Spg036196 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg036196
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	protein TAPETUM DETERMINANT 1-like
Location	scaffold5: 44078318 .. 44081566 (-)
RNA-Seq Expression	Spg036196
Synteny	Spg036196

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTATGGCTTCTCCTTCAATAAATGCGTCGAAACGAAACGATGATATCCACTTTTTGAGGATCGTGGTGTTTTGTTATTTGCAGGTATCCACGATCTCCCTCTGCCATTTTTGTCTCTCCTGGACTGAACTCTCTGCGCCATTTCGCTTTGTACGTACCTCTCTCCCTCTTCTTCTTTTCCTTTTTCTGCTTCGCTTTTTCTCTCTTACTTTTTCTTGCCTACCTCTTCTCTCTCTCTCTCGCATGGTTTTGAATATCATCCGTATTCTTCCTTTTCTGTCTCTTGTTTTCGTCCTTCTCCTTCTTCCATAACTGCCACTTCTCTTGCACCACAACACGCTTCGTTTTCGTTCCATTTCTCTGGATCACTGCTTCGCTTTTTTCCTGGTTTTCATTTTCCTTGAGAATTGGACCGGCGCGTACGCCTTGTTCCATTTATATTCCATTCGTCTTTTTCGTCCACGGCTTCTGGATTCAATCTCCTGCTTGTCGTTTCATTAATTTCGCCTACGCCTAGCGGTGGGGTTCCTGGTAAGTCTAGTCTGAGACTCTGACCGTTTGCTCAGGCTGCGACTCTTTAAGACGATGCTTCTTCTTTAAAGTCATTCAAGTTCTCAGTATATCTTCGTTTCGACGGCTCTTCTTTCTTTTGACTGATTGTGTTTTAAATGCCATCTTCTCTGATGATGTGATGTTTTCATTCTTTTTCCAACGCAGGCTTTTTAGTTTCCCCATCTGAAACTGCTCTCTTATCAAGGATCGGATTTAAACTTCCGACTCCGAGTTCCATCCCTCCGATTTCTTTCCTTCATCTGAAGTCTTACAGGATTCCTGTTGTAAATGATGAAAGCTCTATCAACAACTACTCGGAGAGCATTGGTGATTTTCGCTTCAGTTTTCTTCGTCTTCTTTTCGGTATCTGCCTTTCTTACAGGTCTGTATCATCTCTTGCACTTTATTCTCTATCTTCCGTCCATTCTTTTCGGTTTGTTTTTGCTCCGTTTTGAGTTTTTTATACTTACACATCGTCTCTCTGTACCTTTCGTTTGTCTTCTTCTATCTGTATATTTTATTTGTTTTCTTATCATTGTGCTCCTTGTCCTCCATTTCCTTTGTCTTTTTATGCTGCATATAGAAACAAAGATGTTATTCTTAATCTACTACTTTTTACATCAGTCCCTTCTTACATGATTGCAGATCTGGAAATTATTGGTTCCTTTATGGACTCGAGTCCACCTAGTTTTCTTCGATTGGGTTTAAATAAGAGCACAATAGTTGCCCCTCATCGCAAGCTTCTCCTTACTAGTAAGTTTTATTAATTCTGATTTAATCGCGTTTCGCAATCGTTCACGTAGGACTCGAATTCTGAGTTTGTTGCGCAGATTTTGTTGTTTTAAATATACGTTTGATTTTTGTTTGATTTTGGAATTATGATCTCGGGGTTGGGGGAATGGAGAGATTGTATTCTCAATTGCATAAAGGGTTGATTTGGTGTCAGAATTGCACGCCCGTCCATTCTTAGTAATGGAGCTATGGCTCACCTTTTGCTAGGGTAGCTTTCTAGCCCTTCTTCAGCTCTTTAACCTATATGGCCTTTCTGTAGCTGTTTTTGGAGAAATCTTCTTTAATAGATCCCATATTACCCACCAGGCTTTCTTCCTTTATTTGTCCACGATTCATTGATTAGATAAAAGCAACCTTTGGCCCGAAAGCGCGGAGCATTATAATGCCTTTCTGAGTTTTAGCTTTGTAGCTTCTAATTCATTCATTGCTTTACCGAAAAAGCTCTACCGTTGAGTGTGTGTATATAAAATAATTACACGATTAGCTGATGCGTGGACTCTCTTTAGTGGGATGGGTGGGGGTACGGTTTTATTAGTTTTATGTATATTCTGGACATAATTTTGAATTTTATATTTTCTAATGTCTTAACAAATTGATTGAAATTAGAAAATGCTCCCTCGCATTTTTCTTTTTCAGACTCTCTTTAGTCTATACCCCCTCTATTGCCTTTGAATTTGCTTTATCTTTTATAATTGATTATTGATGCTTTCTCAACACATCTTTATGACCTCCAGAAAGTGTATTTTGTGTGTCTGGAGACTTTTTCCCGTTGGTGGGTTGATATTTATTTAGAAGAGTAATGTTAGCACGTGGGTGGTGCCCTGAACAATGCCCAATATACGATACCAACAAATGACGTCGACCTGTTTTCTTTATTTGAATGTGTGCTTTAGGAGAAGCAACAATTGAGGAACCAACCAGAATTTGGGGTGAAAAGTGTACAAGATCAGACATTGTGATTAATCAAGGCCCCACAGCTCCACTTCCAACTGGTATTCCCACCTACACTGTGGAGGTGGTGAACGCTTGTGTCACTGGATGTGACATCTATGGCATTCACTTCAAATGTGGCTGGTTCAGCTCAGCCCACCTCATCAATCCCAGAGTTTTCAAGCGCCTTCGCTACGACGACTGCCTTGTCAACGACGGCAAGCCTCTGGTCTATGGCGGCACACTCTCTTTCCAGTATGCAAACACTTTTCCTTACCCGCTTTCCGTCTCCTCAGTTGTCTGCAACTGAAATGACACGCGCCAAACCTACTAGGAGACACTCATATGAAGCACTTGAAGCAGCAGCAGCAGGTACTTTAGTCGATTACTGATTGACAATGGCCCCCACCTGCCTTTTCTTTTCCTTTTTTTTAATTTTTTGGGTTCTGCTTTTGCTTTCTATGTGTGTGGCCTGTGGGCATTGGTTGTTTTCTGTTTCTGTTCCTACGAGTGTTTTTTTAGAGAGGTCTGATTTTTACTGTCTTCTTGAGGTTGAAGAAGGTTGTGGTTTAATAATGGTCATGACACCAACTTTGCATATACATAGATGGTGAAATAGGGAAGAATTGATAGGAACCTACTTCATTTTAAATTTTTTTTGGGGTGTGTGAGATAGGCATCGAGGGTAGGAAGGCCAACTGTATATATATAGTTATATACAATCTGATATTACGATGTTAGTGTGACAAGTTCAGGAGATTTAAAGGCATTATATGCAGAATGTTTCTCTGTTTGTTCGTTTGCCTACAGATTAATGACCCTGTCTTAATTTTTCAACCCCCCCCCCCCCTTCTCTCTCTCTCTCTCTCTCACGCGGAACACATTTGTAGCCCATGATCTATCAAATATAGTAAGAAAGCTGGTTTTTTTTTTGGTGGGTTTTGCCTTTTTCTAACATGATAGATTTCTCCC

mRNA sequence

ATGATTGCAGATCTGGAAATTATTGGTTCCTTTATGGACTCGAGTCCACCTAGTTTTCTTCGATTGGGTTTAAATAAGAGCACAATAGTTGCCCCTCATCGCAAGCTTCTCCTTACTAGAGAAGCAACAATTGAGGAACCAACCAGAATTTGGGGTGAAAAGTGTACAAGATCAGACATTGTGATTAATCAAGGCCCCACAGCTCCACTTCCAACTGGTATTCCCACCTACACTGTGGAGGTGGTGAACGCTTGTGTCACTGGATGTGACATCTATGGCATTCACTTCAAATGTGGCTGGTTCAGCTCAGCCCACCTCATCAATCCCAGAGTTTTCAAGCGCCTTCGCTACGACGACTGCCTTGTCAACGACGGCAAGCCTCTGGTCTATGGCGGCACACTCTCTTTCCAGTATGCAAACACTTTTCCTTACCCGCTTTCCGTCTCCTCAGTTGTCTGCAACTGA

Coding sequence (CDS)

ATGATTGCAGATCTGGAAATTATTGGTTCCTTTATGGACTCGAGTCCACCTAGTTTTCTTCGATTGGGTTTAAATAAGAGCACAATAGTTGCCCCTCATCGCAAGCTTCTCCTTACTAGAGAAGCAACAATTGAGGAACCAACCAGAATTTGGGGTGAAAAGTGTACAAGATCAGACATTGTGATTAATCAAGGCCCCACAGCTCCACTTCCAACTGGTATTCCCACCTACACTGTGGAGGTGGTGAACGCTTGTGTCACTGGATGTGACATCTATGGCATTCACTTCAAATGTGGCTGGTTCAGCTCAGCCCACCTCATCAATCCCAGAGTTTTCAAGCGCCTTCGCTACGACGACTGCCTTGTCAACGACGGCAAGCCTCTGGTCTATGGCGGCACACTCTCTTTCCAGTATGCAAACACTTTTCCTTACCCGCTTTCCGTCTCCTCAGTTGTCTGCAACTGA

Protein sequence

MIADLEIIGSFMDSSPPSFLRLGLNKSTIVAPHRKLLLTREATIEEPTRIWGEKCTRSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVCN

Homology

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BLAST of Spg036196 vs. NCBI nr
Match: XP_022137731.1 (protein TAPETUM DETERMINANT 1-like isoform X1 [Momordica charantia] >XP_022137732.1 protein TAPETUM DETERMINANT 1-like isoform X1 [Momordica charantia] >XP_022137733.1 protein TAPETUM DETERMINANT 1-like isoform X1 [Momordica charantia] >XP_022137734.1 protein TAPETUM DETERMINANT 1-like isoform X1 [Momordica charantia] >XP_022137735.1 protein TAPETUM DETERMINANT 1-like isoform X1 [Momordica charantia])

HSP 1 Score: 303.5 bits (776), Expect = 1.0e-78
Identity = 142/154 (92.21%), Postives = 151/154 (98.05%), Query Frame = 0


Query: 1   MIADLEIIGSFMDSSPPSFLRLGLNKSTIVAPHRKLLLTREATIEEPTRIWGEKCTRSDI 60
           ++ DL+IIGSFM+SSPPS+L LGLN +TIVAPHRKLLLT+EATIEEPTRIWGEKCT+SDI
Sbjct: 33  LLTDLDIIGSFMNSSPPSYLPLGLN-TTIVAPHRKLLLTKEATIEEPTRIWGEKCTKSDI 92

Query: 61  VINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYDDC 120
           VINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYDDC
Sbjct: 93  VINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYDDC 152

Query: 121 LVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVCN 155
           LVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVC+
Sbjct: 153 LVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVCS 185

[Close]

BLAST of Spg036196 vs. NCBI nr
Match: XP_022923940.1 (protein TAPETUM DETERMINANT 1-like [Cucurbita moschata] >XP_022923941.1 protein TAPETUM DETERMINANT 1-like [Cucurbita moschata] >XP_022923942.1 protein TAPETUM DETERMINANT 1-like [Cucurbita moschata] >XP_022923943.1 protein TAPETUM DETERMINANT 1-like [Cucurbita moschata] >KAG6584166.1 Protein TAPETUM DETERMINANT 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 300.4 bits (768), Expect = 8.7e-78
Identity = 142/153 (92.81%), Postives = 147/153 (96.08%), Query Frame = 0


Query: 1   MIADLEIIGSFMDSSPPSFLRLGLNKSTIVAPHRKLLLTREATIEEPTRIWGEKCTRSDI 60
           ++ DL+I  SFMDSSPPSFLRLGLN STI APHRKLLLTREATIEEPTRIWGEKCT+SDI
Sbjct: 28  ILTDLDIFHSFMDSSPPSFLRLGLN-STIGAPHRKLLLTREATIEEPTRIWGEKCTKSDI 87

Query: 61  VINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYDDC 120
           VINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRL YDDC
Sbjct: 88  VINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLHYDDC 147

Query: 121 LVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVC 154
           LVNDGKPLVYGGTLSFQYANT+PYPLSVSSVVC
Sbjct: 148 LVNDGKPLVYGGTLSFQYANTYPYPLSVSSVVC 179

