Spg038175 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg038175
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLOB domain-containing protein
Locationscaffold12: 42582856 .. 42584032 (-)
RNA-Seq ExpressionSpg038175
SyntenySpg038175
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCCTCGTGCGCCCCTTTCTACCTCTAATGGCTTCTTCCTCTTCTTCTTCTTCAAACTCTTCTTCTGTCTCAGCTGGCACTGGCTCTCCTTGCGGCGCATGCAAGTTTCTCCGCCGCAAATGTCTGCCTGATTGCATTTTTGCTCCTTACTTTTGCTCCGAACAAGGCCCTGCAAGGTTCGCCGCCATTCACAAGGTGTTTGGAGCTAGCAATGTCTCCAAGTTGCTCCTCCATGTCCCTGTTCCTGATCGCTGTGAGGCTGTTGTCACCATTGCCTATGAAGCTCAAGCTCGCATTCGTGACCCTGTTTATGGCTGTGTTGCTCATATTTTTGCTCTCCAACAACAGGTACCTATACTTCCCAATTATTGGATGGTCTTACAGCTCGTTCTCGATTAATATTGATAATCACTTTTCGGGTCGGGTTGGTTTTTTAACCTACTGTTGAGAAAGTGGAAATGGTTTGAGGATATGAATAAAAGATTGATTTTTTTCGTAACCCGTTTGAGTTTTTTGGGTTTTGGATTTAGTAATGATATAGTCCGGAGCAAAGCTAGAAATTTGTATAGAGAGGTGCAAAATTTAGGGGACAATTGTCTTCTTTCTTTCTTCTTTCTTTGCTGTGCTCGTGTCGAAATTACGAAATTTGAGTCTTGAAGTTAAAAGAGAGGATCTTTAAAATGGGGTTTTTTTGTTTTGTTTTTTGAAGGTGGCATACTTGCAAAGTCAGCTGATGCAAGCCAAGGCTCAACTTGCACAAACCCTGATTGATTCAGGAGGAAACATGGAGATTCAATGGACAGGAAATTTCAATAATCACCCAATTACAGGAATCCCAAATTTTCCAAATTATCAAACTCAAATGATGAACCCTGCAGTTTCCCCACAGAGCTCTCTGGAATCTGCTGCCAACAACGACGAAGCATTATTATTCATGAACAACTTTCAAGAGAGCCAAAGCAGATCCCCAGAAGCTCAATTTCAACAATTTTCAAGAAAAAGACCAGCTTCTTGTCATGCTGATGTTGGAGAGCTCCAAGCTTTGGCCCTCAGAATGATGAGAAACTAAATTAGCCTGTAATTTGTCTCGAGAGACGATGATGATTTTGATAGTATTTTTTTCTACTACAACGACACATGAGGTCGAGGTTCGAACCTCTGATCTCTAACCAGATGA

mRNA sequence

CTCCTCGTGCGCCCCTTTCTACCTCTAATGGCTTCTTCCTCTTCTTCTTCTTCAAACTCTTCTTCTGTCTCAGCTGGCACTGGCTCTCCTTGCGGCGCATGCAAGTTTCTCCGCCGCAAATGTCTGCCTGATTGCATTTTTGCTCCTTACTTTTGCTCCGAACAAGGCCCTGCAAGGTTCGCCGCCATTCACAAGGTGTTTGGAGCTAGCAATGTCTCCAAGTTGCTCCTCCATGTCCCTGTTCCTGATCGCTGTGAGGCTGTTGTCACCATTGCCTATGAAGCTCAAGCTCGCATTCGTGACCCTGTTTATGGCTGTGTTGCTCATATTTTTGCTCTCCAACAACAGGTGGCATACTTGCAAAGTCAGCTGATGCAAGCCAAGGCTCAACTTGCACAAACCCTGATTGATTCAGGAGGAAACATGGAGATTCAATGGACAGGAAATTTCAATAATCACCCAATTACAGGAATCCCAAATTTTCCAAATTATCAAACTCAAATGATGAACCCTGCAGTTTCCCCACAGAGCTCTCTGGAATCTGCTGCCAACAACGACGAAGCATTATTATTCATGAACAACTTTCAAGAGAGCCAAAGCAGATCCCCAGAAGCTCAATTTCAACAATTTTCAAGAAAAAGACCAGCTTCTTGTCATGCTGATGTTGGAGAGCTCCAAGCTTTGGCCCTCAGAATGATGAGAAACTAA

Coding sequence (CDS)

