.8 bits (691), Expect = 8.9e-69
Identity = 139/141 (98.58%), Postives = 140/141 (99.29%), Query Frame = 0 

Query: 47  MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 106
           MGRVRTKTVKKSSRQVIE+YYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVIEKYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 107 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAAFGMSDIPGLVEV 166
           IQKGPVRGISLKLQEEERERRMDFVPDESAIK DEIKVDKETLDMLAAFGMSDIPGLVEV
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPDESAIKIDEIKVDKETLDMLAAFGMSDIPGLVEV 120

Query: 167 EPQAMIPPQAFGRGAGGPRRY 188
           EPQAMIPPQAFGRGAGGPRRY
Sbjct: 121 EPQAMIPPQAFGRGAGGPRRY 141

[Close]
BLAST of Spg039264 vs. NCBI nr
Match: XP_022134321.1 (40S ribosomal protein S17-4 [Momordica charantia])

HSP 1 Score: 267.3 bits (682), Expect = 9.9e-68
Identity = 138/141 (97.87%), Postives = 139/141 (98.58%), Query Frame = 0 

Query: 47  MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 106
           MGRVRTKTVKKSSRQVIERYYS+MTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 107 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAAFGMSDIPGLVEV 166
           IQKGPVRGISLKLQEEERERRMDFVPDESAIK DEIKVDKETLDMLAAFGMSDIPGLVEV
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPDESAIKIDEIKVDKETLDMLAAFGMSDIPGLVEV 120

Query: 167 EPQAMIPPQAFGRGAGGPRRY 188
           EPQAMIPPQAFGRGA GPRRY
Sbjct: 121 EPQAMIPPQAFGRGAVGPRRY 141

[Close]
BLAST of Spg039264 vs. NCBI nr
Match: XP_022961398.1 (40S ribosomal protein S17-4 [Cucurbita moschata] >XP_022990482.1 40S ribosomal protein S17-4 [Cucurbita maxima] >XP_023523463.1 40S ribosomal protein S17-4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 266.2 bits (679), Expect = 2.2e-67
Identity = 138/141 (97.87%), Postives = 138/141 (97.87%), Query Frame = 0 

Query: 47  MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 106
           MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 107 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAAFGMSDIPGLVEV 166
           IQKGPVRGISLKLQEEERERRMDFVPDESAIK DEIKVDKETLDMLAAFGMSDIPGLVEV
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPDESAIKIDEIKVDKETLDMLAAFGMSDIPGLVEV 120

Query: 167 EPQAMIPPQAFGRGAGGPRRY 188
           EPQAM P QAFGRGAGGPRRY
Sbjct: 121 EPQAMAPLQAFGRGAGGPRRY 141

[Close]
BLAST of Spg039264 vs. ExPASy Swiss-Prot
Match: Q9LZ17 (40S ribosomal protein S17-4 OS=Arabidopsis thaliana OX=3702 GN=RPS17D PE=2 SV=3)

HSP 1 Score: 233.4 bits (594), Expect = 2.1e-60
Identity = 125/142 (88.03%), Postives = 130/142 (91.55%), Query Frame = 0 

Query: 47  MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 106
           MGRVRTKTVKKSSRQVIE+YYS+MTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 107 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAAFGMSDIPGLVEV 166
           IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETL+MLA+ GMSD PG+  V
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTPGISAV 120

Query: 167 EP-QAMIPPQAFGRGAGGPRRY 188
           EP QAM P  AFG G   PRRY
Sbjct: 121 EPQQAMAPIAAFG-GGRAPRRY 141

[Close]
BLAST of Spg039264 vs. ExPASy Swiss-Prot
Match: P49215 (40S ribosomal protein S17 OS=Solanum lycopersicum OX=4081 GN=RPS17 PE=2 SV=3)

HSP 1 Score: 230.7 bits (587), Expect = 1.3e-59
Identity = 121/139 (87.05%), Postives = 129/139 (92.81%), Query Frame = 0 

Query: 47  MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 106
           MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 107 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAAFGMSDIPGLVE- 166
           IQKGPVRGISLKLQEEERERRMDFVPDESAIKTD I+VDKETLDML+A GMSD+PG+V+ 
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDLIEVDKETLDMLSALGMSDLPGVVKQ 120

Query: 167 -VEPQAMIPPQAFGRGAGG 184
             EPQA+    ++GRG GG
Sbjct: 121 AAEPQAVAALPSYGRGGGG 139

[Close]
BLAST of Spg039264 vs. ExPASy Swiss-Prot
Match: Q9SJ36 (40S ribosomal protein S17-2 OS=Arabidopsis thaliana OX=3702 GN=RPS17B PE=2 SV=3)