[Close]

BLAST of Spg036196 vs. NCBI nr
Match: KAG7019756.1 (Protein TAPETUM DETERMINANT 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 300.4 bits (768), Expect = 8.7e-78
Identity = 142/153 (92.81%), Postives = 147/153 (96.08%), Query Frame = 0


Query: 1   MIADLEIIGSFMDSSPPSFLRLGLNKSTIVAPHRKLLLTREATIEEPTRIWGEKCTRSDI 60
           ++ DL+I  SFMDSSPPSFLRLGLN STI APHRKLLLTREATIEEPTRIWGEKCT+SDI
Sbjct: 66  ILTDLDIFHSFMDSSPPSFLRLGLN-STIGAPHRKLLLTREATIEEPTRIWGEKCTKSDI 125

Query: 61  VINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYDDC 120
           VINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRL YDDC
Sbjct: 126 VINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLHYDDC 185

Query: 121 LVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVC 154
           LVNDGKPLVYGGTLSFQYANT+PYPLSVSSVVC
Sbjct: 186 LVNDGKPLVYGGTLSFQYANTYPYPLSVSSVVC 217

[Close]

BLAST of Spg036196 vs. NCBI nr
Match: XP_022137736.1 (protein TAPETUM DETERMINANT 1-like isoform X2 [Momordica charantia])

HSP 1 Score: 297.0 bits (759), Expect = 9.6e-77
Identity = 141/154 (91.56%), Postives = 150/154 (97.40%), Query Frame = 0


Query: 1   MIADLEIIGSFMDSSPPSFLRLGLNKSTIVAPHRKLLLTREATIEEPTRIWGEKCTRSDI 60
           ++ DL+IIGSFM+SSPPS+L LGLN +TIVAPHRKLLLT+ ATIEEPTRIWGEKCT+SDI
Sbjct: 33  LLTDLDIIGSFMNSSPPSYLPLGLN-TTIVAPHRKLLLTK-ATIEEPTRIWGEKCTKSDI 92

Query: 61  VINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYDDC 120
           VINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYDDC
Sbjct: 93  VINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYDDC 152

Query: 121 LVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVCN 155
           LVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVC+
Sbjct: 153 LVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVCS 184

[Close]

BLAST of Spg036196 vs. NCBI nr
Match: XP_023000941.1 (protein TAPETUM DETERMINANT 1-like [Cucurbita maxima] >XP_023000942.1 protein TAPETUM DETERMINANT 1-like [Cucurbita maxima] >XP_023000943.1 protein TAPETUM DETERMINANT 1-like [Cucurbita maxima] >XP_023000944.1 protein TAPETUM DETERMINANT 1-like [Cucurbita maxima] >XP_023000945.1 protein TAPETUM DETERMINANT 1-like [Cucurbita maxima])

HSP 1 Score: 292.7 bits (748), Expect = 1.8e-75
Identity = 138/153 (90.20%), Postives = 145/153 (94.77%), Query Frame = 0


Query: 1   MIADLEIIGSFMDSSPPSFLRLGLNKSTIVAPHRKLLLTREATIEEPTRIWGEKCTRSDI 60
           ++ DL+II SFM+ SPPSFLR+ L KS I APHRKLLLTREATIEEPTRIWGEKCT+SDI
Sbjct: 28  ILTDLDIIHSFMEPSPPSFLRMDL-KSAIGAPHRKLLLTREATIEEPTRIWGEKCTKSDI 87

Query: 61  VINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYDDC 120
           VINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRL YDDC
Sbjct: 88  VINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLHYDDC 147

Query: 121 LVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVC 154
           LVNDGKPLVYGGTLSFQYANT+PYPLSVSSVVC
Sbjct: 148 LVNDGKPLVYGGTLSFQYANTYPYPLSVSSVVC 179

[Close]

BLAST of Spg036196 vs. ExPASy Swiss-Prot
Match: Q6TLJ2 (Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana OX=3702 GN=TPD1 PE=1 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 8.8e-41
Identity = 84/140 (60.00%), Postives = 98/140 (70.00%), Query Frame = 0