CTCCTCGTGCGCCCCTTTCTACCTCTAATGGCTTCTTCCTCTTCTTCTTCTTCAAACTCTTCTTCTGTCTCAGCTGGCACTGGCTCTCCTTGCGGCGCATGCAAGTTTCTCCGCCGCAAATGTCTGCCTGATTGCATTTTTGCTCCTTACTTTTGCTCCGAACAAGGCCCTGCAAGGTTCGCCGCCATTCACAAGGTGTTTGGAGCTAGCAATGTCTCCAAGTTGCTCCTCCATGTCCCTGTTCCTGATCGCTGTGAGGCTGTTGTCACCATTGCCTATGAAGCTCAAGCTCGCATTCGTGACCCTGTTTATGGCTGTGTTGCTCATATTTTTGCTCTCCAACAACAGGTGGCATACTTGCAAAGTCAGCTGATGCAAGCCAAGGCTCAACTTGCACAAACCCTGATTGATTCAGGAGGAAACATGGAGATTCAATGGACAGGAAATTTCAATAATCACCCAATTACAGGAATCCCAAATTTTCCAAATTATCAAACTCAAATGATGAACCCTGCAGTTTCCCCACAGAGCTCTCTGGAATCTGCTGCCAACAACGACGAAGCATTATTATTCATGAACAACTTTCAAGAGAGCCAAAGCAGATCCCCAGAAGCTCAATTTCAACAATTTTCAAGAAAAAGACCAGCTTCTTGTCATGCTGATGTTGGAGAGCTCCAAGCTTTGGCCCTCAGAATGATGAGAAACTAA

Protein sequence

LLVRPFLPLMASSSSSSSNSSSVSAGTGSPCGACKFLRRKCLPDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQSQLMQAKAQLAQTLIDSGGNMEIQWTGNFNNHPITGIPNFPNYQTQMMNPAVSPQSSLESAANNDEALLFMNNFQESQSRSPEAQFQQFSRKRPASCHADVGELQALALRMMRN
Homology
BLAST of Spg038175 vs. NCBI nr
Match: XP_022967414.1 (LOB domain-containing protein 16-like [Cucurbita maxima])

HSP 1 Score: 330.9 bits (847), Expect = 9.1e-87
Identity = 177/237 (74.68%), Postives = 200/237 (84.39%), Query Frame = 0

Query: 9   LMASSSSSSSNSSSVS----------AGTGSPCGACKFLRRKCLPDCIFAPYFCSEQGPA 68
           + +SSSSSS+ +SSVS           G GSPCGACKFLRRKC+ +CIFAPYF SEQG A
Sbjct: 1   MASSSSSSSTANSSVSGGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAA 60

Query: 69  RFAAIHKVFGASNVSKLLLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVA 128
           RFAA+HKVFGASNVSKLLLHVPV DRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVA
Sbjct: 61  RFAAVHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVA 120

Query: 129 YLQSQLMQAKAQLAQTLIDSGGNMEIQWTGNFNNHPITGIPNFPNYQTQMMNPAVSPQSS 188
           YLQ+QLMQAKAQLAQTL+DSGGNME+QWTG+FNN+   GIP+  NY+TQ+MNPAVSPQSS
Sbjct: 121 YLQAQLMQAKAQLAQTLMDSGGNMELQWTGSFNNNLSNGIPS--NYETQIMNPAVSPQSS 180

Query: 189 LESAANNDEALLFMNNFQESQSRSPEAQFQQFSRKRPASCHADVGELQALALRMMRN 236
           +ESAANND AL+FMN++QESQ+          +R+R ASCH D+GELQALALRMMRN
Sbjct: 181 VESAANNDAALMFMNHYQESQT---------LARRRSASCHGDLGELQALALRMMRN 226

BLAST of Spg038175 vs. NCBI nr
Match: XP_023511722.1 (LOB domain-containing protein 16-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 328.2 bits (840), Expect = 5.9e-86
Identity = 175/236 (74.15%), Postives = 199/236 (84.32%), Query Frame = 0

Query: 9   LMASSSSSSSNSSSVS---------AGTGSPCGACKFLRRKCLPDCIFAPYFCSEQGPAR 68
           + +SSSSSS+ +SSVS          G GSPCGACKFLRRKC+ +CIFAPYF SEQG AR
Sbjct: 1   MASSSSSSSTANSSVSGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAAR 60

Query: 69  FAAIHKVFGASNVSKLLLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAY 128
           FAA+HKVFGASNVSKLLLHVP  DRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVAY
Sbjct: 61  FAAVHKVFGASNVSKLLLHVPAHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVAY 120

