Spg036865 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg036865
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Retrotrans_gag domain-containing protein
Location	scaffold5: 47614879 .. 47622514 (+)
RNA-Seq Expression	Spg036865
Synteny	Spg036865

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAGGTTGTTTATTGACCGTAAATCGTTCAAGCTTTCAAAGAGTGAGTGTGGGAGGAAAGTAATGGTGGAGCGCAGAGTAGCAGAGTGGGGAAAGTGGAACTTGGGACAGGTACGGCAGTGTGGGTTCAGGACTGCTTGGTGGCAATGGCAAAAGTAGAAAACCCTAAAGGATTTTGGAGAAGAAGAATATTGGAATCGGCGGTTGTCTTCCTTTAGGGTTTAAAGGAAAGGGATGGTCTCTATTGGCGAGGGAACTACCAAGCTTGTTACCCCCCCCCCCCCCCCCGAATTCTATCTAAAAGCAAAAACCAAGTTAGGCATTTCTAAAAGGCTGAGATGCGGAGCGGGGAAAAGTCGACAAAATAGTGTTACCTAAAGGGGAAGGCAAAGTGTATCTAAGCAAAATCTGCTCATCTTCAATCATTATATAGGGGTTATGTTTAAACCCTTTTGTGTGAAACTAGACGTTGGCATTTGAGGGAGCCCGTCGAACATGGATATATTAGTTAGAGGAAATAAAGAGAGTTCGAGGGATTTATGCATCCATAAGTTAGACTTGAAGCTCATGGTCGAACGATGTCAATTAACATTCTCTGAGGGTTGGGTAACGGCTTGTAAGGCCTCCAATTATCAACACATGTGCAAGGAAGGGTAGAAGCGGAAATCCACCTCCATCTCAATATTAGTATTTATGTCTTTTTAGTATTTTGTGGATTATGCTTATTTTGGTTGTGAACTATTCTCTCTATGTTAGTGAGATAGGGTGGGAGAGTCCACCCTCTCGAATGGTGGTTAACTTCATGTGTGGATGTTAAGATTGTATTTTGTTAACTGTGTAACCGTATTTTGGTGTATCGTTAAGTGGAATCCAGAAGTATCTTATCAAAGTGGTATCAGAGCGTTCATCTTGGGGAAGACACGAGCCACGTCGCAACGCCAGATGGAAAAGTGGATGGACAATCCGAGAAGAGCGTTGAGGCCATGAAGGAAAAGAGAACATACTTCTAATACTAAACTGCCTAATTACAACTTCCACAACACTTCAGGCCAACAAAACAGACTTCGAACTCCCACAAAGCAAGTGAGTCAGGTCTCGCATGAAACACAACCTAAACCACAAAGCCAAAACCACCTAAAGCTTAAAGCGAGAAACTAGGGACCTATCTAAATATAAGCAAAATAATAAAAAAGCTAAACCACAAAGGTCATACCTCGTAAGCCTCTTCCTCAGTATCACCGGACTCACAAACTACTTGTGACACTGAAATGTTGGGGGAAAAGGGAAAGAAAGTCAATACAACTGTAGTACTGATAAGTAGTTCACACCTGGTGAGCCACCAAACATCAACCACCAAACATCAACCAACAAACATAGCACATGCATCCATCATGCTTTTCAAATGATTAAAACAAACAACATGCTTTTAAAGCGATAAATCAAACAATGCAATTCATGCTATAATATGACAGGATGACAACATGAATCCACACATCATGCTAAATGTCACGGTCATGCTTGTCCAAGGCGTGTTGCCCATGGCCGCATGCCCATGACAACCCATTCCCCTCATGCTTTCATTATATGTATTTCCTTTGTATCACTTGTTTATTTTTCCTTGCATTTCTCAAGTGTATGACTCCTCGTGATTTTCATGTTTAAGCCTGCTAAGGCTAAAATGCTTAATAATATACTATAGGGGGGTACGACTAGTTGTCAAACCTTACTACCTGGAGTTGTTTGCTATCAAGCTGTTGTTGTCCCTTTGCTTACTTGATAGTCCGTGCAACAAATATTCTTACAAAATGTTTTCAACTGTTTCCCAAAGCTTTTTCTCTAACCCCGTTTTCTAAAACCGTTTTCCAAGAACGGGGGTGGAGGTTACGAGATAGGCCCTTTGTGCCACCGGCGATCCGGAATTGAGTTGGCTGATTTACTCGTGGGCGAGAGTAAGTGCCGCACAATCGCTTGCAAGTTCGAAAAGAGCGCGATTGTGACAGTTGGTATCAGAGCCTAGTTGGCTCCTGAAGTTGAAAACATGTCGTCGACCAAGCAGTTGGCGAAGACCCACGTGGAACGTTTGGTAGAGATCGAAGAGCAGTTACTCTACCTAAGGGAAGTCCCGGATGCTATTCGGTTCGTGGAATCTCAGCTGGATGAGATTTCGACTAAAGCCGACAAAGTTGATGCGGTAGCTGGCCGCGTGGATGGGATGCCCATCCAGGAATTGATGATGAGGGTTGAGAACCTTGAAAGTAAAGTTACACGACCTGGTAGCTACGAACGTGGTGATAGCTCGTCAGGCTCTACAGCCCTGATGGAGGAGCGTGTCGATGGCTTAGACAGCTCCCAGAAAGCGATAGTCCAGATGGTTACGGACCTATCAGAGGATGTGAAAGCTGCCCTCGACGTGGTCAGGGCAGAAGTGGCGGATCTGAGCGCCAGATTAAACCTCACGATGAGAGCAGTGGGGAACCAAACCCCAGCAGGGGGTGCGGTCCAGTTCAACAAAGTTAAAGTACCCGAGCCTAAACCATTTTGTGGGGTTCGAAATGCAAAGGCTCTTGAGAATTTCATTTTTGATCTTGAACAATACTTTCGAGCGACGAACACTGTGACCGAAGAGTCAAAGATAACATTGGCTACGATGCATCTTGCAAACGATGCAAAGTTGTGGTGGAGGTCCCGATTCATGGACATCCAAGAGGGTCGTTGCACCATAGATAGTTGGGAAAAATTGAAACAAGAACTTCGTTCTCAATTTTTCCCCGAGAATGTGGAAATTTTGGCGAGGCGGAAGCTGAGAGAGCTCAAGCATACAGGAAACATCCGAGATTATGTGAAACAGTTTTCTCGATTAATGTTGGACATTCGGGATATGTCAGAGAAAGACAAAGTTTTCTGTTTTGTCGAAGGATTGAAGCCGTGGGCAAAATCCAAACTTTACGAACAGCGAGTGCAAGATCTTTCTACCGCCTATGCAGCGGCAGAGCGACTGTATCACCTCAGTAATGATCAGTCCCAAGACGTGAGACGGAATCCGAGCCCTTTTAATGGAGGAAACAGAAATAATCGGCCAGGCTCCCCCAAAAGTGGGGGAGGAGACAGACAAGGAGGGGGAGATCGTAGACCCTTCAAGCAGAGAGGCGAAAACTCGTGGCGAGGGCCACACCAACAGAACAACTACTATCAGAGGCCCCTTTCGTGCTTCATATGTAAAAGGGCCCATCGGGTGTCTGATTGCCCGAAGCGGGCAGCCCTCCAAGCTTTTCAAGCCACTTTTGACACTGACCCCGAAGTTGAAGCGGAAACCGCAGAGACTGAGGGACCACAAGCTGAAGCTGAAAAAACCCTCGAATGGGGGCACTGAAATTCCTCTCTGCCCTCCAGAAGAAAGTGGGGGAGTCCAAAGAGCCATTAGAAAGAGGACTCATGTACGTTGATGCATGGGTGAATCACAAGTCGGCCAAGAGCACGATGGTCGACTCGGGAGCCACCCATAACTTTATGACAGAAACAGAAGCGCGTCGGCTGGACTTGCGATGGGACAGAGACACAGGCAAAATGAAAGCTGTCAATTCGGCAGCCCTACCCATTATGGGGATAGCCAAGAGGGCCACAGTGAAGCTGGGTGATTCGAGTGGCCAAGCTGATTTCGTGATCGTCAAGATGGATGACTTCGACATTGTGTTGGGGATGGAGTTCCTCCTCGAACACAAGGTGATACCGATGCCCCTGGCAAAGTGTTTAGTGATCACGAGATCCAGCCCCATTGTCGTTCAGGCCAATATCAAGCAGCCAGGAGGAATAAGGATGATCTCAGCCCTTCAACTGAAGAAGGGTCTTGCTCATGAAGAACCCACCTTTATGGCCATCCCCATAGTGACAGATGAGAGTGAGAAAGAAACAGTCCCTGAAGAGATCCAATGGGTTCTAGAAGAATTTCGCGGTGTCATGCCTGACAGTTTACCGAAGAACTTGCCTCCGAGGAGAGGGATTGATCACGAAATTGAGTTGTTGCCTGGGGCAAAGCCGCCCGCCAAGAATGCCTACAGTATGGCACCTCCCGAGTTAGCAGAACTTCGAAAGCAACTTGACGAGTTACTGAATGCGGGATTCATCCGCCCAGCAAAGGCTCCCTATGGGGCCCCAGTCTTGTTCCAGAAGAAGAAAGACGAAAGTTTACGTTTGTGTATTGGTTATCGAGCGTTGAACAAACTGACTGTTCGAAACAAGTATCCTCTCCCAATCATAACAGATTTATTCGACCGCCTCCATGGGGCGAAGTACTTCTCGAAGCTGGACCTGAGATCAGGATACTACCAAGTCCGCATTGCATAAGGGGACGAGCCGAAAACATGTGTCACCCGATATGGGGCTTTCGAGTTCCTCGTTATGCCCTTTGGCCTTACCAACGCTCCGGCCACCTTCTGCACCCTGATGAATCAACTCTTTCACGAATATCTTGACAAGTTTGTGGTTGTCTATCTGGATGACATCGTTGTGTATAGCCCGACCTTGGAGGAACATCAGGCTCACCTGCAACTTGTCTTTGAAAAGTTGAAACTGAATCAGTTGTATGTAAAGAGAGAGAAGTGCTCCTTCGCGCAGAAACGTATCAATTTTCTGGGACACGTGATCGAGTGTGGTAAGATCAGTATGGAAGATGGAAAGGTCGAAGCCATACGAGACTGGAAAGTGCCATCATCAGTGACCAAGTTGCGTTCCTTTCTCGGATTAGCCAATTACTACAGGCGATTGGTGGAAGGATTCTCAAAAAGAACAAGGCCCCTGACAGACCTGTTGAAAAAGAGTAATGGCTGGAGTTGGACTTCAGCGTGTCAAACCGCCTTTGAGGACTTGAAGAAGGCGATGATGGAAGGACCCGTGCTCGGGATTGCAGATGTAAGCAAGACCTTCGAAGTCGAAACGGACGCGTCCGATTTTGCTCAGGGTGGCGTCCTCCTCCAAGACGGCCACCCCATTGCTTACAAGAGTCGAAAGTTGAATGATGCTGAACGAAGGTATGTTGCCTCCGAGAAAGAAATGCTAGCTGTTGTGCACTGTCTAAGGGCTTGGAGACAGTAACTTTTGGGAGCCAAGTTTGTAGTCAAGACCAACAATAGCTCCATCTGCCATTTCTTCAACCAACCGAGATTGTCATCCAAACAGGCGTGATGGCAAGAACTTCTCGCAGAGTTTGATTTCCAGTTCGAACACAAGCCTGGTAAGGCCAACCAAGCGGCGGACGCTTTGAGTCGGAAGAGCGAACATGCAGCCATGTGCATGTTAGCCCACTTGAAAGCGAGTAGGCTGAGTGGAACCATCAGCGAGAAAATTAAGGAACATCTGAAGAACGACATAGCAGCCCAAGCAATAATGAAGTTGGCTGAAGAAGGAAAGACTCGTCAGTTTTGGGTCGAAGACGGTTTGCTTATCCAAGGGCAACCGCCTGTATGTCCCTCGTTCGGAGAACCTCAGGAAGCTCTTAATCGAAGAATGTCACGATACTCCGTGGGCCGGCCACTCTGGGTGGCAACAAACGTATGCGCTCATCAAGCAGGGGTACTTCTGGCCAAGCCTCCGAGACGATGTAATATTGTTTACCAAGACCTGTCTCGTGTGCCAACAAGACAAGGTGGAACGAGCCAAGATAGCAGGGTTGCTGGAACCTCTGCCCGTTCCCTCAAGACCATGGGAGAGTGTATCTCTCGATTTCATCACTCATCTCCCTAAGATTGGAGAATTCAAATCAATTCTCGTGGTCGTTGACCGATTTTCGAAGTACGCCACGTTTTTTCCGACACCGAAGATGTGCTCAGCTGAGATGAGGGCACAGTTGTTTTTCAAGAATGTTGTCAAGTTATGGGGTGTACCCGAGAGTATAATTAGTGATCGAGATGCTCAATTCACTGGAACATTCTGGATAGAATTATTTAGATTACTGGGCTCTCATCTAAATATTTCCTCCAGCTACCACCCGCAGGCAGATGGCCAAACAGAGCGATTCAACAGTATGCTCGAAGAGTACTTGCGTCATTTTATTGACGCCCGACAGAGGAATTGGGCTGACATGCTTGATGTTGCTCAGTTCAGTTTCAATTGCCATAAGAGTTCAGCAACAGGAAAGACTCCGTTCAAGTTAGTATGCGGAAGACAGTCGTTGATGCCGCATGTAATTGACCATCCTTATGCGGGGAATAGTCCCCAAGCTTACAACTTCACCAAGGAGTGGAGACAGACATCAGAAATAGCCCGAGCATACTTAGAGAAGGCATCGAAGCGTATGAAAAAATGGGTCGATCAAAAACGACGGCCACTGGAATTCCAAGCAGGAGACAAAGTTCTGATCAAGCTGAGACCAGAACAGATCCAGTTCAGAGGGAAGAAAGACCAACGCCTGTCGAAGTGATCCAGAAGGTCGGTAAGACATCTTATAGGGTTCAGTTACCATCGTGGATGAAGATTCACCCTGTCATCCACGTTAATAACTCGAAGCCCTATCATCCTGACCTAGAAGACTCCGAGCGCAACGAAGTGATGCAACCCCCGGTCACAATGCAGAACCTAAATGACAAAGACGTAGAAGAGATTTTGGTAGACAGGATTCGTCGCACAGGTAAACCTCGTCAAGACGTTCAAGAGTTCCTGGTGAAGTGGAAAGGGCTCCCAGATGCTGAGATTAGTTGGGAGCGGGTTGAAGACTTGAAGTCGGCTGCCATCAAGATCGCCAAGTTCAAGCAACGTCGGTTGACAGGGACGTCAACCATTTAAGTGGGGGAGAATGTCACGATCATGCTTGTCCAAGGCGTGTTGCCCATGGCCGCATGCCCATGACAACCCATTCCCCTCATGCTTTCATTATATGTATTTCCTTTGTATCGTTTGTTTATTTTTCCTTGCATTTCTCAAGTGTATGACTCCTCGTGATTTTCATGTTTAAGCCTGCCAAGGCTAAAATGCTTAATAATATACTATAGGGGGGTACGACTAGTTGTTAAACCTTCCTACCCGGAGTTGTTTGCTATCAAGCTGTTGTTGTCCCTTTGCTTACTTGATAGTCCGTGCAACAAATATTCTTACAAAATGTTTTCAACTGTTTCCCAAAACTTTTTCTCTAACCCCGTTTTCTAAGACCGTTTGCCAAGAACGAGGGTGGAGGTTGCGAGATAGGCCCTTTGTGCCACCGGCGATCCAGAATCGAATTGGCTGACTTACTCGTGGGCGAGAGTAAGTGCCACACAATCGCTTGCGAATCCGAAAGAGTGCGATTGTGACAGTTGGTATCAGAGCCTAGTTGGCTCCTGAAGTTGAAAGCATGTCGTCGACCAAGCAGTTGGCAAAGACCCACGTGAAACGTTTGGTAGAGATCGAAGAGCAATTGCTCTACTTGAGAGAAGTCCCTGACGCTATTCGGTTTGTGGAATCTCGACTGGATGAGATTTCGACTAAAGCCAACAAAGTTGATGCGGTAGCTGGCTGCGTGGATGGAATGCCCATCCAAGAATTGATTATAAGGGTTGAGAAACTTGAAAGTAAAGTTACTCGACCTAGTAGCTACGAGCGTGGTGATAGCTCGTCGGGCTCTGCAGCCCTGATGGATGAGCGCGTCGATTGTTTGGACAACTCCTAA

