Spg038144 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg038144
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	thylakoid lumenal protein TL20.3, chloroplastic
Location	scaffold12: 39007454 .. 39009332 (-)
RNA-Seq Expression	Spg038144
Synteny	Spg038144

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAAAGTGATCTTTATCGTTTAATCAGTAACAAAGTCTCTGAGATTCTAGGGTTTCTGAATTGCTCTTCCCCTTTCCCGTTCTTTCTTTAGAGTTAAATTGAAAATTTCCCGCGAGAGCTAACGCACTTATACTATAACTCGTACTCATACGATACGATACGACGTAGTTTTAGGCCAACAAATAAAAAATTATACTTTTTTTTTTTAATTTGGCAAAAAAAAAAAAGATTTTGGGTTAAATATTCATATCATGTCTACTTTTTCCTATTATTTCAGGTGCAGATTTGAGTGATACATTGATGGATCGAATGGTATGTTTTTTCTTTAAAATAGTTATTTTAAAATATAATATCATTTTGAAATATAATATTTTATATTTATAGAGTGAAATTTGTAGAGATTCAGTAGAATTGATATGCTAAATATCATAAAAGAAAAATCTTTTGTTTCTTTATCCCTATTGAATACTCTCATTTTTTAAAAACTATTTTTGATTACATTCCTTGCTTTCCTGAATTATGTAGAGTCTAATGTTTTATAATATTAAAAATAATTTCATTAATTAGCCCTGGATGGGTAACCATTTGGTTTTTGAAAATTAAGCTTAAAAACACTATTCCCACATTAAATTTCTTAGTAATTTGTTTTAATCAACCTTTAATTTCTTTGGGAAGTAAATTTATTATTTACGTTTATTCTCAAAAAAAAAAAAAATTATTATTTACGTTCTTTCAAAAAAACTTATTATTTACGTTTCTTTTCGAGCAAAAATCTGAATATAACGGTTTATTAATCACATGTATTTCAAATTTCTCTCATTCAAGATAGGTTAAAAGATTCAAAATTATTTATCAATAAACATGTTCAAATCTCCCACACTACATATTGTTTTAAAAAAATCAAATTTATTTCTAACATTTCAAATCACAATTTTTAGATCATTTTCTTGAACTTATTTGATTCCAAACATAATATTTTCAAATCTTCCCTAATTTGCATAATTTAAGGTTAGTGAGAAGGTTCCCTCAATCAATTGACTGCATAAAATCGGCAAAAGAAGTTGTCAATAATATTATTTTATATAAAAAAAACATCTTGCTCGATTTTTGTCAATAATGATAATTACAAAAAAAAGTAAAAAAATTTAGATTGGGATTATTGATATATTCAGGTACTAAACGAAGCAAATTTGACAAATGCGGTTCTGGTCCGATCAGTGCTGACACGCAGCGATCTCGGCGGTGCCATAATCGTTGGTGCCGACTTCAGCGACGCTGTCATTGACCTTCTCCAAAAGCAGGTTCAAAATCCATGACTTCTAACATTTTGATATACGTGTTTAACTAGTTGAACTATGTTTAGATTGATATTAAACCTCGACTTTTGTCAGGCACTTTGCAAGTATGCGAGTGGGACGAATCCAGTGACGGGAGTGAGCACGAGGGCGAGCTTGGGGTGCGGAAACAGCCGCAGAAATGCGTACGGAACGCCGTCATCTCCGCTGCTCAGCGCCCCGCCGCAGCAGCTGCTTGACCGCGACGGTTTCTGCGACCAAGGCACTGGCCTTTGTGATGCCACAAAATAGAAACTTAATCATGTATTGTTTAAATACAATACACAATTCCCCATAAAAAATCTTTTGTACAAAATAAACGCTTCTTCTGGATTTGATTTCGGATACGACAATAATTGCAGTGCTTTAAAGTTTGAATCCAACTGTACCGTTGGAAAACTGTGGATTTGGTGTGTTCTTGTCAAGCCAGCTCGGAGACTTTGGATCATTTTCTTTTAATTTTTCGCTACTATGACTGGAAAGCTGGCACCATCGCATAACTTTATATGGGAGAATATTATATTTAAAGTGTTTTTTCAC

mRNA sequence

ATGAAGAAAAGTGCAGATTTGAGTGATACATTGATGGATCGAATGGTACTAAACGAAGCAAATTTGACAAATGCGGTTCTGGTCCGATCAGTGCTGACACGCAGCGATCTCGGCGGTGCCATAATCGTTGGTGCCGACTTCAGCGACGCTGTCATTGACCTTCTCCAAAAGCAGGCACTTTGCAAGTATGCGAGTGGGACGAATCCAGTGACGGGAGTGAGCACGAGGGCGAGCTTGGGGTGCGGAAACAGCCGCAGAAATGCGTACGGAACGCCGTCATCTCCGCTGCTCAGCGCCCCGCCGCAGCAGCTGCTTGACCGCGACGGTTTCTGCGACCAAGGCACTGGCCTTTGTGATGCCACAAAATAG

