Spg038917 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg038917
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	LINE-1 retrotransposable element ORF2 protein
Location	scaffold12: 3025536 .. 3030416 (+)
RNA-Seq Expression	Spg038917
Synteny	Spg038917

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGGTTTCGTTCAAGCTGGAATCCAAGGGTTTCATGCCTTCGATCAAAGAAAAGAAGAAAATGAAGGGAATGGAGAAGAAAGAAGAAAAGTGGGGAAAAAAATAAAAAAGAAAAGAGAATGGAGTTGAGAAGAGAAGAAAGAAAAAAAAAAAACGTCGGCGGCGGCCGGCCGCCGCCGGTGTTGACAGTCGCCGGAGAAAGCTTGAAGAAGGAGAAGGGGTTGGGGGAAGAAAGAAGAAGCAGAGAGAGGAAGGAATTGGGAAAGAAATAAAAAAAGAATTATAAAATAATAATATTTTTATTATTTTGTTATATTTATATTTTAAAAAACTTAAAAAATAATTTTTTTAATAAAAAAATTTTGCCACGTCAGCAATCCGTTAAGTATTAACGGAAAATTGGATGGAGGGACCAAAATGAAACTAAAACCAAACCTTAGGGACTAAATTGTTGAGTTTGAAAACTCAGGGATCAAAATGAAACCTAACTCAAATCTCAGGGACTAAAAGTGTATTTTTCCCTTTCTATTTTTATTTTTAATCCTTTCTTCTCCAACAAGCTGAGTTTTTATGTCCAACATTGGTACTTTTCATTTTCGAGCATGTCCGGAACGTGCCCTTCACGTGTCCGGACGTGTATGAAATTAAAAAAAAATTGGACATGCAAAATAGCGTATCGAACACGTATCGGGCATGTGTCGGATACGTGTCTGACACGGACACTTCATACACTTCCTAGACTAAAATTTACGCACAATTTCGAACATTAGAAAGTTCAAAGTTTCCTATTGTTAGACCTGATTAATACATAGGAGGTGATATTTGTATGTTGGAAATCAGCTGTGGAACTTTGTTTTTGAACAAGAGACAAATCTTTTCATTGATAAATGAAAAGAGACTAATGCTCAAGGATACAAACTCCACAAGGGAGTGAAAAAAGAACCAAAAACCAAAAGGATCAATAAAGCAACCCAAAAAATAATGATAAACTAAAAAGAAACTCCCATAAATAGCTAGAAAAAACAAAATAGCAAGCAAACGCAAAGAAAAGGTATTGCCCCAAGAACCCCCCCCCCCCCCCTCCCAAACACTCTTTCCTCTCTCATCCTCCTCCAATCCACTAGGTTCTCATCTTCCTTTGCTGGTTTTTTCTTCCTGGCCCTGATTGTCTTCAACCTTCCCTTGTAAACTTCCTAGACCTCCACCTAGTTCTGGTTTTGAGTTTTCCTTGGATCCAGTTTTATCTCTTTTTGAGTATTCTTATGACGTTTTGTTGAAGTTACCTCTGAGCTTGTATTTTCGATCTGAAAGTCATGGAGGTGATAAGTCGCAAGATTATGAACTCTTTTTATTGCGTTTGGTCCGAAGAGGAACGTTTTTTTGTGGAAGATGTGGCTTTCAACAAGGTGATTTCTCTTTTTTCTTCCCTTTTGCTTTGGTTGGAATGTTCGTTGGTTGAGATTTTATGCCAGCCTATTCAGAAATTTTTCCGTAAGCAATTTCAGGATGCTTTTGGATTAATTCGTTTAGGCAAACTTCGTTCTTCTTCAGGCTGGTTTTTGCGCTGTGTTGTGCCTATTTCAGGTGGTAGACAATTCATCCATGTGCCAATTGGAAATTCCAAAGTGGGTTGTTATTTATTCAAGGAGCTTGTGGTCAATTCCATTAGGAGTTTTATGGTTTCTAATGCTCCAGTAACTTCTTGGGAGGAACCTCCTATGAGTTATGCTGAAACTCTCAAGATTCCCTTGAAGTCATTAGTACTAGGTTCTGGGGCTGTTGGTGTATCTAAGAATTCTACAGTTCTTCGAAATCGTAAGGTTTCTTACTGGATTAGAAAAAATCAGGGGGTCTTGAATGTTAATTTTGCAGATTTTTGGGTGGTGTCCAGATTATTTGCCCACAATAGTTGGAAAGAAATTATTGAGGTTTTGGAATTTCATTTCAAATCAAAGATTTCGATCAATCCGCTTTTTGCAGATAAAGCATTGCTCAAATTTGAAGACGATAAAGTTGTTAGTTCATTAGATTCGGTTGGGAAATGGAAGGTCTTTGGTAATTTTCATCTTTTGCTTGAAAAATGGAACAAAAAGCGTCATAGTCATCCCTGTTTTATGGAGGGTTATGGTGGTTGGATTGCGATCTAAGAATTTGCCTCTAGATTATTGGTGTAGACAATCTTTTGAAGCAATTGGAGAATATTTTGGGGGTTTAGTGAACATTTCAAGTGAAACTCTTAACATGACTATTGTTTCGGAAGCTAGAATTCAAGTTAAGACAAACTTATGTGGTTTTATGCCGGCTACTATTGAACTTAAAGATAGTTACAGAGGGAATATTTATCTTCATTTTGGAGATGTGTCTATTCTAGATTCTCCAAATATTGTTCACCATAGCCTTGAGTTGAGTGATTTTTCCAATCCAATGGACCTTTTTAGAATCAAACAAGTAATGGAAGATGAAGGGTTTGATTCTCATTTTCAAAACCCAGATGTTGAATACTATGGAAAAATTCTGGAAATTCCTTCTGTATCAAGGGACCCTAAGGTAATTTGCAAGTTTGTTCAATTACCTTGTGATGTTTGTCATATGAAAGGACTTTCTATACTGCCAAACATTTCTGAAGTTGAAGAGTCACCGAAATTAACTTTTGATGATGATTTACTGTCAAGAAAGTCCTTTCCAGATCCCTCTGTAATTGAAAAGTTTATTTCGAATATTGTAAATGCCCGAGGTAATTTTCAAGACCATGCAGTAATTGATAAAGAGAAAGAGTTATTAAATACTGAAGACCATGCAGTAATTGAGAAAGAGAAGGAGTTATTAAATGCCAAAGGGCTGCAAGTCTTTGGTCTTCCTTCTGCCGAGAGTGTATTTTCCAAGGAGCCTTTGCATGAAGTGGGGGAGGTTTTTAAGAATAAGGAGGATGCTGCATTTATTGATGAGATAGTAAATGACGGGGAGGTTTTTAAGAATAAGGAGGATGCTGCATTTATTGATGAGATAGTAAATGATATTTTAACTCAAGTTTCAAACATGGCTGATAAGTCTTTAATCGAGGGGCAATCTTTCAAATGTCCAGTAATTAATAATCCAAAGGCTTTTTCAGATGTGAACACGGTTCAGGATACTTTTAATTCCGATTTAATTGGAAATTATTCTTTGTCTTAATATTTGGACTCCGTTATTCCATCAAGTGTCAAAGAAGTGCATGATAATTTCTGTAAATCTTATTCCAAATATTATGTGCGAAAGAAAGGGCCAAGTGTGGAAGGTGATAACTTAAAGGTTAATGCTGATGCTTTGGAAGAAGTTGTCTCTAAGGTATTGGCTCCTCAAGAATCTATATTAAATCAGGATTATTCAAAGGTAGCAGACAAGTCAAATGATCTTGAAATCAGTATTGTAATAACGGGCCAGAAGGTGTGCTTTTCACAAGAGTTCTTTTTCCCTCTTCTAAAGCTAGTTTGGCGACAAAGGCATCATCACATTATGATATTGAAAATTCAGATGATGAGTCAGAGGTTAGTATGAGCAGTGAAGAGATTGATTTTCCTCCTTAGGAAAATCTTTTGAATGCTGATAGTTGTGATATTTTGGTAAACGATGATTTGAATTTGCTCTTTAAATCTCCATTAAAATCTAATGCTTCAAGCAAGAAGATTGTGGATGACTTTTAAGAATTTTAATTCCAACCGCTTCAGATAATTTAGATACTTTTTCTGCACTTATTAAAGCCAATATCAAAGAATTTCTGCCATCCTCAATGATTGAAGCATCTAAGCAGTAGTAGGATTGTATTTGCATCATTTAAAGGTCCTTCAAGAAGATTATTTCATGGAACACTAGAGGTTTGGGGGAAGTCTCCAAAAGGATAAAGCTGAAGAAATTTTTGCAAAATGTAAGTCCAGATATGGTTCTTATTCAAGAGACTAAGTTGACTTCTATTGACAGGAGGTTTGTTAGAACTCTCTGGAGTTCTAAGGAGGTAAATTGGGTGCATGTGGAATCTTTTTGTAGATCGGGTGGGATGTTAGTTATGTGGGATGAAAGTAGAGTCAATGTGGTTGAGGTGTTAAAAGGAGGATACTCTCTTTCGGTTAGAGCATGTTTCCAACAGAACAAAGTTTGCTGGATTTCGAACATATACGACCCTAATAATTACAGAGAAAGAAGACATCTATGGAGTGAATTGAGATCTGTTTTTTGTTATTGTGATGAGCCTTGGTGTGTGGGAGGTGATTTTAATGTGACAAGGCGGATCCACGAGTGCTTTCCTTGTAGTAGATACACTAAAGGTACGAGGAATTTTAATAAAATCATTGGAGAGATTGGTTTGATGGAGATCCCTTTATATAATGGCAAGTATACTTGGTCTTGGTTAGGCAATGATAGTAGTCGATCATCAATGGATAGATTTCTTGTTAATAAGGAGTGGGATGATCTTTTTGATAACTCAAGAGATTCAAGGCAGGTGCGTACAATTCCAGATCATTTTCCTATTCTGTTAGAAGCTGGAGGCTTTTCTTGGGGGCTTTCTCCTTTTCGTTTTTTGAATTCCTGGCTAAATCTGGGTGAATGTGTTGAGATTATGGAGAATTCCCTTGTTGAAGATCGATCTTATGGATGGGCTGGTTTTATGCTTGCTGCCAAGCTTCGAAATTTGAAATCAGCAATCAAAGTTTGGTATAACAAATATGAAACAATAAAGAAGAGGAGTGAAAAACAGATGTTGAAAGAAATTGAGCAATTTGATTCCAAATCTGATTCTGTCCTTTTATCAGAGCAAGAATTAAGTACGAGGGCTTCAATTAAAGGGGTATTAATGGATCTGTACATGATGGAAGAAAGAAACTTGATTCAGAAATGTAAACTTTAG