mRNA sequence

ATGGGTAGGTTGTTTATTGACCGTAAATCGTTCAAGCTTTCAAAGAGTGAGTGTGGGAGGAAAGTAATGGTGGAGCGCAGAGTAGCAGAGTGGGGAAAGTGGAACTTGGGACAGGTACGGCAGTTGGAATCCAGAAGTATCTTATCAAAGTGGTATCAGAGCGTTCATCTTGGGGAAGACACGAGCCACGTCGCAACGCCAGATGGAAAAGTGGATGGACAATCCGAGAAGAGCAACGGGGGTGGAGGTTACGAGATAGGCCCTTTGTGCCACCGGCGATCCGGAATTGAGTTGGCTGATTTACTCGTGGGCGAGATTGAAAACATGTCGTCGACCAAGCAGTTGGCGAAGACCCACGTGGAACGTTTGGTAGAGATCGAAGAGCAGTTACTCTACCTAAGGGAAGTCCCGGATGCTATTCGGTTCGTGGAATCTCAGCTGGATGAGATTTCGACTAAAGCCGACAAAGTTGATGCGGTAGCTGGCCGCGTGGATGGGATGCCCATCCAGGAATTGATGATGAGGGTTGAGAACCTTGAAAGTAAAGTTACACGACCTGTTGAAAGCATGTCGTCGACCAAGCAGTTGGCAAAGACCCACGTGAAACGTTTGGTAGAGATCGAAGAGCAATTGCTCTACTTGAGAGAAGTCCCTGACGCTATTCGGTTTGTGGAATCTCGACTGGATGAGATTTCGACTAAAGCCAACAAAGTTGATGCGGTAGCTGGCTGCGTGGATGGAATGCCCATCCAAGAATTGATTATAAGGGTTGAGAAACTTGAAAGTAAAGTTACTCGACCTAGTAGCTACGAGCGTGGTGATAGCTCGTCGGGCTCTGCAGCCCTGATGGATGAGCGCGTCGATTGTTTGGACAACTCCTAA

Coding sequence (CDS)

ATGGGTAGGTTGTTTATTGACCGTAAATCGTTCAAGCTTTCAAAGAGTGAGTGTGGGAGGAAAGTAATGGTGGAGCGCAGAGTAGCAGAGTGGGGAAAGTGGAACTTGGGACAGGTACGGCAGTTGGAATCCAGAAGTATCTTATCAAAGTGGTATCAGAGCGTTCATCTTGGGGAAGACACGAGCCACGTCGCAACGCCAGATGGAAAAGTGGATGGACAATCCGAGAAGAGCAACGGGGGTGGAGGTTACGAGATAGGCCCTTTGTGCCACCGGCGATCCGGAATTGAGTTGGCTGATTTACTCGTGGGCGAGATTGAAAACATGTCGTCGACCAAGCAGTTGGCGAAGACCCACGTGGAACGTTTGGTAGAGATCGAAGAGCAGTTACTCTACCTAAGGGAAGTCCCGGATGCTATTCGGTTCGTGGAATCTCAGCTGGATGAGATTTCGACTAAAGCCGACAAAGTTGATGCGGTAGCTGGCCGCGTGGATGGGATGCCCATCCAGGAATTGATGATGAGGGTTGAGAACCTTGAAAGTAAAGTTACACGACCTGTTGAAAGCATGTCGTCGACCAAGCAGTTGGCAAAGACCCACGTGAAACGTTTGGTAGAGATCGAAGAGCAATTGCTCTACTTGAGAGAAGTCCCTGACGCTATTCGGTTTGTGGAATCTCGACTGGATGAGATTTCGACTAAAGCCAACAAAGTTGATGCGGTAGCTGGCTGCGTGGATGGAATGCCCATCCAAGAATTGATTATAAGGGTTGAGAAACTTGAAAGTAAAGTTACTCGACCTAGTAGCTACGAGCGTGGTGATAGCTCGTCGGGCTCTGCAGCCCTGATGGATGAGCGCGTCGATTGTTTGGACAACTCCTAA

Protein sequence

MGRLFIDRKSFKLSKSECGRKVMVERRVAEWGKWNLGQVRQLESRSILSKWYQSVHLGEDTSHVATPDGKVDGQSEKSNGGGGYEIGPLCHRRSGIELADLLVGEIENMSSTKQLAKTHVERLVEIEEQLLYLREVPDAIRFVESQLDEISTKADKVDAVAGRVDGMPIQELMMRVENLESKVTRPVESMSSTKQLAKTHVKRLVEIEEQLLYLREVPDAIRFVESRLDEISTKANKVDAVAGCVDGMPIQELIIRVEKLESKVTRPSSYERGDSSSGSAALMDERVDCLDNS