Query: 129 LQSQLMQAKAQLAQTLIDSGGNMEIQWTGNFNNHPITGIPNFPNYQTQMMNPAVSPQSSL 188
           LQ+QLMQAKAQLAQTL++SGGNME+QWTG+FNN+   GIP+  NY+TQ+MNPAVSPQSS+
Sbjct: 121 LQAQLMQAKAQLAQTLMESGGNMELQWTGSFNNNLSNGIPS--NYETQIMNPAVSPQSSV 180

Query: 189 ESAANNDEALLFMNNFQESQSRSPEAQFQQFSRKRPASCHADVGELQALALRMMRN 236
           ESAANND AL+FMN++QESQ+          +R+R ASCH D+GELQALALRMMRN
Sbjct: 181 ESAANNDAALMFMNHYQESQT---------LARRRSASCHGDLGELQALALRMMRN 225

BLAST of Spg038175 vs. NCBI nr
Match: XP_038888851.1 (LOB domain-containing protein 16-like [Benincasa hispida])

HSP 1 Score: 326.2 bits (835), Expect = 2.2e-85
Identity = 189/241 (78.42%), Postives = 200/241 (82.99%), Query Frame = 0

Query: 10  MASSSSSSSNSSSVSAG-----TGSPCGACKFLRRKCLPDCIFAPYFCSEQGPARFAAIH 69
           MASSSSSS +     +G      GSPCGACKFLRRKC+ DCIFAPYFCSEQG ARFAAIH
Sbjct: 1   MASSSSSSVSCGGGGSGGGGGSGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIH 60

Query: 70  KVFGASNVSKLLLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQSQL 129
           KVFGASNVSKLLLHVPV DRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVAYLQ+QL
Sbjct: 61  KVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQL 120

Query: 130 MQAKAQLAQTLIDSGGNMEIQWTGNFNNHPITGIPN--FPNYQTQMM--NPAVSPQSSLE 189
           MQAKAQLAQTL+DS GNMEIQWT NFNN+   GIPN    NYQTQ+M  NPAVSPQSSLE
Sbjct: 121 MQAKAQLAQTLMDSRGNMEIQWTENFNNNLSNGIPNNFQNNYQTQIMNNNPAVSPQSSLE 180

Query: 190 SAANNDEALLFMN---NFQESQSRSP-EAQF-QQFSRKRPASCHA-DVGELQALALRMMR 236
           SAANNDEALLF+N   NF ESQSRSP E+QF Q F  K+  S H  D+GELQALALRMMR
Sbjct: 181 SAANNDEALLFINQIHNFHESQSRSPEESQFLQPFPTKKLPSSHVHDLGELQALALRMMR 240

BLAST of Spg038175 vs. NCBI nr
Match: KAG6571511.1 (LOB domain-containing protein 16, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 324.3 bits (830), Expect = 8.5e-85
Identity = 178/237 (75.11%), Postives = 197/237 (83.12%), Query Frame = 0

Query: 10  MASSSSSSSNS---SSVS--------AGTGSPCGACKFLRRKCLPDCIFAPYFCSEQGPA 69
           MASSSSSSS+S   SSVS         G GSPCGACKFLRRKC+ DCIFAPYF SEQG A
Sbjct: 1   MASSSSSSSSSTANSSVSGGGGGGGGGGGGSPCGACKFLRRKCVADCIFAPYFSSEQGAA 60

Query: 70  RFAAIHKVFGASNVSKLLLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVA 129
           RFAA+HKVFGASNVSKLL HVP  DRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVA
Sbjct: 61  RFAAVHKVFGASNVSKLLHHVPAHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVA 120

Query: 130 YLQSQLMQAKAQLAQTLIDSGGNMEIQWTGNFNNHPITGIPNFPNYQTQMMNPAVSPQSS 189
            LQ+QLMQAKAQLAQTL++SGGNME+QWTG+FNN+   GIP+  NY+TQ+MNPAVSPQSS
Sbjct: 121 CLQAQLMQAKAQLAQTLMESGGNMELQWTGSFNNNLSNGIPS--NYETQIMNPAVSPQSS 180

Query: 190 LESAANNDEALLFMNNFQESQSRSPEAQFQQFSRKRPASCHADVGELQALALRMMRN 236
           +ESAANND AL+FMN++QESQ+           R+R ASCH D+GELQALALRMMRN
Sbjct: 181 VESAANNDAALMFMNHYQESQT---------LGRRRSASCHGDLGELQALALRMMRN 226

BLAST of Spg038175 vs. NCBI nr
Match: KAG7011259.1 (LOB domain-containing protein 16, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 323.2 bits (827), Expect = 1.9e-84
Identity = 174/236 (73.73%), Postives = 196/236 (83.05%), Query Frame = 0