mRNA sequence

ATGTGGGTTTCGTTCAAGCTGGAATCCAAGGGTTTCATGCCTTCGATCAAAGAAAAGAAGAAAATGAAGGGAATGGAGAAGAAAGAAGAAAAACCTCCACCTAGTTCTGGTTTTGAGTTTTCCTTGGATCCAGTTTTATCTCTTTTTGAGTATTCTTATGACGTTTTGTTGAAGTTACCTCTGAGCTTGTATTTTCGATCTGAAAGTCATGGAGGCAAACTTCGTTCTTCTTCAGGCTGGTTTTTGCGCTGTGTTGTGCCTATTTCAGGTGGTAGACAATTCATCCATGTGCCAATTGGAAATTCCAAAGTGGGTTGTTATTTATTCAAGGAGCTTGTGGTCAATTCCATTAGGAGTTTTATGGTTTCTAATGCTCCAGTAACTTCTTGGGAGGAACCTCCTATGAGTTATGCTGAAACTCTCAAGATTCCCTTGAAGTCATTAGTACTAGGTTCTGGGGCTGTTGGTGTATCTAAGAATTCTACAGTTCTTCGAAATCGTAAGGTTTCTTACTGGATTAGAAAAAATCAGGGGGTCTTGAATGTTAATTTTGCAGATTTTTGGGTGGTGTCCAGATTATTTGCCCACAATAGTTGGAAAGAAATTATTGAGGTTTTGGAATTTCATTTCAAATCAAAGATTTCGATCAATCCGCTTTTTGCAGATAAAGCATTGCTCAAATTTGAAGACGATAAAGTTGTTAGTTCATTAGATTCGGTTGGGAAATGGAAGGTCTTTGATTATTGGTGTAGACAATCTTTTGAAGCAATTGGAGAATATTTTGGGGGTTTAGTGAACATTTCAAGTGAAACTCTTAACATGACTATTGTTTCGGAAGCTAGAATTCAAGTTAAGACAAACTTATGTGGTTTTATGCCGGCTACTATTGAACTTAAAGATAGTTACAGAGGGAATATTTATCTTCATTTTGGAGATGTGTCTATTCTAGATTCTCCAAATATTGTTCACCATAGCCTTGAGTTGAGTGATTTTTCCAATCCAATGGACCTTTTTAGAATCAAACAAGTAATGGAAGATGAAGGGTTTGATTCTCATTTTCAAAACCCAGATGTTGAATACTATGGAAAAATTCTGGAAATTCCTTCTGTATCAAGGGACCCTAAGGTAATTTGCAAGTTTGTTCAATTACCTTGTGATGTTTGTCATATGAAAGGACTTTCTATACTGCCAAACATTTCTGAAGTTGAAGAGTCACCGAAATTAACTTTTGATGATGATTTACTGTCAAGAAAGTCCTTTCCAGATCCCTCTGTAATTGAAAAGTTTATTTCGAATATTGTAAATGCCCGAGGTAATTTTCAAGACCATGCAGTAATTGATAAAGAGAAAGAGTTATTAAATACTGAAGACCATGCAGTAATTGAGAAAGAGAAGGAGTTATTAAATGCCAAAGGGCTGCAAGTCTTTGGTCTTCCTTCTGCCGAGAGTGTATTTTCCAAGGAGCCTTTGCATGAAGTGGGGGAGGTTTTTAAGAATAAGGAGGATGCTGCATTTATTGATGAGATAGTAAATGACGGGGAGGTTTTTAAGAATAAGGAGGATGCTGCATTTATTGATGAGATAGTAAATGATATTTTAACTCAAGTTTCAAACATGGCTGATAAGTCTTTAATCGAGGGGCAATCTTTCAAATGTCCAAAAGGGCCAAGTGTGGAAGGTGATAACTTAAAGGTTAATGCTGATGCTTTGGAAGAAGTTGTCTCTAAGGTATTGGCTCCTCAAGAATCTATATTAAATCAGGATTATTCAAAGGTAGCAGACAAGTCAAATGATCTTGAAATCAGTATTGTAATAACGGGCCAGAAGATGATGAGTCAGAGGTCCTTCAAGAAGATTATTTCATGGAACACTAGAGGTTTGGGGGAAGTCTCCAAAAGGATAAAGCTGAAGAAATTTTTGCAAAATGTAAGTCCAGATATGGTTCTTATTCAAGAGACTAAGTTGACTTCTATTGACAGGAGGTTTGTTAGAACTCTCTGGAGTTCTAAGGAGGTAAATTGGGTGCATGTGGAATCTTTTTGTAGATCGGGTGGGATGTTAGTTATGTGGGATGAAAGTAGAGTCAATGTGGTTGAGGTGTTAAAAGGAGGATACTCTCTTTCGGTTAGAGCATGTTTCCAACAGAACAAAGTTTGCTGGATTTCGAACATATACGACCCTAATAATTACAGAGAAAGAAGACATCTATGGAGTGAATTGAGATCTGTTTTTTGTTATTGTGATGAGCCTTGGTGTGTGGGAGGTGATTTTAATGTGACAAGGCGGATCCACGAGTGCTTTCCTTGTAGTAGATACACTAAAGGTACGAGGAATTTTAATAAAATCATTGGAGAGATTGGTTTGATGGAGATCCCTTTATATAATGGCAAGTATACTTGGTCTTGGTTAGGCAATGATAGTAGTCGATCATCAATGGATAGATTTCTTGTTAATAAGGAGTGGGATGATCTTTTTGATAACTCAAGAGATTCAAGGCAGGTGCGTACAATTCCAGATCATTTTCCTATTCTGTTAGAAGCTGGAGGCTTTTCTTGGGGGCTTTCTCCTTTTCGTTTTTTGAATTCCTGGCTAAATCTGGGTGAATGTGTTGAGATTATGGAGAATTCCCTTGTTGAAGATCGATCTTATGGATGGGCTGGTTTTATGCTTGCTGCCAAGCTTCGAAATTTGAAATCAGCAATCAAAGTTTGGTATAACAAATATGAAACAATAAAGAAGAGGAGTGAAAAACAGATGTTGAAAGAAATTGAGCAATTTGATTCCAAATCTGATTCTGTCCTTTTATCAGAGCAAGAATTAAGTACGAGGGCTTCAATTAAAGGGGTATTAATGGATCTGTACATGATGGAAGAAAGAAACTTGATTCAGAAATGTAAACTTTAG

Coding sequence (CDS)

ATGTGGGTTTCGTTCAAGCTGGAATCCAAGGGTTTCATGCCTTCGATCAAAGAAAAGAAGAAAATGAAGGGAATGGAGAAGAAAGAAGAAAAACCTCCACCTAGTTCTGGTTTTGAGTTTTCCTTGGATCCAGTTTTATCTCTTTTTGAGTATTCTTATGACGTTTTGTTGAAGTTACCTCTGAGCTTGTATTTTCGATCTGAAAGTCATGGAGGCAAACTTCGTTCTTCTTCAGGCTGGTTTTTGCGCTGTGTTGTGCCTATTTCAGGTGGTAGACAATTCATCCATGTGCCAATTGGAAATTCCAAAGTGGGTTGTTATTTATTCAAGGAGCTTGTGGTCAATTCCATTAGGAGTTTTATGGTTTCTAATGCTCCAGTAACTTCTTGGGAGGAACCTCCTATGAGTTATGCTGAAACTCTCAAGATTCCCTTGAAGTCATTAGTACTAGGTTCTGGGGCTGTTGGTGTATCTAAGAATTCTACAGTTCTTCGAAATCGTAAGGTTTCTTACTGGATTAGAAAAAATCAGGGGGTCTTGAATGTTAATTTTGCAGATTTTTGGGTGGTGTCCAGATTATTTGCCCACAATAGTTGGAAAGAAATTATTGAGGTTTTGGAATTTCATTTCAAATCAAAGATTTCGATCAATCCGCTTTTTGCAGATAAAGCATTGCTCAAATTTGAAGACGATAAAGTTGTTAGTTCATTAGATTCGGTTGGGAAATGGAAGGTCTTTGATTATTGGTGTAGACAATCTTTTGAAGCAATTGGAGAATATTTTGGGGGTTTAGTGAACATTTCAAGTGAAACTCTTAACATGACTATTGTTTCGGAAGCTAGAATTCAAGTTAAGACAAACTTATGTGGTTTTATGCCGGCTACTATTGAACTTAAAGATAGTTACAGAGGGAATATTTATCTTCATTTTGGAGATGTGTCTATTCTAGATTCTCCAAATATTGTTCACCATAGCCTTGAGTTGAGTGATTTTTCCAATCCAATGGACCTTTTTAGAATCAAACAAGTAATGGAAGATGAAGGGTTTGATTCTCATTTTCAAAACCCAGATGTTGAATACTATGGAAAAATTCTGGAAATTCCTTCTGTATCAAGGGACCCTAAGGTAATTTGCAAGTTTGTTCAATTACCTTGTGATGTTTGTCATATGAAAGGACTTTCTATACTGCCAAACATTTCTGAAGTTGAAGAGTCACCGAAATTAACTTTTGATGATGATTTACTGTCAAGAAAGTCCTTTCCAGATCCCTCTGTAATTGAAAAGTTTATTTCGAATATTGTAAATGCCCGAGGTAATTTTCAAGACCATGCAGTAATTGATAAAGAGAAAGAGTTATTAAATACTGAAGACCATGCAGTAATTGAGAAAGAGAAGGAGTTATTAAATGCCAAAGGGCTGCAAGTCTTTGGTCTTCCTTCTGCCGAGAGTGTATTTTCCAAGGAGCCTTTGCATGAAGTGGGGGAGGTTTTTAAGAATAAGGAGGATGCTGCATTTATTGATGAGATAGTAAATGACGGGGAGGTTTTTAAGAATAAGGAGGATGCTGCATTTATTGATGAGATAGTAAATGATATTTTAACTCAAGTTTCAAACATGGCTGATAAGTCTTTAATCGAGGGGCAATCTTTCAAATGTCCAAAAGGGCCAAGTGTGGAAGGTGATAACTTAAAGGTTAATGCTGATGCTTTGGAAGAAGTTGTCTCTAAGGTATTGGCTCCTCAAGAATCTATATTAAATCAGGATTATTCAAAGGTAGCAGACAAGTCAAATGATCTTGAAATCAGTATTGTAATAACGGGCCAGAAGATGATGAGTCAGAGGTCCTTCAAGAAGATTATTTCATGGAACACTAGAGGTTTGGGGGAAGTCTCCAAAAGGATAAAGCTGAAGAAATTTTTGCAAAATGTAAGTCCAGATATGGTTCTTATTCAAGAGACTAAGTTGACTTCTATTGACAGGAGGTTTGTTAGAACTCTCTGGAGTTCTAAGGAGGTAAATTGGGTGCATGTGGAATCTTTTTGTAGATCGGGTGGGATGTTAGTTATGTGGGATGAAAGTAGAGTCAATGTGGTTGAGGTGTTAAAAGGAGGATACTCTCTTTCGGTTAGAGCATGTTTCCAACAGAACAAAGTTTGCTGGATTTCGAACATATACGACCCTAATAATTACAGAGAAAGAAGACATCTATGGAGTGAATTGAGATCTGTTTTTTGTTATTGTGATGAGCCTTGGTGTGTGGGAGGTGATTTTAATGTGACAAGGCGGATCCACGAGTGCTTTCCTTGTAGTAGATACACTAAAGGTACGAGGAATTTTAATAAAATCATTGGAGAGATTGGTTTGATGGAGATCCCTTTATATAATGGCAAGTATACTTGGTCTTGGTTAGGCAATGATAGTAGTCGATCATCAATGGATAGATTTCTTGTTAATAAGGAGTGGGATGATCTTTTTGATAACTCAAGAGATTCAAGGCAGGTGCGTACAATTCCAGATCATTTTCCTATTCTGTTAGAAGCTGGAGGCTTTTCTTGGGGGCTTTCTCCTTTTCGTTTTTTGAATTCCTGGCTAAATCTGGGTGAATGTGTTGAGATTATGGAGAATTCCCTTGTTGAAGATCGATCTTATGGATGGGCTGGTTTTATGCTTGCTGCCAAGCTTCGAAATTTGAAATCAGCAATCAAAGTTTGGTATAACAAATATGAAACAATAAAGAAGAGGAGTGAAAAACAGATGTTGAAAGAAATTGAGCAATTTGATTCCAAATCTGATTCTGTCCTTTTATCAGAGCAAGAATTAAGTACGAGGGCTTCAATTAAAGGGGTATTAATGGATCTGTACATGATGGAAGAAAGAAACTTGATTCAGAAATGTAAACTTTAG

Protein sequence

MWVSFKLESKGFMPSIKEKKKMKGMEKKEEKPPPSSGFEFSLDPVLSLFEYSYDVLLKLPLSLYFRSESHGGKLRSSSGWFLRCVVPISGGRQFIHVPIGNSKVGCYLFKELVVNSIRSFMVSNAPVTSWEEPPMSYAETLKIPLKSLVLGSGAVGVSKNSTVLRNRKVSYWIRKNQGVLNVNFADFWVVSRLFAHNSWKEIIEVLEFHFKSKISINPLFADKALLKFEDDKVVSSLDSVGKWKVFDYWCRQSFEAIGEYFGGLVNISSETLNMTIVSEARIQVKTNLCGFMPATIELKDSYRGNIYLHFGDVSILDSPNIVHHSLELSDFSNPMDLFRIKQVMEDEGFDSHFQNPDVEYYGKILEIPSVSRDPKVICKFVQLPCDVCHMKGLSILPNISEVEESPKLTFDDDLLSRKSFPDPSVIEKFISNIVNARGNFQDHAVIDKEKELLNTEDHAVIEKEKELLNAKGLQVFGLPSAESVFSKEPLHEVGEVFKNKEDAAFIDEIVNDGEVFKNKEDAAFIDEIVNDILTQVSNMADKSLIEGQSFKCPKGPSVEGDNLKVNADALEEVVSKVLAPQESILNQDYSKVADKSNDLEISIVITGQKMMSQRSFKKIISWNTRGLGEVSKRIKLKKFLQNVSPDMVLIQETKLTSIDRRFVRTLWSSKEVNWVHVESFCRSGGMLVMWDESRVNVVEVLKGGYSLSVRACFQQNKVCWISNIYDPNNYRERRHLWSELRSVFCYCDEPWCVGGDFNVTRRIHECFPCSRYTKGTRNFNKIIGEIGLMEIPLYNGKYTWSWLGNDSSRSSMDRFLVNKEWDDLFDNSRDSRQVRTIPDHFPILLEAGGFSWGLSPFRFLNSWLNLGECVEIMENSLVEDRSYGWAGFMLAAKLRNLKSAIKVWYNKYETIKKRSEKQMLKEIEQFDSKSDSVLLSEQELSTRASIKGVLMDLYMMEERNLIQKCKL

Homology

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BLAST of Spg038917 vs. NCBI nr
Match: TYJ98683.1 (hypothetical protein E5676_scaffold429G00120 [Cucumis melo var. makuwa])

HSP 1 Score: 267.3 bits (682), Expect = 5.1e-67
Identity = 120/249 (48.19%), Postives = 159/249 (63.86%), Query Frame = 0


Query: 643 VSPD-MVLIQETKLTSIDRRFVRTLWSSKEVNWVHVESFCRSGGMLVMWDESRVNVVEVL 702
           + PD +V+    +   ID   +++LWSSK++ W  VESF R GG+L MWD S++ VVE L
Sbjct: 66  LDPDHLVICYRNQGQEIDIALIKSLWSSKDIGWELVESFGRFGGILTMWDMSKIKVVETL 125

Query: 703 KGGYSLSVRACFQQNKVCWISNIYDPNNYRERRHLWSELRSVFCYCDEPWCVGGDFNVTR 762
           KGGYSLS+ +     K CWI+N+Y P +Y ERR +W  L S+  YC   WC+GG  N+TR
Sbjct: 126 KGGYSLSINSITSCKKSCWITNVYGPYDYEERRFVWLVLVSLSGYCTGAWCIGGKCNITR 185

Query: 763 RIHECFPCSRYTKGTRNFNKIIGEIGLMEIPLYNGKYTWSWLGNDSSRSSMDRFLVNKEW 822
             HECFP  + T+G R FN  I  + + E+PL NG+ TWS  G+  SRS +D F ++KEW
Sbjct: 186 WAHECFPLEKQTRGMRQFNNPIDSLNIWELPLQNGRCTWSREGSSISRSLLDPFFIDKEW 245

Query: 823 DDLFDNSRDSRQVRTIPDHFPILLEAGGFSWGLSPFRFLNSWLNLGECVEIMENSLVEDR 882
           D++ +NSR  R+  TI DHFP+LLEAG   WG SPFRF NSWL   EC  I++       
Sbjct: 246 DEISENSRVGRKAHTISDHFPLLLEAGSIKWGPSPFRFSNSWLPFSECNRIIKEVWNITS 305

Query: 883 SYGWAGFML 891
              WAGF+L
Sbjct: 306 ITDWAGFVL 314

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BLAST of Spg038917 vs. NCBI nr
Match: RVX13544.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])

HSP 1 Score: 245.4 bits (625), Expect = 2.1e-60
Identity = 132/362 (36.46%), Postives = 197/362 (54.42%), Query Frame = 0


Query: 607 GQKMMSQRSFKKIISWNTRGLGEVSKRIKLKKFLQNVSPDMVLIQETKLTSIDRRFVRTL 666
           G ++   +   KIISWNTRGLG   KR  +K FL++  PD+V+ QETK    DRRFV ++
Sbjct: 317 GSEIRVTKFHMKIISWNTRGLGSKKKRRVVKDFLRSEKPDVVMFQETKKEECDRRFVGSV 376

Query: 667 WSSKEVNWVHVESFCRSGGMLVMWDESRVNVVEVLKGGYSLSVRACFQQNKVCWISNIYD 726
           W+++  +W  + +   SGG+L++WD  +++  EV+ G +S+S++      +  W+S +Y 
Sbjct: 377 WTARNKDWATLPACGASGGILIIWDTKKLSREEVMLGSFSVSIKFTLNGCESLWLSAVYG 436

Query: 727 PNNYRERRHLWSELRSVFCYCDEPWCVGGDFNVTRRIHECFPCSRYTKGTRNFNKIIGEI 786
           PNN   R+ LW EL  +       WCVGGDFNV RR  E    SR T   ++F+  I + 
Sbjct: 437 PNNSALRKDLWVELSDIAGLASPRWCVGGDFNVIRRSSEKLGGSRLTPSMKDFDDFISDC 496

Query: 787 GLMEIPLYNGKYTWSWLGNDSSRSSMDRFLVNKEWDDLFDNSRDSRQVRTIPDHFPILLE 846
            L+++PL +  +TWS +  +     +DRFL + EW+  F  S      R   DH+PI+LE
Sbjct: 497 ELIDLPLRSASFTWSNMQVNPVCKRLDRFLYSNEWEQTFPQSIQGVLPRWTSDHWPIVLE 556

Query: 847 AGGFSWGLSPFRFLNSWLNLGECVEIMENSLVEDRSYGWAGFMLAAKLRNLKSAIKVWYN 906
              F WG +PFRF N WL      E       E +  GW G     KL+ +K+ +KVW  
Sbjct: 557 TNPFKWGPTPFRFENMWLQHPSFKENFGRWWREFQGNGWEGHKFMRKLQFVKAKLKVWNK 616

Query: 907 -KYETIKKRSEKQMLKEIEQFDSKSDSVLLSEQELSTRASIKGVLMDLYMMEERNLIQKC 966
             +  + KR E  +L  +  FDS      LS + L+ RA  KG L +L + EE +  QK 
Sbjct: 617 ASFGELSKRKE-DILSALVNFDSLEQEGGLSHELLAQRAIKKGELEELILREEIHWRQKA 676

Query: 967 KL 968
           ++
Sbjct: 677 RV 677

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BLAST of Spg038917 vs. NCBI nr
Match: RVW70235.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])

HSP 1 Score: 245.4 bits (625), Expect = 2.1e-60
Identity = 132/362 (36.46%), Postives = 197/362 (54.42%), Query Frame = 0


Query: 607  GQKMMSQRSFKKIISWNTRGLGEVSKRIKLKKFLQNVSPDMVLIQETKLTSIDRRFVRTL 666
            G ++   +   KIISWNTRGLG   KR  +K FL++  PD+V+ QETK    DRRFV ++
Sbjct: 802  GSEIRVTKFHMKIISWNTRGLGSKKKRRVVKDFLRSEKPDVVMFQETKKEECDRRFVGSV 861

Query: 667  WSSKEVNWVHVESFCRSGGMLVMWDESRVNVVEVLKGGYSLSVRACFQQNKVCWISNIYD 726
            W+++  +W  + +   SGG+L++WD  +++  EV+ G +S+S++      +  W+S +Y 
Sbjct: 862  WTARNKDWAALPACGASGGILIIWDTKKLSREEVMLGSFSVSIKFTLNGCESLWLSAVYG 921

Query: 727  PNNYRERRHLWSELRSVFCYCDEPWCVGGDFNVTRRIHECFPCSRYTKGTRNFNKIIGEI 786
            PNN   R+ LW EL  +       WCVGGDFNV RR  E    SR T   ++F+  I + 
Sbjct: 922  PNNSALRKDLWVELSDIAGLASPRWCVGGDFNVIRRSSEKLGGSRLTPSMKDFDDFISDC 981

Query: 787  GLMEIPLYNGKYTWSWLGNDSSRSSMDRFLVNKEWDDLFDNSRDSRQVRTIPDHFPILLE 846
             L+++PL +  +TWS +  +     +DRFL + EW+  F  S      R   DH+PI+LE
Sbjct: 982  ELIDLPLRSASFTWSNMQVNPVCKRLDRFLYSNEWEQTFPQSIQGVLPRWTSDHWPIVLE 1041

Query: 847  AGGFSWGLSPFRFLNSWLNLGECVEIMENSLVEDRSYGWAGFMLAAKLRNLKSAIKVWYN 906
               F WG +PFRF N WL      E       E +  GW G     KL+ +K+ +KVW  
Sbjct: 1042 TNPFKWGPTPFRFENMWLQHPSFKENFGRWWREFQGNGWEGHKFMRKLQFVKAKLKVWNK 1101

Query: 907  -KYETIKKRSEKQMLKEIEQFDSKSDSVLLSEQELSTRASIKGVLMDLYMMEERNLIQKC 966
              +  + KR E  +L  +  FDS      LS + L+ RA  KG L +L + EE +  QK 
Sbjct: 1102 ASFGELSKRKE-DILSALVNFDSLEQEGGLSHELLAQRAIKKGELEELILREEIHWRQKA 1161

Query: 967  KL 968
            ++
Sbjct: 1162 RV 1162

[Close]

BLAST of Spg038917 vs. NCBI nr
Match: CAN68838.1 (hypothetical protein VITISV_030956 [Vitis vinifera])

HSP 1 Score: 245.4 bits (625), Expect = 2.1e-60
Identity = 132/362 (36.46%), Postives = 197/362 (54.42%), Query Frame = 0


Query: 607  GQKMMSQRSFKKIISWNTRGLGEVSKRIKLKKFLQNVSPDMVLIQETKLTSIDRRFVRTL 666
            G ++   +   KIISWNTRGLG   KR  +K FL++  PD+V+ QETK    DRRFV ++
Sbjct: 820  GSEIRVTKFHMKIISWNTRGLGSKKKRRVVKDFLRSEKPDVVMFQETKKEECDRRFVGSV 879

Query: 667  WSSKEVNWVHVESFCRSGGMLVMWDESRVNVVEVLKGGYSLSVRACFQQNKVCWISNIYD 726
            W+++  +W  + +   SGG+L++WD  +++  EV+ G +S+S++      +  W+S +Y 
Sbjct: 880  WTARNKDWAALPACGASGGILIIWDTKKLSREEVMLGSFSVSIKFTLNGCESLWLSAVYG 939

Query: 727  PNNYRERRHLWSELRSVFCYCDEPWCVGGDFNVTRRIHECFPCSRYTKGTRNFNKIIGEI 786
            PNN   R+ LW EL  +       WCVGGDFNV RR  E    SR T   ++F+  I + 
Sbjct: 940  PNNSALRKDLWVELSDIAGLASPRWCVGGDFNVIRRSSEKLGGSRLTPSMKDFDDFISDC 999

Query: 787  GLMEIPLYNGKYTWSWLGNDSSRSSMDRFLVNKEWDDLFDNSRDSRQVRTIPDHFPILLE 846
             L+++PL +  +TWS +  +     +DRFL + EW+  F  S      R   DH+PI+LE
Sbjct: 1000 ELIDLPLRSASFTWSNMQVNPVCKRLDRFLYSNEWEQTFPQSIQGVLPRWTSDHWPIVLE 1059

