Spg037928 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAAGAAACCATCGGGGACCAAGCAAGCATTTGTCGTCTTTGGAGCCTTAGCGCTGGGTTGGCTCGCCATTGAGATGGCTTTCAAGCCCTTCCTCGATAGAGCCCGCTCCGCCATGGACAACTCCGATCCGGCTCGGGATCCCGACGACCTTGTCGATAACCAATCTGATCAGAGGCCATCTGATGACGATCAAAGTACCACCGCTTAAATTGCAATTTCTAGGTATGAGTATGACAGGGAGGTCTGATGGAATAGTTTGTCGCCATCATGTTGTGCCTGTAAAAAGTGGAATTTTAGATCTTTTCGCTCCGTATCGTATAAGGTCAGTAGTAGACCATTTTAATTGAATTAAAGTGATTCAGCTTTTACTTTTATAAACCTGGCCTCCCGGCGCTTTCTGAATGTGCTTGATTTGCTAATCAATTCCACAACTTCCTCCTGTAAATCTAACTACAAGCTTGGAACTAAGGAGTGTTCTCATTACCTATTCGATTAATGGTTTAAAAAAATTAAGGTGTTTAACTTGACTAAAGCCTAGTTTTTTACATGATCATGTTATAGTTTTGTCAAACATTATTCAGTGGCCTAGCTGCATACCCACGCCCAGCTGTCATTTAGTGATACAAGTCTTCTGAATAGCGGAAGGAAACACCTAGAGGGTGAAGTGTACAAAACCTTCATTTTTACATGATGCTTTGTGTGTAAAAAGAGACTGAAAAGTCTGATGTAATTGGGTTTGTTAAACTACAATCCCTTGGCCTATTTAAGTTTTGAAAACCACCTCCATCATTTTATTTGTCTTCTCGTTTCCTTTAATTTCTTTGTGAAGGAGGGTGATTCATCCGTTGGGAGAAAAAGGATGGACTGGAGAGAGAGCAATGCAAATAGTAGTGGCAGAATTGTTTAATAACAGAATCAAAGCGAGAGTCTCCGAAGCTTTCTGTCTTCGCATACCCATTAGGGTATTGCGTCCAGAAAAAAAGAAAAAGAAATAA ATGGGAAAGAAACCATCGGGGACCAAGCAAGCATTTGTCGTCTTTGGAGCCTTAGCGCTGGGTTGGCTCGCCATTGAGATGGCTTTCAAGCCCTTCCTCGATAGAGCCCGCTCCGCCATGGACAACTCCGATCCGGCTCGGGATCCCGACGACCTTGTCGATAACCAATCTGATCAGAGGCCATCTGATGACGATCAAAATCTTTTCGCTCCGTATCGTATAAGGAGGGTGATTCATCCGTTGGGAGAAAAAGGATGGACTGGAGAGAGAGCAATGCAAATAGTAGTGGCAGAATTGTTTAATAACAGAATCAAAGCGAGAGTCTCCGAAGCTTTCTGTCTTCGCATACCCATTAGGGTATTGCGTCCAGAAAAAAAGAAAAAGAAATAA ATGGGAAAGAAACCATCGGGGACCAAGCAAGCATTTGTCGTCTTTGGAGCCTTAGCGCTGGGTTGGCTCGCCATTGAGATGGCTTTCAAGCCCTTCCTCGATAGAGCCCGCTCCGCCATGGACAACTCCGATCCGGCTCGGGATCCCGACGACCTTGTCGATAACCAATCTGATCAGAGGCCATCTGATGACGATCAAAATCTTTTCGCTCCGTATCGTATAAGGAGGGTGATTCATCCGTTGGGAGAAAAAGGATGGACTGGAGAGAGAGCAATGCAAATAGTAGTGGCAGAATTGTTTAATAACAGAATCAAAGCGAGAGTCTCCGAAGCTTTCTGTCTTCGCATACCCATTAGGGTATTGCGTCCAGAAAAAAAGAAAAAGAAATAA MGKKPSGTKQAFVVFGALALGWLAIEMAFKPFLDRARSAMDNSDPARDPDDLVDNQSDQRPSDDDQNLFAPYRIRRVIHPLGEKGWTGERAMQIVVAELFNNRIKARVSEAFCLRIPIRVLRPEKKKKK Homology
BLAST of Spg037928 vs. NCBI nr
Match: XP_038888886.1 (outer envelope membrane protein 7-like [Benincasa hispida] >XP_038888887.1 outer envelope membrane protein 7-like [Benincasa hispida] >XP_038888888.1 outer envelope membrane protein 7-like [Benincasa hispida] >XP_038888889.1 outer envelope membrane protein 7-like [Benincasa hispida]) HSP 1 Score: 127.1 bits (318), Expect = 1.1e-25 Identity = 63/70 (90.00%), Postives = 66/70 (94.29%), Query Frame = 0
BLAST of Spg037928 vs. NCBI nr
Match: XP_022155586.1 (outer envelope membrane protein 7-like [Momordica charantia]) HSP 1 Score: 122.1 bits (305), Expect = 3.5e-24 Identity = 60/70 (85.71%), Postives = 64/70 (91.43%), Query Frame = 0
BLAST of Spg037928 vs. NCBI nr
Match: KAG6606428.1 (Small nuclear ribonucleoprotein SmD1b, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 114.0 bits (284), Expect = 9.6e-22 Identity = 57/67 (85.07%), Postives = 60/67 (89.55%), Query Frame = 0
BLAST of Spg037928 vs. NCBI nr