Query: 9   LMASSSSSSSNSSSVS---------AGTGSPCGACKFLRRKCLPDCIFAPYFCSEQGPAR 68
           + +SSSSSS+ +SSVS          G GSPCGACKFLRRKC+ DCIFAPYF SEQG AR
Sbjct: 1   MASSSSSSSTANSSVSGGGGGGGGGGGGGSPCGACKFLRRKCVADCIFAPYFSSEQGAAR 60

Query: 69  FAAIHKVFGASNVSKLLLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAY 128
           FAA+HKVFGASNVSKLL HVP  DRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVA 
Sbjct: 61  FAAVHKVFGASNVSKLLHHVPAHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVAC 120

Query: 129 LQSQLMQAKAQLAQTLIDSGGNMEIQWTGNFNNHPITGIPNFPNYQTQMMNPAVSPQSSL 188
           LQ+QLMQAKAQLAQTL++SGGNME+QWTG+FNN+   GIP+  NY+TQ+MNPAVSPQSS+
Sbjct: 121 LQAQLMQAKAQLAQTLMESGGNMELQWTGSFNNNLSNGIPS--NYETQIMNPAVSPQSSV 180

Query: 189 ESAANNDEALLFMNNFQESQSRSPEAQFQQFSRKRPASCHADVGELQALALRMMRN 236
           ESAANND AL+FMN++QESQ+           R+R ASCH D+GELQALALRMMRN
Sbjct: 181 ESAANNDAALMFMNHYQESQT---------LGRRRSASCHGDLGELQALALRMMRN 225

BLAST of Spg038175 vs. ExPASy Swiss-Prot
Match: Q9SLB7 (LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 7.3e-55
Identity = 131/244 (53.69%), Postives = 160/244 (65.57%), Query Frame = 0

Query: 17  SSNSSSVSAGTGSPCGACKFLRRKCLPDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLL 76
           +S+ +  +AGTGSPCGACKFLRRKC  DCIFAPYF SEQG ARFAAIHKVFGASNVSKLL
Sbjct: 2   ASSGNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLL 61

Query: 77  LHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQSQLMQAKAQLAQTLI 136
           L+VP+ DRCEAVVTIAYEAQAR+ DPVYGCV+HIFALQQQVA+LQSQ+MQ KAQ+A    
Sbjct: 62  LNVPIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQT 121

Query: 137 DSGGNM--EIQWTGNFNNHPITGIP------------NFPNYQTQMMNPAVSPQSSL-ES 196
            + G++    + T  F     T +             + P Y     N  VSPQSSL ES
Sbjct: 122 SAAGDLRHSSESTNQFMTWQQTSVSPIGSAYSTPYNHHQPYYGHVNPNNPVSPQSSLEES 181

Query: 197 AANNDEALLFMNNFQESQSRSPEAQFQQF---------SRKRPAS-CHADVGELQALALR 236
            +N    +    N +E+  ++    +            ++KR  S C +D+GELQALALR
Sbjct: 182 FSNTSSDVTTTANVRETHHQTGGGVYGHDGIGFHEGYPNKKRSVSYCSSDLGELQALALR 241

BLAST of Spg038175 vs. ExPASy Swiss-Prot
Match: Q9M2J7 (LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 5.4e-42
Identity = 80/116 (68.97%), Postives = 97/116 (83.62%), Query Frame = 0

Query: 21  SSVSAGTGSPCGACKFLRRKCLPDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHVP 80
           +S S+ +GSPCGACKFLRRKC   C+FAPYFC EQG + FAAIHKVFGASN SKLL H+P
Sbjct: 2   TSSSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLP 61

Query: 81  VPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQSQLMQAKAQLAQTLI 137
           + DRCEA +TI+YEAQAR++DP+YGCV+HIFALQQQV  LQ++L   K Q AQ++I
Sbjct: 62  ISDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMI 117

BLAST of Spg038175 vs. ExPASy Swiss-Prot
Match: Q5UG13 (LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=CRL1 PE=1 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 9.3e-42
Identity = 83/108 (76.85%), Postives = 91/108 (84.26%), Query Frame = 0

Query: 26  GTGSPCGACKFLRRKCLPDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHVPVPDRC 85
           G GSPCGACKFLRRKC+  C+FAPYFC EQG A FAAIHKVFGASNVSKLL H+P+ DR 
Sbjct: 3   GFGSPCGACKFLRRKCVRGCVFAPYFCHEQGAAHFAAIHKVFGASNVSKLLAHLPLADRP 62