Homology

[Close]

BLAST of Spg036865 vs. NCBI nr
Match: XP_022155185.1 (uncharacterized protein LOC111022320 [Momordica charantia])

HSP 1 Score: 123.6 bits (309), Expect = 2.8e-24
Identity = 64/104 (61.54%), Postives = 84/104 (80.77%), Query Frame = 0


Query: 190 MSSTKQLAKTHVKRLVEIEEQLLYLREVPDAIRFVESRLDEISTKANKVDAVAGCVDGMP 249
           MS+TKQL K+H+ RLVEIEE+LL+LRE+PD +R+VESRLDEISTKA+ +D V   +DG+ 
Sbjct: 1   MSTTKQLGKSHIDRLVEIEERLLFLREIPDNLRYVESRLDEISTKADGIDVVNARIDGLA 60

Query: 250 IQELIIRVEKLESKVTRPSSYERGDSSSGSAALMDERVDCLDNS 294
           I+EL++RVE LE KV R  + ERG+SSS S A M+ERV+ +D S
Sbjct: 61  IRELMLRVETLEDKVKRTDNLERGESSSSSIAHMEERVEEIDIS 104

[Close]

BLAST of Spg036865 vs. NCBI nr
Match: XP_022150099.1 (uncharacterized protein LOC111018360 [Momordica charantia])

HSP 1 Score: 121.7 bits (304), Expect = 1.0e-23
Identity = 62/104 (59.62%), Postives = 82/104 (78.85%), Query Frame = 0


Query: 190 MSSTKQLAKTHVKRLVEIEEQLLYLREVPDAIRFVESRLDEISTKANKVDAVAGCVDGMP 249
           MS+TKQL+K+HV RLVEIEEQLLYLREVPD +R +E+R+DE S K  ++DAV   +DG+P
Sbjct: 1   MSTTKQLSKSHVDRLVEIEEQLLYLREVPDFLRLLEARVDEFSEKFGEIDAVNARIDGLP 60

Query: 250 IQELIIRVEKLESKVTRPSSYERGDSSSGSAALMDERVDCLDNS 294
           IQ++ +RVE LESK TRP S+ERGDSS+     ++ R+  L+NS
Sbjct: 61  IQDIAMRVETLESKATRPGSFERGDSSTNPNTQIEVRMGELNNS 104

[Close]

BLAST of Spg036865 vs. NCBI nr
Match: KAA0066437.1 (uncharacterized protein E6C27_scaffold21G005300 [Cucumis melo var. makuwa])

HSP 1 Score: 121.3 bits (303), Expect = 1.4e-23
Identity = 65/104 (62.50%), Postives = 80/104 (76.92%), Query Frame = 0


Query: 190 MSSTKQLAKTHVKRLVEIEEQLLYLREVPDAIRFVESRLDEISTKANKVDAVAGCVDGMP 249
           MSST   +K    RLVE+EEQ+LYL EVPD+IRF+ESRL EI+ K N +DAVAGCV+G+P
Sbjct: 1   MSSTNPSSKAQRDRLVELEEQMLYLVEVPDSIRFLESRLVEIAEKTNMIDAVAGCVEGLP 60

Query: 250 IQELIIRVEKLESKVTRPSSYERGDSSSGSAALMDERVDCLDNS 294
           IQEL+ RV+ LE  V R  +YE GDSSSG  A M+ERV+ LD+S
Sbjct: 61  IQELLARVDTLEGNVERTINYEYGDSSSGFVAHMEERVNELDSS 104

[Close]

BLAST of Spg036865 vs. NCBI nr
Match: XP_022154605.1 (uncharacterized protein LOC111021829 [Momordica charantia])

HSP 1 Score: 121.3 bits (303), Expect = 1.4e-23
Identity = 62/104 (59.62%), Postives = 82/104 (78.85%), Query Frame = 0


