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Spg035713 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGAAATAGGTCGGGTCTATAAACCAGGGAACTAGCTAAGACGGTGAGTGACAAAATGAATTTCGAAAATTGTTTCCAACGGTTGTTCATGTTTAGATGTTTTACATGCTTTTCTATAAATGATACATGGTTTTTATGAATGGTTTCAAGCTTAAGTTATGAGCTTAGATTTTCTAATGAGATTTATAAATGAGCACGTGATTATTGAGTTTCGGAAAAATAGTTGAAACGACATCCTTTTAAGTCAAGCATGTATTAGCAAGAATTATTTAAAGATTTTCGGTTTTTCCACGAGCGAGCTGAATAAGCTTGAGTTTTACGAGAGATAACGATAAGCAGGTATGTTATAATGTTTTCATGGGATTTTATGAGATTTCTATTGACTACATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTTATATTCCGTTGTTGACGTTGAGTGTACTCCGTGACAACGATGCTGTCGTAAATGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTAGGTTGTACTGGGCGTGCCCTACACAACGAAGAACGGTCTTGTTAGTTAAAATGTTTGATGTACTTGATATGTCTTGCTAGCTTTTTTAATGACAAGCCTGCAATGTTTTTAAGAAAGCTTTTATCGTTGCACGTTTATGTTTAACGCCTTGGTTGAGCATCTTTATACGTTTAAAGTTTTATCACGTGTTCTGATTTCTGAATGTACTGTTTTAAAGTTAGTCCCTCATTGGGCTTCGTAGCTCATACTTTCAAAATTGTTTTCCACTTTCAGGTAGAGATCGAGCTCCTGGTGCCAGATACACTGTCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTATGTGGGTTGAGTTGTATATCGAGTCCGTCTATATTGTAAATGTTTTGTAAGGATTGGACAATTTAGTCCTAGAGGCCGTGGTTGTATAAACCCCATTTGTATATGTTTTTGGTTGTGAAATCTATATTAGGTTATTTTCCAAATCGAGTTATGTCAGGGCTGCACCTCGTGTATATTAGAAGGTTTTCACGGATTCCTCTGTGTTGTGTTTCATGTGGAATGTTTTATATCTAAGATTAGTATGTTTATCAGGTTCTACGTTTTAGGAGGGTCAACAGGTATCGTTAGAGAAGGACGATGTTCGTTGGCTTCACGCCATCTTCCGGACTAAGCTAGCAGGTGGTCTGGGCGGGGGTGTGACAACAAGTGCAATACTTGTGGTGGTGTTCGTGCAGAAAGTTGCAGCAAAAAGGATCTCATTAGCTTGCTGTATTTTCCTGAGATTTGGTGATTTTCGATCAAGAACGTCCACGAAAGTGAGTATTTCGGTTCTTGATGAATAGGATTAATATATCTAGATTAGATCTAGGTTTACTTCTATATTTTGCATGTTTTATAACTGTTGTACAGTAGTTCTATGTTGATTTTACTGCTGTGTATGTTTTTTCCATCGTATTGGTATCCTAATCGACGTTTAATTCGATTAGGTCCTTTGAAATCTTCCGCTGCCTAGGGCTATTGGCTGTTTGGAGATTTGCGATTGGCTATGATAGGTGGGATTAATTGCATATTGTATGTATTATTTGCGATAAACTGTTTAGGTTTAATTGGCCTTAGTTTTTATGAATTTTTGATGTGATCAAGTGTAACGGCCCCTATGTTTTTGGGCATGAATTCATGAAAATCGAGTCTGTACAGTCCGAGTCTAGATTAGGCTTGAAGATCGGTGAAAATCGCGGCGGAGATCGACTAATTTCGTGAAGAACAGTCGCGGATCTGCCCAGTTTTTGGCTCCAGACGCAACAGCGTCGGGTCGCTTGGCTTTGCTCGTCTCGACACTGTCGCGATTTCACGCTACGGATGGTTGAAATCGCGCCAGCATTGGGACGCTGTTCCTTAAGCATCTCGACTCTGTCGTGA ATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTAGGTTGTACTGGGCGTGCCCTACACAACGAAGAACGGTCTTGTAGAGATCGAGCTCCTGGTGCCAGATACACTGAGGGTCAACAGGTATCGTTAGAGAAGGACGATGTTCGTTGGCTTCACGCCATCTTCCGGACTAAGCTAGCAGGTGGTCTGGGCGGGGGTGTGACAACAAGTGCAATACTTGTGGTGGTGTTCGTGCAGAAAGTTGCAGCAAAAAGGATCTCATTAGCTTGCTGTATTTTCCTGAGATTTGGTGATTTTCGATCAAGAACGTCCACGAAAACGCAACAGCGTCGGGTCGCTTGGCTTTGCTCGTCTCGACACTGTCGCGATTTCACGCTACGGATGGTTGAAATCGCGCCAGCATTGGGACGCTGTTCCTTAAGCATCTCGACTCTGTCGTGA ATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTAGGTTGTACTGGGCGTGCCCTACACAACGAAGAACGGTCTTGTAGAGATCGAGCTCCTGGTGCCAGATACACTGAGGGTCAACAGGTATCGTTAGAGAAGGACGATGTTCGTTGGCTTCACGCCATCTTCCGGACTAAGCTAGCAGGTGGTCTGGGCGGGGGTGTGACAACAAGTGCAATACTTGTGGTGGTGTTCGTGCAGAAAGTTGCAGCAAAAAGGATCTCATTAGCTTGCTGTATTTTCCTGAGATTTGGTGATTTTCGATCAAGAACGTCCACGAAAACGCAACAGCGTCGGGTCGCTTGGCTTTGCTCGTCTCGACACTGTCGCGATTTCACGCTACGGATGGTTGAAATCGCGCCAGCATTGGGACGCTGTTCCTTAAGCATCTCGACTCTGTCGTGA MGVLGGPHYIVGLVNVGCTGRALHNEERSCRDRAPGARYTEGQQVSLEKDDVRWLHAIFRTKLAGGLGGGVTTSAILVVVFVQKVAAKRISLACCIFLRFGDFRSRTSTKTQQRRVAWLCSSRHCRDFTLRMVEIAPALGRCSLSISTLS Homology
BLAST of Spg035713 vs. NCBI nr
Match: KAA0046503.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK01915.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 76.3 bits (186), Expect = 2.6e-10 Identity = 40/77 (51.95%), Postives = 50/77 (64.94%), Query Frame = 0
BLAST of Spg035713 vs. NCBI nr
Match: TYK08801.1 (hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa]) HSP 1 Score: 74.3 bits (181), Expect = 9.8e-10 Identity = 44/108 (40.74%), Postives = 53/108 (49.07%), Query Frame = 0
BLAST of Spg035713 vs. NCBI nr
Match: TYK02142.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 66.6 bits (161), Expect = 2.0e-07 Identity = 37/75 (49.33%), Postives = 46/75 (61.33%), Query Frame = 0
BLAST of Spg035713 vs. ExPASy TrEMBL
Match: A0A5D3BRV3 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3741G00040 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 1.3e-10 Identity = 40/77 (51.95%), Postives = 50/77 (64.94%), Query Frame = 0
BLAST of Spg035713 vs. ExPASy TrEMBL
Match: A0A5D3CAC6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold796G00040 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 4.8e-10 Identity = 44/108 (40.74%), Postives = 53/108 (49.07%), Query Frame = 0
BLAST of Spg035713 vs. ExPASy TrEMBL
Match: A0A5D3BTL2 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold388G00270 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 9.9e-08 Identity = 37/75 (49.33%), Postives = 46/75 (61.33%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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