Query: 86  EAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQSQLMQAKAQLAQ 134
           EA VTI+YEAQAR+RDP+YGCVAHIFALQQQV  LQ+QL   KA  AQ
Sbjct: 63  EAAVTISYEAQARLRDPIYGCVAHIFALQQQVMTLQAQLASLKAAAAQ 110

BLAST of Spg038175 vs. ExPASy Swiss-Prot
Match: O22131 (LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 SV=2)

HSP 1 Score: 170.2 bits (430), Expect = 2.7e-41
Identity = 85/117 (72.65%), Postives = 94/117 (80.34%), Query Frame = 0

Query: 16  SSSNSSSVSAGTGSPCGACKFLRRKCLPDCIFAPYFCSEQGPARFAAIHKVFGASNVSKL 75
           SS    S   G G PCGACKFLRRKC+P CIFAPYF SEQG A FAA+HKVFGASNVSKL
Sbjct: 23  SSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKL 82

Query: 76  LLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQSQLMQAKAQLA 133
           LLH+PV  R +AVVTI YEAQARIRDP+YGCVAHIFALQQQV  LQ+++   +A LA
Sbjct: 83  LLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLA 139

BLAST of Spg038175 vs. ExPASy Swiss-Prot
Match: O81323 (LOB domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=LBD30 PE=1 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.3e-38
Identity = 82/118 (69.49%), Postives = 94/118 (79.66%), Query Frame = 0

Query: 15  SSSSNSSSVSAGTGSPCGACKFLRRKCLPDCIFAPYFCSEQGPARFAAIHKVFGASNVSK 74
           SSS N SS S G G PCGACKFLRRKC+  CIFAPYF SEQG A FAA+HKVFGASNVSK
Sbjct: 2   SSSGNPSSSSGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNVSK 61

Query: 75  LLLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQSQLMQAKAQLA 133
           LL HVP   R +AVV+I +EAQAR+RDP+YGCV+HI +LQQQV  LQ++L   +A LA
Sbjct: 62  LLHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQAHLA 119

BLAST of Spg038175 vs. ExPASy TrEMBL
Match: A0A6J1HWM7 (LOB domain-containing protein 16-like OS=Cucurbita maxima OX=3661 GN=LOC111466950 PE=3 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 4.4e-87
Identity = 177/237 (74.68%), Postives = 200/237 (84.39%), Query Frame = 0

Query: 9   LMASSSSSSSNSSSVS----------AGTGSPCGACKFLRRKCLPDCIFAPYFCSEQGPA 68
           + +SSSSSS+ +SSVS           G GSPCGACKFLRRKC+ +CIFAPYF SEQG A
Sbjct: 1   MASSSSSSSTANSSVSGGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAA 60

Query: 69  RFAAIHKVFGASNVSKLLLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVA 128
           RFAA+HKVFGASNVSKLLLHVPV DRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVA
Sbjct: 61  RFAAVHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVA 120

Query: 129 YLQSQLMQAKAQLAQTLIDSGGNMEIQWTGNFNNHPITGIPNFPNYQTQMMNPAVSPQSS 188
           YLQ+QLMQAKAQLAQTL+DSGGNME+QWTG+FNN+   GIP+  NY+TQ+MNPAVSPQSS
Sbjct: 121 YLQAQLMQAKAQLAQTLMDSGGNMELQWTGSFNNNLSNGIPS--NYETQIMNPAVSPQSS 180

Query: 189 LESAANNDEALLFMNNFQESQSRSPEAQFQQFSRKRPASCHADVGELQALALRMMRN 236
           +ESAANND AL+FMN++QESQ+          +R+R ASCH D+GELQALALRMMRN
Sbjct: 181 VESAANNDAALMFMNHYQESQT---------LARRRSASCHGDLGELQALALRMMRN 226

BLAST of Spg038175 vs. ExPASy TrEMBL
Match: A0A6J1HIG3 (LOB domain-containing protein 16-like OS=Cucurbita moschata OX=3662 GN=LOC111463903 PE=3 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 1.2e-84
Identity = 173/233 (74.25%), Postives = 196/233 (84.12%), Query Frame = 0

Query: 9   LMASSSSSSSNSSSVS------AGTGSPCGACKFLRRKCLPDCIFAPYFCSEQGPARFAA 68
           + +SSSSSS+ +SSVS       G GSPCGACKFLRRKC+ +CIFAPYF SEQG ARFAA
Sbjct: 1   MASSSSSSSTANSSVSGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAA 60

Query: 69  IHKVFGASNVSKLLLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQS 128
           +HKVFGASNVSKLL HVP  DRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVA LQ+
Sbjct: 61  VHKVFGASNVSKLLHHVPAHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVACLQA 120

Query: 129 QLMQAKAQLAQTLIDSGGNMEIQWTGNFNNHPITGIPNFPNYQTQMMNPAVSPQSSLESA 188
           QLMQAKAQLAQTL++SGGNME+QWTG+FNN+   GIP+  NY+TQ+MNPAVSPQSS+ESA
Sbjct: 121 QLMQAKAQLAQTLMESGGNMELQWTGSFNNNLSNGIPS--NYETQIMNPAVSPQSSVESA 180

Query: 189 ANNDEALLFMNNFQESQSRSPEAQFQQFSRKRPASCHADVGELQALALRMMRN 236
           ANND AL+FMN++QESQ+           R+R ASCH D+GELQALALRMMRN
Sbjct: 181 ANNDAALMFMNHYQESQT---------LGRRRSASCHGDLGELQALALRMMRN 222

BLAST of Spg038175 vs. ExPASy TrEMBL
Match: A0A5D3C536 (LOB domain-containing protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold718G00040 PE=3 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 6.6e-83
Identity = 182/238 (76.47%), Postives = 198/238 (83.19%), Query Frame = 0

Query: 10  MASSSSSSSNSS----SVSAGTGSPCGACKFLRRKCLPDCIFAPYFCSEQGPARFAAIHK 69
           MASSSS+S+N+S      S G GSPCGACKFLRRKC+ DCIFAPYFCSEQG ARFAAIHK
Sbjct: 1   MASSSSTSTNTSVSGCGGSGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHK 60

Query: 70  VFGASNVSKLLLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQSQLM 129
           VFGASNVSKLLLHVPV DRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVAYLQ+QLM
Sbjct: 61  VFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLM 120

Query: 130 QAKAQLAQTLIDSGGNMEIQWTGNFNNHPIT--GIPNFPNYQTQMMNPAVSPQSSLESAA 189
           QAKAQLAQTL+DSG NMEIQWTG+FNN  ++   IPN  NYQTQ+MN   +PQSSLESAA
Sbjct: 121 QAKAQLAQTLMDSGSNMEIQWTGDFNNSNLSNGSIPN-NNYQTQIMNNP-TPQSSLESAA 180

Query: 190 NNDEALLFMNN---FQESQ-SRSPEAQ--FQQFSRKRPASCHADVGELQALALRMMRN 236
           NNDEALLF+N    F ESQ SRS +     Q F RK+ +S HAD+GEL ALALRMMRN
Sbjct: 181 NNDEALLFINQNQLFHESQLSRSSQEPQILQPFPRKKLSSSHADLGELHALALRMMRN 236

BLAST of Spg038175 vs. ExPASy TrEMBL
Match: A0A1S3CG76 (LOB domain-containing protein 16 OS=Cucumis melo OX=3656 GN=LOC103500368 PE=3 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 6.6e-83
Identity = 182/238 (76.47%), Postives = 198/238 (83.19%), Query Frame = 0

Query: 10  MASSSSSSSNSS----SVSAGTGSPCGACKFLRRKCLPDCIFAPYFCSEQGPARFAAIHK 69
           MASSSS+S+N+S      S G GSPCGACKFLRRKC+ DCIFAPYFCSEQG ARFAAIHK
Sbjct: 1   MASSSSTSTNTSVSGCGGSGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHK 60

Query: 70  VFGASNVSKLLLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQSQLM 129
           VFGASNVSKLLLHVPV DRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVAYLQ+QLM
Sbjct: 61  VFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLM 120

Query: 130 QAKAQLAQTLIDSGGNMEIQWTGNFNNHPIT--GIPNFPNYQTQMMNPAVSPQSSLESAA 189
           QAKAQLAQTL+DSG NMEIQWTG+FNN  ++   IPN  NYQTQ+MN   +PQSSLESAA
Sbjct: 121 QAKAQLAQTLMDSGSNMEIQWTGDFNNSNLSNGSIPN-NNYQTQIMNNP-TPQSSLESAA 180

Query: 190 NNDEALLFMNN---FQESQ-SRSPEAQ--FQQFSRKRPASCHADVGELQALALRMMRN 236
           NNDEALLF+N    F ESQ SRS +     Q F RK+ +S HAD+GEL ALALRMMRN
Sbjct: 181 NNDEALLFINQNQLFHESQLSRSSQEPQILQPFPRKKLSSSHADLGELHALALRMMRN 236