Match: KAG7036368.1 (Small nuclear ribonucleoprotein SmD1b, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 114.0 bits (284), Expect = 9.6e-22 Identity = 57/67 (85.07%), Postives = 60/67 (89.55%), Query Frame = 0
BLAST of Spg037928 vs. NCBI nr
Match: XP_023553591.1 (outer envelope membrane protein 7-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 112.5 bits (280), Expect = 2.8e-21 Identity = 55/70 (78.57%), Postives = 61/70 (87.14%), Query Frame = 0
BLAST of Spg037928 vs. ExPASy Swiss-Prot
Match: Q9SVC4 (Outer envelope membrane protein 7 OS=Arabidopsis thaliana OX=3702 GN=OEP7 PE=1 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 5.5e-12 Identity = 34/48 (70.83%), Postives = 40/48 (83.33%), Query Frame = 0
BLAST of Spg037928 vs. ExPASy TrEMBL
Match: A0A6J1DS29 (outer envelope membrane protein 7-like OS=Momordica charantia OX=3673 GN=LOC111022685 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 1.7e-24 Identity = 60/70 (85.71%), Postives = 64/70 (91.43%), Query Frame = 0
BLAST of Spg037928 vs. ExPASy TrEMBL
Match: A0A6J1HGS4 (outer envelope membrane protein 7-like OS=Cucurbita moschata OX=3662 GN=LOC111463949 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 6.7e-21 Identity = 54/70 (77.14%), Postives = 60/70 (85.71%), Query Frame = 0
BLAST of Spg037928 vs. ExPASy TrEMBL
Match: A0A6J1HUQ5 (outer envelope membrane protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC111467002 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 8.8e-21 Identity = 53/67 (79.10%), Postives = 60/67 (89.55%), Query Frame = 0
BLAST of Spg037928 vs. ExPASy TrEMBL
Match: A0A5A7URM9 (6.7 kDa chloroplast outer envelope membrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00570 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 8.8e-21 Identity = 54/67 (80.60%), Postives = 59/67 (88.06%), Query Frame = 0
BLAST of Spg037928 vs. ExPASy TrEMBL
Match: A0A0A0KJE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G409970 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 7.2e-15 Identity = 48/67 (71.64%), Postives = 54/67 (80.60%), Query Frame = 0
BLAST of Spg037928 vs. TAIR 10
Match: AT3G52420.1 (outer envelope membrane protein 7 ) HSP 1 Score: 72.0 bits (175), Expect = 3.9e-13 Identity = 34/48 (70.83%), Postives = 40/48 (83.33%), Query Frame = 0
BLAST of Spg037928 vs. TAIR 10
Match: AT3G63160.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast outer membrane, thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: outer envelope membrane protein 7 (TAIR:AT3G52420.1); Has 26 Blast hits to 26 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 48.1 bits (113), Expect = 6.0e-06 Identity = 24/43 (55.81%), Postives = 30/43 (69.77%), Query Frame = 0
BLAST of Spg037928 vs. TAIR 10
Match: AT2G34585.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 43 Blast hits to 43 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 40.8 bits (94), Expect = 9.6e-04 Identity = 24/52 (46.15%), Postives = 32/52 (61.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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