Coding sequence (CDS)

ATGAAGAAAAGTGCAGATTTGAGTGATACATTGATGGATCGAATGGTACTAAACGAAGCAAATTTGACAAATGCGGTTCTGGTCCGATCAGTGCTGACACGCAGCGATCTCGGCGGTGCCATAATCGTTGGTGCCGACTTCAGCGACGCTGTCATTGACCTTCTCCAAAAGCAGGCACTTTGCAAGTATGCGAGTGGGACGAATCCAGTGACGGGAGTGAGCACGAGGGCGAGCTTGGGGTGCGGAAACAGCCGCAGAAATGCGTACGGAACGCCGTCATCTCCGCTGCTCAGCGCCCCGCCGCAGCAGCTGCTTGACCGCGACGGTTTCTGCGACCAAGGCACTGGCCTTTGTGATGCCACAAAATAG

Protein sequence

MKKSADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLLQKQALCKYASGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCDATK

Homology

[Close]

BLAST of Spg038144 vs. NCBI nr
Match: XP_008437129.1 (PREDICTED: thylakoid lumenal protein TL20.3, chloroplastic [Cucumis melo])

HSP 1 Score: 227.3 bits (578), Expect = 7.4e-56
Identity = 115/118 (97.46%), Postives = 116/118 (98.31%), Query Frame = 0


Query: 5   ADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLLQKQALCKYA 64
           ADLSDTLMDRMVLNEAN TNAVLVRSVLTRSDLGGAIIVGADFSDAVIDL QKQALCKYA
Sbjct: 164 ADLSDTLMDRMVLNEANFTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYA 223

Query: 65  SGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCDATK 123
           SGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLC+ATK
Sbjct: 224 SGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK 281

[Close]

BLAST of Spg038144 vs. NCBI nr
Match: KAA0039683.1 (thylakoid lumenal protein TL20.3 [Cucumis melo var. makuwa])

HSP 1 Score: 227.3 bits (578), Expect = 7.4e-56
Identity = 115/118 (97.46%), Postives = 116/118 (98.31%), Query Frame = 0


Query: 5   ADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLLQKQALCKYA 64
           ADLSDTLMDRMVLNEAN TNAVLVRSVLTRSDLGGAIIVGADFSDAVIDL QKQALCKYA
Sbjct: 132 ADLSDTLMDRMVLNEANFTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYA 191

Query: 65  SGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCDATK 123
           SGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLC+ATK
Sbjct: 192 SGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK 249

[Close]

BLAST of Spg038144 vs. NCBI nr
Match: XP_038875988.1 (thylakoid lumenal protein TL20.3, chloroplastic isoform X3 [Benincasa hispida])

HSP 1 Score: 227.3 bits (578), Expect = 7.4e-56
Identity = 115/118 (97.46%), Postives = 116/118 (98.31%), Query Frame = 0


Query: 5   ADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLLQKQALCKYA 64
           ADLSDTLMDRMVLNEAN TNAVLVRSVLTRSDLGGAIIVGADFSDAVIDL QKQALCKYA
Sbjct: 79  ADLSDTLMDRMVLNEANFTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYA 138

Query: 65  SGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCDATK 123
           SGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLC+ATK
Sbjct: 139 SGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK 196

[Close]

BLAST of Spg038144 vs. NCBI nr
Match: XP_038875985.1 (thylakoid lumenal protein TL20.3, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 227.3 bits (578), Expect = 7.4e-56
Identity = 115/118 (97.46%), Postives = 116/118 (98.31%), Query Frame = 0


Query: 5   ADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLLQKQALCKYA 64
           ADLSDTLMDRMVLNEAN TNAVLVRSVLTRSDLGGAIIVGADFSDAVIDL QKQALCKYA
Sbjct: 162 ADLSDTLMDRMVLNEANFTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYA 221

Query: 65  SGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCDATK 123
           SGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLC+ATK
Sbjct: 222 SGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK 279

[Close]

BLAST of Spg038144 vs. NCBI nr
Match: XP_022156470.1 (thylakoid lumenal protein TL20.3, chloroplastic isoform X2 [Momordica charantia])

HSP 1 Score: 226.5 bits (576), Expect = 1.3e-55
Identity = 115/118 (97.46%), Postives = 116/118 (98.31%), Query Frame = 0


Query: 5   ADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLLQKQALCKYA 64
           ADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAII GADFSDAVIDL QKQALCKYA
Sbjct: 79  ADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAIIEGADFSDAVIDLPQKQALCKYA 138

