![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Spg038475 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTAATGGCTCCAAAACAGCCGAATACAGGCCTTTTTGTTGGCCTGAACAAGGGCCATATAGTCACCAAGAAGGAGCTGGCCCCTCGGCCCTCTGATCGCAAAGGAGTAAGTCAATCGACATATAGCTAGATATTTTAGAATTCTTTTCAATGATGGGAGGGAAGGCATTGGGTTTTCTCTGTTTTAATGTGTTCTTTCTTGGGCATGGTAGCTTTTTAGGAGCTTGAGGAATGAGCTAATTTTATTTCATTTGATTGGACCAATTCTGAGCTATAGTTGCATGCTTTTAGTTTTAACATCATTCTTAAAAGGTCTTGTTATATCTAGTTATCGATTACATCATCTTTTTGCAACATGTGAGATTGTTTTCTCAAATTTCTGTTTTCATACAAATTAATGTAGAAAACGAGTAAAAGGGTTCTCTTTGTCCGGAGCTTGATCCGCGAAGTTGCTGGTTTTGCCCCATATGAGAAGAGAATCACTGAGCTTCTAAAAGTTGGAAAAGACAAGCGTGCTCTGAAGGTAGCCAAGAGAAAGCTTGGAACTCACAAGAGAGCTAAGAAGAAGCGTGAGGAGATGTCTAACGTTCTAAGAAAGATGAGGTAATCTTTTAATATATCTTTTAAGGCAAATCTGTTTTTTTTTTTAGGGGCTGAATCATGTTCGGTTTGTGTGTGTTCACATTTGGATATGTTGTGAGTGGGAAGGTCATGAGGAAGTAGTATGATTAGCGTTCTGATTTCATTTCTGGATCTATTCTTTTTGCAGGGCTGGTGGAGGTGGTGAGAAGAAGAAGTGAGATCGACACTTCTACTCATTCATTCATAGTCTTACTCTCTGGCTACTCTTTTTTTGTTTCTTTACTCTTGAATTCGATAGAAAGAGCTCCTTGCGGTAGTCAATTTCAGTTTTGTCATCTTTCAACTTGTTTTACTAACATCCAATTTTGTTATGGCTCGGATCGTTTCAAGGATGCATTATCATTTCGTGAATTAATGGCCTGTCATGTCGTTTTCAGTTTATGATTGTACTTTTAGATATTTCCACAGGAAGTGCAAACATTTTCCTTCTTGCTACCCCCATGCACGGGCTTCAAATCCCTACGACTTTTTTATTGTGAACTTGAGATGTGTTGTGAAGTTCATATGATTATGTAATGATATGTGTTGCTAGGAAAAAACTGAAGTGCTTGCAAGGTCTAAATTAGAACTGCT GTAATGGCTCCAAAACAGCCGAATACAGGCCTTTTTGTTGGCCTGAACAAGGGCCATATAGTCACCAAGAAGGAGCTGGCCCCTCGGCCCTCTGATCGCAAAGGAAAAACGAGTAAAAGGGTTCTCTTTGTCCGGAGCTTGATCCGCGAAGTTGCTGGTTTTGCCCCATATGAGAAGAGAATCACTGAGCTTCTAAAAGTTGGAAAAGACAAGCGTGCTCTGAAGGTAGCCAAGAGAAAGCTTGGAACTCACAAGAGAGCTAAGAAGAAGCGTGAGGAGATGTCTAACGTTCTAAGAAAGATGAGGGCTGGTGGAGGTGGTGAGAAGAAGAAGTGA GTAATGGCTCCAAAACAGCCGAATACAGGCCTTTTTGTTGGCCTGAACAAGGGCCATATAGTCACCAAGAAGGAGCTGGCCCCTCGGCCCTCTGATCGCAAAGGAAAAACGAGTAAAAGGGTTCTCTTTGTCCGGAGCTTGATCCGCGAAGTTGCTGGTTTTGCCCCATATGAGAAGAGAATCACTGAGCTTCTAAAAGTTGGAAAAGACAAGCGTGCTCTGAAGGTAGCCAAGAGAAAGCTTGGAACTCACAAGAGAGCTAAGAAGAAGCGTGAGGAGATGTCTAACGTTCTAAGAAAGATGAGGGCTGGTGGAGGTGGTGAGAAGAAGAAGTGA VMAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGGGEKKK Homology
BLAST of Spg038475 vs. NCBI nr
Match: KAG6579388.1 (60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 208.8 bits (530), Expect = 2.5e-50 Identity = 110/111 (99.10%), Postives = 110/111 (99.10%), Query Frame = 0
BLAST of Spg038475 vs. NCBI nr
Match: XP_022922109.1 (60S ribosomal protein L36-2-like [Cucurbita moschata] >XP_022973014.1 60S ribosomal protein L36-2-like [Cucurbita maxima] >XP_023549776.1 60S ribosomal protein L36-2-like [Cucurbita pepo subsp. pepo] >KAG7016868.1 60S ribosomal protein L36-2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 207.2 bits (526), Expect = 7.2e-50 Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 0
BLAST of Spg038475 vs. NCBI nr
Match: KAF3946989.1 (hypothetical protein CMV_026816, partial [Castanea mollissima]) HSP 1 Score: 206.5 bits (524), Expect = 1.2e-49 Identity = 108/111 (97.30%), Postives = 110/111 (99.10%), Query Frame = 0
BLAST of Spg038475 vs. NCBI nr
Match: XP_010108352.1 (60S ribosomal protein L36-2 [Morus notabilis] >XP_024029217.1 60S ribosomal protein L36-2 [Morus notabilis] >EXC19143.1 60S ribosomal protein L36-2 [Morus notabilis]) HSP 1 Score: 206.1 bits (523), Expect = 1.6e-49 Identity = 108/110 (98.18%), Postives = 109/110 (99.09%), Query Frame = 0
BLAST of Spg038475 vs. NCBI nr
Match: KAG7013242.1 (60S ribosomal protein L36-2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 205.7 bits (522), Expect = 2.1e-49 Identity = 108/110 (98.18%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of Spg038475 vs. ExPASy Swiss-Prot