HSP 1 Score: 228.8 bits (582), Expect = 5.1e-59
Identity = 124/142 (87.32%), Postives = 129/142 (90.85%), Query Frame = 0 

Query: 47  MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 106
           MGRVRTKTVKKSSRQVIE+YYS+MTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 107 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAAFGMSDIPGLVEV 166
           IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETL+MLA+ GMSD  G+  V
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTSGISAV 120

Query: 167 EP-QAMIPPQAFGRGAGGPRRY 188
           EP QAM P  AFG  A  PRRY
Sbjct: 121 EPQQAMAPIAAFGGRA--PRRY 140

[Close]
BLAST of Spg039264 vs. ExPASy Swiss-Prot
Match: P49205 (40S ribosomal protein S17-1 OS=Arabidopsis thaliana OX=3702 GN=RPS17A PE=2 SV=3)

HSP 1 Score: 228.4 bits (581), Expect = 6.7e-59
Identity = 123/142 (86.62%), Postives = 129/142 (90.85%), Query Frame = 0 

Query: 47  MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 106
           MGRVRTKTVKKSSRQVIE+YYS+MTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 107 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAAFGMSDIPGLVEV 166
           IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETL+MLA+ GMSD  G+  V
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTLGISAV 120

Query: 167 EP-QAMIPPQAFGRGAGGPRRY 188
           +P QAM P  AFG G   PRRY
Sbjct: 121 DPQQAMAPIPAFG-GGRAPRRY 141

[Close]
BLAST of Spg039264 vs. ExPASy Swiss-Prot
Match: Q9SQZ1 (40S ribosomal protein S17-3 OS=Arabidopsis thaliana OX=3702 GN=RPS17C PE=2 SV=3)

HSP 1 Score: 226.1 bits (575), Expect = 3.3e-58
Identity = 117/140 (83.57%), Postives = 127/140 (90.71%), Query Frame = 0 

Query: 47  MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 106
           MGRVRTKTVKKSSRQVIE+YYS+MTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 107 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAAFGMSDIPGLVEV 166
           IQKGPVRGISLKLQEEERERRMDFVPDESAIK D++KVDKETL+MLA+ GMSDI G+ +V
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPDESAIKIDDVKVDKETLEMLASLGMSDIAGISQV 120

Query: 167 EPQAMIPPQAFGRGAGGPRR 187
           E Q  + P  FGR AG  +R
Sbjct: 121 ETQQAMAPAVFGRPAGRYQR 140

[Close]
BLAST of Spg039264 vs. ExPASy TrEMBL
Match: A0A5D3CKV8 (40S ribosomal protein S17-3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G001050 PE=3 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.9e-69
Identity = 140/141 (99.29%), Postives = 140/141 (99.29%), Query Frame = 0 

Query: 47  MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 106
           MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 107 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAAFGMSDIPGLVEV 166
           IQKGPVRGISLKLQEEERERRMDFVPDESAIK DEIKVDKETLDMLAAFGMSDIPGLVEV
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPDESAIKIDEIKVDKETLDMLAAFGMSDIPGLVEV 120

Query: 167 EPQAMIPPQAFGRGAGGPRRY 188
           EPQAMIPPQAFGRGAGGPRRY
Sbjct: 121 EPQAMIPPQAFGRGAGGPRRY 141

[Close]
BLAST of Spg039264 vs. ExPASy TrEMBL
Match: A0A1S3C4X5 (40S ribosomal protein S17-3 OS=Cucumis melo OX=3656 GN=LOC103496520 PE=3 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.9e-69
Identity = 140/141 (99.29%), Postives = 140/141 (99.29%), Query Frame = 0 

Query: 47  MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 106
           MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 107 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAAFGMSDIPGLVEV 166
           IQKGPVRGISLKLQEEERERRMDFVPDESAIK DEIKVDKETLDMLAAFGMSDIPGLVEV
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPDESAIKIDEIKVDKETLDMLAAFGMSDIPGLVEV 120

Query: 167 EPQAMIPPQAFGRGAGGPRRY 188
           EPQAMIPPQAFGRGAGGPRRY
Sbjct: 121 EPQAMIPPQAFGRGAGGPRRY 141

[Close]
BLAST of Spg039264 vs. ExPASy TrEMBL
Match: A0A0A0KB47 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G046270 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 4.3e-69
Identity = 139/141 (98.58%), Postives = 140/141 (99.29%), Query Frame = 0 

Query: 47  MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 106
           MGRVRTKTVKKSSRQVIE+YYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVIEKYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 107 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAAFGMSDIPGLVEV 166
           IQKGPVRGISLKLQEEERERRMDFVPDESAIK DEIKVDKETLDMLAAFGMSDIPGLVEV
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPDESAIKIDEIKVDKETLDMLAAFGMSDIPGLVEV 120