Query: 65  SGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCDATK 123
           SGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLC+ATK
Sbjct: 139 SGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK 196

[Close]

BLAST of Spg038144 vs. ExPASy Swiss-Prot
Match: Q8H1Q1 (Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TL20.3 PE=1 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 1.8e-52
Identity = 104/115 (90.43%), Postives = 109/115 (94.78%), Query Frame = 0


Query: 5   ADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLLQKQALCKYA 64
           ADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGA I GADFSDAVIDLLQKQALCKYA
Sbjct: 164 ADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAKIEGADFSDAVIDLLQKQALCKYA 223

Query: 65  SGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCD 120
           +GTNP+TGV TR SLGCGNSRRNAYG+PSSPLLSAPPQ+LL RDGFCD+ TGLCD
Sbjct: 224 TGTNPLTGVDTRKSLGCGNSRRNAYGSPSSPLLSAPPQRLLGRDGFCDEKTGLCD 278

[Close]

BLAST of Spg038144 vs. ExPASy Swiss-Prot
Match: B1WVN5 (Pentapeptide repeat protein Rfr32 OS=Crocosphaera subtropica (strain ATCC 51142 / BH68) OX=43989 GN=rfr32 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.3e-10
Identity = 38/77 (49.35%), Postives = 48/77 (62.34%), Query Frame = 0


Query: 5   ADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLLQKQALCKYA 64
           ADL++ L        A+LTNAVL  +++ R+    A I GADFS AV+D+ +   LC  A
Sbjct: 102 ADLTNGLAYLTSFKGADLTNAVLTEAIMMRTKFDDAKITGADFSLAVLDVYEVDKLCDRA 161

Query: 65  SGTNPVTGVSTRASLGC 82
            G NP TGVSTR SLGC
Sbjct: 162 DGVNPKTGVSTRESLGC 178

[Close]

BLAST of Spg038144 vs. ExPASy TrEMBL
Match: A0A5A7T9K1 (Thylakoid lumenal protein TL20.3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold558G00140 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.6e-56
Identity = 115/118 (97.46%), Postives = 116/118 (98.31%), Query Frame = 0


Query: 5   ADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLLQKQALCKYA 64
           ADLSDTLMDRMVLNEAN TNAVLVRSVLTRSDLGGAIIVGADFSDAVIDL QKQALCKYA
Sbjct: 132 ADLSDTLMDRMVLNEANFTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYA 191

Query: 65  SGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCDATK 123
           SGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLC+ATK
Sbjct: 192 SGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK 249

[Close]

BLAST of Spg038144 vs. ExPASy TrEMBL
Match: A0A1S3ATE2 (thylakoid lumenal protein TL20.3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103482643 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.6e-56
Identity = 115/118 (97.46%), Postives = 116/118 (98.31%), Query Frame = 0


Query: 5   ADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLLQKQALCKYA 64
           ADLSDTLMDRMVLNEAN TNAVLVRSVLTRSDLGGAIIVGADFSDAVIDL QKQALCKYA
Sbjct: 164 ADLSDTLMDRMVLNEANFTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYA 223

Query: 65  SGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCDATK 123
           SGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLC+ATK
Sbjct: 224 SGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK 281

[Close]

BLAST of Spg038144 vs. ExPASy TrEMBL
Match: A0A6J1DTJ6 (thylakoid lumenal protein TL20.3, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023358 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 6.1e-56
Identity = 115/118 (97.46%), Postives = 116/118 (98.31%), Query Frame = 0


Query: 5   ADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLLQKQALCKYA 64
           ADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAII GADFSDAVIDL QKQALCKYA
Sbjct: 165 ADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAIIEGADFSDAVIDLPQKQALCKYA 224

Query: 65  SGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCDATK 123
           SGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLC+ATK
Sbjct: 225 SGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK 282

[Close]

BLAST of Spg038144 vs. ExPASy TrEMBL
Match: A0A6J1DQD2 (thylakoid lumenal protein TL20.3, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023358 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 6.1e-56
Identity = 115/118 (97.46%), Postives = 116/118 (98.31%), Query Frame = 0


Query: 5   ADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLLQKQALCKYA 64
           ADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAII GADFSDAVIDL QKQALCKYA
Sbjct: 79  ADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAIIEGADFSDAVIDLPQKQALCKYA 138

Query: 65  SGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCDATK 123
           SGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLC+ATK
Sbjct: 139 SGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCEATK 196

[Close]

BLAST of Spg038144 vs. ExPASy TrEMBL
Match: A0A0A0KP67 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G160200 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 2.3e-55
Identity = 114/118 (96.61%), Postives = 115/118 (97.46%), Query Frame = 0