Match: Q9M352 (60S ribosomal protein L36-2 OS=Arabidopsis thaliana OX=3702 GN=RPL36B PE=3 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 4.4e-42 Identity = 91/112 (81.25%), Postives = 101/112 (90.18%), Query Frame = 0
BLAST of Spg038475 vs. ExPASy Swiss-Prot
Match: Q9LZ57 (60S ribosomal protein L36-3 OS=Arabidopsis thaliana OX=3702 GN=RPL36C PE=3 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 5.4e-40 Identity = 87/105 (82.86%), Postives = 98/105 (93.33%), Query Frame = 0
BLAST of Spg038475 vs. ExPASy Swiss-Prot
Match: O80929 (60S ribosomal protein L36-1 OS=Arabidopsis thaliana OX=3702 GN=RPL36A PE=3 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 9.1e-40 Identity = 87/105 (82.86%), Postives = 96/105 (91.43%), Query Frame = 0
BLAST of Spg038475 vs. ExPASy Swiss-Prot
Match: P52866 (60S ribosomal protein L36 OS=Daucus carota OX=4039 GN=RPL36 PE=3 SV=2) HSP 1 Score: 144.4 bits (363), Expect = 7.5e-34 Identity = 76/91 (83.52%), Postives = 81/91 (89.01%), Query Frame = 0
BLAST of Spg038475 vs. ExPASy Swiss-Prot
Match: Q9LRB8 (60S ribosomal protein L36 OS=Ulva compressa OX=63659 GN=RL36 PE=3 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 7.3e-29 Identity = 69/96 (71.88%), Postives = 79/96 (82.29%), Query Frame = 0
BLAST of Spg038475 vs. ExPASy TrEMBL
Match: A0A6J1IDA3 (60S ribosomal protein L36 OS=Cucurbita maxima OX=3661 GN=LOC111471531 PE=3 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 3.5e-50 Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 0
BLAST of Spg038475 vs. ExPASy TrEMBL
Match: A0A6J1E2F7 (60S ribosomal protein L36 OS=Cucurbita moschata OX=3662 GN=LOC111430179 PE=3 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 3.5e-50 Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 0
BLAST of Spg038475 vs. ExPASy TrEMBL
Match: W9SA20 (60S ribosomal protein L36 OS=Morus notabilis OX=981085 GN=L484_006508 PE=3 SV=1) HSP 1 Score: 206.1 bits (523), Expect = 7.8e-50 Identity = 108/110 (98.18%), Postives = 109/110 (99.09%), Query Frame = 0
BLAST of Spg038475 vs. ExPASy TrEMBL
Match: A0A6J1H2C5 (60S ribosomal protein L36 OS=Cucurbita moschata OX=3662 GN=LOC111459396 PE=3 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 1.0e-49 Identity = 108/110 (98.18%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of Spg038475 vs. ExPASy TrEMBL
Match: A0A6J1K6N3 (60S ribosomal protein L36 OS=Cucurbita maxima OX=3661 GN=LOC111491152 PE=3 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 1.0e-49 Identity = 108/110 (98.18%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of Spg038475 vs. TAIR 10
Match: AT3G53740.2 (Ribosomal protein L36e family protein ) HSP 1 Score: 171.8 bits (434), Expect = 3.1e-43 Identity = 91/112 (81.25%), Postives = 101/112 (90.18%), Query Frame = 0
BLAST of Spg038475 vs. TAIR 10
Match: AT3G53740.3 (Ribosomal protein L36e family protein ) HSP 1 Score: 171.8 bits (434), Expect = 3.1e-43 Identity = 91/112 (81.25%), Postives = 101/112 (90.18%), Query Frame = 0
BLAST of Spg038475 vs. TAIR 10
Match: AT3G53740.4 (Ribosomal protein L36e family protein ) HSP 1 Score: 171.8 bits (434), Expect = 3.1e-43 Identity = 91/112 (81.25%), Postives = 101/112 (90.18%), Query Frame = 0
BLAST of Spg038475 vs. TAIR 10
Match: AT5G02450.1 (Ribosomal protein L36e family protein ) HSP 1 Score: 164.9 bits (416), Expect = 3.8e-41 Identity = 87/105 (82.86%), Postives = 98/105 (93.33%), Query Frame = 0
BLAST of Spg038475 vs. TAIR 10
Match: AT2G37600.1 (Ribosomal protein L36e family protein ) HSP 1 Score: 164.1 bits (414), Expect = 6.5e-41 Identity = 87/105 (82.86%), Postives = 96/105 (91.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|