Query: 167 EPQAMIPPQAFGRGAGGPRRY 188
           EPQAMIPPQAFGRGAGGPRRY
Sbjct: 121 EPQAMIPPQAFGRGAGGPRRY 141

[Close]
BLAST of Spg039264 vs. ExPASy TrEMBL
Match: A0A6J1BXJ2 (40S ribosomal protein S17-4 OS=Momordica charantia OX=3673 GN=LOC111006610 PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 4.8e-68
Identity = 138/141 (97.87%), Postives = 139/141 (98.58%), Query Frame = 0 

Query: 47  MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 106
           MGRVRTKTVKKSSRQVIERYYS+MTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 107 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAAFGMSDIPGLVEV 166
           IQKGPVRGISLKLQEEERERRMDFVPDESAIK DEIKVDKETLDMLAAFGMSDIPGLVEV
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPDESAIKIDEIKVDKETLDMLAAFGMSDIPGLVEV 120

Query: 167 EPQAMIPPQAFGRGAGGPRRY 188
           EPQAMIPPQAFGRGA GPRRY
Sbjct: 121 EPQAMIPPQAFGRGAVGPRRY 141

[Close]
BLAST of Spg039264 vs. ExPASy TrEMBL
Match: A0A6J1JIV8 (40S ribosomal protein S17-4 OS=Cucurbita maxima OX=3661 GN=LOC111487331 PE=3 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.1e-67
Identity = 138/141 (97.87%), Postives = 138/141 (97.87%), Query Frame = 0 

Query: 47  MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 106
           MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 107 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAAFGMSDIPGLVEV 166
           IQKGPVRGISLKLQEEERERRMDFVPDESAIK DEIKVDKETLDMLAAFGMSDIPGLVEV
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPDESAIKIDEIKVDKETLDMLAAFGMSDIPGLVEV 120

Query: 167 EPQAMIPPQAFGRGAGGPRRY 188
           EPQAM P QAFGRGAGGPRRY
Sbjct: 121 EPQAMAPLQAFGRGAGGPRRY 141

[Close]
BLAST of Spg039264 vs. TAIR 10
Match: AT5G04800.1 (Ribosomal S17 family protein )

HSP 1 Score: 233.4 bits (594), Expect = 1.5e-61
Identity = 125/142 (88.03%), Postives = 130/142 (91.55%), Query Frame = 0 

Query: 47  MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 106
           MGRVRTKTVKKSSRQVIE+YYS+MTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 107 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAAFGMSDIPGLVEV 166
           IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETL+MLA+ GMSD PG+  V
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTPGISAV 120

Query: 167 EP-QAMIPPQAFGRGAGGPRRY 188
           EP QAM P  AFG G   PRRY
Sbjct: 121 EPQQAMAPIAAFG-GGRAPRRY 141

[Close]
BLAST of Spg039264 vs. TAIR 10
Match: AT5G04800.2 (Ribosomal S17 family protein )

HSP 1 Score: 233.4 bits (594), Expect = 1.5e-61
Identity = 125/142 (88.03%), Postives = 130/142 (91.55%), Query Frame = 0 

Query: 47  MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 106
           MGRVRTKTVKKSSRQVIE+YYS+MTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 107 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAAFGMSDIPGLVEV 166
           IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETL+MLA+ GMSD PG+  V
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTPGISAV 120

Query: 167 EP-QAMIPPQAFGRGAGGPRRY 188
           EP QAM P  AFG G   PRRY
Sbjct: 121 EPQQAMAPIAAFG-GGRAPRRY 141

[Close]
BLAST of Spg039264 vs. TAIR 10
Match: AT5G04800.3 (Ribosomal S17 family protein )

HSP 1 Score: 233.4 bits (594), Expect = 1.5e-61
Identity = 125/142 (88.03%), Postives = 130/142 (91.55%), Query Frame = 0 

Query: 47  MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 106
           MGRVRTKTVKKSSRQVIE+YYS+MTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 107 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAAFGMSDIPGLVEV 166
           IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETL+MLA+ GMSD PG+  V
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTPGISAV 120

Query: 167 EP-QAMIPPQAFGRGAGGPRRY 188
           EP QAM P  AFG G   PRRY
Sbjct: 121 EPQQAMAPIAAFG-GGRAPRRY 141

[Close]
BLAST of Spg039264 vs. TAIR 10
Match: AT5G04800.4 (Ribosomal S17 family protein )

HSP 1 Score: 233.4 bits (594), Expect = 1.5e-61
Identity = 125/142 (88.03%), Postives = 130/142 (91.55%), Query Frame = 0 

Query: 47  MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 106
           MGRVRTKTVKKSSRQVIE+YYS+MTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 107 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAAFGMSDIPGLVEV 166
           IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETL+MLA+ GMSD PG+  V
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTPGISAV 120