Query: 190 MSSTKQLAKTHVKRLVEIEEQLLYLREVPDAIRFVESRLDEISTKANKVDAVAGCVDGMP 249
           MS+TKQL+K+HV RLVEIEEQLLYLREVPD++R +E+R+DE S K  ++DAV   VDG+P
Sbjct: 1   MSATKQLSKSHVDRLVEIEEQLLYLREVPDSLRLLEARVDEFSEKFGEIDAVNARVDGLP 60

Query: 250 IQELIIRVEKLESKVTRPSSYERGDSSSGSAALMDERVDCLDNS 294
           IQ++ +RVE  ESK TRP S+ERGDSS+     ++ R+  L+NS
Sbjct: 61  IQDIAMRVETXESKATRPGSFERGDSSTNPNTQIEVRMGELNNS 104

[Close]

BLAST of Spg036865 vs. NCBI nr
Match: KAA0060138.1 (uncharacterized protein E6C27_scaffold39G00590 [Cucumis melo var. makuwa])

HSP 1 Score: 118.6 bits (296), Expect = 8.9e-23
Identity = 64/106 (60.38%), Postives = 82/106 (77.36%), Query Frame = 0


Query: 190 MSSTKQLAKTHVKRLVEIEEQLLYLREVPDAIRFVESRLDEISTKANKVDAVAGCVDGMP 249
           MSST    K    RLVE++EQ+LYL EVPD+IR++ESRLDEIS K + +D VAGCV+G+P
Sbjct: 1   MSSTNPSGKAQKDRLVELKEQMLYLVEVPDSIRYLESRLDEISEKTDTIDTVAGCVEGLP 60

Query: 250 IQELIIRVEKLESKVT--RPSSYERGDSSSGSAALMDERVDCLDNS 294
           IQEL+ RV+ LE+ ++  R  +YERGDS SG AA M+ERV+ LDNS
Sbjct: 61  IQELLTRVDILETNISVGRTVNYERGDSLSGFAAHMEERVNELDNS 106

[Close]

BLAST of Spg036865 vs. ExPASy TrEMBL
Match: A0A6J1DLQ6 (uncharacterized protein LOC111022320 OS=Momordica charantia OX=3673 GN=LOC111022320 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.3e-24
Identity = 64/104 (61.54%), Postives = 84/104 (80.77%), Query Frame = 0


Query: 190 MSSTKQLAKTHVKRLVEIEEQLLYLREVPDAIRFVESRLDEISTKANKVDAVAGCVDGMP 249
           MS+TKQL K+H+ RLVEIEE+LL+LRE+PD +R+VESRLDEISTKA+ +D V   +DG+ 
Sbjct: 1   MSTTKQLGKSHIDRLVEIEERLLFLREIPDNLRYVESRLDEISTKADGIDVVNARIDGLA 60

Query: 250 IQELIIRVEKLESKVTRPSSYERGDSSSGSAALMDERVDCLDNS 294
           I+EL++RVE LE KV R  + ERG+SSS S A M+ERV+ +D S
Sbjct: 61  IRELMLRVETLEDKVKRTDNLERGESSSSSIAHMEERVEEIDIS 104

[Close]

BLAST of Spg036865 vs. ExPASy TrEMBL
Match: A0A6J1D906 (Reverse transcriptase OS=Momordica charantia OX=3673 GN=LOC111018360 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 5.1e-24
Identity = 62/104 (59.62%), Postives = 82/104 (78.85%), Query Frame = 0


Query: 190 MSSTKQLAKTHVKRLVEIEEQLLYLREVPDAIRFVESRLDEISTKANKVDAVAGCVDGMP 249
           MS+TKQL+K+HV RLVEIEEQLLYLREVPD +R +E+R+DE S K  ++DAV   +DG+P
Sbjct: 1   MSTTKQLSKSHVDRLVEIEEQLLYLREVPDFLRLLEARVDEFSEKFGEIDAVNARIDGLP 60

Query: 250 IQELIIRVEKLESKVTRPSSYERGDSSSGSAALMDERVDCLDNS 294
           IQ++ +RVE LESK TRP S+ERGDSS+     ++ R+  L+NS
Sbjct: 61  IQDIAMRVETLESKATRPGSFERGDSSTNPNTQIEVRMGELNNS 104

[Close]

BLAST of Spg036865 vs. ExPASy TrEMBL
Match: A0A5A7VH68 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G005300 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 6.6e-24
Identity = 65/104 (62.50%), Postives = 80/104 (76.92%), Query Frame = 0