Query: 22  LGLNKSTIVAP---HRKLLLTREATIE-----EPTRIWGEKCTRSDIVINQGPTAPLPTG 81
           L L K+T  +P   HRK+LL    T +     EP RI GEKC  +DIV+NQ  T P+P G
Sbjct: 37  LDLTKTTTSSPSISHRKMLLLSPGTGKTERSVEPERI-GEKCKSTDIVVNQAVTEPMPNG 96

Query: 82  IPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGT 141
           IP Y VE+ N C++GC I  IH  CGWFSSA LINPRVFKR+ YDDCLVN+GKPL +G T
Sbjct: 97  IPGYMVEITNQCMSGCIISRIHINCGWFSSAKLINPRVFKRIHYDDCLVNNGKPLPFGST 156

Query: 142 LSFQYANTFPYPLSVSSVVC 154
           LSF YANTFPY LSV+ V C
Sbjct: 157 LSFHYANTFPYHLSVAFVTC 175

[Close]

BLAST of Spg036196 vs. ExPASy Swiss-Prot
Match: Q1G3T1 (TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.1e-38
Identity = 76/136 (55.88%), Postives = 101/136 (74.26%), Query Frame = 0


Query: 18  SFLRLGLNKSTIVAPHRKLLLTREATIEEPTRIWGEKCTRSDIVINQGPTAPLPTGIPTY 77
           SF+ +  N++ +    RKLLL+ +  I + T   G+ C++ DIV+ QG T PLP+G+P+Y
Sbjct: 48  SFVSINENRTAL---SRKLLLSPD--IGDGTNRIGQDCSKDDIVLFQGSTNPLPSGVPSY 107

Query: 78  TVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQ 137
           TVE+ N+CV+ C+I  IH  CGWFSS  L+NPRVF+RL YDDCLVNDG+PL  G +LSFQ
Sbjct: 108 TVEIFNSCVSDCNIAEIHVSCGWFSSVRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQ 167

Query: 138 YANTFPYPLSVSSVVC 154
           YAN+F YPLSV+SV C
Sbjct: 168 YANSFSYPLSVASVSC 178

[Close]

BLAST of Spg036196 vs. ExPASy Swiss-Prot
Match: Q2QR54 (TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1A PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 9.1e-30
Identity = 58/101 (57.43%), Postives = 73/101 (72.28%), Query Frame = 0


Query: 59  DIVINQGPTAPLPTGIPTYTVEVVNACVTG------CDIYGIHFKCGWFSSAHLINPRVF 118
           DI I QG   PLP+G+P YTV+V+N C  G      C I GIH +CGWFSS  L++PRVF
Sbjct: 119 DIAIYQGRATPLPSGVPAYTVDVMNRCAGGGGGDEECAIAGIHVRCGWFSSVSLVDPRVF 178

Query: 119 KRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVC 154
           +RL +DDCL+NDG+PL+ G T+SF+Y N+FPY LSVS   C
Sbjct: 179 RRLGHDDCLLNDGRPLLAGETVSFEYTNSFPYKLSVSVATC 219

[Close]

BLAST of Spg036196 vs. ExPASy Swiss-Prot
Match: Q8S6P9 (TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1B PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.2e-23
Identity = 46/105 (43.81%), Postives = 71/105 (67.62%), Query Frame = 0


Query: 49  RIWGEKCTRSDIVINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLIN 108
           R+  + C+  ++V+ Q     LP+GIPTY+VE++N C T C +Y +H  CG F+SA L++
Sbjct: 65  RMQPDSCSEQNVVVYQNNAEHLPSGIPTYSVEIINVC-TACTVYDVHISCGEFASAELVD 124

Query: 109 PRVFKRLRYDDCLVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVC 154
           P  F+R+ ++DCLV  G  L     +SFQY+N+F YPL+V++V C
Sbjct: 125 PSQFQRIGFNDCLVKGGGRLGPSEAVSFQYSNSFAYPLAVANVAC 168

[Close]

BLAST of Spg036196 vs. ExPASy Swiss-Prot
Match: A8MS78 (Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 7.8e-05
Identity = 28/72 (38.89%), Postives = 39/72 (54.17%), Query Frame = 0


Query: 77  YTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYD--DCLVNDGKPLVYGGTL 136
           + VEV+N C   C I  +  KC  F  + L++P   + L     +C+VNDG PL    TL
Sbjct: 48  FRVEVMNKCPM-CPIINLRLKCQGFPQS-LVDPTFLRVLSSSAGNCVVNDGLPLSPMQTL 107