Query: 847  AGGFSWGLSPFRFLNSWLNLGECVEIMENSLVEDRSYGWAGFMLAAKLRNLKSAIKVWYN 906
               F WG +PFRF N WL      E       E +  GW G     KL+ +K+ +KVW  
Sbjct: 1060 TNPFKWGPTPFRFENMWLQHPSFKENFGRWWREFQGNGWEGHKFMRKLQFVKAKLKVWNK 1119

Query: 907  -KYETIKKRSEKQMLKEIEQFDSKSDSVLLSEQELSTRASIKGVLMDLYMMEERNLIQKC 966
              +  + KR E  +L  +  FDS      LS + L+ RA  KG L +L + EE +  QK 
Sbjct: 1120 ASFGELSKRKE-DILSALVNFDSLEQEGGLSHELLAQRAIKKGELEELILREEIHWRQKA 1179

Query: 967  KL 968
            ++
Sbjct: 1180 RV 1180

[Close]

BLAST of Spg038917 vs. NCBI nr
Match: CAN68165.1 (hypothetical protein VITISV_008538 [Vitis vinifera])

HSP 1 Score: 245.0 bits (624), Expect = 2.7e-60
Identity = 136/358 (37.99%), Postives = 196/358 (54.75%), Query Frame = 0


Query: 611 MSQRSFKKIISWNTRGLGEVSKRIKLKKFLQNVSPDMVLIQETKLTSIDRRFVRTLWSSK 670
           +S R   KIISWNTRGLG   KR  +K FL++  PD+V+IQETK    DRRFV ++W+++
Sbjct: 106 ISPRKMAKIISWNTRGLGSRKKRRVVKDFLRSEKPDIVMIQETKKAECDRRFVGSVWTAR 165

Query: 671 EVNWVHVESFCRSGGMLVMWDESRVNVVEVLKGGYSLSVRACFQQNKVCWISNIYDPNNY 730
              W  + +   SGG+LV+WD  +++  EV+ G +S+SV+     ++  W+S +Y PN+ 
Sbjct: 166 NKEWAVLPACGASGGILVIWDSKKLHSEEVVLGSFSVSVKFAVDGSEQFWJSAVYGPNST 225

Query: 731 RERRHLWSELRSVFCYCDEPWCVGGDFNVTRRIHECFPCSRYTKGTRNFNKIIGEIGLME 790
             R+  W EL  +F      WCVGGDFNV RR  E     R T   ++ +  I E  L++
Sbjct: 226 ALRKDFWVELSDIFGLSSPCWCVGGDFNVIRRCSEKLGGGRLTPSMKDLDDFIRENELID 285

Query: 791 IPLYNGKYTWSWLGNDSSRSSMDRFLVNKEWDDLFDNSRDSRQVRTIPDHFPILLEAGGF 850
            PL +  +TWS +        +DRFL + EW+ LF  S      R   DH+PI+LE   F
Sbjct: 286 PPLRSASFTWSNMQEHPVCKRLDRFLYSNEWEQLFPQSLQEVLPRWTSDHWPIVLETNPF 345

Query: 851 SWGLSPFRFLNSWLNLGECVEIMENSLVEDRSYGWAGFMLAAKLRNLKSAIKVW-YNKYE 910
            WG +PFRF N WL+     E       E +  GW G     KL+ LK+ +K W  N + 
Sbjct: 346 KWGPTPFRFENMWLHHPSFKECFGRWWREFQGDGWEGHKFMRKLQFLKAKLKEWNKNAFG 405

Query: 911 TIKKRSEKQMLKEIEQFDSKSDSVLLSEQELSTRASIKGVLMDLYMMEERNLIQKCKL 968
            + +R +K +L +I  FDS      LS + L  RA  KG L +L + EE +  QK ++
Sbjct: 406 DLIER-KKCILLDIANFDSMEQEGGLSPELLIQRAVRKGELEELILREEIHWRQKARV 462

[Close]

BLAST of Spg038917 vs. ExPASy Swiss-Prot
Match: P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 6.8e-06
Identity = 78/368 (21.20%), Postives = 151/368 (41.03%), Query Frame = 0


Query: 619 IISWNTRGLGEVSKRIKLKKFLQNVSPDMVLIQETKLTSIDRRFVRTL-WSSKEVNWVHV 678
           I S N  GL    KR +L  ++Q + PD+  IQE+ LT  D+  ++   WSS        
Sbjct: 9   IFSINVNGLNCPLKRHRLADWIQKLKPDICCIQESHLTLKDKYRLKVKGWSS----IFQA 68

Query: 679 ESFCRSGGMLVMWDES---RVNVVEVLKGGYSLSVRACFQQNKVCWISNIYDPNNYRERR 738
               +  G+ +++ ++   +   +   K G+ + V+   Q +++  I NIY P N+   +
Sbjct: 69  NGKQKKAGIAILFADAIGFKPTKIRKDKDGHFIFVKGNTQYDEIS-IINIYAP-NHNAPQ 128

Query: 739 HLWSELRSVFCYCDEPWCVGGDFNVTRRIHECFPCSRYTKGTRNFNKIIGEIGLMEI--P 798
            +   L  +         V GDFN    + +     + +K   + N  I  + L +I   
Sbjct: 129 FIRETLTDMSNLISSTSIVVGDFNTPLAVLDRSSKKKLSKEILDLNSTIQHLDLTDIYRT 188

Query: 799 LYNGKYTWSWLGN-DSSRSSMDRFLVNKEWDDLFDNSRDSRQVRTIP----DHFPILLEA 858
            +  K  +++  +   + S +D  L +K       N    +++  IP    DH  I +E 
Sbjct: 189 FHPNKTEYTFFSSAHGTYSKIDHILGHK------SNLSKFKKIEIIPCIFSDHHGIKVEL 248

Query: 859 GG--------FSWGLSPFRFLNSWL---NLGECVEIMENSLVEDRSYGWAGFMLAAKLRN 918
                      +W L+     ++W+      E  + +E +  +D +Y        A LR 
Sbjct: 249 NNNRNLHTHTKTWKLNNLMLKDTWVIDEIKKEITKFLEQNNNQDTNYQNLWDTAKAVLRG 308

Query: 919 LKSAIKVWYNKYETIKKRSEKQMLKEIEQFDSKSDSVLLSEQELSTRASIKGVLMDLYMM 965
              A++ +  K E  +  +    LK++E+ +        S  + S R  I  +  +L  +
Sbjct: 309 KFIALQAFLKKTEREEVNNLMGHLKQLEKEEH-------SNPKPSRRKEITKIRAELNEI 357

[Close]

BLAST of Spg038917 vs. ExPASy TrEMBL
Match: A0A5D3BHE3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold429G00120 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 2.5e-67
Identity = 120/249 (48.19%), Postives = 159/249 (63.86%), Query Frame = 0


Query: 643 VSPD-MVLIQETKLTSIDRRFVRTLWSSKEVNWVHVESFCRSGGMLVMWDESRVNVVEVL 702
           + PD +V+    +   ID   +++LWSSK++ W  VESF R GG+L MWD S++ VVE L
Sbjct: 66  LDPDHLVICYRNQGQEIDIALIKSLWSSKDIGWELVESFGRFGGILTMWDMSKIKVVETL 125

Query: 703 KGGYSLSVRACFQQNKVCWISNIYDPNNYRERRHLWSELRSVFCYCDEPWCVGGDFNVTR 762
           KGGYSLS+ +     K CWI+N+Y P +Y ERR +W  L S+  YC   WC+GG  N+TR
Sbjct: 126 KGGYSLSINSITSCKKSCWITNVYGPYDYEERRFVWLVLVSLSGYCTGAWCIGGKCNITR 185

Query: 763 RIHECFPCSRYTKGTRNFNKIIGEIGLMEIPLYNGKYTWSWLGNDSSRSSMDRFLVNKEW 822
             HECFP  + T+G R FN  I  + + E+PL NG+ TWS  G+  SRS +D F ++KEW
Sbjct: 186 WAHECFPLEKQTRGMRQFNNPIDSLNIWELPLQNGRCTWSREGSSISRSLLDPFFIDKEW 245

Query: 823 DDLFDNSRDSRQVRTIPDHFPILLEAGGFSWGLSPFRFLNSWLNLGECVEIMENSLVEDR 882
           D++ +NSR  R+  TI DHFP+LLEAG   WG SPFRF NSWL   EC  I++       
Sbjct: 246 DEISENSRVGRKAHTISDHFPLLLEAGSIKWGPSPFRFSNSWLPFSECNRIIKEVWNITS 305

Query: 883 SYGWAGFML 891
              WAGF+L
Sbjct: 306 ITDWAGFVL 314

[Close]

BLAST of Spg038917 vs. ExPASy TrEMBL
Match: A5CAA2 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_030956 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.0e-60
Identity = 132/362 (36.46%), Postives = 197/362 (54.42%), Query Frame = 0


Query: 607  GQKMMSQRSFKKIISWNTRGLGEVSKRIKLKKFLQNVSPDMVLIQETKLTSIDRRFVRTL 666
            G ++   +   KIISWNTRGLG   KR  +K FL++  PD+V+ QETK    DRRFV ++
Sbjct: 820  GSEIRVTKFHMKIISWNTRGLGSKKKRRVVKDFLRSEKPDVVMFQETKKEECDRRFVGSV 879

Query: 667  WSSKEVNWVHVESFCRSGGMLVMWDESRVNVVEVLKGGYSLSVRACFQQNKVCWISNIYD 726
            W+++  +W  + +   SGG+L++WD  +++  EV+ G +S+S++      +  W+S +Y 
Sbjct: 880  WTARNKDWAALPACGASGGILIIWDTKKLSREEVMLGSFSVSIKFTLNGCESLWLSAVYG 939

Query: 727  PNNYRERRHLWSELRSVFCYCDEPWCVGGDFNVTRRIHECFPCSRYTKGTRNFNKIIGEI 786
            PNN   R+ LW EL  +       WCVGGDFNV RR  E    SR T   ++F+  I + 
Sbjct: 940  PNNSALRKDLWVELSDIAGLASPRWCVGGDFNVIRRSSEKLGGSRLTPSMKDFDDFISDC 999

Query: 787  GLMEIPLYNGKYTWSWLGNDSSRSSMDRFLVNKEWDDLFDNSRDSRQVRTIPDHFPILLE 846
             L+++PL +  +TWS +  +     +DRFL + EW+  F  S      R   DH+PI+LE
Sbjct: 1000 ELIDLPLRSASFTWSNMQVNPVCKRLDRFLYSNEWEQTFPQSIQGVLPRWTSDHWPIVLE 1059

Query: 847  AGGFSWGLSPFRFLNSWLNLGECVEIMENSLVEDRSYGWAGFMLAAKLRNLKSAIKVWYN 906
               F WG +PFRF N WL      E       E +  GW G     KL+ +K+ +KVW  
Sbjct: 1060 TNPFKWGPTPFRFENMWLQHPSFKENFGRWWREFQGNGWEGHKFMRKLQFVKAKLKVWNK 1119

Query: 907  -KYETIKKRSEKQMLKEIEQFDSKSDSVLLSEQELSTRASIKGVLMDLYMMEERNLIQKC 966
              +  + KR E  +L  +  FDS      LS + L+ RA  KG L +L + EE +  QK 
Sbjct: 1120 ASFGELSKRKE-DILSALVNFDSLEQEGGLSHELLAQRAIKKGELEELILREEIHWRQKA 1179

Query: 967  KL 968
            ++
Sbjct: 1180 RV 1180

[Close]

BLAST of Spg038917 vs. ExPASy TrEMBL
Match: A0A438JX47 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=Pol_26 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.0e-60
Identity = 132/362 (36.46%), Postives = 197/362 (54.42%), Query Frame = 0


Query: 607 GQKMMSQRSFKKIISWNTRGLGEVSKRIKLKKFLQNVSPDMVLIQETKLTSIDRRFVRTL 666
           G ++   +   KIISWNTRGLG   KR  +K FL++  PD+V+ QETK    DRRFV ++
Sbjct: 317 GSEIRVTKFHMKIISWNTRGLGSKKKRRVVKDFLRSEKPDVVMFQETKKEECDRRFVGSV 376

Query: 667 WSSKEVNWVHVESFCRSGGMLVMWDESRVNVVEVLKGGYSLSVRACFQQNKVCWISNIYD 726
           W+++  +W  + +   SGG+L++WD  +++  EV+ G +S+S++      +  W+S +Y 
Sbjct: 377 WTARNKDWATLPACGASGGILIIWDTKKLSREEVMLGSFSVSIKFTLNGCESLWLSAVYG 436

Query: 727 PNNYRERRHLWSELRSVFCYCDEPWCVGGDFNVTRRIHECFPCSRYTKGTRNFNKIIGEI 786
           PNN   R+ LW EL  +       WCVGGDFNV RR  E    SR T   ++F+  I + 
Sbjct: 437 PNNSALRKDLWVELSDIAGLASPRWCVGGDFNVIRRSSEKLGGSRLTPSMKDFDDFISDC 496

Query: 787 GLMEIPLYNGKYTWSWLGNDSSRSSMDRFLVNKEWDDLFDNSRDSRQVRTIPDHFPILLE 846
            L+++PL +  +TWS +  +     +DRFL + EW+  F  S      R   DH+PI+LE
Sbjct: 497 ELIDLPLRSASFTWSNMQVNPVCKRLDRFLYSNEWEQTFPQSIQGVLPRWTSDHWPIVLE 556

Query: 847 AGGFSWGLSPFRFLNSWLNLGECVEIMENSLVEDRSYGWAGFMLAAKLRNLKSAIKVWYN 906
              F WG +PFRF N WL      E       E +  GW G     KL+ +K+ +KVW  
Sbjct: 557 TNPFKWGPTPFRFENMWLQHPSFKENFGRWWREFQGNGWEGHKFMRKLQFVKAKLKVWNK 616

Query: 907 -KYETIKKRSEKQMLKEIEQFDSKSDSVLLSEQELSTRASIKGVLMDLYMMEERNLIQKC 966
             +  + KR E  +L  +  FDS      LS + L+ RA  KG L +L + EE +  QK 
Sbjct: 617 ASFGELSKRKE-DILSALVNFDSLEQEGGLSHELLAQRAIKKGELEELILREEIHWRQKA 676

Query: 967 KL 968
           ++
Sbjct: 677 RV 677

[Close]