BLAST of Spg038175 vs. ExPASy TrEMBL
Match: A0A0A0LAE8 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G398920 PE=3 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 1.1e-80
Identity = 180/243 (74.07%), Postives = 197/243 (81.07%), Query Frame = 0

Query: 10  MASSSSSSSNS--------SSVSAGTGSPCGACKFLRRKCLPDCIFAPYFCSEQGPARFA 69
           MASSSS+S+N+        S    G GSPCGACKFLRRKC+ DCIFAPYFCSEQG ARFA
Sbjct: 1   MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA 60

Query: 70  AIHKVFGASNVSKLLLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQ 129
           AIHKVFGASNVSKLLLHVPV DRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVAYLQ
Sbjct: 61  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 120

Query: 130 SQLMQAKAQLAQTLIDSGGNMEIQWTGNFNNHPIT--GIPNFPNYQTQMMNPAVSPQSSL 189
           +QLM AKAQLA+TL+DSG NMEIQWTG+FNN+ ++   IP+  NYQTQ+ N   SPQSSL
Sbjct: 121 TQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPS-NNYQTQITNNP-SPQSSL 180

Query: 190 ESAANNDEALLFMNN---FQESQ--SRSPEAQF-QQFSRKR-PASCHADVGELQALALRM 236
           ESAANNDEALLF+N    F ESQ    S E QF Q F RK+ P+S HAD+GEL ALALRM
Sbjct: 181 ESAANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRM 240

BLAST of Spg038175 vs. TAIR 10
Match: AT2G42430.1 (lateral organ boundaries-domain 16 )

HSP 1 Score: 215.3 bits (547), Expect = 5.2e-56
Identity = 131/244 (53.69%), Postives = 160/244 (65.57%), Query Frame = 0

Query: 17  SSNSSSVSAGTGSPCGACKFLRRKCLPDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLL 76
           +S+ +  +AGTGSPCGACKFLRRKC  DCIFAPYF SEQG ARFAAIHKVFGASNVSKLL
Sbjct: 2   ASSGNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLL 61

Query: 77  LHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQSQLMQAKAQLAQTLI 136
           L+VP+ DRCEAVVTIAYEAQAR+ DPVYGCV+HIFALQQQVA+LQSQ+MQ KAQ+A    
Sbjct: 62  LNVPIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQT 121

Query: 137 DSGGNM--EIQWTGNFNNHPITGIP------------NFPNYQTQMMNPAVSPQSSL-ES 196
            + G++    + T  F     T +             + P Y     N  VSPQSSL ES
Sbjct: 122 SAAGDLRHSSESTNQFMTWQQTSVSPIGSAYSTPYNHHQPYYGHVNPNNPVSPQSSLEES 181

Query: 197 AANNDEALLFMNNFQESQSRSPEAQFQQF---------SRKRPAS-CHADVGELQALALR 236
            +N    +    N +E+  ++    +            ++KR  S C +D+GELQALALR
Sbjct: 182 FSNTSSDVTTTANVRETHHQTGGGVYGHDGIGFHEGYPNKKRSVSYCSSDLGELQALALR 241

BLAST of Spg038175 vs. TAIR 10
Match: AT3G58190.1 (lateral organ boundaries-domain 29 )

HSP 1 Score: 172.6 bits (436), Expect = 3.9e-43
Identity = 80/116 (68.97%), Postives = 97/116 (83.62%), Query Frame = 0

Query: 21  SSVSAGTGSPCGACKFLRRKCLPDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHVP 80
           +S S+ +GSPCGACKFLRRKC   C+FAPYFC EQG + FAAIHKVFGASN SKLL H+P
Sbjct: 2   TSSSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLP 61

Query: 81  VPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQSQLMQAKAQLAQTLI 137
           + DRCEA +TI+YEAQAR++DP+YGCV+HIFALQQQV  LQ++L   K Q AQ++I
Sbjct: 62  ISDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMI 117

BLAST of Spg038175 vs. TAIR 10
Match: AT2G45420.1 (LOB domain-containing protein 18 )

HSP 1 Score: 170.2 bits (430), Expect = 1.9e-42
Identity = 85/117 (72.65%), Postives = 94/117 (80.34%), Query Frame = 0

Query: 16  SSSNSSSVSAGTGSPCGACKFLRRKCLPDCIFAPYFCSEQGPARFAAIHKVFGASNVSKL 75
           SS    S   G G PCGACKFLRRKC+P CIFAPYF SEQG A FAA+HKVFGASNVSKL
Sbjct: 23  SSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKL 82

Query: 76  LLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQSQLMQAKAQLA 133
           LLH+PV  R +AVVTI YEAQARIRDP+YGCVAHIFALQQQV  LQ+++   +A LA
Sbjct: 83  LLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLA 139