Query: 167 EP-QAMIPPQAFGRGAGGPRRY 188
           EP QAM P  AFG G   PRRY
Sbjct: 121 EPQQAMAPIAAFG-GGRAPRRY 141

[Close]
BLAST of Spg039264 vs. TAIR 10
Match: AT2G05220.1 (Ribosomal S17 family protein )

HSP 1 Score: 228.8 bits (582), Expect = 3.6e-60
Identity = 124/142 (87.32%), Postives = 129/142 (90.85%), Query Frame = 0 

Query: 47  MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 106
           MGRVRTKTVKKSSRQVIE+YYS+MTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1   MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60

Query: 107 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAAFGMSDIPGLVEV 166
           IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETL+MLA+ GMSD  G+  V
Sbjct: 61  IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTSGISAV 120

Query: 167 EP-QAMIPPQAFGRGAGGPRRY 188
           EP QAM P  AFG  A  PRRY
Sbjct: 121 EPQQAMAPIAAFGGRA--PRRY 140

The following BLAST results are available for this feature:
BLAST of Spg039264 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008456611.14.0e-6999.29PREDICTED: 40S ribosomal protein S17-3 [Cucumis melo] >TYK11778.1 40S ribosomal ... [more]
XP_038884069.16.8e-6998.5840S ribosomal protein S17-4 [Benincasa hispida][more]
XP_004140911.18.9e-6998.5840S ribosomal protein S17-3 [Cucumis sativus] >KGN46049.1 hypothetical protein C... [more]
XP_022134321.19.9e-6897.8740S ribosomal protein S17-4 [Momordica charantia][more]
XP_022961398.12.2e-6797.8740S ribosomal protein S17-4 [Cucurbita moschata] >XP_022990482.1 40S ribosomal p... [more]
BLAST of Spg039264 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LZ172.1e-6088.0340S ribosomal protein S17-4 OS=Arabidopsis thaliana OX=3702 GN=RPS17D PE=2 SV=3[more]
P492151.3e-5987.0540S ribosomal protein S17 OS=Solanum lycopersicum OX=4081 GN=RPS17 PE=2 SV=3[more]
Q9SJ365.1e-5987.3240S ribosomal protein S17-2 OS=Arabidopsis thaliana OX=3702 GN=RPS17B PE=2 SV=3[more]
P492056.7e-5986.6240S ribosomal protein S17-1 OS=Arabidopsis thaliana OX=3702 GN=RPS17A PE=2 SV=3[more]
Q9SQZ13.3e-5883.5740S ribosomal protein S17-3 OS=Arabidopsis thaliana OX=3702 GN=RPS17C PE=2 SV=3[more]
BLAST of Spg039264 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CKV81.9e-6999.2940S ribosomal protein S17-3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A1S3C4X51.9e-6999.2940S ribosomal protein S17-3 OS=Cucumis melo OX=3656 GN=LOC103496520 PE=3 SV=1[more]
A0A0A0KB474.3e-6998.58Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G046270 PE=3 SV=1[more]
A0A6J1BXJ24.8e-6897.8740S ribosomal protein S17-4 OS=Momordica charantia OX=3673 GN=LOC111006610 PE=3 ... [more]
A0A6J1JIV81.1e-6797.8740S ribosomal protein S17-4 OS=Cucurbita maxima OX=3661 GN=LOC111487331 PE=3 SV=... [more]
BLAST of Spg039264 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G04800.11.5e-6188.03Ribosomal S17 family protein [more]
AT5G04800.21.5e-6188.03Ribosomal S17 family protein [more]
AT5G04800.31.5e-6188.03Ribosomal S17 family protein [more]
AT5G04800.41.5e-6188.03Ribosomal S17 family protein [more]
AT2G05220.13.6e-6087.32Ribosomal S17 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036401Ribosomal protein S17e-like superfamilyGENE3D1.10.60.20coord: 47..108
e-value: 3.0E-32
score: 112.0
IPR036401Ribosomal protein S17e-like superfamilySUPERFAMILY116820Rps17e-likecoord: 47..108
IPR001210Ribosomal protein S17ePFAMPF00833Ribosomal_S17ecoord: 47..165
e-value: 6.2E-59
score: 197.3
IPR001210Ribosomal protein S17ePANTHERPTHR1073240S RIBOSOMAL PROTEIN S17coord: 47..187
IPR001210Ribosomal protein S17eHAMAPMF_00511Ribosomal_S17ecoord: 47..109
score: 19.921467
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availablePANTHERPTHR10732:SF1340S RIBOSOMAL PROTEIN S17-4coord: 47..187
IPR018273Ribosomal protein S17e, conserved sitePROSITEPS00712RIBOSOMAL_S17Ecoord: 87..102

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg039264.1Spg039264.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome