Spg039090 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg039090
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Reverse transcriptase domain-containing protein
Location	scaffold13: 22397800 .. 22412969 (-)
RNA-Seq Expression	Spg039090
Synteny	Spg039090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCCCAACTTTGCTCCGTTTTGAGTTTTTCAGAGTTTGGAACACAAAGTTCGGTCCAATGAGAGATCTTTACGTGGTTTGGACGAGCAGGTCCAAACTTTTCTCCGTTCAAGTTTTGGAGATTTTGGAACAGAAAGTTCAACCCTATGAGAGGTCTTCAGGTCATTTGGATTACACATGGTCAAAATTTTGCTCCGTTTGAGTTTTGGAGTGTTTGATACACAAAGTTCGGTCGAATGAGAGATCTTTAGGTGGTTTGGACGAAGATGGTTCAAACTTTGATCCGTTTGAGTTTTTGAGAGTTTGGAACAAAAAATTCGCCCAATGAGAGGTCTTCGGGTGGTTTGGACAACAGATGGTCCAAACTTTGCTCCGTTTTGAGTTTTGGAGAGTTTGTACCACAAATTTCGGTTCAATGAGAGATCTTTAGGTCGTTTGGACGAAGATGGTCCAAACTTTTCTCCGTTTGAGTTTTGGAGAGTTTGGAGCACAAACTTCGGCCCAAGTGGGGAAGGAGTGATTTACTTCTTGTATGATTATGTTCCCAGCTCCCCACTCGGTCTTATCCCCAAAATTGTAGGCTCGGAACTTTGCTCCTTTTCTGTTTTTGAGAGTTCTTTAGGTGGTGTGGAGGACACATGGTCCAAACTTTGCTCCGTTTCTGTTTTTGAGAGCTCGGAACCCAAAGTTCGTCCCAATGAGAGTTTTTCATCTTGTTTGGAGGAACTTGGTCCAAAGTTTGCTCCGTTGGAGTTTTGGAGAGTTTGGAACTCAAAGTTCGGCCAAATGAGAGTTCTTCAGGTGGTGTGGACAACACATGGTCCAAACTTTGCTCCGTTTGAGTTTTCAAGAGTTTGAAACTCAAAGTTCTGCTCAATGAGAGTTCTTTAGGTGGTGTGGACGACACATGGTCCAAACTTTGCTCCGTATCAGATTTTAAGAGCTCGGAACCCAAAGTTCGTCCCAATGAGAGTTTTTCATCTTGTTTGGACGAACTTGGTCCAAACTTTGCTCTGTTTAAGTTTTTGAGAGTTTGAAACTCAAAGTTCGGCCCAATGAGAGTTCTTTAGGTGGTTTGGATGACCAATGATCCAAACCTTGCTTCGTTTTTGTTTTTGAGAGCACGGAACCCAAAGTTCGTCCCAATGAGAGTTTTTCATCTTGTTTGGACGAACTTGGTCCAAACTTTGCTCCGTTTGAGTTTTGGAAAGTTTAGAACTCAAAGTTCGACCCAGTGAAAGTTCTTTAGATGGTGTGGAGGACACACGGTCCAAACTGTGCGTCGTTTCTGTTTTTGAGAGCTCGGAACACAAAGTTCGTTCCAATGAGAGTTTTTCATCTTGTTTGGAGGAACTTGGTCCAAAGTTTGCTCCGTTGGAGTTTTGGAGAGTTTGGAACTCAAAGTTTTGCCAAATGAGAGTTCTTCAGGTGGTGTGGACGACACATGGTCCAAACTTTTCTCCGTTTGAGTTTTTGAGAGTTTAAAACTCAAAGTTCGGCCCAATGAGAGTTCTTTAGGTGGTTTGGACGACACATGGTCCAAACTTTGCTCCGTTTTTGTTTTTGAGAGCTCGGAACCGAAAGTTTGTCCCAATGAGAGTTTTTCATATTGTTTGGAAGAAGTTGGTCCAAACTTGGCTCCGTCGGAGTTTTGGAGAGTTTGGAACTCAAAGTTCGGCCGAATGAGAGTTCTTTAGGTGGTTTGGACAAAGATGGTCCAAATTTTGCTCTGTTTGAGTTTTGGAGAGATGATGGAAGAGATTGTCGAGGTCTCTTATCAAATAAATTTATAATCCTCAACCTCTAAAGCTAACTTGTAGCAGTAGAGGCCGGGGTCGATCACAGGGAGTCTATGCAAACAAATCTTTAATTCCTTAATTTGTTTAGGTAACCAAAAAGGGGGGAATTTATATTGGAAAGAAAGTAAACAAGGAAAGAAAACCAAATATGGAAAATAACAAAGAGGAAAGTAAGAGAATTGAATTTAAGGAAGAAATTAATACCTTAAAGAGATCATGCAACCGGGTTAGTCATGGTAAGTTCAATTCAATTAAATCATCAATTTCACTAATAAGTCAAAACAAGTTTAAGCTCGGCGTATTTCGGCAACAAACCGAGAACCATGATCCAACTATCACAAAAATGCAAACGCTAAGTTTGATTCTAGTTTAAACTAATTAATTGGCCGATTAATTAACCTAAACCGCAATGGGATCTAGCCGAGTTAATTCACATGCAACGGGCAACAAACCACAATTACAATTAATTAAATCATTTAGTTCTAGGGACGCATACGTATGAACATAACGTTAACCTATATGCTACTAAGAATTAGCAAGTGAATTTAGAGAGGGCGCGGTCAAGGTTGTCAATCTTTCCTACCACAATCTAAACTTATGGAAAAAGAACTAAAATCATATAAACCTGCATTGATAATTCAAACAAGAAATTTCATTAATAGAATATGATCATATTCTAAAGTTACTTGACATTTCAAAAATGTCAAGTAACTTAATTTTTCTTGTAGTGTGAACTTACTCTTGACACCCCGGTTACATGAATGAAGAGCTTAGCCTCTCATGGAGTAAGAGCAAGCTTGATTCTTCATGGAATACATCAAAGAAAGCAATAAAAACTAAAACTAAGAAGAATGGTGGAAAAGGGGGAGACAGATGGACTACAAAATTTTAGTGAATTATGTGTTGAGGGATGATTCTAAACCTACACCAAAGTCCTCTATTTATAGAGTTTCTTGGCCTTCAATTCGTGGTAGAATGGTGCTGAATTGGGTCTTCAAACAAGGAAAATTTCAACCAAAATTTGAAAAAATTCGATTCTGGAAACTGTCTAATGTCGCGACGCTAGCACACAGCGTCACGACGCTATGCCTTTGGATATGGAATGAATCTCTCGGATCAACATAGCGTCGAGACGCTATGGGTGCAGCGTCGAGACGCTGCAGCTTCAACTTGGCGTCCACGAAGTTTCCTTATTTGAGCAGCGTCCCGACTCTTCAATGGCAACGTCTCGACGTTGTGAAAGTTGCAAGGGCAGAATGGTCATTTTTCGCTCCGATTTTGCTCGTTTAAGTCCCGAATCGCTTTCGAATCTTCGGCGAGGACCTATAGACATATTATACTCATTTTAAAGCATTTTTCGCAAGGAATTCAACTAAGATAAGCAAATTGGGAGATTCTAAGTGTATAATAAATTGGTCTTGTCAAACATCCCCAACCTAAACCTTTCTAGTCCTCGAGCAAGCTAATATTATAATAAAAGAGATTATTATGCAATGCAATACTCATGACTCAATTTCTCAAAGATAAGCATGATAAACCTTTTACTTAAGAGAATTAAATGCAAGACTAGCATAGTTAGAGACAAATTAAAATTAGCCAAATTCTTTCTTATGCAAAATATGAGCTAAGTTTTCCCTAGAGATGTTTTGAAAAGTTCGAGAAGGACTTATTAAACTCCCTATTCCATCTTCCCTCTACACTGGACAAAGGCATAATGCATTAAAGGAAAGGAACAAACTAACTTGTTTAAGGATGCAAAGGGCTTTTTTTTGTTTGTTTTTTTTAATATTTAAACAAACTAAAGGGCCCTAAGCTTGCATATATTTATGATTTTTAAGGGTACTAGCTTTCACGCAACTAATGCAGGACCACATTTCCCGAGTTTTCTCTGGACGACCTAACTGATCACACTAGAGGTAGCTCTTTTTACCCCGGCAAGCTAAAAATATCTTTCTTTTTCTCACTCCCAAGCATTAAACAAGCTATTTTGCAAAAATTTCCTCTAAGCATGCTACCTATCCTATCGAGGTGACAACGGAGGCGTGAATCTTATTAAGCCATCTAAAACCAACGAAACTACGCTAGAAAGGACTTATGCTCAATTTAGTTAAAAAAAAATTTGAAAAATTTTAATGAAGTCTCTAAAAATGCTAGAATGCATGCAATTCAACTATAAGAAAAATATATACTCATGCTTTCCTTATCCTAGAAATTTCATAATCAATTATAGAGCATGGCATAAAATCTCAAAATTTTGTTTTCAAGTTTGCTCATTTTAAAGATAAATTTGAACACTGATTCAGATCAGTTCCCAGGTAGGAGGTGTCCCGTAAACCGTCAGCTTAATTACCTCCAGTCTTAGACAGAACTTCATTGGTTCGGGTTAGTTCCCAGGTAGGAGGTGTTCCGTAAACCGTCAACTTAAATACCTCCAGCCTTAGACAGAACTTTCCCGATTCAGGTTCTAATTTATTTTTAAATTGCTTAAAAATAATAGATCAGTTCAAAGCATAAAGCAAACATGCATATGTTTCCCACCCCCAACCTAAATATTACATTGTCCTCAATGTAAATTAAACATGGAAAGTGATGGACAAAAGGTAAAAAGGGAACAGAAAATGTAAACCCGAGACTTTCCTTAGATAATTTTCTCTTGTCATCTATTGGTGGTTTCATTGTTGGACTAAGTTGTGGGGAATTATCAATTTAAAAAGAAAGGAAAGAAGGGAATTAAATAAGTGAAGAAAAGAAAAGAAAAGAAAAGGAAAAGGAAAAGGGAAAAAGGAAAAAAAAAAAAAAGAAAAAAGAAAGAAAAAGAAAGCAAGTGGGAAAGGACAGCAAATACCTTCCACCACCGCTTCACTCATTTTTAGCCCACTACCAGCCCATTTCTTATCATTTTTCATTCCAAAAGTTACAGAGCACTTTAAGGAGAGAGTGAAGGAGGAGGAAGAAGAAGAATTTCGTGGTTTGAGGTTGAAGAAGATAGGGAAAAGCTCATGCAAAGCCAGCCATTGCAGGATCTGAGATCAACCTGTCAACCTCTGGTTTTTTATTAGGTTTGAGCTACACAGAAGAAATCAAGAGGTGAGGTTTGATTTTCTTGAAATTTAGTTCATTGTCTAACAAATTTCATGAAGAAAGCTTGAGCTAAATCGTATGAGAAGTTAATGGATTTTTTAATGGAAAACAGAGCACAGGATTTTCGAGCAAACCAGGAGGATCTCTGGTGTTCTCTGGTGTTTTGAGCATTCTGGGGTGTACAAGTTGAATCCGAAGCTCTATTTGGTATGGTTGGAAAGCTTATTCAATTATCTACAACTTTCATGTGAGCCAAAAATGACTTGAAGTAGGTTTAATTTCAGGAGGAAGATAAAGGGTAACAGAGAAGCTCGAATCTGTGTTGTCTGATTTCGGGGCATTTCTGGACAAATTGGTTGGGAATCTCGTTTTCATTTCTTCAGGTAAGTTGTAGAGTGTTCGAAAATGAAGAGTTTGATGTGTATTTCATTAATTTTGGTTCAGTATTGAGGAAGTTATGGGTGTTGGAAGTTAGGGTATAGAATCTGGAAAATCTGGAAAAGTAGAATGTGAATGTGATTCTTAATCCAATTGTTTAAAAATTCATGAGCATGGAAAGACAAAGCTATCTATGGTTCTAATGCTCGGTTTTGGTTATTTGACAGGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGGCAGTGAGTGACAAAATGAATTTCGAAAATGTTCTTAAACGGTTGTTCATGATTATATGTTTTACATGCTTTTCTATGAATGATACATGGTTTTTATGAACAGTTTCAAGCATGAGTTTTGAGCTTAGATTTTCTAATGAGGTTTATATACGAGCATGTGGCAAATGACTTTATGAAAAGTAGCTGAAACGATATCTTTTAAAGCAAAGTATGGATTAGCAAGTACTTTTAAACGATTTCCAGTTTTTCACGAGCAAGCTGAGTAAGCTTAAGTTTTACGAAAGATAACGATAAGCAAGCATGTTTTAATGTTTTCATGTGATTTTCTGAGATTTCTATTGACTACATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGATGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGATCATGTTAGTTAAAACGTTTGATGTACTTGATATGCCTTGCTAGATTTTTAATGACGAACTTGCGAGATATTTGATGACCGCAAAGTGCACGGGCCGCAAGTAATATAAAACGGTAGTAATACCGAGTATCGAATCCACAGGGAAGCGAAGCGAAAATTAAGCAAAAAATCTCTTGAGCACTAAAAGTACTTAGGCAAAATAATATTTAGGGAACAACCCATGCAAATAAGAGAAATTTAAAATTCAAAGCAGGAAAATAATTTGATCAATCAAATAAAAAAAAAATATGGAGAAAGAGATTTCTTTTAATGGGAAGAGGGGTCTTGAAAATCAATTATGAGCTAAACAATTGTTATAATTATCCTATCTCATTGCCCAACTAATTATACTCCTAGAATCTCCGTTAATCACATAGGTTCTCCTGTCGGTTTCCCCTAATTGTAATTAATTCATTTTAACAACCTAAGTGTCCTTAGCGCCATTAAAAATCATTAATTATTACGCTCTGATTCATTTTAGGAATCTAAGTTTAATCAACTAATCCCGGTGTCACGACGGGCAATTAAACTAGTTGCATGGATTATGATCTATCCTAACTTCTCTCCGTCGAGTTTCCATTAAGAATCGAATCATTACACAATTGGCCAGATTGAATAAAGCATTAAGCACATCCATACAAATAATTAGGAAAAAGGGCAAGAGACAGGTAATTATAACAACATTTCAACTATAATTTCATTTCAAGACCCCAAATTGGGGTTTAGCTATACATAGCTAAAATATCCACAACATTTACAATAGAAAGCATAATTTAAGAGCATAAAAGGAAAGGAATTGACCGTCGAAAAACCCCTTCGCTTGGCGCTCAGAGCTCCGCCGAACACTCCTTTGAGCTTCCTAAGATGCTCCCCAAAATTCCCCAAATATTTCCCACTAAAGAATTCTCTCAAAAAGGCTAGAAAGCCTTGAGAGAGGCTCCAAAGGAGCCAAAGGAAGGAAAGAATGGATTGAAGAATGAATTGATTGATGGTCAATGAGGCACCCAAGGGTGCCTTTTTATAGGCCCGGATTGGGGGTAGCGTCGCGACGCTACCTTGCACAGCGTCGCGACGCTGCAACGCACGCGGCTTGGGCAACACGAAAAGGGTAGCGTCGCGACGCTGCTTACATAGCGTCTCGACGCTGCCCTAAAATTCCAGATTTTTCAGCTTCTTTTTGGGCCTTCTTCTTCATTTCTTTTGGGCATTTTTTCATGAGTGTCTTCTTTGGGTCCCCTTTTGATCCATGCTTGGATTTGGGCTTCATTTGCTTCATTTTTTGCACTTTTTCTCCCAAAATCACCAACTTTGCTCCTAAGGACCAAATAACGGAATTCATTAAATATTTTCATTAAAAACACGATTAAAGCACAGAAAAGCCTAATAAATTGGGACTAAAATAGCGACATTTCTGCTCGCTATCAATATTGTAGAAAGCCTTTTTCATTACACGTTTATGTTAAACGCTTTGATTGAGCATATTTATACGTTTAAAGGTTTATCACGTGTTTGACTTCCGGATTTAGAGTTTTAAAGTTAGTCACTCACTGGGCTTCGTAGCTCATTCTTTCAAAATGTTTTTCCACTTTCAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACATCTGCTGAAAGCTCCAGCTCAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTTCATATTGTAAATGTTTTGTAAGGATCGGATAATATAACCCTAGAGGTCGTGGTTGTATAAACCCTAGTTGTATATGATTTTGGTTGTGATACCTATATCAGGTTATTATCCGAAACAAGTTATGTCAGGGCGGCACCTCGTGTTTGTTGGAAGTTTTTTTTTCAGGGATTCCGCTGTGTTCCGTTTCATGTAGAATGTTTTATATCTATGATTAGTATGTTTATCAGGTTCAACGTTCAGGAGGGTCAGCGGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACACCATCTTTCGGGCTAAGCTAGTAGGTGGTCCGGGAGGGGGTGTGACAGAAAAACTCCCCTGTTCAAGCATTGGGTTGGAAAAGGATGAAATTTTCCACAATTGGCAGAAATTTATAGAGATTTGGTGTAGGGGTCCTATAAGGCAATAAAGAAAGATAATTAAGGAAATGACAAAGGAATAAACTTCTAAATAAGGAAAGGATAGAAATTGGGTTGCCTCCCATAAGCGCAATTTTTTAACGTCGTTATGCTCGACAAGTTTGAACCAATCAACCCGGGCTGTCATCTTCAATGTTGTAGACAAATGGTTCAAGGCTTCCAAAGGATTCATCGTCAGAAGAAATATAATTATCATGGTCAGAAACAATAGTGCTTAGATTAGTAGAAGAATGAGGGTTATTACCAACTACCCTAAATGTCATTGTCTTTCCTTTAAATCCTACTGTAACAACTCCTGAATCCTACATCAATGTTTACCTTGGCCGTTTTCATGAAAGGGCGGCCCAAAATAATAGAGGTAGAAGTAGAGTTACATGGTGCAGGCAGAAGTAGAGTTACATGGTGCAGGCATATCAAGAATATAGAAATCAGTAGGAAAGACAAAATCCTCTACTTTAACAAGGACATTCTCATAGATACCTAAAGGAGTAATGCTAGATCTATCAGCTAATTGAATTATTACACTAGTCTCATGTAAATTAGTTAATTCTAACTCATGATATAGAGACACAGGCATAACATTGATTGAAGCTCCTAAGTCTAGCATGGCATGCTTAACATGGTGATGTCCTATCATGCAAGGTAAGGAAAACATACCTGGATTTAAGCATTTTTCAGGCAAAGGTTTGAAAGCAAGCATGGAAAGATTTTCACTAACCTTTTTGTTGGAGATTATCTTTTTGGTACACCATCTTTTCAAAAATTTGGCATACCTTGGAAATTGTTGAACGGCCTCCAATAGTGGGATGTTGACTGAAACCTTCCTGAATACTTCTAAGGCATCCTTGTCCTCTTCCTCCTTTTTCTTATTAGGTTGGACTAATCTAGAAGGAAAGGGAGCAGGCTCAATGTAATAAAAACACAACAGAGGGTTTAGAACTTACCTTATCGGTCTTTTCTTCTATATTTTTGGAATGAGTTGGAAGTGCCTTTAAGGTGGCTCCACTCCTAAGTGTGATTGCATTTAGACCTTCCTTTTTTGGAATTTCTGGCTGGGCAGTCAACTTTCCATATTGGACCTCCAATCTACTTATGGAAGTGGCCAATTGTGTAATTTGATTTCCCATATTTTGCATACCTGCCTTAGTCTCCTGTTGAAACTTAGAAGTAGATTCAGCTAAAGACTTAATCATATCTTCAAGAGACATACATGATTGGGAAGATTGCCCTCCAAAGTTCTGTTTTTTATTGTTGTTTTGGCCATAGCTAAAGTTAGGGTGATCCCTCCATCCTGGATTGTAAGTGTTGGAATAGGGATCGTACTTCCTACCTTGGCCATTCTAATTTGCATACCCTCCTATTGCGTTGACTTCTGCAGTTTGGCTTTCTTGCAACCGTGGACAGGAATCAGCGGGGTGGCCTTGGATTGAACAAATTCCACAAACTTTTTCCTTAGTAATTTTTCTTGTCACAAGTTGTTTAACAAGATCAGTAAGTTCAGACATTTTTGAATCAAGACTACTTACCTCATTCACTGCTACTGCTTTTGGTAATAGACCGGGAACTCGTGTTCCAAATTGTTGGGAATTTTTGGCCATGGAACATATGAGTGCTCGGGCCTTTGCTGCAGTTTTGTTCACCAATGCTCCTCCATTAGCTGCATCGATCATGCCTCGATCTGTGGGAAGTAAACCTTCATAGAAATATTGAATTAGCAATTGATCGGCTATTTGATGGTGAGGAAAACTAGCACATAATCTTTTAAAACGTTCCCAATATTCCTAAAGAGTTTCACCGGCAATTTGAGTGATACCGTAAATTTCTTTACGAAGAATGGCGACCCTACTTGCAGGAAAAAAAATTTCTAAAAATATTTTTTTCATGTCAGCCCAAGTATTAATTGAACCACTAGGAAGAAAATATAACCAATCTTTTGCCATATCTTTTAAAGAAAAAGGAAAAGCACGTAAACTTATTTGTTCGTCGGTTACACCGTTGGGTTTCATTCCCGTGCAAACGATGTAGAACTCCTTTAAGTGCTTGTGTGGGTTCTCCCCTGCGATTCCCCTGAAAAATATGCAAAAGATGGATTAGTCCAGCTTTCAATTCAAATGCACCTTCGGTCTCGGGATAAGTGATGCAAAGTGGTTGTTGGTTCAAATTCGGGGCCGCGAGTTGCATCAAGGTTTGCTCGGCCATAGCTCGTGGTTCGTTGACTTCCTCCCTTTTTGCCTTCCTTCGAAGTATACGTTCTTCCCTCGTGGTGTCAGGACAAAACAAAAATTCTCTATCCTGCGAAGAACGTGTTTGCATAAACTGTAGACAAAAAGTAGAAAAGTCAAATGAAAACAAAAAACGAAAGAAAAATTTGCCGAAGACTCCCCGGCAACGGCGCCAATTTGATGGAAGAGAATGTCGAGGTATCTTATCAAATAAATTTATAATCCTCAACCTCTAAAGCTAACTTGTAGCAGTAGCGGTCGGGGTCGATCACAGGGAGTCTATGCAAAAAAATCTTTAATTCCTTAATTGTTTTAGGTAACCAAAAAGGGGGGAATTTATATTGGAAATAAAGTAAATAAGGAAAGAAAACCAAATATGGAAGATAACAAAGAGGAAAGTAAGAGAAATAAATTTAAGGAAGAAATTAATACCTTAAAGAGATCATGCAACCAGGTTAGTCATGGTAAGTTCAATTCAATTAAATCATCAATTTCACTAATAAGTCAAAACAAGTTTAAGCTCGGCGTATTTCGGCAACAAACCGAGAACCATGATCCAACTATCACAAAAATGCAAACGCTAAGTTTGATTCTAGTTTAAACTAATTAATTGGCCGATTAATTAACCTAAACCGCAATGGGATCTAGCCGAGTTAATTCACATGCAACGGGCAACAAACCACAATTACAATTAATTAAATCATTTAGTTCTAGGGACGCATACGTATGAACATAACGTTAGCCTATATGCTACTAAGAATTAGCAAGTGAATTTAGAGAGGGCGCGGTCAAGGTTGTCAATCTTTCCTACCACAATCTAAACTTATGGAAAAAGAACTAAAATCATATAAACCTGCATTGATAATTCAAACAAGAAATTTCATTAATAGAATATGATCATATTCTAAAGTTACTTGACATTTCAAAAATGTCAAGTAACTTAATTTTTCTTGTAGTGTGAACTTACTCTTGACACCCCGGTTACATGAATGAAGAGCTTAGCCTCTCATGGAGTAAGAGCAAGCTTGATTCTTCATGGAATACATCAAAGAAAGCAATAAAAACTAAAACTAAGAAGAATGGTGGAAAAGGGGGAGACAGATGGACTACAAAATTTTAGTGAATTATGTGTTGAGGGATGATTCTAAACCTACACCAAAGTCCTCTATTTATAGAGTTTCTTGGCCTTCAATTCGTGGTAGAATGGTGCTGAATTGGGTCTTCAAACAAGGAAAATTTCAACCAAAATTTGAAAAAATTCGATTCTGGAAACTGTCTAATGTCGCGACGTTAGGACACAGCGTTGCGACGCTATGCCTTCAGATATGGAATGAATCTCTCGGATCAACATAGCGTCGAGACGCTGCAGCTTCAGCTTGGCGCCCACGAAGTTTCCTTATTTGAGTAGCGTCCCGACTCTTCAATGGCAGCGTCTCGACGCTGTGATAGTTCCAAGGGCAAAATGGTCATTTCTCGCTCCGGTTTTGCTCGTTTAAGCCCCAAATCGCTTCCAAAGCTCCAGCGAGGACTGATGACTTGCAAAAAGCAAGTAATTTGTCCTTTAAACTTAAGCTAAAAATAGGCTAAAAGATACAATGATGAGTTACCTCAACGCAAGAAGGAAGGAAAATGCGATGATTTTATGCGATAGGCTATATTCATGTATGCGGTGAGAAATTATAAAGGTATAGGGTGCTAATGCAACTAATTTAGTTGTTTGTTGTCCAAGTTTTTCTCAGCGCAAGCACACATCCCAAGACGATCAAGAGACAGACAAGATGGATGAAAAGACAATGCTGACACAACAGACGCAAGTGGGCTAAAAAGGGGCTGTAAAGGTGCAAGTTGGCTAATGATGACTGAAGAAAGTTGCTAATTACTTGGTGAAGTTGGCTTCCTTCCCCTATAAATAGAATCCACCTGCTCAAGAACAAACAACTCATAATTTACACAAGAATTGAGGGACGAGAGGAAGAGACGAAGATCAAGGAGAAAGAGAAATCATAGAGAACTGTGATTTAGAGTAGACTTGTGTTTGCAATGTATTATTGCATGATGTATTGTTTTGCTCGTATGAGCTAATTTTCCTCTTCAAGGCTTAGCGTAAGCACCTCATGCGGTGATAAGTATATTTTGTAAGCGCATAGTTTAATTGAATGAAACATTATTGCCGTCTACTTAGTTGACATACTATTTTCAATACTAACTCCCGCTTGGCCAGCCGGATGTGGTATCAGCATGCTAAATCCCTGACAGGTAATGCATGCAGACATCTCTAAGTAGAACAAGTTAGCGCATGACATGTAGTCTTGGTAGCATTAAAATCCTACAGCTAAAAGATAGTGCATGCATGAGCTTTGATTACGTTAAGACTAACACAGTCCCTTGTAAGTGTTTAGAGAACTAACCCTCACGCATGAACTAGCCAAATAACCAGTTGATAGTTTTTATGTCAAACGCAGGAGGAGTACCGGAAGGGAAACTTGTGATTTTTTCTCACTTAGGCATTAATGGATCAATTAGTCATGGTATGCACTACAAAGTCCTTATCAACGCATGAGGTTGCGACCGCGACAGCCTTGATACCATTCTCCTTAACACTTCTCTTTATACTCTTGTCACATGTTTTACTTTCTGCATAGTTTATTTTTCAAACTCACCAACTCTCTTATTTATTGTTTTATATAATATCACACGTTTTTGAGTTTAGATCAGTAAAAATTACTAAAGCTTCGCAAATAACCTTTCCCTATGGATTCGACCCTAGACTCACTAGGTATTACTTGATTTTGTCAATTTATACTTGGATTGATATATATCTACGACAAAATTGTCATTAATTTGTAAAGCATACTGAGTGACGACCAAGGACCTATACACATATTATACTCATTTTAAAGCATTTTTCGCAAGGAATTCAACTAAGAAAAGCAAATTGGGAGATTCTAAGTGTATAATAATTTTGTCTTATCAGGAGAGCTTGAAACACAAAGTTCGATTGAATGAGAGATCTTTAGGTGGTTTGGACAAAGAAGGTCCAAACTTTGCTCCGTTTGAGTTTTTTAGAGTTTGGAACACAAAGTTCGACCCAATGAGAGGTCTTCGGGTGGTTTGGACAACATAAGGTCCAAACTTTGCTCCGTTTTGAGTTTTGGAGAGTTTAGAACACAAAGTTCGGTTCAATGAGAGATCTTTAGGTCGTTTGGACAAAGATAGTCCAAACTTTGCTCCGTTCGAGTTTTGGAGAGTTTGGAACACAAAGTTCAGCCCTATGAGAGGTTTTCAGGTCCTTTGGATGACACATGGTCAAAATTTTGCTCCATTTGAGTTTTGGAGAGTTTGAAACACAAAGTTCGGTTGAATGAGAGATCTTTAGGTGGTTTGGACCAAGATGGTCCAAACATTGATCTGTTTGAGTTTTGAGAGTTTGGAACACAAAGTTCGGCCCAATGAGAGGTCTTCGGGTGGTTTGGACAACACATGGTCGAAACTTTGCTCCGTTTCAATTTTGGAGAGTTTTGAACACAAAGTTCGGTCCAATGAGAGATCTTTAGGTGGTTTGGACGAAGATGGTTCAAACTTTGCTCCGTTTGAGTTTTTGAGAGTTTGGAACAAAAAATTCGGCCAAATTAGAGGTCTTCAGGTGGTTTTGGACCAACTTTTCTCCGTTGGAGTTTTGGCGAATTTGGAACACAAGGTTCAGTCCAATGAGAGATCTTTAGGTGGTTTGGCGAAGAGGGTCCAAACTTTGTTGCGTTTGAGTTTTTGAAGGGAAGAGAGTTGTGTTATCGTCAGATGAAGTTATTGATGAGGGAATCACTTTGTGGGATCGGTCATTAGTAGGCCAATTTGGGGATTCGCAAATGCCTTTCACGTTTATCTCTCGGATCGTGAATCGTTTATGGGGTCATATTGAGGAGCCTATAGTGACAATTTTGGATAATGGTCTTATCATTTTCCAATTTATGAGTCATGAGTCCCGTAACTGGGTTTGGAAAATGGTCCCTGGCATATTGGTGGGAAGCCAATTCTCTTGCGTCGCTGGACTCTCGGGATTGTCCCTCAAACCTTTGTTTTTGATAGGGTCCCTATATGGGTCAAATTGCATAATGTTCCGTTAGAGTTTTGGATCCCAAGGGGGTTGAGTGTTGTGGCTAGTGCGGTGGGGAAGCTAGTTTGCCTGGATAACGCAGCTGAGGAGCGTCATCGGTTGTCCTTCGCTGGGGTTTGCGTTGAGATTGGGGTTGAGGATGTGTTGCCTTCCTCTATTACAGTACGTTGTAGAGGAGTGGATTTTGAGCTCCTGGTGGAATATGCTTGGAGGTCAAAACAGTGTTTGACTTGTAGGGTGTTTGGCCACTTAGGGTCAAACTGTCCCAAAGAAGCTCGGTCTGCCCCTCAGGTCCCTTCTCAGCCTTCGTCTTCTTTGGGTACTAATCAGTTGGTGCAAGTCTAGATAGCTCCGCCGACTTCAGGTCCGGTCTCCTCAGGCGCTAATCTTCAGTGGGTGCAAGTTTCGAGTATGGAGCGGCCCGTCTAGAGGGCTCACAAGCGATCTCCACAGAAGGCTCCTCTGAAGTCTCCCCCTAGGGGGTCGGGGTGCTTGCCAGTTATTCCCTTTACGGCTCTAGGAGGTGATGACGAGTCTAAGGCTCTTGCGTTGATTAAGGAGAATGTGGATCCTCCACCATTAGCTTTGGACTCTCCCTAG