Query: 137 SFQYANTFPYPL 147
           SF Y+NT  + L
Sbjct: 108 SFNYSNTHQFAL 117

[Close]

BLAST of Spg036196 vs. ExPASy TrEMBL
Match: A0A6J1C840 (protein TAPETUM DETERMINANT 1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009090 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 4.9e-79
Identity = 142/154 (92.21%), Postives = 151/154 (98.05%), Query Frame = 0


Query: 1   MIADLEIIGSFMDSSPPSFLRLGLNKSTIVAPHRKLLLTREATIEEPTRIWGEKCTRSDI 60
           ++ DL+IIGSFM+SSPPS+L LGLN +TIVAPHRKLLLT+EATIEEPTRIWGEKCT+SDI
Sbjct: 33  LLTDLDIIGSFMNSSPPSYLPLGLN-TTIVAPHRKLLLTKEATIEEPTRIWGEKCTKSDI 92

Query: 61  VINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYDDC 120
           VINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYDDC
Sbjct: 93  VINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYDDC 152

Query: 121 LVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVCN 155
           LVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVC+
Sbjct: 153 LVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVCS 185

[Close]

BLAST of Spg036196 vs. ExPASy TrEMBL
Match: A0A6J1EDD3 (protein TAPETUM DETERMINANT 1-like OS=Cucurbita moschata OX=3662 GN=LOC111431507 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 4.2e-78
Identity = 142/153 (92.81%), Postives = 147/153 (96.08%), Query Frame = 0


Query: 1   MIADLEIIGSFMDSSPPSFLRLGLNKSTIVAPHRKLLLTREATIEEPTRIWGEKCTRSDI 60
           ++ DL+I  SFMDSSPPSFLRLGLN STI APHRKLLLTREATIEEPTRIWGEKCT+SDI
Sbjct: 28  ILTDLDIFHSFMDSSPPSFLRLGLN-STIGAPHRKLLLTREATIEEPTRIWGEKCTKSDI 87

Query: 61  VINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYDDC 120
           VINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRL YDDC
Sbjct: 88  VINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLHYDDC 147

Query: 121 LVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVC 154
           LVNDGKPLVYGGTLSFQYANT+PYPLSVSSVVC
Sbjct: 148 LVNDGKPLVYGGTLSFQYANTYPYPLSVSSVVC 179

[Close]

BLAST of Spg036196 vs. ExPASy TrEMBL
Match: A0A6J1C7I8 (protein TAPETUM DETERMINANT 1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111009090 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 4.6e-77
Identity = 141/154 (91.56%), Postives = 150/154 (97.40%), Query Frame = 0


Query: 1   MIADLEIIGSFMDSSPPSFLRLGLNKSTIVAPHRKLLLTREATIEEPTRIWGEKCTRSDI 60
           ++ DL+IIGSFM+SSPPS+L LGLN +TIVAPHRKLLLT+ ATIEEPTRIWGEKCT+SDI
Sbjct: 33  LLTDLDIIGSFMNSSPPSYLPLGLN-TTIVAPHRKLLLTK-ATIEEPTRIWGEKCTKSDI 92

Query: 61  VINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYDDC 120
           VINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYDDC
Sbjct: 93  VINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYDDC 152

Query: 121 LVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVCN 155
           LVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVC+
Sbjct: 153 LVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVCS 184

[Close]

BLAST of Spg036196 vs. ExPASy TrEMBL
Match: A0A6J1KH78 (protein TAPETUM DETERMINANT 1-like OS=Cucurbita maxima OX=3661 GN=LOC111495228 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 8.7e-76
Identity = 138/153 (90.20%), Postives = 145/153 (94.77%), Query Frame = 0


Query: 1   MIADLEIIGSFMDSSPPSFLRLGLNKSTIVAPHRKLLLTREATIEEPTRIWGEKCTRSDI 60
           ++ DL+II SFM+ SPPSFLR+ L KS I APHRKLLLTREATIEEPTRIWGEKCT+SDI
Sbjct: 28  ILTDLDIIHSFMEPSPPSFLRMDL-KSAIGAPHRKLLLTREATIEEPTRIWGEKCTKSDI 87

