Spg037043 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg037043
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold6: 28890334 .. 28891607 (-)
RNA-Seq ExpressionSpg037043
SyntenySpg037043
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTCGTTCGCCGCCGACGATAAGTCCCCTCTCTCTTTCTCGTCTCTTTCTCCATCTCGGCCCCACTCTCTTTCTCTCTCTCTACTGTGTACAAGCCTCCGCGCGCCTCCACCGTTGATCCGCTGCAAGTCGCACACGAACGATCTCCCCGCACCGCCACGAATCCGGCCAGCCCGTGACGCTCGCAGTCCTACCCAAGCCGCCAGCCAGCCTTCCCTCCGTCGCGTCAGCCTCACCGGCGTCGCGTCATCATGCAGCAGCTTTCTCTTCGTAGTTTGGGTTGAGCAAGGTCGTTTCCGGTGAGCTTTGATTCAATTAAGTTTCCAGCTAGTTTTTCGAGTAATTAAGAATTTGACCCATATCGTTCAAATAAATTTCATTTTCTTTGACCTCGATCCCGGGTTTAAGTTCAAGCATTCGATCCATTTAAGTTGCTGTCCAGCAAAGGATTAGTAAATTGGGTGAGTTTTATTCTACAATTGAATCACAATCATCAATTATGTTAGTGTTCGGGATTGACTCACGATGCCCCTAACTTACTGTAGGATACCCACTAAATTTCGGCACCCTATATGCGAAGTTTCGCCAATTTATGATGTTGTCATGCCACTGTTTTGGCGTTATTGGTTGTGGTCAAGGTGGTTGGAATTTAAGAGAATTTTGGAGTAAGAATCTATTGGGTGAAACTTCCAAAGGTAAGTGACTCCCCTATCCGCATGTTGGAAGTTTACTACTTGAATGTGATTGTTGTGTGTCGGGTTAATTGAAAAATCGTTGGGTGTTAGTCTGTTTTGATGGTGGAGCATGTTGTGGAATGTTTTTATGTGAAATTTACTGTGTTGCATTCTTGTTTGTTGAGTGATGAATATGCAAATTAGGGACTTGATACTTGTTGATAAAGTCATTGGAATGAAATGAAAATATGTGTTATGTGGCATTATCTTAAGATTAGTTAGGGGACCTCATGTGCGTATGTATGACTCCTACATGATAACTAGCATTTTAAAAGTTTTGTCGTTGCGAAACTTGGTGGCATGGCCAAGAGTTTTATTAAAACTTGGCGATATGGTCAAGGTGTGGTTTTAATAATTTTCTTAAATCTTGGCGATATGGTCAAGATAATATTGATTTGAGTACTTATTATCAAAACTTGGCGATATGGCCATGAAGTCAGGTGGCCGTATGGTCACCATAAAGTTTTAGTGGTGATAAGGTCACAGTACAGTTTTCGTGGCGATATGGTCACGTTTGGCGCTATGGCCAAGAAGTAA

mRNA sequence

ATGGAGTCGTTCGCCGCCGACGATAAGTCCCCTCTCTCTTTCTCGTCTCTTTCTCCATCTCGGCCCCACTCTCTTTCTCTCTCTCTACTGTGTACAAGCCTCCGCGCGCCTCCACCGTTGATCCGCTGCAAGTCGCACACGAACGATCTCCCCGCACCGCCACGAATCCGGCCAGCCCGTGACGCTCGCAGTCCTACCCAAGCCGCCAGCCAGCCTTCCCTCCGTCGCGTCAGCCTCACCGGCGTCGCGTCATCATGCAGCAGCTTTCTCTTCGTAGTTTGGGTTGAGCAAGGTCGTTTCCGGTGGCCGTATGGTCACCATAAAGTTTTAGTGGTGATAAGGTCACAGTACAGTTTTCGTGGCGATATGGTCACGTTTGGCGCTATGGCCAAGAAGTAA

Coding sequence (CDS)

ATGGAGTCGTTCGCCGCCGACGATAAGTCCCCTCTCTCTTTCTCGTCTCTTTCTCCATCTCGGCCCCACTCTCTTTCTCTCTCTCTACTGTGTACAAGCCTCCGCGCGCCTCCACCGTTGATCCGCTGCAAGTCGCACACGAACGATCTCCCCGCACCGCCACGAATCCGGCCAGCCCGTGACGCTCGCAGTCCTACCCAAGCCGCCAGCCAGCCTTCCCTCCGTCGCGTCAGCCTCACCGGCGTCGCGTCATCATGCAGCAGCTTTCTCTTCGTAGTTTGGGTTGAGCAAGGTCGTTTCCGGTGGCCGTATGGTCACCATAAAGTTTTAGTGGTGATAAGGTCACAGTACAGTTTTCGTGGCGATATGGTCACGTTTGGCGCTATGGCCAAGAAGTAA

Protein sequence

MESFAADDKSPLSFSSLSPSRPHSLSLSLLCTSLRAPPPLIRCKSHTNDLPAPPRIRPARDARSPTQAASQPSLRRVSLTGVASSCSSFLFVVWVEQGRFRWPYGHHKVLVVIRSQYSFRGDMVTFGAMAKK
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..73

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg037043.1Spg037043.1mRNA