mRNA sequence

ATGGTCCCAACTTTGCTCCGTTTTGAGTTTTTCAGAGTTTGGAACACAAAGTTCGGTCCAATGAGAGATCTTTACGTGGTTTGGACGAGCAGGTCCAAACTTTTCTCCGTTCAAGTTTTGGAGATTTTGGAACAGAAAGTTCAACCCTATGAGAGGTCTTCAGGTGGTGTGGAGGACACATGGTCCAAACTTTGCTCCGTTTCTGTTTTTGAGAGCTCGGAACCCAAAGTTCGTCCCAATGAGAGTTTTTCATCTTGTTTGGAGGAACTTGGTCCAAAGTTTGCTCCGTTGGAGTTTTGGAGAGTTTGGAACTCAAAGTTCGGCCAAATGAGAGTTCTTCAGGTGGTGTGGACAACACATGGTCCAAACTTTGCTCCAAGTTGGTCCAAACTTGGCTCCGTCGGAGTTTTGGAGAGTTTGGAACTCAAAGTTCGGCCGAATGAGAGTTCTTTAGGTGGTTTGGACAAAGATGGTCCAAATTTTGCTCTGTTTGAGTTTTGGAGAGATGATGGAAGAGATTGTCGAGCGTCACGACGCTATGCCTTTGGATATGGAATGAATCTCTCGGATCAACATAGCGTCGAGACGCTATGGGTGCAGCGTCGAGACGCTGCAGCTTCAACTTGGCGTCCACGAAAGCACAGGATTTTCGAGCAAACCAGGAGGATCTCTGGTGTTCTCTGGTGTTTTGAGCATTCTGGGGTGTACAAGTTGAATCCGAAGCTCTATTTGGTAAGTTGTAGAGTGTTCGAAAATGAAGAGTTTGATGTGTATTTCATTAATTTTGGTTCAGTATTGAGGAAGTTATGGGTGTTGGAAGTTAGGCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGATGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGATCATGTTAGCCCGGATTGGGGGTAGCGTCGCGACGCTACCTTGCACAGCGTCGCGACGCTGCAACGCACGCGGCTTGGGCAACACGAAAAGGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACATCTGCTGAAAGCTCCAGCTCAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTTCATATTGTAAATGTTTTGTTCAACGTTCAGGAGGGTCAGCGGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACACCATCTTTCGGGCTAAGCTAGTAGGTGGTCCGGGAGGGGCGTTGCGACGCTATGCCTTCAGATATGGAATGAATCTCTCGGATCAACATAGCGTCGAGACGCTGCAGCTTCAGCTTGGCGCCCACGAAGAGAGCTTGAAACACAAAGTTCGATTGAATGAGAGATCTTTAGGTGGTTTGGACAAAGAAGGTCCAAACTTTGCTCCGGGGTTGAGTGTTGTGGCTAGTGCGGTGGGGAAGCTAGTTTGCCTGGATAACGCAGCTGAGGAGCGTCATCGGTTGTCCTTCGCTGGGGTTTGCGTTGAGATTGGGGTTGAGGATGTGTTGCCTTCCTCTATTACAGTACGTTGTAGAGGAGTGGATTTTGAGCTCCTGGTGGAATATGCTTGGAGGTCAAAACAGTGTTTGACTTGTAGGGTGTTTGGCCACTTAGGGTCAAACTGTCCCAAAGAAGCTCGGTCTGCCCCTCAGGTCCCTTCTCAGCCTTCGTCTTCTTTGGGTACTAATCAGTTGAGGGCTCACAAGCGATCTCCACAGAAGGCTCCTCTGAAGTCTCCCCCTAGGGGGTCGGGGTGCTTGCCAGTTATTCCCTTTACGGCTCTAGGAGGTGATGACGAGTCTAAGGCTCTTGCGTTGATTAAGGAGAATGTGGATCCTCCACCATTAGCTTTGGACTCTCCCTAG

Coding sequence (CDS)

ATGGTCCCAACTTTGCTCCGTTTTGAGTTTTTCAGAGTTTGGAACACAAAGTTCGGTCCAATGAGAGATCTTTACGTGGTTTGGACGAGCAGGTCCAAACTTTTCTCCGTTCAAGTTTTGGAGATTTTGGAACAGAAAGTTCAACCCTATGAGAGGTCTTCAGGTGGTGTGGAGGACACATGGTCCAAACTTTGCTCCGTTTCTGTTTTTGAGAGCTCGGAACCCAAAGTTCGTCCCAATGAGAGTTTTTCATCTTGTTTGGAGGAACTTGGTCCAAAGTTTGCTCCGTTGGAGTTTTGGAGAGTTTGGAACTCAAAGTTCGGCCAAATGAGAGTTCTTCAGGTGGTGTGGACAACACATGGTCCAAACTTTGCTCCAAGTTGGTCCAAACTTGGCTCCGTCGGAGTTTTGGAGAGTTTGGAACTCAAAGTTCGGCCGAATGAGAGTTCTTTAGGTGGTTTGGACAAAGATGGTCCAAATTTTGCTCTGTTTGAGTTTTGGAGAGATGATGGAAGAGATTGTCGAGCGTCACGACGCTATGCCTTTGGATATGGAATGAATCTCTCGGATCAACATAGCGTCGAGACGCTATGGGTGCAGCGTCGAGACGCTGCAGCTTCAACTTGGCGTCCACGAAAGCACAGGATTTTCGAGCAAACCAGGAGGATCTCTGGTGTTCTCTGGTGTTTTGAGCATTCTGGGGTGTACAAGTTGAATCCGAAGCTCTATTTGGTAAGTTGTAGAGTGTTCGAAAATGAAGAGTTTGATGTGTATTTCATTAATTTTGGTTCAGTATTGAGGAAGTTATGGGTGTTGGAAGTTAGGCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGATGTTGAGTGTACTCCGTGACAACGATGCTGTCGTGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTAGATCGATCATGTTAGCCCGGATTGGGGGTAGCGTCGCGACGCTACCTTGCACAGCGTCGCGACGCTGCAACGCACGCGGCTTGGGCAACACGAAAAGGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACATCTGCTGAAAGCTCCAGCTCAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTTCATATTGTAAATGTTTTGTTCAACGTTCAGGAGGGTCAGCGGGTATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACACCATCTTTCGGGCTAAGCTAGTAGGTGGTCCGGGAGGGGCGTTGCGACGCTATGCCTTCAGATATGGAATGAATCTCTCGGATCAACATAGCGTCGAGACGCTGCAGCTTCAGCTTGGCGCCCACGAAGAGAGCTTGAAACACAAAGTTCGATTGAATGAGAGATCTTTAGGTGGTTTGGACAAAGAAGGTCCAAACTTTGCTCCGGGGTTGAGTGTTGTGGCTAGTGCGGTGGGGAAGCTAGTTTGCCTGGATAACGCAGCTGAGGAGCGTCATCGGTTGTCCTTCGCTGGGGTTTGCGTTGAGATTGGGGTTGAGGATGTGTTGCCTTCCTCTATTACAGTACGTTGTAGAGGAGTGGATTTTGAGCTCCTGGTGGAATATGCTTGGAGGTCAAAACAGTGTTTGACTTGTAGGGTGTTTGGCCACTTAGGGTCAAACTGTCCCAAAGAAGCTCGGTCTGCCCCTCAGGTCCCTTCTCAGCCTTCGTCTTCTTTGGGTACTAATCAGTTGAGGGCTCACAAGCGATCTCCACAGAAGGCTCCTCTGAAGTCTCCCCCTAGGGGGTCGGGGTGCTTGCCAGTTATTCCCTTTACGGCTCTAGGAGGTGATGACGAGTCTAAGGCTCTTGCGTTGATTAAGGAGAATGTGGATCCTCCACCATTAGCTTTGGACTCTCCCTAG

Protein sequence

MVPTLLRFEFFRVWNTKFGPMRDLYVVWTSRSKLFSVQVLEILEQKVQPYERSSGGVEDTWSKLCSVSVFESSEPKVRPNESFSSCLEELGPKFAPLEFWRVWNSKFGQMRVLQVVWTTHGPNFAPSWSKLGSVGVLESLELKVRPNESSLGGLDKDGPNFALFEFWRDDGRDCRASRRYAFGYGMNLSDQHSVETLWVQRRDAAASTWRPRKHRIFEQTRRISGVLWCFEHSGVYKLNPKLYLVSCRVFENEEFDVYFINFGSVLRKLWVLEVRPEAIWYRVHTGYIPLLMLSVLRDNDAVVSAGRAPLHRRTSKRWLYWACPTQRRSIMLARIGGSVATLPCTASRRCNARGLGNTKRVEIELPVPDTLPTSAESSSSSSSTWVELYIESVHIVNVLFNVQEGQRVSLEEDDVRWLHTIFRAKLVGGPGGALRRYAFRYGMNLSDQHSVETLQLQLGAHEESLKHKVRLNERSLGGLDKEGPNFAPGLSVVASAVGKLVCLDNAAEERHRLSFAGVCVEIGVEDVLPSSITVRCRGVDFELLVEYAWRSKQCLTCRVFGHLGSNCPKEARSAPQVPSQPSSSLGTNQLRAHKRSPQKAPLKSPPRGSGCLPVIPFTALGGDDESKALALIKENVDPPPLALDSP

Homology

[Close]

BLAST of Spg039090 vs. NCBI nr
Match: KAA0065516.1 (uncharacterized protein E6C27_scaffold638G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 119.4 bits (298), Expect = 1.1e-22
Identity = 78/157 (49.68%), Postives = 85/157 (54.14%), Query Frame = 0


Query: 290 LLMLSVLRDNDAVVSAG------------RAPLHRRTSKRWLYWACPTQRRSIMLARIGG 349
           L  LSVLRDNDAVVSAG            RAPLHRRTSKRWLYWACPT RRS+ML +   
Sbjct: 540 LSTLSVLRDNDAVVSAGGPHYDKDDGNAVRAPLHRRTSKRWLYWACPTPRRSVMLVKT-F 599

Query: 350 SVATLPCTASRRCNARGLGNTKRVEIELPVPDTLPTSAESSSSSSSTWVELYIESVHIVN 409
            V  +P                 VEIEL VPDTLPTSAESS S+S         S  IV 
Sbjct: 600 DVLVMP-----------------VEIELSVPDTLPTSAESSESNS--------RSAGIV- 656

Query: 410 VLFNVQEGQRVSLEEDDVRWLHTIFRAKLVGGPGGAL 435
                          DDV WLH +FRAK  GGPGG++
Sbjct: 660 -------------RGDDVCWLHVVFRAKTTGGPGGSV 656

[Close]

BLAST of Spg039090 vs. NCBI nr
Match: TYJ98800.1 (uncharacterized protein E5676_scaffold1625G00140 [Cucumis melo var. makuwa])

HSP 1 Score: 119.4 bits (298), Expect = 1.1e-22
Identity = 78/157 (49.68%), Postives = 85/157 (54.14%), Query Frame = 0


Query: 290 LLMLSVLRDNDAVVSAG------------RAPLHRRTSKRWLYWACPTQRRSIMLARIGG 349
           L  LSVLRDNDAVVSAG            RAPLHRRTSKRWLYWACPT RRS+ML +   
Sbjct: 126 LSTLSVLRDNDAVVSAGGPHYDKDDGNAVRAPLHRRTSKRWLYWACPTPRRSVMLVKT-F 185

Query: 350 SVATLPCTASRRCNARGLGNTKRVEIELPVPDTLPTSAESSSSSSSTWVELYIESVHIVN 409
            V  +P                 VEIEL VPDTLPTSAESS S+S         S  IV 
Sbjct: 186 DVLVMP-----------------VEIELSVPDTLPTSAESSESNS--------RSAGIV- 242

Query: 410 VLFNVQEGQRVSLEEDDVRWLHTIFRAKLVGGPGGAL 435
                          DDV WLH +FRAK  GGPGG++
Sbjct: 246 -------------RGDDVCWLHVVFRAKTTGGPGGSV 242

[Close]

BLAST of Spg039090 vs. NCBI nr
Match: KAA0037581.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 118.6 bits (296), Expect = 2.0e-22
Identity = 92/231 (39.83%), Postives = 114/231 (49.35%), Query Frame = 0


Query: 235 VYKLNPKLYLVSC----RVFE---NEEFDVYFINFGSVLRKLWVLEVR---------PEA 294
           V+K N KLYL+      R+     + +F + ++       +LWVLEVR         P  
Sbjct: 26  VHKSNQKLYLIRSGREPRILYCLCSGQFWMNWLRISFSFLQLWVLEVRISNLENLEMPRG 85

Query: 295 IWYRVHTGYI------PLLMLSVLRDNDAVVSAGRAPLHRRTSKRWLYWACPTQRRSIML 354
               + T  I      PL  LSVL DNDAVVSAG+APL +R       W C T       
Sbjct: 86  NRLSLQTEEIDKTVIFPLSTLSVLSDNDAVVSAGQAPLRQRR------WECRTG------ 145

Query: 355 ARIGGSVATLPCTASRRCNARGLGNTKRVEIELPVPDTLPTSAESSSSSSSTWVELYIES 414
                     P T+  +     + +T  VEIELPVPD LPTSAESS S+SSTW+ELY ES
Sbjct: 146 ----------PTTSFFK-----MFSTFLVEIELPVPDILPTSAESSRSNSSTWLELYFES 205

Query: 415 VHI---VNVLFNVQEGQRVSL------EEDDVRWLHTIFRAKLVGGPGGAL 435
           VH+     V+   +  Q   L        DDV WLH IFRAK  GGPGG +
Sbjct: 206 VHVEMFYKVILQTKRCQGCILWSAWIVRGDDVCWLHAIFRAKTAGGPGGGV 229

[Close]

BLAST of Spg039090 vs. NCBI nr
Match: TYK03091.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 118.6 bits (296), Expect = 2.0e-22
Identity = 92/231 (39.83%), Postives = 114/231 (49.35%), Query Frame = 0


Query: 235 VYKLNPKLYLVSC----RVFE---NEEFDVYFINFGSVLRKLWVLEVR---------PEA 294
           V+K N KLYL+      R+     + +F + ++       +LWVLEVR         P  
Sbjct: 26  VHKSNQKLYLIRSGREPRILYCLCSGQFWMNWLRISFSFLQLWVLEVRISNLENLEMPRG 85

Query: 295 IWYRVHTGYI------PLLMLSVLRDNDAVVSAGRAPLHRRTSKRWLYWACPTQRRSIML 354
               + T  I      PL  LSVL DNDAVVSAG+APL +R       W C T       
Sbjct: 86  NRLSLQTEEIDKTVIFPLSTLSVLSDNDAVVSAGQAPLRQRR------WECRTG------ 145

Query: 355 ARIGGSVATLPCTASRRCNARGLGNTKRVEIELPVPDTLPTSAESSSSSSSTWVELYIES 414
                     P T+  +     + +T  VEIELPVPD LPTSAESS S+SSTW+ELY ES
Sbjct: 146 ----------PTTSFFK-----MFSTFLVEIELPVPDILPTSAESSRSNSSTWLELYFES 205

Query: 415 VHI---VNVLFNVQEGQRVSL------EEDDVRWLHTIFRAKLVGGPGGAL 435
           VH+     V+   +  Q   L        DDV WLH IFRAK  GGPGG +
Sbjct: 206 VHVEMFYKVILQTKRCQGCILWSAWIVRGDDVCWLHAIFRAKTAGGPGGGV 229

[Close]

BLAST of Spg039090 vs. NCBI nr
Match: KAA0053207.1 (hypothetical protein E6C27_scaffold1192G00340 [Cucumis melo var. makuwa] >TYK00136.1 hypothetical protein E5676_scaffold2510G00220 [Cucumis melo var. makuwa])

HSP 1 Score: 115.5 bits (288), Expect = 1.7e-21
Identity = 86/206 (41.75%), Postives = 98/206 (47.57%), Query Frame = 0


Query: 235 VYKLNPKLYLVSCRVFENEEFDVYFINFGSVLRKLWVLEVR---------PEAIWYRVHT 294
           +YKLN KLYLVSC VFENEEF VYFINFG VLRKLWVLEVR         P      + T
Sbjct: 43  LYKLNQKLYLVSCIVFENEEFYVYFINFGYVLRKLWVLEVRISNLENLELPRGNRPSLQT 102

Query: 295 GYI------PLLMLSVLRDNDAVVSAGRAPLHRRTSKRWLYWACPTQRRSIMLARIGGSV 354
           G +      PL  LSVLRDNDAV                                     
Sbjct: 103 GELDKTIIFPLSTLSVLRDNDAV------------------------------------- 162

Query: 355 ATLPCTASRRCNARGLGNTKRVEIELPVPDTLPTSAESSSSSSSTWVELYIESVHI---- 413
                                VEIELP P+ LPTSAESS S+SSTW+ELY E VH+    
Sbjct: 163 ---------------------VEIELPAPNALPTSAESSRSNSSTWLELYFEFVHVEMFC 189

[Close]

BLAST of Spg039090 vs. ExPASy TrEMBL
Match: A0A5A7VGQ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold638G00090 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 5.6e-23
Identity = 78/157 (49.68%), Postives = 85/157 (54.14%), Query Frame = 0


Query: 290 LLMLSVLRDNDAVVSAG------------RAPLHRRTSKRWLYWACPTQRRSIMLARIGG 349
           L  LSVLRDNDAVVSAG            RAPLHRRTSKRWLYWACPT RRS+ML +   
Sbjct: 540 LSTLSVLRDNDAVVSAGGPHYDKDDGNAVRAPLHRRTSKRWLYWACPTPRRSVMLVKT-F 599

Query: 350 SVATLPCTASRRCNARGLGNTKRVEIELPVPDTLPTSAESSSSSSSTWVELYIESVHIVN 409
            V  +P                 VEIEL VPDTLPTSAESS S+S         S  IV 
Sbjct: 600 DVLVMP-----------------VEIELSVPDTLPTSAESSESNS--------RSAGIV- 656

Query: 410 VLFNVQEGQRVSLEEDDVRWLHTIFRAKLVGGPGGAL 435
                          DDV WLH +FRAK  GGPGG++
Sbjct: 660 -------------RGDDVCWLHVVFRAKTTGGPGGSV 656

[Close]

BLAST of Spg039090 vs. ExPASy TrEMBL
Match: A0A5D3BG85 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1625G00140 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 5.6e-23
Identity = 78/157 (49.68%), Postives = 85/157 (54.14%), Query Frame = 0


Query: 290 LLMLSVLRDNDAVVSAG------------RAPLHRRTSKRWLYWACPTQRRSIMLARIGG 349
           L  LSVLRDNDAVVSAG            RAPLHRRTSKRWLYWACPT RRS+ML +   
Sbjct: 126 LSTLSVLRDNDAVVSAGGPHYDKDDGNAVRAPLHRRTSKRWLYWACPTPRRSVMLVKT-F 185

Query: 350 SVATLPCTASRRCNARGLGNTKRVEIELPVPDTLPTSAESSSSSSSTWVELYIESVHIVN 409
            V  +P                 VEIEL VPDTLPTSAESS S+S         S  IV 
Sbjct: 186 DVLVMP-----------------VEIELSVPDTLPTSAESSESNS--------RSAGIV- 242

Query: 410 VLFNVQEGQRVSLEEDDVRWLHTIFRAKLVGGPGGAL 435
                          DDV WLH +FRAK  GGPGG++
Sbjct: 246 -------------RGDDVCWLHVVFRAKTTGGPGGSV 242

[Close]

BLAST of Spg039090 vs. ExPASy TrEMBL
Match: A0A5D3BTP3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00020 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 9.5e-23
Identity = 92/231 (39.83%), Postives = 114/231 (49.35%), Query Frame = 0


Query: 235 VYKLNPKLYLVSC----RVFE---NEEFDVYFINFGSVLRKLWVLEVR---------PEA 294
           V+K N KLYL+      R+     + +F + ++       +LWVLEVR         P  
Sbjct: 26  VHKSNQKLYLIRSGREPRILYCLCSGQFWMNWLRISFSFLQLWVLEVRISNLENLEMPRG 85

Query: 295 IWYRVHTGYI------PLLMLSVLRDNDAVVSAGRAPLHRRTSKRWLYWACPTQRRSIML 354
               + T  I      PL  LSVL DNDAVVSAG+APL +R       W C T       
Sbjct: 86  NRLSLQTEEIDKTVIFPLSTLSVLSDNDAVVSAGQAPLRQRR------WECRTG------ 145

Query: 355 ARIGGSVATLPCTASRRCNARGLGNTKRVEIELPVPDTLPTSAESSSSSSSTWVELYIES 414
                     P T+  +     + +T  VEIELPVPD LPTSAESS S+SSTW+ELY ES
Sbjct: 146 ----------PTTSFFK-----MFSTFLVEIELPVPDILPTSAESSRSNSSTWLELYFES 205

Query: 415 VHI---VNVLFNVQEGQRVSL------EEDDVRWLHTIFRAKLVGGPGGAL 435
           VH+     V+   +  Q   L        DDV WLH IFRAK  GGPGG +
Sbjct: 206 VHVEMFYKVILQTKRCQGCILWSAWIVRGDDVCWLHAIFRAKTAGGPGGGV 229

[Close]

BLAST of Spg039090 vs. ExPASy TrEMBL
Match: A0A5A7T7M6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G002250 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 9.5e-23
Identity = 92/231 (39.83%), Postives = 114/231 (49.35%), Query Frame = 0


Query: 235 VYKLNPKLYLVSC----RVFE---NEEFDVYFINFGSVLRKLWVLEVR---------PEA 294
           V+K N KLYL+      R+     + +F + ++       +LWVLEVR         P  
Sbjct: 26  VHKSNQKLYLIRSGREPRILYCLCSGQFWMNWLRISFSFLQLWVLEVRISNLENLEMPRG 85

Query: 295 IWYRVHTGYI------PLLMLSVLRDNDAVVSAGRAPLHRRTSKRWLYWACPTQRRSIML 354
               + T  I      PL  LSVL DNDAVVSAG+APL +R       W C T       
Sbjct: 86  NRLSLQTEEIDKTVIFPLSTLSVLSDNDAVVSAGQAPLRQRR------WECRTG------ 145

Query: 355 ARIGGSVATLPCTASRRCNARGLGNTKRVEIELPVPDTLPTSAESSSSSSSTWVELYIES 414
                     P T+  +     + +T  VEIELPVPD LPTSAESS S+SSTW+ELY ES
Sbjct: 146 ----------PTTSFFK-----MFSTFLVEIELPVPDILPTSAESSRSNSSTWLELYFES 205

Query: 415 VHI---VNVLFNVQEGQRVSL------EEDDVRWLHTIFRAKLVGGPGGAL 435
           VH+     V+   +  Q   L        DDV WLH IFRAK  GGPGG +
Sbjct: 206 VHVEMFYKVILQTKRCQGCILWSAWIVRGDDVCWLHAIFRAKTAGGPGGGV 229

[Close]

BLAST of Spg039090 vs. ExPASy TrEMBL
Match: A0A5A7UFD2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2510G00220 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 8.0e-22
Identity = 86/206 (41.75%), Postives = 98/206 (47.57%), Query Frame = 0


Query: 235 VYKLNPKLYLVSCRVFENEEFDVYFINFGSVLRKLWVLEVR---------PEAIWYRVHT 294
           +YKLN KLYLVSC VFENEEF VYFINFG VLRKLWVLEVR         P      + T
Sbjct: 43  LYKLNQKLYLVSCIVFENEEFYVYFINFGYVLRKLWVLEVRISNLENLELPRGNRPSLQT 102

Query: 295 GYI------PLLMLSVLRDNDAVVSAGRAPLHRRTSKRWLYWACPTQRRSIMLARIGGSV 354
           G +      PL  LSVLRDNDAV                                     
Sbjct: 103 GELDKTIIFPLSTLSVLRDNDAV------------------------------------- 162

Query: 355 ATLPCTASRRCNARGLGNTKRVEIELPVPDTLPTSAESSSSSSSTWVELYIESVHI---- 413
                                VEIELP P+ LPTSAESS S+SSTW+ELY E VH+    
Sbjct: 163 ---------------------VEIELPAPNALPTSAESSRSNSSTWLELYFEFVHVEMFC 189

The following BLAST results are available for this feature:

BLAST of Spg039090 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0065516.1	1.1e-22	49.68	uncharacterized protein E6C27_scaffold638G00090 [Cucumis melo var. makuwa]	[more]
TYJ98800.1	1.1e-22	49.68	uncharacterized protein E5676_scaffold1625G00140 [Cucumis melo var. makuwa]	[more]
KAA0037581.1	2.0e-22	39.83	reverse transcriptase [Cucumis melo var. makuwa]	[more]
TYK03091.1	2.0e-22	39.83	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0053207.1	1.7e-21	41.75	hypothetical protein E6C27_scaffold1192G00340 [Cucumis melo var. makuwa] >TYK001...	[more]

BLAST of Spg039090 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg039090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VGQ5	5.6e-23	49.68	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BG85	5.6e-23	49.68	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3BTP3	9.5e-23	39.83	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]
A0A5A7T7M6	9.5e-23	39.83	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold27...	[more]
A0A5A7UFD2	8.0e-22	41.75	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Spg039090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 572..594
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 570..610

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg039090.1	Spg039090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090304	nucleic acid metabolic process
molecular_function	GO:0016740	transferase activity