Query: 61  VINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYDDC 120
           VINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRL YDDC
Sbjct: 88  VINQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLHYDDC 147

Query: 121 LVNDGKPLVYGGTLSFQYANTFPYPLSVSSVVC 154
           LVNDGKPLVYGGTLSFQYANT+PYPLSVSSVVC
Sbjct: 148 LVNDGKPLVYGGTLSFQYANTYPYPLSVSSVVC 179

[Close]

BLAST of Spg036196 vs. ExPASy TrEMBL
Match: A0A6J1JVY2 (protein TAPETUM DETERMINANT 1 OS=Cucurbita maxima OX=3661 GN=LOC111490188 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 3.7e-74
Identity = 137/153 (89.54%), Postives = 142/153 (92.81%), Query Frame = 0


Query: 2   IADLEIIGSFMDSSPPSFLRLGLNKSTIVAPHRKLLLTREATIEEPTRIWGEKCTRSDIV 61
           + DL IIGSFMDSSPPSFLR GL +ST V P RK LLTREA  EEPTRIWGEKCT+SDIV
Sbjct: 32  LTDLNIIGSFMDSSPPSFLRSGL-RSTRVTPRRK-LLTREAAFEEPTRIWGEKCTKSDIV 91

Query: 62  INQGPTAPLPTGIPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYDDCL 121
           INQGPTAPLPTGIPTYTVEVVNAC TGCDI+GIHFKCGWFSSAHLINPR+FKRLRYDDCL
Sbjct: 92  INQGPTAPLPTGIPTYTVEVVNACATGCDIHGIHFKCGWFSSAHLINPRIFKRLRYDDCL 151

Query: 122 VNDGKPLVYGGTLSFQYANTFPYPLSVSSVVCN 155
           VNDGKPLVYGGTLSFQYANTFPYPLSVSSVVCN
Sbjct: 152 VNDGKPLVYGGTLSFQYANTFPYPLSVSSVVCN 182

[Close]

BLAST of Spg036196 vs. TAIR 10
Match: AT4G24972.1 (tapetum determinant 1 )

HSP 1 Score: 167.9 bits (424), Expect = 6.2e-42
Identity = 84/140 (60.00%), Postives = 98/140 (70.00%), Query Frame = 0


Query: 22  LGLNKSTIVAP---HRKLLLTREATIE-----EPTRIWGEKCTRSDIVINQGPTAPLPTG 81
           L L K+T  +P   HRK+LL    T +     EP RI GEKC  +DIV+NQ  T P+P G
Sbjct: 37  LDLTKTTTSSPSISHRKMLLLSPGTGKTERSVEPERI-GEKCKSTDIVVNQAVTEPMPNG 96

Query: 82  IPTYTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGT 141
           IP Y VE+ N C++GC I  IH  CGWFSSA LINPRVFKR+ YDDCLVN+GKPL +G T
Sbjct: 97  IPGYMVEITNQCMSGCIISRIHINCGWFSSAKLINPRVFKRIHYDDCLVNNGKPLPFGST 156

Query: 142 LSFQYANTFPYPLSVSSVVC 154
           LSF YANTFPY LSV+ V C
Sbjct: 157 LSFHYANTFPYHLSVAFVTC 175

[Close]

BLAST of Spg036196 vs. TAIR 10
Match: AT1G32583.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: tapetum determinant 1 (TAIR:AT4G24972.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 159.1 bits (401), Expect = 2.9e-39
Identity = 76/136 (55.88%), Postives = 101/136 (74.26%), Query Frame = 0


Query: 18  SFLRLGLNKSTIVAPHRKLLLTREATIEEPTRIWGEKCTRSDIVINQGPTAPLPTGIPTY 77
           SF+ +  N++ +    RKLLL+ +  I + T   G+ C++ DIV+ QG T PLP+G+P+Y
Sbjct: 48  SFVSINENRTAL---SRKLLLSPD--IGDGTNRIGQDCSKDDIVLFQGSTNPLPSGVPSY 107

Query: 78  TVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYDDCLVNDGKPLVYGGTLSFQ 137
           TVE+ N+CV+ C+I  IH  CGWFSS  L+NPRVF+RL YDDCLVNDG+PL  G +LSFQ
Sbjct: 108 TVEIFNSCVSDCNIAEIHVSCGWFSSVRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQ 167

