Spg037255 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGGATCAAAAGTAATGAGGATTCTTCTTCTTTGGACAGAAATCGACGGTGGTCTCCTCCGAATGGCGTATTTTGGAAGCTTAACTCTGATGCTGCATGTTCGAAAGAGGTCTCGATGACAAGTCTTGGGATGATCTGCAGAAATTTTGAGGGCAAAGTTACGGTAGCTGCGTCAAAGGCTTTGGACGTGAGGTTGGAGGCCCATATTGCTGAATTATGGGCCATCCTTGAAGGTTTAAAGCTGGTTATTTCATTGGGCTGCACTATGTTAGTTGTGGAGTCCGATTGTCAACTTGCTATCAATTTCATCAATAAGGTTTCTCTTATTTGGTCAGATTCAGAGGCCATAGTTCTGTCTATTTGGAGCCTCTTACCTTTTTTTTAGGGATATCTCTTTCAATTTTGCTCCTAGATCTTGTAATAGGGTTGCCCATGAGATTGCTCGATATGGGAAATCTGTAAATAGCCATGACGTTTGGGTCTCTAATTTCTCAAACTGGATGTGTATGTGGGTCGAGTATGACCGTTCATTTTTAGCCCATGTGGCGTTATAATATGAGGTATTATTTTTCAAAAAAAAAAAAAAAAAAAAAAGCTTAAGGTTCCTTAAAGAGTGAAAGTTTTCCTCTAGACTTTTGCTTACAAGAATTCAAATTCTCGTTGATCACTTCTTCTTTTTTTTTTATAGAAAACCAGCTTTCATGGAGAAAACATGAAAGAATACAAGGGCATACAAAAAGACCAAGCCCATAGAAGGGAGTCCTCTTAAAGGAAGGGGCTCCAATCCAATAAGAAAAGACCTAAAGGATAATTACAAAATAAATTTGTAACCGAGGCCCAAAAGGAAGCATGGAATCTGGATAAAGACCATACATCGCCCGGGCTTCTAACTATCCCCCTAAACACTCTGTTATTTCTCTCCCCCCATAAGTTCCATAAGAGCGCACACATGTCGGCCTACCATAAAAATCTTCCTTTGCCATGGAGGGTCAGATTGAGGAGGAACTCTTAACACTCTCAGATCTAGGTAGTTGATCCGTTGCTGCCCAAACGCATCAAAGAAAAGGTCCCAACGGGAGCGAACAAAATCACAGCTCCAAAGAATATGATCCAAATCTTCCTCCACCTTCTGACAAAGGATGGAACAAAAGGGGCCAAACAAATGGGCATTCCTTCTCAAGAGCCTACCAAAGGTATTAACCCTACCATGGAGAACTTTCCAGACAAAAATCCTTACCTTCTTCGACACTTTCACCTTCCACATGAAAGAAAAGATAGACTTGCTATAGGGAGGATGATTCAACAAAGAAGTGAAGTAGGATTTACATGAGAACCCGACAGAAGGATCAGGGCTTCAACAACGAAAATCTCTCCTCCCCAACCAAAAGATAGACTCGAATTTTTGGAATGCTCCTTGACTATATCTTCGAGCTCAAACTCTCGAAGATATAGTTGTTGATCACCCAAGTCTTTTCAAATTGTGGTATCAAGTTAGTTGGTCCAGACTTTTGCAAAATCTTTTGGAATGTCTACGTGCACAATGATGTGGATATTGTCCTTCCTGAACTCTCATTAAGTGAGTGGATCAAGGGAAAGGCTAGGTTCACGTGGAAGAGTGCGGCTAGAACTATTCCTTTGGTCTCTTTGGATTGA ATGCGGATCAAAAGTAATGAGGATTCTTCTTCTTTGGACAGAAATCGACGGTGGTCTCCTCCGAATGGCGTATTTTGGAAGCTTAACTCTGATGCTGCATGTTCGAAAGAGGTCTCGATGACAAGTCTTGGGATGATCTGCAGAAATTTTGAGGGCAAAGTTACGGTAGCTGCGTCAAAGGCTTTGGACGTGAGGTTGGAGGCCCATATTGCTGAATTATGGGCCATCCTTGAAGGTTTAAAGCTGGTTATTTCATTGGGCTGCACTATGTTAGTTGTGGAGTCCGATTGTCAACTTGCTATCAATTTCATCAATAAGGTTTCTCTTATTTGGGTTGCCCATGAGATTGCTCGATATGGGAAATCTGTAAATAGCCATGACGTTTGGGTAGTTGATCCGTTGCTGCCCAAACGCATCAAAGAAAAGGTCCCAACGGGAGCGAACAAAATCACAGCTCCAAAGAATATGATCCAAATCTTCCTCCACCTTCTGACAAAGGATGGAACAAAAGGGGCCAAACAAATGGGCATTCCTTCTCAAGAGCCTACCAAAGTTGGTCCAGACTTTTGCAAAATCTTTTGGAATGTCTACGTGCACAATGATGTGGATATTGTCCTTCCTGAACTCTCATTAAGTGAGTGGATCAAGGGAAAGGCTAGGTTCACGTGGAAGAGTGCGGCTAGAACTATTCCTTTGGTCTCTTTGGATTGA ATGCGGATCAAAAGTAATGAGGATTCTTCTTCTTTGGACAGAAATCGACGGTGGTCTCCTCCGAATGGCGTATTTTGGAAGCTTAACTCTGATGCTGCATGTTCGAAAGAGGTCTCGATGACAAGTCTTGGGATGATCTGCAGAAATTTTGAGGGCAAAGTTACGGTAGCTGCGTCAAAGGCTTTGGACGTGAGGTTGGAGGCCCATATTGCTGAATTATGGGCCATCCTTGAAGGTTTAAAGCTGGTTATTTCATTGGGCTGCACTATGTTAGTTGTGGAGTCCGATTGTCAACTTGCTATCAATTTCATCAATAAGGTTTCTCTTATTTGGGTTGCCCATGAGATTGCTCGATATGGGAAATCTGTAAATAGCCATGACGTTTGGGTAGTTGATCCGTTGCTGCCCAAACGCATCAAAGAAAAGGTCCCAACGGGAGCGAACAAAATCACAGCTCCAAAGAATATGATCCAAATCTTCCTCCACCTTCTGACAAAGGATGGAACAAAAGGGGCCAAACAAATGGGCATTCCTTCTCAAGAGCCTACCAAAGTTGGTCCAGACTTTTGCAAAATCTTTTGGAATGTCTACGTGCACAATGATGTGGATATTGTCCTTCCTGAACTCTCATTAAGTGAGTGGATCAAGGGAAAGGCTAGGTTCACGTGGAAGAGTGCGGCTAGAACTATTCCTTTGGTCTCTTTGGATTGA MRIKSNEDSSSLDRNRRWSPPNGVFWKLNSDAACSKEVSMTSLGMICRNFEGKVTVAASKALDVRLEAHIAELWAILEGLKLVISLGCTMLVVESDCQLAINFINKVSLIWVAHEIARYGKSVNSHDVWVVDPLLPKRIKEKVPTGANKITAPKNMIQIFLHLLTKDGTKGAKQMGIPSQEPTKVGPDFCKIFWNVYVHNDVDIVLPELSLSEWIKGKARFTWKSAARTIPLVSLD Homology
BLAST of Spg037255 vs. NCBI nr
Match: XP_040996092.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC121242268 [Juglans microcarpa x Juglans regia]) HSP 1 Score: 77.8 bits (190), Expect = 1.4e-10 Identity = 42/92 (45.65%), Postives = 58/92 (63.04%), Query Frame = 0
BLAST of Spg037255 vs. NCBI nr
Match: OMO72757.1 (hypothetical protein CCACVL1_17615 [Corchorus capsularis]) HSP 1 Score: 70.9 bits (172), Expect = 1.7e-08 Identity = 39/89 (43.82%), Postives = 53/89 (59.55%), Query Frame = 0
BLAST of Spg037255 vs. NCBI nr
Match: XP_024033533.1 (uncharacterized protein LOC112095662 [Citrus clementina]) HSP 1 Score: 70.1 bits (170), Expect = 2.9e-08 Identity = 43/134 (32.09%), Postives = 66/134 (49.25%), Query Frame = 0
BLAST of Spg037255 vs. NCBI nr
Match: XP_015388012.1 (uncharacterized protein LOC107177940 [Citrus sinensis]) HSP 1 Score: 69.7 bits (169), Expect = 3.8e-08 Identity = 43/134 (32.09%), Postives = 67/134 (50.00%), Query Frame = 0
BLAST of Spg037255 vs. NCBI nr
Match: XP_015386618.1 (uncharacterized protein LOC107177388 [Citrus sinensis]) HSP 1 Score: 67.8 bits (164), Expect = 1.4e-07 Identity = 39/114 (34.21%), Postives = 62/114 (54.39%), Query Frame = 0
BLAST of Spg037255 vs. ExPASy TrEMBL
Match: A0A1R3HQR7 (Ribonuclease H OS=Corchorus capsularis OX=210143 GN=CCACVL1_17615 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 8.3e-09 Identity = 39/89 (43.82%), Postives = 53/89 (59.55%), Query Frame = 0
BLAST of Spg037255 vs. ExPASy TrEMBL
Match: A0A1S8ABJ9 (Ribonuclease H-like superfamily protein (Fragment) OS=Citrus limon OX=2708 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 9.1e-08 Identity = 38/89 (42.70%), Postives = 51/89 (57.30%), Query Frame = 0
BLAST of Spg037255 vs. ExPASy TrEMBL
Match: A0A6J1BQ49 (uncharacterized protein LOC111004786 OS=Momordica charantia OX=3673 GN=LOC111004786 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 9.1e-08 Identity = 45/100 (45.00%), Postives = 55/100 (55.00%), Query Frame = 0
BLAST of Spg037255 vs. ExPASy TrEMBL
Match: A0A1R3GKQ5 (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_25420 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 2.7e-07 Identity = 36/99 (36.36%), Postives = 59/99 (59.60%), Query Frame = 0
BLAST of Spg037255 vs. ExPASy TrEMBL
Match: A0A6J1DJL6 (uncharacterized protein LOC111021711 OS=Momordica charantia OX=3673 GN=LOC111021711 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 4.5e-07 Identity = 39/101 (38.61%), Postives = 58/101 (57.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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