Query: 5   ADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLLQKQALCKYA 64
           ADLSDTLMDRMVLNEAN TNAVLVRSVLTRSDLGGAIIVGADFSDAVIDL QKQALCKYA
Sbjct: 162 ADLSDTLMDRMVLNEANFTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLPQKQALCKYA 221

Query: 65  SGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCDATK 123
           SGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQ TGLC+ATK
Sbjct: 222 SGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQDTGLCEATK 279

[Close]

BLAST of Spg038144 vs. TAIR 10
Match: AT1G12250.1 (Pentapeptide repeat-containing protein )

HSP 1 Score: 206.5 bits (524), Expect = 1.3e-53
Identity = 104/115 (90.43%), Postives = 109/115 (94.78%), Query Frame = 0


Query: 5   ADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLLQKQALCKYA 64
           ADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGA I GADFSDAVIDLLQKQALCKYA
Sbjct: 164 ADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAKIEGADFSDAVIDLLQKQALCKYA 223

Query: 65  SGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCD 120
           +GTNP+TGV TR SLGCGNSRRNAYG+PSSPLLSAPPQ+LL RDGFCD+ TGLCD
Sbjct: 224 TGTNPLTGVDTRKSLGCGNSRRNAYGSPSSPLLSAPPQRLLGRDGFCDEKTGLCD 278

[Close]

BLAST of Spg038144 vs. TAIR 10
Match: AT1G12250.2 (Pentapeptide repeat-containing protein )

HSP 1 Score: 206.5 bits (524), Expect = 1.3e-53
Identity = 104/115 (90.43%), Postives = 109/115 (94.78%), Query Frame = 0


Query: 5   ADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAIIVGADFSDAVIDLLQKQALCKYA 64
           ADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGA I GADFSDAVIDLLQKQALCKYA
Sbjct: 90  ADLSDTLMDRMVLNEANLTNAVLVRSVLTRSDLGGAKIEGADFSDAVIDLLQKQALCKYA 149

Query: 65  SGTNPVTGVSTRASLGCGNSRRNAYGTPSSPLLSAPPQQLLDRDGFCDQGTGLCD 120
           +GTNP+TGV TR SLGCGNSRRNAYG+PSSPLLSAPPQ+LL RDGFCD+ TGLCD
Sbjct: 150 TGTNPLTGVDTRKSLGCGNSRRNAYGSPSSPLLSAPPQRLLGRDGFCDEKTGLCD 204

The following BLAST results are available for this feature:

BLAST of Spg038144 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437129.1	7.4e-56	97.46	PREDICTED: thylakoid lumenal protein TL20.3, chloroplastic [Cucumis melo]	[more]
KAA0039683.1	7.4e-56	97.46	thylakoid lumenal protein TL20.3 [Cucumis melo var. makuwa]	[more]
XP_038875988.1	7.4e-56	97.46	thylakoid lumenal protein TL20.3, chloroplastic isoform X3 [Benincasa hispida]	[more]
XP_038875985.1	7.4e-56	97.46	thylakoid lumenal protein TL20.3, chloroplastic isoform X1 [Benincasa hispida]	[more]
XP_022156470.1	1.3e-55	97.46	thylakoid lumenal protein TL20.3, chloroplastic isoform X2 [Momordica charantia]	[more]

BLAST of Spg038144 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H1Q1	1.8e-52	90.43	Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
B1WVN5	1.3e-10	49.35	Pentapeptide repeat protein Rfr32 OS=Crocosphaera subtropica (strain ATCC 51142 ...	[more]

BLAST of Spg038144 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T9K1	3.6e-56	97.46	Thylakoid lumenal protein TL20.3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A1S3ATE2	3.6e-56	97.46	thylakoid lumenal protein TL20.3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1DTJ6	6.1e-56	97.46	thylakoid lumenal protein TL20.3, chloroplastic isoform X1 OS=Momordica charanti...	[more]
A0A6J1DQD2	6.1e-56	97.46	thylakoid lumenal protein TL20.3, chloroplastic isoform X2 OS=Momordica charanti...	[more]
A0A0A0KP67	2.3e-55	96.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G160200 PE=4 SV=1	[more]

BLAST of Spg038144 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12250.1	1.3e-53	90.43	Pentapeptide repeat-containing protein	[more]
AT1G12250.2	1.3e-53	90.43	Pentapeptide repeat-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001646	Pentapeptide repeat	PFAM	PF00805	Pentapeptide	coord: 17..49 e-value: 8.0E-7 score: 28.6
None	No IPR available	GENE3D	2.160.20.80		coord: 3..82 e-value: 1.8E-13 score: 51.8
None	No IPR available	PANTHER	PTHR47121	THYLAKOID LUMENAL PROTEIN TL20.3, CHLOROPLASTIC	coord: 4..120
None	No IPR available	SUPERFAMILY	141571	Pentapeptide repeat-like	coord: 4..52

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg038144.1	Spg038144.1	mRNA