BLAST of Spg038917 vs. ExPASy TrEMBL
Match: A0A438GDE7 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=Pol_4 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.0e-60
Identity = 132/362 (36.46%), Postives = 197/362 (54.42%), Query Frame = 0


Query: 607  GQKMMSQRSFKKIISWNTRGLGEVSKRIKLKKFLQNVSPDMVLIQETKLTSIDRRFVRTL 666
            G ++   +   KIISWNTRGLG   KR  +K FL++  PD+V+ QETK    DRRFV ++
Sbjct: 802  GSEIRVTKFHMKIISWNTRGLGSKKKRRVVKDFLRSEKPDVVMFQETKKEECDRRFVGSV 861

Query: 667  WSSKEVNWVHVESFCRSGGMLVMWDESRVNVVEVLKGGYSLSVRACFQQNKVCWISNIYD 726
            W+++  +W  + +   SGG+L++WD  +++  EV+ G +S+S++      +  W+S +Y 
Sbjct: 862  WTARNKDWAALPACGASGGILIIWDTKKLSREEVMLGSFSVSIKFTLNGCESLWLSAVYG 921

Query: 727  PNNYRERRHLWSELRSVFCYCDEPWCVGGDFNVTRRIHECFPCSRYTKGTRNFNKIIGEI 786
            PNN   R+ LW EL  +       WCVGGDFNV RR  E    SR T   ++F+  I + 
Sbjct: 922  PNNSALRKDLWVELSDIAGLASPRWCVGGDFNVIRRSSEKLGGSRLTPSMKDFDDFISDC 981

Query: 787  GLMEIPLYNGKYTWSWLGNDSSRSSMDRFLVNKEWDDLFDNSRDSRQVRTIPDHFPILLE 846
             L+++PL +  +TWS +  +     +DRFL + EW+  F  S      R   DH+PI+LE
Sbjct: 982  ELIDLPLRSASFTWSNMQVNPVCKRLDRFLYSNEWEQTFPQSIQGVLPRWTSDHWPIVLE 1041

Query: 847  AGGFSWGLSPFRFLNSWLNLGECVEIMENSLVEDRSYGWAGFMLAAKLRNLKSAIKVWYN 906
               F WG +PFRF N WL      E       E +  GW G     KL+ +K+ +KVW  
Sbjct: 1042 TNPFKWGPTPFRFENMWLQHPSFKENFGRWWREFQGNGWEGHKFMRKLQFVKAKLKVWNK 1101

Query: 907  -KYETIKKRSEKQMLKEIEQFDSKSDSVLLSEQELSTRASIKGVLMDLYMMEERNLIQKC 966
              +  + KR E  +L  +  FDS      LS + L+ RA  KG L +L + EE +  QK 
Sbjct: 1102 ASFGELSKRKE-DILSALVNFDSLEQEGGLSHELLAQRAIKKGELEELILREEIHWRQKA 1161

Query: 967  KL 968
            ++
Sbjct: 1162 RV 1162

[Close]

BLAST of Spg038917 vs. ExPASy TrEMBL
Match: A5BPI6 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_008538 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 3.8e-60
Identity = 136/358 (37.99%), Postives = 195/358 (54.47%), Query Frame = 0


Query: 611 MSQRSFKKIISWNTRGLGEVSKRIKLKKFLQNVSPDMVLIQETKLTSIDRRFVRTLWSSK 670
           +S R   KIISWNTRGLG   KR  +K FL++  PD+V+IQETK    DRRFV ++W+++
Sbjct: 106 ISPRKMAKIISWNTRGLGSRKKRRVVKDFLRSEKPDIVMIQETKKAECDRRFVGSVWTAR 165

Query: 671 EVNWVHVESFCRSGGMLVMWDESRVNVVEVLKGGYSLSVRACFQQNKVCWISNIYDPNNY 730
              W  + +   SGG+LV+WD  +++  EV+ G +S+SV+     ++  W S +Y PN+ 
Sbjct: 166 NKEWAVLPACGASGGILVIWDSKKLHSEEVVLGSFSVSVKFAVDGSEQFWXSAVYGPNST 225

Query: 731 RERRHLWSELRSVFCYCDEPWCVGGDFNVTRRIHECFPCSRYTKGTRNFNKIIGEIGLME 790
             R+  W EL  +F      WCVGGDFNV RR  E     R T   ++ +  I E  L++
Sbjct: 226 ALRKDFWVELSDIFGLSSPCWCVGGDFNVIRRCSEKLGGGRLTPSMKDLDDFIRENELID 285

Query: 791 IPLYNGKYTWSWLGNDSSRSSMDRFLVNKEWDDLFDNSRDSRQVRTIPDHFPILLEAGGF 850
            PL +  +TWS +        +DRFL + EW+ LF  S      R   DH+PI+LE   F
Sbjct: 286 PPLRSASFTWSNMQEHPVCKRLDRFLYSNEWEQLFPQSLQEVLPRWTSDHWPIVLETNPF 345

Query: 851 SWGLSPFRFLNSWLNLGECVEIMENSLVEDRSYGWAGFMLAAKLRNLKSAIKVW-YNKYE 910
            WG +PFRF N WL+     E       E +  GW G     KL+ LK+ +K W  N + 
Sbjct: 346 KWGPTPFRFENMWLHHPSFKECFGRWWREFQGDGWEGHKFMRKLQFLKAKLKEWNKNAFG 405

Query: 911 TIKKRSEKQMLKEIEQFDSKSDSVLLSEQELSTRASIKGVLMDLYMMEERNLIQKCKL 968
            + +R +K +L +I  FDS      LS + L  RA  KG L +L + EE +  QK ++
Sbjct: 406 DLIER-KKCILLDIANFDSMEQEGGLSPELLIQRAVRKGELEELILREEIHWRQKARV 462

The following BLAST results are available for this feature:

BLAST of Spg038917 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ98683.1	5.1e-67	48.19	hypothetical protein E5676_scaffold429G00120 [Cucumis melo var. makuwa]	[more]
RVX13544.1	2.1e-60	36.46	LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]	[more]
RVW70235.1	2.1e-60	36.46	LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]	[more]
CAN68838.1	2.1e-60	36.46	hypothetical protein VITISV_030956 [Vitis vinifera]	[more]
CAN68165.1	2.7e-60	37.99	hypothetical protein VITISV_008538 [Vitis vinifera]	[more]

BLAST of Spg038917 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P08548	6.8e-06	21.20	LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1	[more]

BLAST of Spg038917 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BHE3	2.5e-67	48.19	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A5CAA2	1.0e-60	36.46	Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VI...	[more]
A0A438JX47	1.0e-60	36.46	LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=Pol_...	[more]
A0A438GDE7	1.0e-60	36.46	LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=Pol_...	[more]
A5BPI6	3.8e-60	37.99	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_008538 PE=4 SV=1	[more]

BLAST of Spg038917 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 612..846 e-value: 3.0E-30 score: 107.7
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 618..846
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..37
None	No IPR available	PANTHER	PTHR22748:SF11	DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE CHLOROPLASTIC	coord: 568..799
IPR004808	AP endonuclease 1	PANTHER	PTHR22748	AP ENDONUCLEASE	coord: 568..799
IPR020847	AP endonuclease 1, binding site	PROSITE	PS00726	AP_NUCLEASE_F1_1	coord: 645..654

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg038917.1	Spg038917.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0004518	nuclease activity