Query: 190 MSSTKQLAKTHVKRLVEIEEQLLYLREVPDAIRFVESRLDEISTKANKVDAVAGCVDGMP 249
           MSST   +K    RLVE+EEQ+LYL EVPD+IRF+ESRL EI+ K N +DAVAGCV+G+P
Sbjct: 1   MSSTNPSSKAQRDRLVELEEQMLYLVEVPDSIRFLESRLVEIAEKTNMIDAVAGCVEGLP 60

Query: 250 IQELIIRVEKLESKVTRPSSYERGDSSSGSAALMDERVDCLDNS 294
           IQEL+ RV+ LE  V R  +YE GDSSSG  A M+ERV+ LD+S
Sbjct: 61  IQELLARVDTLEGNVERTINYEYGDSSSGFVAHMEERVNELDSS 104

[Close]

BLAST of Spg036865 vs. ExPASy TrEMBL
Match: A0A6J1DK29 (uncharacterized protein LOC111021829 OS=Momordica charantia OX=3673 GN=LOC111021829 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 6.6e-24
Identity = 62/104 (59.62%), Postives = 82/104 (78.85%), Query Frame = 0


Query: 190 MSSTKQLAKTHVKRLVEIEEQLLYLREVPDAIRFVESRLDEISTKANKVDAVAGCVDGMP 249
           MS+TKQL+K+HV RLVEIEEQLLYLREVPD++R +E+R+DE S K  ++DAV   VDG+P
Sbjct: 1   MSATKQLSKSHVDRLVEIEEQLLYLREVPDSLRLLEARVDEFSEKFGEIDAVNARVDGLP 60

Query: 250 IQELIIRVEKLESKVTRPSSYERGDSSSGSAALMDERVDCLDNS 294
           IQ++ +RVE  ESK TRP S+ERGDSS+     ++ R+  L+NS
Sbjct: 61  IQDIAMRVETXESKATRPGSFERGDSSTNPNTQIEVRMGELNNS 104

[Close]

BLAST of Spg036865 vs. ExPASy TrEMBL
Match: A0A5A7UY20 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold39G00590 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 4.3e-23
Identity = 64/106 (60.38%), Postives = 82/106 (77.36%), Query Frame = 0


Query: 190 MSSTKQLAKTHVKRLVEIEEQLLYLREVPDAIRFVESRLDEISTKANKVDAVAGCVDGMP 249
           MSST    K    RLVE++EQ+LYL EVPD+IR++ESRLDEIS K + +D VAGCV+G+P
Sbjct: 1   MSSTNPSGKAQKDRLVELKEQMLYLVEVPDSIRYLESRLDEISEKTDTIDTVAGCVEGLP 60

Query: 250 IQELIIRVEKLESKVT--RPSSYERGDSSSGSAALMDERVDCLDNS 294
           IQEL+ RV+ LE+ ++  R  +YERGDS SG AA M+ERV+ LDNS
Sbjct: 61  IQELLTRVDILETNISVGRTVNYERGDSLSGFAAHMEERVNELDNS 106

The following BLAST results are available for this feature:

BLAST of Spg036865 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155185.1	2.8e-24	61.54	uncharacterized protein LOC111022320 [Momordica charantia]	[more]
XP_022150099.1	1.0e-23	59.62	uncharacterized protein LOC111018360 [Momordica charantia]	[more]
KAA0066437.1	1.4e-23	62.50	uncharacterized protein E6C27_scaffold21G005300 [Cucumis melo var. makuwa]	[more]
XP_022154605.1	1.4e-23	59.62	uncharacterized protein LOC111021829 [Momordica charantia]	[more]
KAA0060138.1	8.9e-23	60.38	uncharacterized protein E6C27_scaffold39G00590 [Cucumis melo var. makuwa]	[more]

BLAST of Spg036865 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg036865 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DLQ6	1.3e-24	61.54	uncharacterized protein LOC111022320 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1D906	5.1e-24	59.62	Reverse transcriptase OS=Momordica charantia OX=3673 GN=LOC111018360 PE=4 SV=1	[more]
A0A5A7VH68	6.6e-24	62.50	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1DK29	6.6e-24	59.62	uncharacterized protein LOC111021829 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A5A7UY20	4.3e-23	60.38	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of Spg036865 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 266..293

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg036865.1	Spg036865.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
molecular_function	GO:0003676	nucleic acid binding