Query: 138 YANTFPYPLSVSSVVC 154
           YAN+F YPLSV+SV C
Sbjct: 168 YANSFSYPLSVASVSC 178

[Close]

BLAST of Spg036196 vs. TAIR 10
Match: AT1G05835.1 (PHD finger protein )

HSP 1 Score: 48.5 bits (114), Expect = 5.5e-06
Identity = 28/72 (38.89%), Postives = 39/72 (54.17%), Query Frame = 0


Query: 77  YTVEVVNACVTGCDIYGIHFKCGWFSSAHLINPRVFKRLRYD--DCLVNDGKPLVYGGTL 136
           + VEV+N C   C I  +  KC  F  + L++P   + L     +C+VNDG PL    TL
Sbjct: 48  FRVEVMNKCPM-CPIINLRLKCQGFPQS-LVDPTFLRVLSSSAGNCVVNDGLPLSPMQTL 107

Query: 137 SFQYANTFPYPL 147
           SF Y+NT  + L
Sbjct: 108 SFNYSNTHQFAL 117

The following BLAST results are available for this feature:

BLAST of Spg036196 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022137731.1	1.0e-78	92.21	protein TAPETUM DETERMINANT 1-like isoform X1 [Momordica charantia] >XP_02213773...	[more]
XP_022923940.1	8.7e-78	92.81	protein TAPETUM DETERMINANT 1-like [Cucurbita moschata] >XP_022923941.1 protein ...	[more]
KAG7019756.1	8.7e-78	92.81	Protein TAPETUM DETERMINANT 1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022137736.1	9.6e-77	91.56	protein TAPETUM DETERMINANT 1-like isoform X2 [Momordica charantia]	[more]
XP_023000941.1	1.8e-75	90.20	protein TAPETUM DETERMINANT 1-like [Cucurbita maxima] >XP_023000942.1 protein TA...	[more]

BLAST of Spg036196 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6TLJ2	8.8e-41	60.00	Protein TAPETUM DETERMINANT 1 OS=Arabidopsis thaliana OX=3702 GN=TPD1 PE=1 SV=1	[more]
Q1G3T1	4.1e-38	55.88	TPD1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=TDL1 PE=2 SV=1	[more]
Q2QR54	9.1e-30	57.43	TPD1 protein homolog 1A OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1A PE=1 S...	[more]
Q8S6P9	2.2e-23	43.81	TPD1 protein homolog 1B OS=Oryza sativa subsp. japonica OX=39947 GN=TDL1B PE=2 S...	[more]
A8MS78	7.8e-05	38.89	Uncharacterized protein At1g05835 OS=Arabidopsis thaliana OX=3702 GN=At1g05835 P...	[more]

BLAST of Spg036196 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C840	4.9e-79	92.21	protein TAPETUM DETERMINANT 1-like isoform X1 OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1EDD3	4.2e-78	92.81	protein TAPETUM DETERMINANT 1-like OS=Cucurbita moschata OX=3662 GN=LOC111431507...	[more]
A0A6J1C7I8	4.6e-77	91.56	protein TAPETUM DETERMINANT 1-like isoform X2 OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1KH78	8.7e-76	90.20	protein TAPETUM DETERMINANT 1-like OS=Cucurbita maxima OX=3661 GN=LOC111495228 P...	[more]
A0A6J1JVY2	3.7e-74	89.54	protein TAPETUM DETERMINANT 1 OS=Cucurbita maxima OX=3661 GN=LOC111490188 PE=4 S...	[more]

BLAST of Spg036196 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24972.1	6.2e-42	60.00	tapetum determinant 1	[more]
AT1G32583.1	2.9e-39	55.88	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT1G05835.1	5.5e-06	38.89	PHD finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040361	Tapetum determinant 1	PANTHER	PTHR33184	PROTEIN TAPETUM DETERMINANT 1-LIKE-RELATED	coord: 24..153
None	No IPR available	PANTHER	PTHR33184:SF67	PROTEIN TAPETUM DETERMINANT 1	coord: 24..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg036196.1	Spg036196.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001709	cell fate determination
cellular_component	GO:0016021	integral component of membrane