BLAST of Spg038175 vs. TAIR 10
Match: AT4G00220.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 161.4 bits (407), Expect = 8.9e-40
Identity = 82/118 (69.49%), Postives = 94/118 (79.66%), Query Frame = 0

Query: 15  SSSSNSSSVSAGTGSPCGACKFLRRKCLPDCIFAPYFCSEQGPARFAAIHKVFGASNVSK 74
           SSS N SS S G G PCGACKFLRRKC+  CIFAPYF SEQG A FAA+HKVFGASNVSK
Sbjct: 2   SSSGNPSSSSGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNVSK 61

Query: 75  LLLHVPVPDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQSQLMQAKAQLA 133
           LL HVP   R +AVV+I +EAQAR+RDP+YGCV+HI +LQQQV  LQ++L   +A LA
Sbjct: 62  LLHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQAHLA 119

BLAST of Spg038175 vs. TAIR 10
Match: AT2G42440.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 158.3 bits (399), Expect = 7.6e-39
Identity = 74/111 (66.67%), Postives = 90/111 (81.08%), Query Frame = 0

Query: 26  GTGSPCGACKFLRRKCLPDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHVPVPDRC 85
           G+GSPCGACKFLRR+C+  C+FAPYFC EQG + FAAIH+VFGASN SKLL H+P+ DR 
Sbjct: 3   GSGSPCGACKFLRRRCVKGCVFAPYFCHEQGASHFAAIHQVFGASNASKLLSHLPMEDRR 62

Query: 86  EAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAYLQSQLMQAKAQLAQTLI 137
           EA  TI YEAQAR +DP+YGCV+HIF+LQQQV  LQ+QL   K Q  Q+++
Sbjct: 63  EAATTIYYEAQARRQDPIYGCVSHIFSLQQQVVNLQTQLEILKQQATQSMM 113

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022967414.19.1e-8774.68LOB domain-containing protein 16-like [Cucurbita maxima][more]
XP_023511722.15.9e-8674.15LOB domain-containing protein 16-like [Cucurbita pepo subsp. pepo][more]
XP_038888851.12.2e-8578.42LOB domain-containing protein 16-like [Benincasa hispida][more]
KAG6571511.18.5e-8575.11LOB domain-containing protein 16, partial [Cucurbita argyrosperma subsp. sororia... [more]
KAG7011259.11.9e-8473.73LOB domain-containing protein 16, partial [Cucurbita argyrosperma subsp. argyros... [more]
Match NameE-valueIdentityDescription
Q9SLB77.3e-5553.69LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 S... [more]
Q9M2J75.4e-4268.97LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 S... [more]
Q5UG139.3e-4276.85LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=C... [more]
O221312.7e-4172.65LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 S... [more]
O813231.3e-3869.49LOB domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=LBD30 PE=1 S... [more]
Match NameE-valueIdentityDescription
A0A6J1HWM74.4e-8774.68LOB domain-containing protein 16-like OS=Cucurbita maxima OX=3661 GN=LOC11146695... [more]
A0A6J1HIG31.2e-8474.25LOB domain-containing protein 16-like OS=Cucurbita moschata OX=3662 GN=LOC111463... [more]
A0A5D3C5366.6e-8376.47LOB domain-containing protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A1S3CG766.6e-8376.47LOB domain-containing protein 16 OS=Cucumis melo OX=3656 GN=LOC103500368 PE=3 SV... [more]
A0A0A0LAE81.1e-8074.07LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G398920 PE=3 SV... [more]
Match NameE-valueIdentityDescription
AT2G42430.15.2e-5653.69lateral organ boundaries-domain 16 [more]
AT3G58190.13.9e-4368.97lateral organ boundaries-domain 29 [more]
AT2G45420.11.9e-4272.65LOB domain-containing protein 18 [more]
AT4G00220.18.9e-4069.49Lateral organ boundaries (LOB) domain family protein [more]
AT2G42440.17.6e-3966.67Lateral organ boundaries (LOB) domain family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195LOBcoord: 30..128
e-value: 1.0E-36
score: 125.4
IPR004883Lateral organ boundaries, LOBPROSITEPS50891LOBcoord: 29..131
score: 22.856915
NoneNo IPR availablePANTHERPTHR31529LOB DOMAIN CONTAINING PROTEINcoord: 20..234
NoneNo IPR availablePANTHERPTHR31529:SF23LOB DOMAIN-CONTAINING PROTEIN 16coord: 20..234

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg038175.1Spg038175.1mRNA